Internal reports

1. Frédéric Blanqui, Anne Canteaut, Hidde De Jong, Sébastien Imperiale, Nathalie Mitton, Guillaume Pallez, Xavier Pennec, Xavier Rival, and Bertrand Thirion. Recommendations on ''Grey-Zone Publishers''. Technical report, Inria, January 2023. [bibtex-entry]



2. Frédéric Blanqui, Anne Canteaut, Hidde de Jong, Sébastien Imperiale, Nathalie Mitton, Guillaume Pallez, Xavier Pennec, Xavier Rival, and Bertrand Thirion. Recommandations sur les `` éditeurs de la zone grise ''. Technical report, Inria, January 2023. [bibtex-entry]

1. Santiago Silva, Boris Gutman, Eduardo Romero, Paul M. Thompson, Andre Altmann, and Marco Lorenzi. Federated learning in Distributed Medical Databases: Meta-Analysis of Large-Scale Subcortical Brain Data (Supplementary Material). Research Report, Inria & Université Cote d'Azur, CNRS, I3S, Sophia Antipolis, France, October 2018. [bibtex-entry]

1. Marine Breuilly, Kaouthar Chatti, Jacques Darcourt, Philippe Franken, Julien Guglielmi, Grégoire Malandain, and Thierry Pourcher. From extraction of physiological features with dynamic $\mu$-SPECT imaging to modelling of iodide biodistribution in stomach. Research Report, Inria Sophia Antipolis, August 2015. [bibtex-entry]

1. Martin Bauer, Martins Bruveris, Philipp Harms, Boris Khesin, Stephen Marsland, Peter Michor, Klas Modin, Olaf Müller, Xavier Pennec, Stefan Sommer, and François-Xavier Vialard. Math in the Cabin - Shape Analysis Workshop in Bad Gastein. Research Report, Brunel University London ; University of Vienna, July 2014. [bibtex-entry]

1. Hugo Talbot, Federico Spadoni, Maxime Sermesant, Nicholas Ayache, and Hervé Delingette. Deliverable D10.4.2. Research Report, January 2013. [bibtex-entry]

1. Martin W. Krueger, Jatin Relan, Zhong Chen, Maxime Sermesant, Nicholas Ayache, Gunnar Seemann, Olaf Dössel, Nick Linton, C. Aldo Rinaldi, Reza Razavi, Kawal Rhode, and Hervé Delingette. Evaluation of RFA planning based on biophysical models. Deliverables D6.3.3, European project euHeart, May 2012. [bibtex-entry]

1. Barbara André, Tom Vercauteren, M. Buchner, Anna, B. Wallace, Michael, and Nicholas Ayache. Learning Semantic and Visual Similarity for Endomicroscopy Video Retrieval. Rapport de recherche RR-7722, INRIA, August 2011. Keyword(s): probe-based Confocal Laser Endomicroscopy (pCLE), Content- Based Image Retrieval (CBIR), Bag-of-Visual-Words (BoW) method, semantic learning, similarity distance learning. [Abstract] [bibtex-entry]



2. M. W. Krueger, J. Relan, H. Delingette, W. Schulze, G. Seemann, and O. Dössel. Model Personalization for AF and VT simulations. Deliverables D6.2.2, European project euHeart, January 2011. [bibtex-entry]



3. M. W. Krueger, W. Schulze, G. Seemann, O. Dössel, J. Relan, H. Delingette, M. Sermesant, and N. Ayache. Planning of Radiofrequency Ablation for patients with Atrial Fibrillation. Deliverables D6.3.1, European project euHeart, June 2011. [bibtex-entry]



4. J. Relan, H. Delingette, M. Sermesant, N. Ayache, M. W. Krueger, W. Schulze, G. Seemann, and O. Dössel. Planning of RadioFrequency Ablation for patients with Ventricular Tachycardia. Deliverables D6.3.2, European project euHeart, June 2011. [bibtex-entry]

1. M. W. Krueger, J. Relan, H. Delingette, M. Sermesant, N. Ayache, G. Seemann, and O. Dössel. Computational Models for AF and VT simulation. Deliverables D6.2.1, European project euHeart, May 2010. [bibtex-entry]



2. Xavier Pennec, Curzio Basso, Younes Boudjemline, Stanley Durrleman, Ender Konukoglu, Tommaso Mansi, Kristin McLeod, Giacomo Pongiglione, Matteo Santoro, Maxime Sermesant, Bertrand Stos, Nicolas Toussaint, and Gianluca Trocchio. Third generation disease models: Image analysis tools, pediatric heart diseases, inflammatory diseases and brain tumors. Deliverables D11.4, European project Health-e-Child (IST-2004-027749), April 2010. [bibtex-entry]

1. Stanley Durrleman, Xavier Pennec, Guido Gerig, Alain Trouvé, and Nicholas Ayache. Spatiotemporal Atlas Estimation for Developmental Delay Detection in Longitudinal Datasets. Research report RR-6952, INRIA, 2009. [bibtex-entry]

