-
M. A. González Ballester,
A. Zisserman,
and M. Brady.
Estimation of the Partial Volume Effect in MRI.
Medical Image Analysis,
6(4):389-405,
December 2002.
@article{Gonzalez:Media:02,
author = {Gonz\'alez Ballester, M. A. and A. Zisserman and M. Brady},
journal = {Medical Image Analysis},
month = {December},
number = {4},
pages = {389--405},
publisher = {Elsevier},
title = {Estimation of the Partial Volume Effect in MRI},
url = {https://www-sop.inria.fr/asclepios/Publications/Gonzalez/Gonzalez_MedIA_2002.pdf},
volume = {6},
year = {2002}
}
-
P. Jannin,
J.M. Fitzpatrick,
D.J. Hawkes,
X. Pennec,
R. Shahidi,
and M.W. Vannier.
Validation of Medical Image Processing in Image-guided Therapy.
IEEE Transactions on Medical Imaging,
21(12):1445-1449,
December 2002.
@article{Jannin-edito-TMI02,
author = {P. Jannin and J.M. Fitzpatrick and D.J. Hawkes and X. Pennec and R. Shahidi and M.W. Vannier},
doi = {10.1109/TMI.2002.806568},
hal-identifiant = {inserm-00331766},
journal = {IEEE Transactions on Medical Imaging},
month = {December},
number = {12},
pages = {1445--1449},
pmid = {12588028},
title = {Validation of Medical Image Processing in Image-guided Therapy},
url-hal = {http://hal.inria.fr/inserm-00331766/en/},
url-publisher = {http://ieeexplore.ieee.org/xpl/tocresult.jsp?isYear=2002&isnumber=26419},
volume = {21},
year = {2002}
}
-
Carine Karachi,
Chantal François,
Karine Parain,
Eric Bardinet,
Dominique Tandé,
Etienne Hirsch,
and Jérôme Yelnik.
Three-dimensional cartography of functional territories in the human striatopallidal complex by using calbindin immunoreactivity.
Journal of Comparative Neurology,
450(2):122-134,
August 2002.
Abstract: |
This anatomic study presents an analysis of the distribution of calbindin immunohistochemistry in the human striatopallidal complex. Entire brains were sectioned perpendicularly to the mid-commissural line into 70-microm-thick sections. Every tenth section was immunostained for calbindin. Calbindin labeling exhibited a gradient on the basis of which three different regions were defined: poorly labeled, strongly labeled, and intermediate. Corresponding contours were traced in individual sections and reformatted as three-dimensional structures. The poorly labeled region corresponded to the dorsal part of the striatum and to the central part of the pallidum. The strongly labeled region included the ventral part of the striatum, the subcommissural part of the external pallidum but also the adjacent portion of its suscommissural part, and the anterior pole of the internal pallidum. The intermediate region was located between the poorly and strongly labeled regions. As axonal tracing and immunohistochemical studies in monkeys show a similar pattern, poorly, intermediate, and strongly labeled regions were considered as the sensorimotor, associative, and limbic territories of the human striatopallidal complex, respectively. However, the boundaries between these territories were not sharp but formed gradients of labeling, which suggests overlapping between adjacent territories. Similarly, the ventral boundary of the striatopallidal complex was blurred, suggesting a structural intermingling with the substantia innominata. This three-dimensional partitioning of the human striatopallidal complex could help to define functional targets for high-frequency stimulation with greater accuracy and help to identify new stimulation sites. |
@article{Bardinet:CompNeurol:2002,
abstract = {This anatomic study presents an analysis of the distribution of calbindin immunohistochemistry in the human striatopallidal complex. Entire brains were sectioned perpendicularly to the mid-commissural line into 70-microm-thick sections. Every tenth section was immunostained for calbindin. Calbindin labeling exhibited a gradient on the basis of which three different regions were defined: poorly labeled, strongly labeled, and intermediate. Corresponding contours were traced in individual sections and reformatted as three-dimensional structures. The poorly labeled region corresponded to the dorsal part of the striatum and to the central part of the pallidum. The strongly labeled region included the ventral part of the striatum, the subcommissural part of the external pallidum but also the adjacent portion of its suscommissural part, and the anterior pole of the internal pallidum. The intermediate region was located between the poorly and strongly labeled regions. As axonal tracing and immunohistochemical studies in monkeys show a similar pattern, poorly, intermediate, and strongly labeled regions were considered as the sensorimotor, associative, and limbic territories of the human striatopallidal complex, respectively. However, the boundaries between these territories were not sharp but formed gradients of labeling, which suggests overlapping between adjacent territories. Similarly, the ventral boundary of the striatopallidal complex was blurred, suggesting a structural intermingling with the substantia innominata. This three-dimensional partitioning of the human striatopallidal complex could help to define functional targets for high-frequency stimulation with greater accuracy and help to identify new stimulation sites.},
author = {Carine Karachi and Chantal Fran\c{c}ois and Karine Parain and Eric Bardinet and Dominique Tand\'e and Etienne Hirsch and J\'er\^ome Yelnik},
journal = {Journal of Comparative Neurology},
month = {August},
pages = {122--134},
title = {Three-dimensional cartography of functional territories in the human striatopallidal complex by using calbindin immunoreactivity},
volume = {450(2)},
year = {2002}
}
-
Ferath Kherif,
Jean-Baptiste Poline,
Guillaume Flandin,
Habib Benali,
Olivier Simon,
Stanislas Dehaene,
and Keith J. Worsley.
Multivariate Model Specification for fMRI Data.
NeuroImage,
16(4):1068-1083,
August 2002.
Keyword(s): fMRI,
model selection,
multivariate analysis.
@article{Kherif:NeuroImage:02,
author = {Ferath Kherif and Jean-Baptiste Poline and Guillaume Flandin and Habib Benali and Olivier Simon and Stanislas Dehaene and Keith J. Worsley},
journal = {NeuroImage},
keywords = {fMRI, model selection, multivariate analysis},
month = {August},
number = {4},
pages = {1068--1083},
title = {Multivariate Model Specification for fMRI Data},
volume = {16},
year = {2002}
}
-
Grégoire Malandain and Jean-Daniel Boissonnat.
