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Contents
Contents
Contents
Introduction
System Requirements
Purpose and Organization of MedINRIA
Image Viewer Module
File Formats
DICOM import
Image browsing
2D-3D view interactions
2D Views
3D View
Image reorientation tool
DTI Track Module
File Formats
Data Importation
Image visualization
2D Views
3D View
DTI Analysis and Fiber Tracking
Tensor Estimation and Smoothing
Scalar Maps
Fiber Tracking
Fiber Extraction
The Cropping Box
Regions Of Interest (ROI)
Fiber Manager
Statistics
Other Features
fMRI: Activation Map Visualization
DTI fMRI
Tensor Viewer Module
Tensor visualization
Tensor/Image visualization
Navigation
Tensor flipping
Registration Tool Module
Image import
Navigation
Rigid Registration Process
Affine Registration Process
Diffeomorphic Demons Registration
Result evaluation
Outputs and matrices
Perspectives
Lesion Segmentation Editor Module
Introduction
Applications
Segmentation modes
This tutorial
Preliminary steps
Files Requirements
File formats
Data registration and resampling
Import a DICOM folder
Open image
Rotate/Flip current image
Load ROI
Data visualization
Image Tabs
2D views
3D view
Delineation Tab
Images display
How to segment in LSE ?
Manual Segmentation
Semi-automatic segmentation
Segmentation principle
What are LSE results ?
Lesions in 3D
Label File
Statistics
Conclusions on LSE
Lesion Segmentation Comparator Module
Introduction
Applications
Segmentation comparison criteria
This tutorial
Segmentations Loading
Files Requirements
Segmentation definition
File formats
Load images
What are LSC results ?
To get statistics
Conclusions on LSC
Conclusions on MedINRIA
Diffusion gradients and registration matrix files
Diffusion gradients files
Registration matrix files
About this document ...
Nicolas Toussaint 2007-06-22