1. Stanley Durrleman, Xavier Pennec, Alain Trouvé, and Nicholas Ayache. Sparse Approximation of Currents for Statistics on Curves and Surfaces. Research report RR-6571, INRIA, June 2008. [bibtex-entry]

1. Pierre Fillard, Xavier Pennec, Paul M. Thompson, and Nicholas Ayache. Evaluating Brain Anatomical Correlations via Canonical Correlation Analysis of Sulcal Lines. Research report RR-6241, INRIA, 07 2007. [bibtex-entry]



2. Jean Gallier. Notes on Convex Sets, Polytopes, Polyhedra Combinatorial Topology, Voronoi Diagrams and Delaunay Triangulations. Research report RR-6379, INRIA Sophia-Antipolis, 2007. [bibtex-entry]



3. Xavier Pennec, Curzio Basso, Younes Boudjemline, Stanley Durrleman, Ender Konukoglu, Tommaso Mansi, Giacomo Pongiglione, Matteo Santoro, Maxime Sermesant, Bertrand Stos, Nicolas Toussaint, and Gianluca Trocchio. First generation disease models: Image analysis tools, pediatric heart diseases, inflammatory diseases and brain tumors. Deliverables D11.2, European project Health-e-Child (IST-2004-027749), June 2007. [bibtex-entry]

1. Vincent Arsigny, Olivier Commowick, Xavier Pennec, and Nicholas Ayache. A Fast and Log-Euclidean Polyaffine Framework for Locally Affine Registration. Research report RR-5865, INRIA Sophia-Antipolis, March 2006. Keyword(s): Polyaffine transformations, Diffeomorphisms, Non-rigid registration, Multi-affine registration, Lie groups, Log-Euclidean metrics, Magnetic Resonance Imaging. [bibtex-entry]



2. Vincent Arsigny, Xavier Pennec, and Nicholas Ayache. Bi-invariant Means in Lie Groups. Application to Left-invariant Polyaffine Transformations. Research report RR-5885, INRIA Sophia-Antipolis, April 2006. Keyword(s): Bi-invariant means, Fréchet means, Statistics, Lie groups, Riemannian geometry, Polyaffine transformations, Diffeomorphisms. [bibtex-entry]



3. Pierre Fillard, Vincent Arsigny, Xavier Pennec, Kiralee M. Hayashi, Paul M. Thompson, and Nicholas Ayache. Measuring Brain Variability by Extrapolating Sparse Tensor Fields Measured on Sulcal Lines. Research report RR-5887, INRIA, April 2006. [bibtex-entry]



4. Tristan Glatard, Johan Montagnat, and Xavier Pennec. Optimizing jobs timeouts on clusters and production grids. Technical report I3S/RR-2006-35-FR, I3S, 2006. [bibtex-entry]



5. Tristan Glatard, Johan Montagnat, Xavier Pennec, David Emsellem, and Diane Lingrand. MOTEUR: a data-intensive service-based workflow manager. Technical report I3S/RR-2006-07-FR, I3S RAINBOW team, Univ. Nice-Sophia-Antipolis, March 2006. [bibtex-entry]



6. Martin Huber, Xavier Pennec, Alessandro Verri, Harry Dimitropoulos, Maxime Sermesant, Cristian Mircean, Sonja Zilner, Homer Metaxas, Michael Lynch, Ender Konukoglu, Maria-Luisa Garre, Anna Charisi, Curzio Basso, and Elise Arnaud. State of the art report on disease models, decision support systems and knwoledge discovery for pediatric oncology, cardiology and rheumatology. Deliverables 11.1, 12.1, 13.1, European project Health-e-Child (IST-2004-027749), June 2006. [bibtex-entry]



7. Jean-Marc Peyrat, Maxime Sermesant, Hervé Delingette, Xavier Pennec, Chenyang Xu, Elliot McVeigh, and Nicholas Ayache. Towards a Statistical Atlas of Cardiac Fiber Architecture. Research report RR-5906, INRIA, May 2006. Keyword(s): DT-MRI, DTI, Diffusion Tensor, Log-Euclidean, Cardiac Fiber, Heart, Myocardium, Atlas. [bibtex-entry]

1. Vincent Arsigny, Pierre Fillard, Xavier Pennec, and Nicholas Ayache. Fast and Simple Computations on Tensors with Log-Euclidean Metrics. Research report RR-5584, INRIA, Sophia-Antipolis, France, May 2005. Keyword(s): DT-MRI, Magnetic Resonance Imaging, Tensors, brain, Riemannian geometry, Lie group, regularization, extrapolation, interpolation. [bibtex-entry]



2. Jonathan Boisvert. Système de navigation 3D pour les chirurgies minimalement invasives du rachis. Research Report (Candidacy Examination Report), École Polytechnique de Montréal, 2005. [bibtex-entry]



