Table of contents
General
Classes
Functions, Macros
- (*ALLOCATION_FUNCTION) function prototype to allocate memory
- (*DEALLOCATION_FUNCTION) function prototype to free memory
- _closeImage close an image file descriptor that was opened using _openImage
- _createImage creates an image descriptor from the given header information
- _freeImage Free an image descriptor
- _getNextSlice Read one slice of given image whose header has already been read
- _initImage Allocates and initializes an image descriptor
- _openReadImage open an image file from stdin (if name == NULL), from a pipe
(piped with gzip if image was compressed) or from a standard file
- _openWriteImage given an initialized file descriptor and a file name, open file
from stdout (if name == NULL), a gziped pipe (if file is gziped)
or a standard file otherwise
- _readImage Reads an image from a file and returns an image descriptor or NULL if
reading failed
- _readImageData Reads body from an inrmage whose header has been read by
_readImageHeader
- _readImageHeader Reads header from an image file
If file is an inrimage, only header is read
- _readNonInterlacedFileData Reads body from a non-interlaced vectorial inrimage whose header has
been read by _readImageHeader
- _readNonInterlacedImage Reads an image from a file and returns an image descriptor or NULL if
reading failed
- _readNonInterlacedImageData Reads body from a vectorial inrimage whose header has been read by
_readImageHeader
- _writeImage Writes given image in file 'name'
- _writeInrimageData Writes the given image body in an already opened file
- _writeInrimageHeader Writes the given inrimage header in an already opened file
- abs compute image absolute value (the absolute value of each
vector component is computed for vectorial images)
- add voxel by voxel adds inr to this
- add adds a constant value to image voxels
- anisotropicDiffusion anisotropic diffusion in 2D and 3D images
- AOS AOS Numerical scheme for fast semi-implicit computation
- AOSGauss Gaussian smoothing to ensure the stability of the process
- binarize Binarizes an image
- binarize Binarizes an image and changes its type
- binarize Binarizes an image
- binarize Binarizes an image
- closing Closing of an image
- closing Closing of an image
- closing Closing of an image
- closing Closing of an image
- computeSn computes recursive filter coefficients
- convolute convolutes this inrimage with given filter
- createImageGradientDirection gradient computing
- cropHistogramm thresholds image grey levels between min and max values
voxels lower than min or higher than max value are set to bg color
other voxels remain unchanged
- curvature compute image curvature in XY plane
(Ixx*Iy^2 - 2*Ix*Iy*Ixy + Iyy*Ix^2) / (Ix^2 + Iy^2)^(3/2)
- derive Derivation by finite differences, absolute value of the result
- diffusivity Diffusivity functions computation
- dilation Dilation of an image
- dilation Dilation of an image
- dilation Dilation of an image
- dilation Dilation of an image
- div voxel by voxel divides inr to this
- div divides image voxels by a constant value
- erosion Erosion of an image
- erosion Erosion of an image
- erosion Erosion of an image
- erosion Erosion of an image
- fastGradient2DRecursiveImage gradient computing. no orthogonal smoothing, ie partial derivatives.
- fastGradient3DRecursiveImage gradient computing. no orthogonal smoothing, ie partial derivatives.
- fft Applied on a scalar image, computes the direct Discrete Fourrier
Transform (DFT) and return a 2 components vectorial image whose
first component is real coefficients and second components is
imaginary coefficients of DFT
- fill fills in contours with fg color
- filterRecursiveLine filters one image line
- getConnectedComponentBinary Perfoms connected component computation on a binary image
- getConnectedComponentThreshold Perfoms connected component computation on a binary image
- getHysteresisThresholding Perfoms hysteresis thresholding connected component computation on a
binary image
- gradient computes this inrimage gradient using recursive filtering and
return result in directions buffer
- gradient computes this inrimage gradient and norm using recursive filtering and
return result in out buffer
- gradient2DRecursiveImage gradient computing
- gradient2DSobelImage gradient computing
- gradient3DRecursiveImage gradient computing
- gradient3DSobelImage gradient computing
- ImageIO_alloc call allocation routine
- ImageIO_close replaces fclose function
- ImageIO_free call deallocation routine
- ImageIO_read replaces fread function
- ImageIO_seek replaces fseek function
- ImageIO_write replaces fwrite function
- imageType return image type in given file
- InitRecursiveFilter initializes recursive filter values
- inv negate image (negate each voxel)
- invTopHat Inverse Top Hat Transform of an image
- invTopHat Inverse Top Hat Transform of an image
- invTopHat Inverse Top Hat Transform of an image
- invTopHat Inverse Top Hat Transform of an image
- keepGradientExtrema gradient computing
- laplacian computes image laplacian using recursive filters
- logicalAnd logical and operator (this &= inr)
- logicalNot logical not operator (this = !this)