Computing the Diameter of a Point Set.
International Journal of Computational Geometry & Applications,
12(6):489-510,
December 2002.
Keyword(s): computational geometry,
diameter,
width,
approximation,
point sets,
furthest neighbors,
double normal.
Abstract: |
Given a finite set of points ${\cal P}$ in ${\R}^d$, the diameter of $\cal P$ is defined as the maximum distance between two points of $\cal P$. We propose a very simple algorithm to compute the diameter of a finite set of points. Although the algorithm is not worst-case optimal, an extensive experimental study has shown that it is extremely fast for a large variety of point distributions. In addition, we propose a comparison with the recent approach of Har-Peled and derive hybrid algorithms to combine advantages of both approaches. |
@article{malandain-boissonnat:ijcga:2002,
abstract = {Given a finite set of points ${\cal P}$ in ${\R}^d$, the diameter of $\cal P$ is defined as the maximum distance between two points of $\cal P$. We propose a very simple algorithm to compute the diameter of a finite set of points. Although the algorithm is not worst-case optimal, an extensive experimental study has shown that it is extremely fast for a large variety of point distributions. In addition, we propose a comparison with the recent approach of Har-Peled and derive hybrid algorithms to combine advantages of both approaches.},
author = {Gr\'egoire Malandain and Jean-Daniel Boissonnat},
journal = {International Journal of Computational Geometry & Applications},
keywords = {computational geometry, diameter, width, approximation, point sets, furthest neighbors, double normal},
month = {December},
number = {6},
pages = {489--510},
title = {Computing the Diameter of a Point Set},
url = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/malandain-ijcga-2002.pdf},
volume = {12},
year = {2002}
}
-
G. Picinbono,
H. Delingette,
and N. Ayache.
Modèle déformable élastique non-linéaire pour la simulation de chirurgie en temps réel.
Les Comptes Rendus de l'Académie des Sciences (CRAS), C.R. Biologies,
325(4):335-344,
2002.
Keyword(s): journal,
simulation.
@article{Picinbono-CRAS02,
author = {G. Picinbono and H. Delingette and N. Ayache},
journal = {Les Comptes Rendus de l'Acad\'emie des Sciences (CRAS), C.R. Biologies},
keywords = {journal, simulation},
number = {4},
pages = {335-344},
title = {Mod\`ele d\'eformable \'elastique non-lin\'eaire pour la simulation de chirurgie en temps r\'eel},
url = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/Picinbono-cras.pdf},
volume = {325},
year = {2002}
}
-
G. Picinbono,
J-C. Lombardo,
H. Delingette,
and N. Ayache.
Improving realism of a surgery simulator: linear anisotropic elasticity, complex interactions and force extrapolation.
Journal of Visualisation and Computer Animation,
13(3):147-167,
July 2002.
Keyword(s): journal,
simulation.
@article{Picinbono:VCA:01,
author = {G. Picinbono and J-C. Lombardo and H. Delingette and N. Ayache},
journal = {Journal of Visualisation and Computer Animation},
keywords = {journal, simulation},
month = {July},
number = {3},
pages = {147-167},
title = {Improving realism of a surgery simulator: linear anisotropic elasticity, complex interactions and force extrapolation},
url = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/Picinbono-vca.pdf},
volume = {13},
year = {2002}
}
-
Alain Pitiot,
Paul M. Thompson,
and Arthur W. Toga.
Adaptive Elastic Segmentation of Brain MRI via Shape Model Guided Evolutionary Programming.
IEEE Transactions on Medical Imaging,
21(8):910-923,
August 2002.
Keyword(s): MRI.
@article{Pitiot:TMI:02,
author = {Alain Pitiot and Paul M. Thompson and Arthur W. Toga},
journal = {IEEE Transactions on Medical Imaging},
keywords = {MRI},
month = {August},
number = {8},
pages = {910--923},
title = {Adaptive Elastic Segmentation of Brain MRI via Shape Model Guided Evolutionary Programming},
url = {https://www-sop.inria.fr/asclepios/Publications/Pitiot/pitiot-tmi-21-8.pdf},
volume = {21},
year = {2002}
}
-
S. Prima,
S. Ourselin,
and N. Ayache.
Computation of the Mid-Sagittal Plane in 3D Brain Images.
IEEE Transactions on Medical Imaging,
21(2):122-138,
February 2002.
Keyword(s): registration,
matching.
@article{Prima:TMI:02,
author = {S. Prima and S. Ourselin and N. Ayache},
journal = {IEEE Transactions on Medical Imaging},
keywords = {registration, matching},
month = {February},
number = {2},
pages = {122--138},
postscript = {https://www-sop.inria.fr/asclepios/Publications/Prima/tmi.final.ps.gz},
title = {Computation of the Mid-Sagittal Plane in 3D Brain Images},
url = {https://www-sop.inria.fr/asclepios/Publications/Prima/tmi.final.pdf},
volume = {21},
year = {2002}
}
-
David Rey,
Gérard Subsol,
Hervé Delingette,
and Nicholas Ayache.
Automatic Detection and Segmentation of Evolving Processes in 3D Medical Images: Application to Multiple Sclerosis.
Medical Image Analysis,
6(2):163-179,
June 2002.
Keyword(s): Automation,
Brain,
pathology,
Human,
Image Processing Computer-Assisted,
methods,
Imaging Three-Dimensional,
methods,
Magnetic Resonance Imaging,
methods,
Models Neurological,
Multiple Sclerosis,
diagnosis,
Reproducibility of Results,
Sensitivity and Specificity,
Support Non-U.S. Gov't.