3. Pierre Fillard, Vincent Arsigny, Xavier Pennec, and Nicholas Ayache. Joint Estimation and Smoothing of Clinical DT-MRI with a Log-Euclidean Metric. Research report RR-5607, INRIA, Sophia-Antipolis, France, June 2005. Keyword(s): tensors, DT-MRI, DTI, estimation, regularization, fiber tracking, Log-Euclidean, Riemannian geometry. [bibtex-entry]



4. Céline Fouard, Grégoire Malandain, Steffen Prohaska, and Malte Westerhoff. Blockwise processing applied to brain micro-vascular network study. Research report RR-5581, INRIA, 2005. Keyword(s): image mosaic, digital topology, chamfer map, medial axis, skeleton, topological thinning. [Abstract] [bibtex-entry]



5. Tristan Glatard, Johan Montagnat, and Xavier Pennec. An optimized workflow enactor for data-intensive grid applications. Technical report I3S/RR-2005-32, Nice-Sophia-Antipolis University, I3S Lab, RAINBOW project, 2005. [bibtex-entry]



6. Grégoire Malandain and Céline Fouard. On optimal chamfer masks and coefficients. Research report RR-5566, INRIA, 2005. Keyword(s): Chamfer distance, anisotropic lattice, Farey triangulation. [Abstract] [bibtex-entry]

1. Christophe Blondel, Grégoire Malandain, Régis Vaillant, and Nicholas Ayache. Reconstruction of Coronary Arteries from One Rotational X-Ray Projection Sequence. Research report RR-5214, INRIA, May 2004. Keyword(s): Coronary angiography, Stereovision, Motion Analysis, Tomography. [bibtex-entry]



2. Olivier Clatz, Pierre-Yves Bondiau, Hervé Delingette, Maxime Sermesant, Simon Warfield, Grégoire Malandain, and Nicholas Ayache. Brain Tumor Growth Simulation. Research report RR-5187, INRIA, 2004. Keyword(s): tumor, model, glioblastoma, brain, Magnetic Resonance Imaging, growth, model, simulation, finite element, biomechanics, diffusion, infiltration, mass effect, Clinical Target Volume, Gross Tumor Volume. [bibtex-entry]



3. M.G. Linguraru, M. A. González Ballester, E. Bardinet, D. Galanaud, D. Dormont, J.-P. Brandel, and N. Ayache. Automated Analysis of Basal Ganglia Intensity Distribution in Multisequence MRI of the Brain - Application to Creutzfeldt-Jakob Disease. Research Report RR-5276, INRIA, 2004. [bibtex-entry]



4. V. Moreau-Villéger, H. Delingette, M. Sermesant, O. Faris, E. McVeigh, and N. Ayache. Global and Local Parameter Estimation of a Model of the Electrical Activity of the Heart. Research Report RR-5269, INRIA, July 2004. Keyword(s): heart modeling, electrophysiology, inverse problem, data assimilation, parameter estimation, FitzHugh-Nagumo. [bibtex-entry]



5. Xavier Pennec. Probabilities and Statistics on Riemannian Manifolds: A Geometric approach. Research report RR-5093, INRIA, January 2004. Note: An extended version will appear in the International Journal of Mathematical Imaging and Vision. Keyword(s): statistics, geometry, Riemannian geometry. [bibtex-entry]



6. Xavier Pennec, Pierre Fillard, and Nicholas Ayache. A Riemannian Framework for Tensor Computing. Research report RR-5255, INRIA, July 2004. Note: Published in International Journal of Computer Vision 65(1), October 2005. Keyword(s): Tensors, regularization, PDE, geometry, Riemannian geometry. [bibtex-entry]



7. Mauricio Reyes Aguirre, Grégoire Malandain, and Jacques Darcourt. Respiratory Movement Correction in Emission Tomography. Research report RR-5279, INRIA, July 2004. Keyword(s): image reconstruction, respiratory movement, MLEM, nuclear medicine, emission tomography. [bibtex-entry]



8. M. Sermesant, H. Delingette, and N. Ayache. An Electromechanical Model of the Myocardium for Cardiac Image Analysis and Medical Simulation. Research Report RR-5395, INRIA, November 2004. Note: Submitted to the IEEE Trans. in Medical Imaging. Keyword(s): Heart, simulation, physiology, biomechanics. [bibtex-entry]

1. Vincent Arsigny, Xavier Pennec, and Nicholas Ayache. A novel family of geometrical transformations: Polyrigid transformations. Application to the registration of histological slices. Research report RR-4837, INRIA, 2003. Keyword(s): registration, matching, histology. [bibtex-entry]



2. E. Bardinet and G. Malandain. Fusion of autoradiographies with an MR volume using 2-D and 3-D linear transformations. Research report RR-4791, INRIA, 2003. Keyword(s): autoradiography, histology, MRI, matching, fusion. [bibtex-entry]