- logicalOr logical or operator (this |= inr)
- logicalXor logical xor operator (this ^= inr)
- medianFiltering apply a median filtering on inputImage image and stores the result in
outputImage image
- medianFiltering apply a median filtering on image
- medianFiltering apply a median filtering on image
- medianFiltering apply a median filtering on image
- morphologicalDilation avec element structurant
- morphologicalGradient Morphological Gradient of an image
- morphologicalGradient Morphological Gradient of an image
- morphologicalGradient Morphological Gradient of an image
- morphologicalGradient Morphological Gradient of an image
- morphologicalLowerGradient Morphological Lower Gradient of an image
- morphologicalLowerGradient Morphological Lower Gradient of an image
- morphologicalLowerGradient Morphological Lower Gradient of an image
- morphologicalLowerGradient Morphological Lower Gradient of an image
- morphologicalUpperGradient Morphological Upper Gradient of an image
- morphologicalUpperGradient Morphological Upper Gradient of an image
- morphologicalUpperGradient Morphological Upper Gradient of an image
- morphologicalUpperGradient Morphological Upper Gradient of an image
- mul voxel by voxel multiplicates inr to this
- mul multiplicates image voxels by a constant value
- opening Opening of an image
- opening Opening of an image
- opening Opening of an image
- opening Opening of an image
- quantile Computation of a quantile of the cumulated gradient histogram
- readInrimageHeader read header from an opened inrimage file
- readMTLVector Read MTL Vector from disk
- recursiveFilter applies a recursive filter on this image
- recursiveFilterAlloc allocates recursive filter descriptor
- resample4x4CSpline Resampling function with 4x4 matrix
- resample4x4Nearest Resampling function with 4x4 matrix
- resample4x4TriLinear Resampling function with 4x4 matrix
- resampleDefCSpline Resampling function with 4x4 matrix and deformations
- resampleDefNearest Resampling function with 4x4 matrix and deformations
- resampleDefTriLinear Resampling function with 4x4 matrix and deformations
- setImageIOAllocationRoutines set allocation and deallocation routines
- setValue set an image to a value
- sobel computes this inrimage gradient using sobel filters and
return result in out buffer
- sub substractss a constant value from image voxels
- sub voxel by voxel substracts inr to this
- Tclinrimage_Init the routine that initialize the tclInrimage Module
- ternarize Applies a double thresholding on this image
- ternarize Applies a double thresholding on this image
- ternarize Applies a double thresholding on this image
- ternarize Applies a double thresholding on this image
- threshold thresholds image grey levels between min and max values
If the voxels values are denoted by v
Background is defined by: v < min || v > max
Foreground is defined by: v >= min && v <= max
Background voxels will be set to bg color, while foreground
voxels will be set to fg color
If the voxel max value is NULL, this function is equivalent
to void threshold(Inrimage *inr, Voxel *min, Voxel *bg, Voxel *fg );
- threshold thresholds image grey levels above min value
If the voxels values are denoted by v
Background is defined by: v < min
Foreground is defined by: v >= min
Background voxels will be set to 0, while foreground
voxels will be set to the maximum value (depending on the word type)
- threshold thresholds image grey levels between min and max values
If the voxels values are denoted by v
Background is defined by: v < min || v > max
Foreground is defined by: v >= min && v <= max
Background voxels will be set to 0, while foreground
voxels will be set to the maximum value (depending on the word type)
- threshold thresholds image grey levels above min value
If the voxels values are denoted by v
Background is defined by: v < min
Foreground is defined by: v >= min
Background voxels will be set to bg color, while foreground
voxels will be set to fg color
- threshold thresholds image grey levels between min and max values,
and changes its type
- threshold thresholds image grey levels between min and max values
If the voxels values are denoted by v
Background is defined by: v < min ( || v > max if max is provided)
Foreground is defined by: v >= min ( && v <= max if max is provided)
Background voxels will be set to 0, while foreground
voxels will be set to the maximum value (depending on the word type)
If the voxel max value is NULL, this function is equivalent
to void threshold(Inrimage *inr, Voxel *min );
- topHat Top Hat Transform of an image
- topHat Top Hat Transform of an image
- topHat Top Hat Transform of an image
- topHat Top Hat Transform of an image
- watershed Watershed of an image
- windowing apply a windowing of an image given min and max values : the output image is an unsigned char image having the same size as the original image : original voxels having a grey value less than min are set to min, those having a grey value greater than max are set to 255 and a linear scaling is applied otherwise
- writeMTLVector Write MTL vector to disk
Variables
Macros
Enums, Unions, Structs
hierarchy of classes
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