Abstract: |
The study of temporal series of medical images can be helpful for physicians to perform pertinent diagnoses and to help them in the follow-up of a patient: in some diseases, lesions, tumors or anatomical structures vary over time in size, position, composition, etc., either because of a natural pathological process or under the effect of a drug or a therapy. It is a laborious and subjective task to visually and manually analyze such images. Thus the objective of this work was to automatically detect regions with apparent local volume variation with a vector field operator applied to the local displacement field obtained after a non-rigid registration between two successive temporal images. On the other hand, quantitative measurements, such as the volume variation of lesions or segmentation of evolving lesions, are important. By studying the information of apparent shrinking areas in the direct and reverse displacement fields between images, we are able to segment evolving lesions. Then we propose a method to segment lesions in a whole temporal series of images. In this article we apply this approach to automatically detect and segment multiple sclerosis lesions that evolve in time series of MRI scans of the brain. At this stage, we have only applied the approach to a few experimental cases to demonstrate its potential. A clinical validation remains to be done, which will require important additional work. |
@article{Rey:MEDIA:02,
abstract = {The study of temporal series of medical images can be helpful for physicians to perform pertinent diagnoses and to help them in the follow-up of a patient: in some diseases, lesions, tumors or anatomical structures vary over time in size, position, composition, etc., either because of a natural pathological process or under the effect of a drug or a therapy. It is a laborious and subjective task to visually and manually analyze such images. Thus the objective of this work was to automatically detect regions with apparent local volume variation with a vector field operator applied to the local displacement field obtained after a non-rigid registration between two successive temporal images. On the other hand, quantitative measurements, such as the volume variation of lesions or segmentation of evolving lesions, are important. By studying the information of apparent shrinking areas in the direct and reverse displacement fields between images, we are able to segment evolving lesions. Then we propose a method to segment lesions in a whole temporal series of images. In this article we apply this approach to automatically detect and segment multiple sclerosis lesions that evolve in time series of MRI scans of the brain. At this stage, we have only applied the approach to a few experimental cases to demonstrate its potential. A clinical validation remains to be done, which will require important additional work.},
author = {David Rey and G\'erard Subsol and Herv\'e Delingette and Nicholas Ayache},
journal = {Medical Image Analysis},
keywords = {Automation, Brain, pathology, Human, Image Processing Computer-Assisted, methods, Imaging Three-Dimensional, methods, Magnetic Resonance Imaging, methods, Models Neurological, Multiple Sclerosis, diagnosis, Reproducibility of Results, Sensitivity and Specificity, Support Non-U.S. Gov't},
month = {June},
number = {2},
pages = {163-179},
title = {Automatic Detection and Segmentation of Evolving Processes in 3D Medical Images: Application to Multiple Sclerosis},
url = {https://www-sop.inria.fr/asclepios/Publications/Rey/rey-media-2002.pdf},
volume = {6},
year = {2002}
}
-
N. Ayache.
Medical Imaging Informatics. From Digital Anatomy to Virtual Scapels and Image Guided Therapy.
In R Haux and C Kulikowski, editors, Medical Imaging Informatics (IMIA Yearbook of Medical Informatics).
Schattauer Verlagsgesellschaft mbH, Stuttgart,
2002.
ISBN: 3-7945-2193-5.
@incollection{Ayache:IMIA:02,
author = {N. Ayache},
booktitle = {Medical Imaging Informatics (IMIA Yearbook of Medical Informatics)},
editor = {R Haux and C Kulikowski},
isbn = {3-7945-2193-5},
publisher = {Schattauer Verlagsgesellschaft mbH, Stuttgart},
title = {Medical Imaging Informatics. From Digital Anatomy to Virtual Scapels and Image Guided Therapy},
url = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/ayache-preface-yearbook02.pdf},
year = {2002}
}
-
G. Subsol,
B. Mafart,
A. Silvestre,
and M.A. de Lumley.
3D Image Processing for the Study of the Evolution of the Shape of the Human Skull: Presentation of the Tools and Preliminary Results.
In B. Mafart,
H. Delingette,
and G. Subsol, editors, Three-Dimensional Imaging in Paleoanthropology and Prehistoric Archaeology,
pages 37-45.
BAR International Series 1049,
2002.
@incollection{Subsol-BAR-2002,
author = {G. Subsol and B. Mafart and A. Silvestre and de Lumley, M.A.},
booktitle = {Three-Dimensional Imaging in Paleoanthropology and Prehistoric Archaeology},
editor = {B. Mafart and H. Delingette and G. Subsol},
pages = {37--45},
publisher = {BAR International Series 1049},
title = {3D Image Processing for the Study of the Evolution of the Shape of the Human Skull: Presentation of the Tools and Preliminary Results},
url = {http://www.lirmm.fr/~subsol/BAR.0901.a.pdf},
year = {2002}
}
-
J Annese,
A. Pitiot,
and A. Toga.
3D cortical thickness maps from histological volumes.
In Human Brain Mapping HBM'02,
2002.
Keyword(s): histology.
@inproceedings{Pitiot:BrainMapping-a:02,
author = {J Annese and A. Pitiot and A. Toga},
booktitle = {Human Brain Mapping HBM'02},
keywords = {histology},
title = {3D cortical thickness maps from histological volumes},
year = {2002}
}
-
Eric Bardinet,
Pascal Cathier,
Alexis Roche,
Nicholas Ayache,
and Didier Dormont.
A posteriori validation of pre-operative planning in functional neurosurgery by quantification of brain pneumocephalus.
In Takeyoshi Dohi and Ron Kikinis, editors,
Medical Image Computing and Computer-Assisted Intervention (MICCAI'02),
volume 2488 of LNCS,
Tokyo,
pages 323-330,
September 2002.
Springer.
Keyword(s): functional neurosurgery.
@inproceedings{Bardinet:Pneumo:MICCAI:02,
address = {Tokyo},
author = {Eric Bardinet and Pascal Cathier and Alexis Roche and Nicholas Ayache and Didier Dormont},
booktitle = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'02)},
editor = {Takeyoshi Dohi and Ron Kikinis},
keywords = {functional neurosurgery},
month = {September},
pages = {323--330},
publisher = {Springer},
series = {LNCS},
title = {A posteriori validation of pre-operative planning in functional neurosurgery by quantification of brain pneumocephalus},
url = {https://www-sop.inria.fr/asclepios/Publications/Bardinet/bardinet-pneumo-miccai-2002.pdf},
volume = {2488},
year = {2002}
}
-
Eric Bardinet,
Sébastien Ourselin,
Didier Dormont,
Grégoire Malandain,
Dominique Tandé,
Karine Parain,
Nicholas Ayache,
and Jérôme Yelnik.