3. Céline Fouard and Grégoire Malandain. Automatic calculation of chamfer mask coefficients for large masks and anisotropic images. Research report RR-4792, INRIA, 2003. Keyword(s): image analysis, chamfer distance, norm constraint, anisotropic lattice, Farey triangulation. [Abstract] [bibtex-entry]



4. Stéphane Nicolau, Xavier Pennec, Luc Soler, and Nicholas Ayache. Validation of a New 3D/2D Registration Criterion including Error Prediction. Application to Image Guided Radio-Frequency Ablation of the Liver Tumors. Research report RR-4993, INRIA, 2003. Keyword(s): Augmented Reality, 3D/2D Registration, Uncertainty Prediction, Tumors Liver Radio-frequencies Ablation. [bibtex-entry]



5. Alain Pitiot, Eric Bardinet, P. M. Thompson, and G. Malandain. Automated Piecewise Affine Registration of Biological Images. Research report RR-4866, INRIA, July 2003. Keyword(s): registration, matching, clustering, histology, MRI. [Abstract] [bibtex-entry]

1. Sébastien Granger and Xavier Pennec. Statistiques exactes et approchées sur les normales aléatoires. Research report RR-4533, INRIA, 2002. Keyword(s): reconstruction, uncertainty, surface, random normals. [bibtex-entry]



2. P. Kornprobst, R. Peeters, T. Vieville, G. Malandain, S. Mierisova, S. Sunaert, O. Faugeras, and P. Van Hecke. Superresolution in MRI and its influence in statistical analysis. Research report RR-4513, INRIA, July 2002. Keyword(s): Superresolution, MRI, anisotropic diffusion, half-quadratic minimization. [bibtex-entry]



3. Xavier Pennec, Radu Stefanescu, and Eric Bardinet. Rapport d'étude de l'action CNES ``R&T Mise en correspondance''. Technical report, INRIA, October 2002. [bibtex-entry]

1. P. Cachier and N. Ayache. Regularization in Image Non-Rigid Registration: I. Trade-Off between Smoothness and Similarity. Research report RR-4188, INRIA, 2001. Keyword(s): Deformations, registration, matching. [bibtex-entry]



2. P. Cachier and N. Ayache. Regularization in Image Non-Rigid Registration: II. Isotropic Energies, Filters, and Splines. Research report RR-4243, INRIA, 2001. Keyword(s): Deformations, registration, matching. [bibtex-entry]



3. Sébastien Granger, Xavier Pennec, and Alexis Roche. Rigid Point-Surface Registration using Oriented Points and an EM variant of ICP for Computer Guided Oral Implantology. Research report RR-4169, INRIA, 2001. Note: Published in MICCAI'01, Utrecht, Netherlands, LNCS 2208, p.752-761. Keyword(s): registration, matching, odontology, validation, uncertainty, surface. [bibtex-entry]



4. Grégoire Malandain and Jean-Daniel Boissonnat. Computing the Diameter of a Point Set. Research report RR-4233, INRIA, Sophia-Antipolis, July 2001. Keyword(s): computational geometry. [bibtex-entry]



5. Sébastien Ourselin, Xavier Pennec, Radu Stefanescu, Grégoire Malandain, and Nicholas Ayache. Robust Registration of Multi-Modal Medical Images: Towards Real-Time Clinical Applications. Research report RR-4333, INRIA, 2001. Keyword(s): registration, matching, real time, parallelism, magnetic resonance. [bibtex-entry]

1. H. Delingette and J. Montagnat. Topology and Shape Constraints on Parametric Active Contours. Research report RR-3880, INRIA, 2000. Keyword(s): tech-report, reconstruction. [bibtex-entry]



2. J. Montagnat and H. Delingette. Spatial and Temporal Shape Constrained Deformable Surfaces for 3D and 4D Medical Image Segmentation. Research report RR-4078, INRIA, 2000. Keyword(s): tech-report, reconstruction. [bibtex-entry]



3. J. Montagnat, H. Delingette, N. Scapel, and N. Ayache. Representation, Shape, Topology and Evolution of Deformable Surfaces. Application to 3D Medical Image Segmentation. Research report RR-3954, INRIA, 2000. Keyword(s): tech-report, reconstruction. [bibtex-entry]



4. Xavier Pennec and Pascal Cachier. NT2: Non-Rigid tracking US/US, second generation (Roboscope MMIT deliverable 26). Technical report, European project Roboscope, May 2000. Keyword(s): registration, matching, motion tracking, ultrasound, deformations. [bibtex-entry]



5. Xavier Pennec, Pascal Cachier, and Nicholas Ayache. Tracking Brain Deformations in Time-Sequences of 3D US Images. Research report RR-4091, INRIA, December 2000. Keyword(s): registration, matching, motion tracking, ultrasound, deformations. [bibtex-entry]



6. Xavier Pennec and Alexis Roche. NM2: Non-Rigid matching MR/US second generation (Roboscope MMIT deliverable 25). Technical report, European project Roboscope, April 2000. Keyword(s): registration, matching, multimodal, magnetic resonance, ultrasound. [bibtex-entry]



7. G. Picinbono, H. Delingette, and N. Ayache. Improving Realism of a Surgery Simulator : Linear Anisotropic Elasticity, Complex Interactions and Force Extrapolation. Research report RR-4018, INRIA, 2000. Keyword(s): tech-report, simulation. [bibtex-entry]



8. G. Picinbono, H. Delingette, and N. Ayache. Non-Linear Anisotropic Elasticity for Real-Time Surgery Simulation Real-time elastic deformations of soft tissues for surgery simulation. Research report RR-4028, INRIA, 2000. Keyword(s): tech-report, simulation. [bibtex-entry]



9. S. Prima and N. Ayache. Investigating Different Modelings of the Imaging Process for Maximum Likelihood Estimation of the Bias Field in MR Images. Technical report, INRIA, 2000. [bibtex-entry]



10. Alexis Roche, Xavier Pennec, Grégoire Malandain, Nicholas Ayache, and Sébastien Ourselin. Generalized Correlation Ratio for Rigid Registration of 3D Ultrasound with MR Images. Research report RR-3980, INRIA, July 2000. Note: Published in IEEE TMI 20(10), oct. 2001, p. 25-31. Keyword(s): registration, matching, multimodal, magnetic resonance, ultrasound, correlation ratio. [bibtex-entry]

1. Pascal Cachier, Xavier Pennec, and Nicholas Ayache. Fast Non-Rigid Matching by Gradient Descent: Study and Improvements of the Demons Algorithm. Research report RR-3706, INRIA, June 1999. Keyword(s): registration, matching, deformations. [bibtex-entry]



2. A. Guimond, J. Meunier, and J.-P. Thirion. Average Brain Models: A Convergence Study. Research report RR-3731, INRIA, Sophia-Antipolis, France, July 1999. [bibtex-entry]



3. Alexandre Guimond, Alexis Roche, Nicholas Ayache, and Jean Meunier. Multimodal Brain Warping Using the Demons Algorithm and Adaptative Intensity Corrections. Research report RR-3796, INRIA, 1999. Keyword(s): registration, matching, deformations, multimodal. [bibtex-entry]



4. K. Krissian, G. Malandain, N. Ayache, R. Vaillant, and Y. Trousset. Model Based Detection of Tubular Structures in 3D Images. Research report RR-3736, INRIA, July 1999. Keyword(s): vessels, multiscale analysis, centerline detection. [bibtex-entry]



5. Xavier Pennec. AdV: Adapted viewing tools for the user interface (Roboscope MMIT deliverable 13). Technical report, European project Roboscope, September 1999. [bibtex-entry]



6. Xavier Pennec. CoR1: Co-registration tools for MR/Robot (Roboscope MMIT deliverable 12). Technical report, European project Roboscope, April 1999. [bibtex-entry]



7. Xavier Pennec. RM1: Rigid matching tools for MR images (Roboscope MMIT deliverable 11). Technical report, European project Roboscope, April 1999. [bibtex-entry]



8. Xavier Pennec and Pascal Cachier. NT1: Non-Rigid tracking US/US, first generation (Roboscope MMIT deliverable 19). Technical report, European project Roboscope, December 1999. [bibtex-entry]



9. S. Prima, S. Ourselin, and N. Ayache. Computation of symmetry planes in 3D medical images. Research report RR-3841, INRIA, December 1999. [bibtex-entry]



10. A. Roche, G. Malandain, and N. Ayache. Unifying Maximum Likelihood Approaches in Medical Image Registration. Research report RR-3741, INRIA, July 1999. [bibtex-entry]



11. Alexis Roche and Xavier Pennec. NM1: Non-Rigid matching MR/US first generation (Roboscope MMIT deliverable 18). Technical report, European project Roboscope, September 1999. [bibtex-entry]



12. Marie-Laure Tabary, Nicholas Ayache, Jacques Darcourt, and Grégoire Malandain. Analyse statistique d'images médicales : étude et utilisation du logiciel SPM. Research report RR-3802, INRIA, November 1999. [bibtex-entry]

1. S. Cotin, H. Delingette, and N. Ayache. Efficient Linear Elastic Models of Soft Tissues for real-time surgery simulation. Research report RR-3510, INRIA, 1998. Keyword(s): tech-report, reconstruction. [bibtex-entry]



2. S. Cotin, H. Delingette, and N. Ayache. Real-time elastic deformations of soft tissues for surgery simulation. Research report RR-3511, INRIA, 1998. Keyword(s): tech-report, simulation. [bibtex-entry]



3. J. Declerck, N. Ayache, and E.R. McVeigh. Use of a 4D planispheric transformation for the tracking and the analysis of LV motion with tagged MR images. Research report RR-3535, INRIA, October 1998. [bibtex-entry]