Co-registration of histological, optical and MR data of the human brain.
In Takeyoshi Dohi and Ron Kikinis, editors,
Medical Image Computing and Computer-Assisted Intervention (MICCAI'02),
volume 2488 of LNCS,
Tokyo,
pages 548-555,
September 2002.
Springer.
Keyword(s): registration,
human brain atlas,
histology,
MRI.
@inproceedings{Bardinet:SIERA:MICCAI:02,
address = {Tokyo},
author = {Eric Bardinet and S\'ebastien Ourselin and Didier Dormont and Gr\'egoire Malandain and Dominique Tand\'e and Karine Parain and Nicholas Ayache and J\'er\^ome Yelnik},
booktitle = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'02)},
editor = {Takeyoshi Dohi and Ron Kikinis},
keywords = {registration, human brain atlas, histology, MRI},
month = {September},
pages = {548--555},
publisher = {Springer},
series = {LNCS},
title = {Co-registration of histological, optical and MR data of the human brain},
url = {https://www-sop.inria.fr/asclepios/Publications/Bardinet/bardinet-siera-miccai-2002.pdf},
volume = {2488},
year = {2002}
}
-
Eric Bardinet,
Sébastien Ourselin,
Grégoire Malandain,
Dominique Tandé,
Karine Parain,
Nicholas Ayache,
and Jérôme Yelnik.
Three dimensional functional cartography of the human basal ganglia by registration of optical and histological serial sections.
In IEEE International Symposium on Biomedical Imaging,
Washington, USA,
pages 329-332,
2002.
Keyword(s): registration,
human brain atlas,
histology,
MRI.
@inproceedings{Bardinet:ISBI:02,
address = {Washington, USA},
author = {Eric Bardinet and S\'ebastien Ourselin and Gr\'egoire Malandain and Dominique Tand\'e and Karine Parain and Nicholas Ayache and J\'er\^ome Yelnik},
booktitle = {IEEE International Symposium on Biomedical Imaging},
keywords = {registration, human brain atlas, histology, MRI},
pages = {329--332},
title = {Three dimensional functional cartography of the human basal ganglia by registration of optical and histological serial sections},
url = {https://www-sop.inria.fr/asclepios/Publications/Bardinet/bardinet-isbi-2002.pdf},
year = {2002}
}
-
Christophe Blondel,
Régis Vaillant,
Frédéric Devernay,
Grégoire Malandain,
and Nicholas Ayache.
Automatic trinocular 3D reconstruction of coronary artery centerlines from rotational X-ray angiography.
In Computer Assisted Radiology and Surgery 2002 Proceedings,
Paris,
pages 1073-1078,
June 2002.
Springer.
Note: International Symposium on Cardiovascular Imaging - Invasive Coronary and Vascular Imaging.
@inproceedings{blondel:cars:2002,
address = {Paris},
author = {Christophe Blondel and R\'egis Vaillant and Fr\'ed\'eric Devernay and Gr\'egoire Malandain and Nicholas Ayache},
booktitle = {Computer Assisted Radiology and Surgery 2002 Proceedings},
hal-identifiant = {inria-00262383},
month = {June},
note = {International Symposium on Cardiovascular Imaging - Invasive Coronary and Vascular Imaging},
pages = {1073-1078},
publisher = {Springer},
title = {Automatic trinocular 3D reconstruction of coronary artery centerlines from rotational X-ray angiography},
url = {https://www-sop.inria.fr/chir/personnel/Christophe.Blondel/CARS_2002_Christophe_Blondel.pdf},
url-hal = {http://hal.inria.fr/inria-00262383/en/},
year = {2002}
}
-
Jean-Daniel Boissonnat,
Raphaelle Chaine,
P. Frey,
G. Malandain,
F. Nicoud,
S. Salmon,
E. Saltel,
and M. Thiriet.
From medical images to computational meshes.
In Marc Thiriet, editor,
Conference on Modelling and Simulation for Computer-aided Medicine and Surgery (MS4CMS'02),
volume 12 of ESAIM: PROC,
pages 1-7,
2002.
European Series in Applied and Industrial Mathematics.
@inproceedings{boissonnat:ms4cms:2002,
author = {Jean-Daniel Boissonnat and Raphaelle Chaine and P. Frey and G. Malandain and F. Nicoud and S. Salmon and E. Saltel and M. Thiriet},
booktitle = {Conference on Modelling and Simulation for Computer-aided Medicine and Surgery (MS4CMS'02)},
editor = {Marc Thiriet},
pages = {1--7},
publisher = {European Series in Applied and Industrial Mathematics},
series = {ESAIM: PROC},
title = {From medical images to computational meshes},
url-publisher = {http://www.edpsciences.org/articlesproc/Vol.12/PDF/Boissonnat.pdf},
volume = {12},
year = {2002}
}
-
Didier Dormont,
Eric Bardinet,
Alexis Roche,
Pascal Cachier,
François Bonneville,
Nicholas Ayache,
Philippe Cornu,
and Claude Marsault.
Study of per-operative pneumocephalus during functional stereotactic procedures using automated registration algorithms of pre and immediate post operative 3D MR acquisitions.
In XVIIth Symposium Neuroradiologicum,
Paris,
August 2002.
@inproceedings{Bardinet:SympNeuroradio:2002,
address = {Paris},
author = {Didier Dormont and Eric Bardinet and Alexis Roche and Pascal Cachier and Fran\c{c}ois Bonneville and Nicholas Ayache and Philippe Cornu and Claude Marsault},
booktitle = {XVIIth Symposium Neuroradiologicum},
month = {August},
title = {Study of per-operative pneumocephalus during functional stereotactic procedures using automated registration algorithms of pre and immediate post operative 3D MR acquisitions},
year = {2002}
}
-
Guillaume Flandin,
Ferath Kherif,
Xavier Pennec,
Grégoire Malandain,
Nicholas Ayache,
and Jean-Baptiste Poline.