4. H. Delingette. Towards Realistic Soft Tissue Modeling in Medical Simulation. Research report RR-3506, INRIA, 1998. Keyword(s): tech-report, reconstruction. [bibtex-entry]



5. K. Krissian, G. Malandain, and N. Ayache. Model Based Multiscale Detection and Reconstruction of 3D Vessels. Research report RR-3442, INRIA, March 1998. [bibtex-entry]



6. Sébastien Ourselin, Alexis Roche, Gérard Subsol, Xavier Pennec, and Christophe Sattonnet. Automatic Alignment of Histological Sections for 3D Reconstruction and Analysis. Research report RR-3595, INRIA, December 1998. Keyword(s): registration, histology. [bibtex-entry]



7. Xavier Pennec. Computing the mean of geometric features - Application to the mean rotation. Research report RR-3371, INRIA, March 1998. Keyword(s): statistics, geometry, uncertainty. [bibtex-entry]



8. Xavier Pennec. Registration of Uncertain Geometric Features: Estimating the Pose and its Accuracy. Technical report AIM-1623, MIT Artificial Intelligence Lab, January 1998. Keyword(s): registration, matching, uncertainty, geometry, validation, statistics. [bibtex-entry]



9. Xavier Pennec. Toward a generic framework for recognition based on uncertain geometric features. Memo AIM-1622, MIT Artificial Intelligence Lab, January 1998. Note: Published in Videre 1(2), 1998, p.58-87. Keyword(s): registration, matching, uncertainty. [bibtex-entry]



10. D. Rey, G. Subsol, H. Delingette, and N. Ayache. Automatic detection and segmentation of evolving processes in 3D medical images: application to multiple sclerosis. Research report RR-3559, INRIA, November 1998. Keyword(s): tech-report, reconstruction, segmentation, automatic detection, evolving processes, vector field analysis, multiple sclerosis. [bibtex-entry]



11. Alexis Roche, Grégoire Malandain, Xavier Pennec, and Nicholas Ayache. Multimodal Image Registration by Maximization of the Correlation Ratio. Research report RR-3378, INRIA, August 1998. Note: Published in MICCAI'98, Cambridge, USA, LNCS 1496, p. 1115-1124. Keyword(s): registration, matching, multimodal, correlation ratio. [bibtex-entry]



12. Luc Soler, G. Malandain, and H. Delingette. Segmentation automatique des réseaux vasculaires dans les images d'angiographie 3D. Research report RR-3496, INRIA, 1998. Keyword(s): tech-report, reconstruction. [bibtex-entry]



13. S. Valente, J.-L. Dugelay, and H. Delingette. Geometric and Photometric Head Modeling for Facial Analysis Technologies. Technical report RR-98-041, Institut Eurecom, 1998. Keyword(s): tech-report, reconstruction. [bibtex-entry]

1. H. Delingette. General Object Reconstruction based on Simplex Meshes. Research report RR-3111, Inria, February 1997. Keyword(s): tech-report, reconstruction. [bibtex-entry]



2. Jean-Philippe Thirion and G. Calmon. Deformation Analysis to Detect and Quantify Active Lesions in 3D Medical Images Sequences. Research report RR-3101, Inria, February 1997. [bibtex-entry]



3. J.-P. Thirion, S. Prima, and G. Subsol. Statistical Analysis of Dissymmetry in Volumetric Medical Images. Research report RR-3178, Inria, June 1997. [bibtex-entry]

1. E. Bardinet, L.D. Cohen, and N. Ayache. Analyzing the deformation of the left ventricle of the heart with a parametric deformable model. Research report RR-2797, INRIA, Sophia-Antipolis, February 1996. [bibtex-entry]



2. J. Declerck, J. Feldmar, and N. Ayache. Definition of a 4D continuous polar transformation for the tracking and the analysis of LV motion. Research report RR-3039, Inria, November 1996. Keyword(s): Matching, Heart, SPECT, Splines, Atlas. [bibtex-entry]



3. J. Declerck, J. Feldmar, M.L. Goris, and F. Betting. Automatic Registration and Alignment on a Template of Cardiac Stress & Rest SPECT Images. Research report RR-2770, INRIA, February 1996. [bibtex-entry]



4. S. Fernández-Vidal and G. Malandain. Squelettes euclidiens d'objets discrets n-dimensionnels. Research report RR-2771, INRIA, 2004 route des Lucioles BP 93, 06902 Sophia Antipolis Cedex, France, janvier 1996. Note: Published in Image and Vision Computing. [bibtex-entry]



5. K. Krissian, G. Malandain, and N. Ayache. Directional Anisotropic Diffusion applied to segmentation of vessels in 3D images. Research report RR-3064, Inria Sophia Antipolis, 2004 route des Lucioles BP 93 06902 Sophia Antipolis Cedex (France), December 1996. [bibtex-entry]



6. Xavier Pennec and Nicholas Ayache. Randomness and Geometric Features in Computer Vision. Research report RR-2820, INRIA, March 1996. Note: Published in J. of Math. Imag. and Vision 9(1), July 1998, p. 49-67. Keyword(s): geometry, statistics, uncertainty, Riemannian geometry. [bibtex-entry]



7. L. Robert and G. Malandain. Fast Binary Image Processing Using Binary Decision Diagrams. Research report RR-3001, INRIA, 2004 route des Lucioles BP 93, 06902 Sophia Antipolis Cedex, France, octobre 1996. [bibtex-entry]

1. E. Bardinet, L.D. Cohen, and N. Ayache. A parametric deformable model to fit unstructured 3D data. Research report RR-2617, INRIA, July 1995. [bibtex-entry]



2. J. Declerck, G. Subsol, J.-P. Thirion, and N. Ayache. Automatic Retrieval of Anatomical Structures in 3D Medical Images. Research report RR-2485, INRIA, February 1995. [bibtex-entry]



3. G. Malandain, S. Fernández-Vidal, and J.-M. Rocchisani. Physically Based Rigid Registration of 3-D Free-Form Objects: Application to Medical Imaging. Research report RR-2453, INRIA, January 1995. [bibtex-entry]



4. Xavier Pennec and Jean-Philippe Thirion. Validation of 3D Registration Methods based on Points and Frames. Research report RR-2470, INRIA, January 1995. Note: Published in Int. J. of Comp. Vision 25(3), 1997, p. 203-229. Keyword(s): registration, matching, uncertainty, validation. [bibtex-entry]



5. G. Subsol, J.-P. Thirion, and N. Ayache. A General Scheme for Automatically Building 3D Morphometric Anatomical Atlases: application to a Skull Atlas. Research report RR-2586, INRIA, March 1995. Keyword(s): registration, matching, atlas. [bibtex-entry]



6. J.-P. Thirion. Fast Non-Rigid Matching of 3D Medical Images. Research report RR-2547, INRIA, May 1995. Keyword(s): registration, matching, deformations. [bibtex-entry]

1. H. Delingette. Simplex Meshes: a General Representation for 3D Shape Reconstruction. Research report RR-2214, INRIA, March 1994. Keyword(s): tech-report, reconstruction. [bibtex-entry]



2. H. Delingette, G. Subsol, S. Cotin, and J. Pignon. A Craniofacial Surgery Testbed. Research report RR-2199, I.N.R.I.A., Sophia-Antipolis, France, February 1994. Keyword(s): tech-report, simulation. [bibtex-entry]



3. J. Feldmar, N. Ayache, and F. Betting. 3D-2D projective registration of free-form curves and surfaces. Research report RR-2434, INRIA, December 1994. [bibtex-entry]



4. I. L. Herlin, D. Béréziat, G. Giraudon, C. Nguyen, and C. Graffigne. Comparison of different Markov random fields model for segmenting echocardiographic images. Research report, INRIA, 1994. [bibtex-entry]



5. O. Monga, R. Lengagne, and R. Deriche. Extraction of the zero-crossing of the curvature derivative in volumic 3D medical images : a multi-scale approach. Research report, INRIA, Juin 1994. [bibtex-entry]



6. Xavier Pennec and Nicholas Ayache. An ${{\cal O}}(n^2)$ Algorithm for 3D Substructure Matching of Proteins. Research report RR-2274, INRIA, May 1994. Note: Published in Bioinformatics 14(6), 1998, p. 516-522. Keyword(s): registration, matching, protein structure. [bibtex-entry]

1. Laurent D. Cohen, Eric Bardinet, and Nicholas Ayache. Surface Reconstruction using Active Contour Models. Research report RR-1824, INRIA, February 1993. [bibtex-entry]



2. Alexis Gourdon and Nicholas Ayache. Registration of a curve on a surface using differential properties. Research report RR-2145, INRIA, December 1993. Keyword(s): registration, matching. [bibtex-entry]



3. Grégoire Malandain. On topology in multidimensional discrete spaces. Research report RR-2098, INRIA, 2004 route des Lucioles BP 93, 06902 Sophia Antipolis Cedex, France, November 1993. [bibtex-entry]



4. G. Malandain and J.-M. Rocchisani. Matching of 3-D medical images with a potential based method. Research report RR-1890, INRIA, March 1993. Keyword(s): registration, matching. [bibtex-entry]



5. Chahab Nastar. Analytical Computation of the Free Vibration Modes: Application to Non Rigid Motion Analysis and Animation in 3-D Images. Research report RR-1935, INRIA, June 1993. [bibtex-entry]



6. Xavier Pennec. Correctness and Robustness of 3D Rigid Matching with Bounded Sensor Error. Research report RR-2111, INRIA, November 1993. Keyword(s): registration, matching, uncertainty. [bibtex-entry]



7. J.-P. Thirion. New Feature Points based on Geometric Invariants for 3D Image Registration. Research report RR-1901, INRIA, April 1993. Keyword(s): registration, matching. [bibtex-entry]