Improved Detection Sensitivity in Functional MRI Data using a Brain Parcelling Technique.
In Takeyoshi Dohi and Ron Kikinis, editors,
Medical Image Computing and Computer-Assisted Intervention (MICCAI'02),
volume 2488 of LNCS,
Tokyo,
pages 467-474,
September 2002.
Springer.
Keyword(s): fMRI.
@inproceedings{Flandin:MICCAI:02,
address = {Tokyo},
author = {Guillaume Flandin and Ferath Kherif and Xavier Pennec and Gr\'egoire Malandain and Nicholas Ayache and Jean-Baptiste Poline},
booktitle = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'02)},
editor = {Takeyoshi Dohi and Ron Kikinis},
keywords = {fMRI},
month = {September},
pages = {467--474},
publisher = {Springer},
series = {LNCS},
title = {Improved Detection Sensitivity in Functional MRI Data using a Brain Parcelling Technique},
url = {https://www-sop.inria.fr/asclepios/Publications/Flandin/flandin-miccai-2002.pdf},
volume = {2488},
year = {2002}
}
-
Guillaume Flandin,
Ferath Kherif,
Xavier Pennec,
Denis Rivière,
Nicholas Ayache,
and Jean-Baptiste Poline.
A new representation of fMRI data using anatomo-functional constraints.
In NeuroImage (HBM'02),
Sendai, Japan,
2002.
Keyword(s): fMRI.
@inproceedings{Flandin:HBM:02,
address = {Sendai, Japan},
author = {Guillaume Flandin and Ferath Kherif and Xavier Pennec and Denis Rivi\`ere and Nicholas Ayache and Jean-Baptiste Poline},
booktitle = {NeuroImage (HBM'02)},
keywords = {fMRI},
title = {A new representation of fMRI data using anatomo-functional constraints},
url-publisher = {http://www.academicpress.com/journals/hbm2002/14115.html},
year = {2002}
}
-
Guillaume Flandin,
Ferath Kherif,
Xavier Pennec,
Denis Rivière,
Nicholas Ayache,
and Jean-Baptiste Poline.
Parcellation of brain images with anatomical and functional constraints for fMRI data analysis.
In IEEE International Symposium on Biomedical Imaging,
Washington, USA,
pages 907-910,
2002.
Keyword(s): fMRI.
@inproceedings{Flandin:ISBI:02,
address = {Washington, USA},
author = {Guillaume Flandin and Ferath Kherif and Xavier Pennec and Denis Rivi\`ere and Nicholas Ayache and Jean-Baptiste Poline},
booktitle = {IEEE International Symposium on Biomedical Imaging},
doi = {10.1109/ISBI.2002.1029408},
keywords = {fMRI},
pages = {907--910},
title = {Parcellation of brain images with anatomical and functional constraints for fMRI data analysis},
url = {https://www-sop.inria.fr/asclepios/Publications/Flandin/flandin-isbi-2002.pdf},
year = {2002}
}
-
Clément Forest,
Hervé Delingette,
and Nicholas Ayache.
Cutting Simulation of Manifold Volumetric Meshes.
In Takeyoshi Dohi and Ron Kikinis, editors,
Medical Image Computing and Computer-Assisted Intervention (MICCAI'02),
volume 2488 of LNCS,
Tokyo,
pages 235-244,
September 2002.
Springer.
@inproceedings{Forest:MICCAI:02,
address = {Tokyo},
author = {Cl\'ement Forest and Herv\'e Delingette and Nicholas Ayache},
booktitle = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'02)},
editor = {Takeyoshi Dohi and Ron Kikinis},
month = {September},
pages = {235--244},
publisher = {Springer},
series = {LNCS},
title = {Cutting Simulation of Manifold Volumetric Meshes},
url = {https://www-sop.inria.fr/asclepios/Publications/Forest/MICCAI2002Forest.pdf},
volume = {2488},
year = {2002}
}
-
Clément Forest,
Hervé Delingette,
and Nicholas Ayache.
Cutting Simulation of Manifold Volumetric Meshes.
In Modelling & Simulation for Computer-aided Medicine and Surgery (MS4CMS'02),
2002.
@inproceedings{Forest:MS4CMS:02,
author = {Cl\'ement Forest and Herv\'e Delingette and Nicholas Ayache},
booktitle = {Modelling & Simulation for Computer-aided Medicine and Surgery (MS4CMS'02)},
title = {Cutting Simulation of Manifold Volumetric Meshes},
url = {https://www-sop.inria.fr/asclepios/Publications/Forest/MS4CMSForest.pdf},
year = {2002}
}
-
Clément Forest,
Hervé Delingette,
and Nicholas Ayache.
Removing Tetrahedra from a Manifold Mesh.
In Computer Animation (CA'02),
Geneva, Switzerland,
pages 225-229,
June 2002.
IEEE Computer Society.
@inproceedings{Forest:CA:02,
address = {Geneva, Switzerland},
author = {Cl\'ement Forest and Herv\'e Delingette and Nicholas Ayache},
booktitle = {Computer Animation (CA'02)},
month = {June},
pages = {225--229},
publisher = {IEEE Computer Society},
title = {Removing Tetrahedra from a Manifold Mesh},
url = {https://www-sop.inria.fr/asclepios/Publications/Forest/CA2002Forest.pdf},
year = {2002}
}
-
Sébastien Granger and Xavier Pennec.
Multi-scale EM-ICP: A Fast and Robust Approach for Surface Registration.
In A. Heyden,
G. Sparr,
M. Nielsen,
and P. Johansen, editors,
European Conference on Computer Vision (ECCV 2002),
volume 2353 of LNCS,
Copenhagen, Denmark,
pages 418-432,
2002.
Springer.
Keyword(s): surface registration.