8. J.-P. Thirion and S. Benayoun. Image Surface Extremal Points, new feature points for Image Registration. Research report RR-2003, INRIA, July 1993. Note: (submitted to IEEE TMI). Keyword(s): registration, matching. [bibtex-entry]



9. J.-P. Thirion and A. Gourdon. The 3D Marching Lines Algorithm : new results and proofs : part 1. Research report RR-1881-1, INRIA, April 1993. [bibtex-entry]



10. J.-P. Thirion and A. Gourdon. The 3D Marching Lines Algorithm : new results and proofs : part 2. Research report RR-1881-2, INRIA, April 1993. [bibtex-entry]

1. G. Bertrand and G. Malandain. A New Characterization of three-dimensional Simple Points. Internal report, ESIEE, 1992. [bibtex-entry]



2. E. Clergue. Modèles Déformables à Partir du Produit Tensoriel de Fonctions Splines. Rapport de stage, INRIA, October 1992. [bibtex-entry]



3. I. Cohen, N. Ayache, and P. Sulger. Tracking points on deformables objects. Research report RR-1595, INRIA, February 1992. [bibtex-entry]



4. Isaac Cohen and Laurent D. Cohen. A Hybrid Hyperquadric Model for 2-D and 3-D Data Fitting. Research report RR-2188, INRIA, 1992. [bibtex-entry]



5. Herve Delingette, Martial Hébert, and Katsuchi Ikeuchi. Representation and Recognition of Free-Form Surfaces. Technical report CMU-CS-92-214, Carnegie-Mellon Univertsity, Pittsburgh, PA, 1992. Keyword(s): tech-report, recognition. [bibtex-entry]



6. I. Gastambide. Calibrage d'images IRM,. Rapport de stage de DEA de Génie Biologique et Médical, INRIA-Université Joseph Fourier de Grenoble, Septembre 1992. [bibtex-entry]



7. A. Gorre. Etude de quelques problèmes liés aux Modèles de Contours Actifs. Technical report, INRIA, Septembre 1992. Note: Rapport de DEA. [bibtex-entry]



8. A. Guéziec. Large Deformable Splines, Crest Lines and Matching. Research report RR-1782, INRIA, October 1992. [bibtex-entry]



9. J. Lévy Véhel. Fractals and Integral Geometry Tools for Textures Deformation Measurement. Research report RR-1707, INRIA, 1992. [bibtex-entry]



10. J. Lévy Véhel. Textures Analysis using Fractal Probability Functions. Research report RR-1706, INRIA, 1992. [bibtex-entry]



11. C. Nastar and N. Ayache. Fast Segmentation, Tracking, and Analysis of Deformable Objects. Research report RR-1783, INRIA, October 1992. [bibtex-entry]



12. C. Pelou and A. State. Calibration en reconstruction tri-dimensionelle. Rapport de stage, INRIA-Ecole Centrale de Paris, Mars 1992. [bibtex-entry]



13. Xavier Pennec. Etude d'améliorations possibles de techniques neuro-mimétiques appliquées à la reconnaissance de caractères manuscrits. Rapport interne, ONERA - DMI/GIA, 1992. Note: Also in Rapport de stage d'option, Ecole Polytechnique. [bibtex-entry]



14. V. Sauclières. Architecture d'une chaîne de traitement d'images médicales. Rapport de stage, INRIA-ESIGELEC, Juin 1992. [bibtex-entry]



15. J.-Ph. Thirion. The Gradient and Laplacien Filtered Back Projection Operators. Research report RR-1787, INRIA, October 1992. Note: (submitted to IEEE TMI). [bibtex-entry]



16. J.-Ph. Thirion and A. Gourdon. The 3D Marching Lines Algorithm and Its Application to Crest Lines Extraction. Research report RR-1672, INRIA, May 1992. [bibtex-entry]

1. O. Cueto. Reconstruction d'objets 3D à partir de coupes planes en imagerie médicale. Rapport de stage, INRIA, Juin 1991. [bibtex-entry]



2. H. Magaud. Obtenir des images pour faire de la reconstruction tri-dimensionnelle en Tomographie Géométrique. Rapport de stage, INRIA, September 1991. [bibtex-entry]



3. C. Nastar. Suivi de contours en imagerie médicale. Rapport de stage de DEA, INRIA, Juin 1991. [bibtex-entry]



4. J.-Ph. Thirion. A Geometric Alternative to Computed Tomography. Research Report RR-1463, INRIA, June 1991. [bibtex-entry]

1. Grégoire Malandain, G. Bertrand, and Nicholas Ayache. Segmentation topologique des surfaces discretes. Research report RR-1357, INRIA, décembre 1990. [bibtex-entry]

1. Olivier Monga, Rachid Deriche, G. Malandain, and J.P. Cocquerez. Recursive filtering and edge closing : two primary tools for 3d edge detection. Research report RR-1103, INRIA, October 1989. [bibtex-entry]

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