@inproceedings{granger:eccv:2002,
address = {Copenhagen, Denmark},
author = {S\'ebastien Granger and Xavier Pennec},
booktitle = {European Conference on Computer Vision (ECCV 2002)},
editor = {A. Heyden and G. Sparr and M. Nielsen and P. Johansen},
keywords = {surface registration},
pages = {418--432},
publisher = {Springer},
series = {LNCS},
title = {Multi-scale {EM-ICP}: A Fast and Robust Approach for Surface Registration},
url = {https://www-sop.inria.fr/asclepios/Publications/Granger/eccv-2002.pdf},
volume = {2353},
year = {2002}
}
-
P. Jannin,
J.M. Fitzpatrick,
D.J. Hawkes,
X. Pennec,
R. Sahidi,
and M.W. Vannier.
White paper: validation of medical image processing in image-guided therapy.
In H.U. Lemke,
M.W. Vannier,
K. Inamura,
A.G. Farman,
K. Doi,
and J.H.C. Reiber, editors,
Proc. of Int. Conf. on Computer Assisted Radiology (CARS 2002),
pages 299-305,
2002.
Springer.
@inproceedings{Jannin:validation:CARS02,
author = {P. Jannin and J.M. Fitzpatrick and D.J. Hawkes and X. Pennec and R. Sahidi and M.W. Vannier},
booktitle = {Proc. of Int. Conf. on Computer Assisted Radiology (CARS 2002)},
editor = {H.U. Lemke and M.W. Vannier and K. Inamura and A.G. Farman and K. Doi and J.H.C. Reiber},
pages = {299--305},
publisher = {Springer},
title = {White paper: validation of medical image processing in image-guided therapy},
year = {2002}
}
-
Ferath Kherif,
Guillaume Flandin,
Philippe Ciuciu,
Habib Benali,
Olivier Simon,
and Jean-Baptiste Poline.
Model Based Spatial and Temporal Similarity Measures between Series of Functional Magnetic Resonance Images.
In Takeyoshi Dohi and Ron Kikinis, editors,
Medical Image Computing and Computer-Assisted Intervention (MICCAI'02),
volume 2489 of LNCS,
Tokyo,
pages 509-516,
September 2002.
Springer.
Keyword(s): fMRI.
@inproceedings{Kherif:MICCAI:02,
address = {Tokyo},
author = {Ferath Kherif and Guillaume Flandin and Philippe Ciuciu and Habib Benali and Olivier Simon and Jean-Baptiste Poline},
booktitle = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'02)},
editor = {Takeyoshi Dohi and Ron Kikinis},
keywords = {fMRI},
month = {September},
pages = {509--516},
publisher = {Springer},
series = {LNCS},
title = {Model Based Spatial and Temporal Similarity Measures between Series of Functional Magnetic Resonance Images},
volume = {2489},
year = {2002}
}
-
Ferath Kherif,
Guillaume Flandin,
Olivier Simon,
Habib Benali,
and Jean-Baptiste Poline.
How much subjects are resembling each other? Spatial and temporal similarity measures for fMRI data.
In NeuroImage (HBM'02),
Sendai, Japan,
2002.
Keyword(s): fMRI.
@inproceedings{Kherif:HBM:02,
address = {Sendai, Japan},
author = {Ferath Kherif and Guillaume Flandin and Olivier Simon and Habib Benali and Jean-Baptiste Poline},
booktitle = {NeuroImage (HBM'02)},
keywords = {fMRI},
title = {How much subjects are resembling each other? Spatial and temporal similarity measures for fMRI data},
url-publisher = {http://www.academicpress.com/journals/hbm2002/14005.html},
year = {2002}
}
-
M.G. Linguraru and J.M. Brady.
A Non-Parametric Approach to Detecting Microcalcifications.
In H.O. Peitgen, editor,
Digital Mammography IWDM'02,
pages 339-341,
2002.
Springer.
@inproceedings{Linguraru:IWDM:02:3,
author = {M.G. Linguraru and J.M. Brady},
booktitle = {Digital Mammography IWDM'02},
editor = {H.O. Peitgen},
pages = {339--341},
publisher = {Springer},
title = {A Non-Parametric Approach to Detecting Microcalcifications},
year = {2002}
}
-
M.G. Linguraru,
J.M. Brady,
and M. Yam.
Detection of Microcalcifications using SMF.
In H.O. Peitgen, editor,
Digital Mammography IWDM'02,
pages 342-346,
2002.
Springer.
@inproceedings{Linguraru:IWDM:02:1,
author = {M.G. Linguraru and J.M. Brady and M. Yam},
booktitle = {Digital Mammography IWDM'02},
editor = {H.O. Peitgen},
pages = {342--346},
publisher = {Springer},
title = {Detection of Microcalcifications using SMF},
url = {https://www-sop.inria.fr/asclepios/Publications/Linguraru/Linguraru_IWDM_2002_1.pdf},
year = {2002}
}
-
M.G. Linguraru,
K. Marias,
and J.M. Brady.
Temporal Mass Detection.
In H.O. Peitgen, editor,
Digital Mammography IWDM'02,
pages 347-349,
2002.
Springer.
@inproceedings{Linguraru:IWDM:02:2,
author = {M.G. Linguraru and K. Marias and J.M. Brady},
booktitle = {Digital Mammography IWDM'02},
editor = {H.O. Peitgen},
pages = {347--349},
publisher = {Springer},
title = {Temporal Mass Detection},
url = {https://www-sop.inria.fr/asclepios/Publications/Linguraru/Linguraru_IWDM_2002_2.pdf},
year = {2002}
}
-
A. Mackenzie-Graham,
E. Lee,
I. Dinov,
A. Pitiot,
G. Hu,
M. Bota,
Y. Ding,
L. Capetillo-Cunlife,
K. Crawford,
B. Truong,
and A. Toga.
Atlas of the C57BL/6 mouse brain: A multimodal, multidimensional approach.
In Human Brain Mapping HBM'02,
2002.
@inproceedings{Pitiot:BrainMapping-c:02,
author = {A. Mackenzie-Graham and E. Lee and I. Dinov and A. Pitiot and G. Hu and M. Bota and Y. Ding and L. Capetillo-Cunlife and K. Crawford and B. Truong and A. Toga},
booktitle = {Human Brain Mapping HBM'02},
title = {Atlas of the C57BL/6 mouse brain: A multimodal, multidimensional approach},
year = {2002}
}
-
Grégoire Malandain and Jean-Daniel Boissonnat.
Computing the Diameter of a Point Set.
In A. Braquelaire,
J.-O. Lachaud,
and A. Vialard, editors,
Discrete Geometry for Computer Imagery (DGCI 2002),
volume 2301 of LNCS,
Bordeaux, France,
2002.
Springer.
Note: Also INRIA research report RR-4233.
Keyword(s): computational geometry,
diameter,
width,
approximation,
point sets,
furthest neighbors,
double normal.
@inproceedings{malandain-boissonnat:dgci:2002,
address = {Bordeaux, France},
author = {Gr\'egoire Malandain and Jean-Daniel Boissonnat},
booktitle = {Discrete Geometry for Computer Imagery (DGCI 2002)},
editor = {A. Braquelaire and J.-O. Lachaud and A. Vialard},
hal-identifiant = {inria-00072354},
keywords = {computational geometry, diameter, width, approximation, point sets, furthest neighbors, double normal},
note = {also INRIA research report RR-4233},
postscript = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/dgci-2002.ps.gz},
publisher = {Springer},
series = {LNCS},
title = {Computing the Diameter of a Point Set},
url = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/dgci-2002.pdf},
url-hal = {http://hal.inria.fr/inria-00072354/en/},
volume = {2301},
year = {2002}
}
-
V. Moreau,
L.D. Cohen,
and D. Pellerin.
Estimation and Analysis of the Deformation of the Cardiac Wall using Doppler Tissue Imaging.
In International Conference on Pattern Recognition,
2002.
@inproceedings{Moreau:ICPR:02,
author = {V. Moreau and L.D. Cohen and D. Pellerin},
booktitle = {International Conference on Pattern Recognition},
title = {Estimation and Analysis of the Deformation of the Cardiac Wall using Doppler Tissue Imaging},
url = {https://www-sop.inria.fr/asclepios/Publications/Moreau/icpr02.pdf},
year = {2002}
}
-
Sébastien Ourselin,
Radu Stefanescu,
and Xavier Pennec.
Robust registration of multi-modal images: towards real-time clinical applications.
In Takeyoshi Dohi and Ron Kikinis, editors,
Medical Image Computing and Computer-Assisted Intervention (MICCAI'02),
volume 2489 of LNCS,
Tokyo,
pages 140-147,
September 2002.
Springer.
Note: A preliminary version appeared as INRIA RR-4333.
Keyword(s): parallelism,
robust estimation,
registration,
matching.
@inproceedings{Ourselin:MICCAI:02,
address = {Tokyo},
author = {S\'ebastien Ourselin and Radu Stefanescu and Xavier Pennec},
booktitle = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'02)},
editor = {Takeyoshi Dohi and Ron Kikinis},
hal-identifiant = {inria-00072254},
keywords = {parallelism, robust estimation, registration, matching},
month = {September},
note = {A preliminary version appeared as INRIA RR-4333},
pages = {140--147},
publisher = {Springer},
series = {LNCS},
title = {Robust registration of multi-modal images: towards real-time clinical applications},
url = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Ourselin_Stefanescu_Pennec_MICCAI02.pdf},
url-hal = {http://hal.inria.fr/inria-00072254/en/},
volume = {2489},
year = {2002}
}
-
A. Pitiot,
A. Toga,
N. Ayache,
and P. M. Thompson.
Texture based MRI segmentation with a two-stage hybrid neural classifier.
In World Congress on Computational Intelligence / INNS-IEEE International Joint Conference on Neural Networks WCCI-IJCNN'02,
2002.
@inproceedings{Pitiot:IJCNN:02,
author = {A. Pitiot and A. Toga and N. Ayache and P. M. Thompson},
booktitle = {World Congress on Computational Intelligence / INNS-IEEE International Joint Conference on Neural Networks WCCI-IJCNN'02},
title = {Texture based MRI segmentation with a two-stage hybrid neural classifier},
url = {https://www-sop.inria.fr/asclepios/Publications/Pitiot/pitiot-wcci-2002.pdf},
year = {2002}
}
-
S. Prima,
N. Ayache,
A. Janke,
S. Francis,
D. Arnold,
and L. Collins.
Statistical Analysis of Longitudinal MRI Data: Application for detection of Disease Activity in MS.
In Takeyoshi Dohi and Ron Kikinis, editors,
Medical Image Computing and Computer-Assisted Intervention (MICCAI'02),
volume 2488 of LNCS,
Tokyo,
pages 363-371,
September 2002.
Springer.
@inproceedings{Prima:Miccai:02,
address = {Tokyo},
author = {S. Prima and N. Ayache and A. Janke and S. Francis and D. Arnold and L. Collins},
booktitle = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'02)},
editor = {Takeyoshi Dohi and Ron Kikinis},
month = {September},
pages = {363--371},
publisher = {Springer},
series = {LNCS},
title = {Statistical Analysis of Longitudinal MRI Data: Application for detection of Disease Activity in MS},
url = {https://www-sop.inria.fr/asclepios/Publications/Prima/Prima02b.pdf},
volume = {2488},
year = {2002}
}
-
M. Sermesant,
Y. Coudière,
H. Delingette,
and N. Ayache.
Progress towards an Electro-Mechanical Model of the Heart for Cardiac Image Analysis.
In IEEE International Symposium on Biomedical Imaging (ISBI'02),
pages 10-14,
2002.
Keyword(s): 4D,
Heart,
segmentation,
medical images,
motion tracking,
electromechanical model.
@inproceedings{Sermesant:ISBI:02,
author = {M. Sermesant and Y. Coudi\`ere and H. Delingette and N. Ayache},
booktitle = {IEEE International Symposium on Biomedical Imaging (ISBI'02)},
keywords = {4D, Heart, segmentation, medical images, motion tracking, electromechanical model},
pages = {10--14},
title = {Progress towards an Electro-Mechanical Model of the Heart for Cardiac Image Analysis},
url = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/ISBI2002Sermesant.pdf},
year = {2002}
}
-
M. Sermesant,
Y. Coudière,
H. Delingette,
N. Ayache,
J. Sainte-Marie,
D. Chapelle,
F. Clément,
and M. Sorine.
Progress Towards Model-Based Estimation of the Cardiac Electromechanical Activity from ECG Signals and 4D Images.
In Marc Thiriet, editor,
Modelling and Simulation for Computer-aided Medicine and Surgery (MS4CMS'02),
volume 12 of ESAIM: PROC,
pages 153-162,
2002.
European Series in Applied and Industrial Mathematics.
Keyword(s): 4D,
Heart,
segmentation,
medical images,
motion tracking,
electromechanical model.
@inproceedings{Sermesant:MS4CMS:02,
author = {M. Sermesant and Y. Coudi\`ere and H. Delingette and N. Ayache and J. Sainte-Marie and D. Chapelle and F. Cl\'ement and M. Sorine},
booktitle = {Modelling and Simulation for Computer-aided Medicine and Surgery (MS4CMS'02)},
editor = {Marc Thiriet},
keywords = {4D, Heart, segmentation, medical images, motion tracking, electromechanical model},
pages = {153--162},
postscript = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/MS4CMS2002icema.ps.gz},
publisher = {European Series in Applied and Industrial Mathematics},
series = {ESAIM: PROC},
title = {Progress Towards Model-Based Estimation of the Cardiac Electromechanical Activity from ECG Signals and 4D Images},
url-publisher = {http://www.edpsciences.org/articlesproc/Vol.12/PDF/Sermesant.pdf},
volume = {12},
year = {2002}
}
-
Maxime Sermesant,
Clément Forest,
Xavier Pennec,
Hervé Delingette,
and Nicholas Ayache.
Biomechanical Model Construction from Different Modalities: Application to Cardiac Images.
In Takeyoshi Dohi and Ron Kikinis, editors,
Medical Image Computing and Computer-Assisted Intervention (MICCAI'02),
volume 2488 of LNCS,
Tokyo,
pages 714-721,
September 2002.
Springer.
Keyword(s): 4D,
Heart,
segmentation,
medical images,
motion tracking.
@inproceedings{Sermesant:MICCAI:02,
address = {Tokyo},
author = {Maxime Sermesant and Cl\'ement Forest and Xavier Pennec and Herv\'e Delingette and Nicholas Ayache},
booktitle = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'02)},
editor = {Takeyoshi Dohi and Ron Kikinis},
keywords = {4D, Heart, segmentation, medical images, motion tracking},
month = {September},
pages = {714--721},
publisher = {Springer},
series = {LNCS},
title = {Biomechanical Model Construction from Different Modalities: Application to Cardiac Images},
url = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/MICCAI2002Sermesant.pdf},
volume = {2488},
year = {2002}
}
-
Jérôme Yelnik,
Eric Bardinet,
Didier Dormont,
Chantal François,
Dominique Tandé,
Karine Parain,
Sébastien Ourselin,
Grégoire Malandain,
Nicholas Ayache,
and Etienne Hirsch.
Elaboration of a three-dimensional, functional and registrable atlas of the human basal ganglia.
In 3rd Forum of European Neuroscience,
Paris,
July 2002.
The Federation of European Neuroscience Societies (FENS).
Keyword(s): registration,
human brain atlas,
histology,
MRI.
@inproceedings{Bardinet:FENS:2002,
address = {Paris},
author = {J\'er\^ome Yelnik and Eric Bardinet and Didier Dormont and Chantal Fran\c{c}ois and Dominique Tand\'e and Karine Parain and S\'ebastien Ourselin and Gr\'egoire Malandain and Nicholas Ayache and Etienne Hirsch},
booktitle = {3rd Forum of European Neuroscience},
keywords = {registration, human brain atlas, histology, MRI},
month = {July},
organization = {The Federation of European Neuroscience Societies (FENS)},
title = {Elaboration of a three-dimensional, functional and registrable atlas of the human basal ganglia},
year = {2002}
}
-
S. Ying,
J. Alger,
A. Pitiot,
M. Lee,
J. Jen,
R. Baloh,
D. Perlman,
D. Geschwind,
M. Jacoboni,
J. Mazziotta,
and A. Toga.
Cerebellar control of oculomotion in patients with neuronal calcium channel mutations: high resolution MRI, genotype-phenotype correlation, and functional anatomical correlation.
In Human Brain Mapping HBM'02,
2002.
@inproceedings{Pitiot:BrainMapping-b:02,
author = {S. Ying and J. Alger and A. Pitiot and M. Lee and J. Jen and R. Baloh and D. Perlman and D. Geschwind and M. Jacoboni and J. Mazziotta and A. Toga},
booktitle = {Human Brain Mapping HBM'02},
title = {Cerebellar control of oculomotion in patients with neuronal calcium channel mutations: high resolution MRI, genotype-phenotype correlation, and functional anatomical correlation},
year = {2002}
}
-
S. Ying,
J. Alger,
A. Pitiot,
D. Rex,
J. Jen,
R. Baloh,
M. Jacoboni,
J. Mazziotta,
and A. Toga.
Stochastic tomography, regional volumetric comparisons, and genotype-anatomical correlation in patients with spinocerebella ataxia type 6 and episodic ataxia type 2.
In American Academy of Neurology,
2002.
@inproceedings{Pitiot:Neurology:02,
author = {S. Ying and J. Alger and A. Pitiot and D. Rex and J. Jen and R. Baloh and M. Jacoboni and J. Mazziotta and A. Toga},
booktitle = {American Academy of Neurology},
title = {Stochastic tomography, regional volumetric comparisons, and genotype-anatomical correlation in patients with spinocerebella ataxia type 6 and episodic ataxia type 2},
year = {2002}
}