File List

Here is a list of all files with brief descriptions:

accl_mario_orient.cpp
accls_relations.cpp
calc_collar_angles.cpp
calc_joint_angle.cpp	Functions to calculate collar angles
calc_plate1_frame.cpp	Function to calculate the homogenous transformation matrix for base link of collar
calc_points_in_base.cpp	Function to convert coordinates of all points in tib structure on given collar to co-ordinates in frame fixed to left-most link of the collar
clean_opti_data.cpp	Functions to clean Optical Marker Data and re-assign labels
cleanopti.cpp
convert_opti_to_mario.cpp	Convert optical markers coordinates to MARIONET frame
create-ficentre.h [code]
dataprocess.h [code]	Functions to process data
ekf.h [code]
ekf_func.cpp	File with functions necessary to perform necessary EKF steps
femur_ekf_begin.cpp	File containing funtions to set initial values for kalman filter on femur
filter_accl_data.cpp	Functions to filter accelerometer (accleration) data with active_wire system
filter_data.cpp	File containing functions necessary to filter data
filteraccl.cpp
filteropti.cpp
filterpass.cpp
first_local_extrema.cpp	Find the first local extrema in the vector of doubles
foot-pressure.h [code]	Header file to define data type for foot pressure sensor
generate_jacob_fem.cpp	File to generate Jacobian matrix and measurement vector for EKF (for femur)
generate_jacob_theta_fem.cpp	File to generate Jacobian matrix and measurement vector for EKF (for femur) to calculate collar joint angles
generate_jacob_theta_tib_low.cpp	File to generate Jacobian matrix and measurement vector for EKF (for tibia lower collar) to calculate collar joint angles
get_trans_matrix.cpp	Functions to find transfomations matrix for motion of >=3 points
init_accls.cpp	This file contains the function definitions needed to initialize the accelerometers
init_accls.h [code]
load_accl_data.cpp	Load Accelerometer Data for Postprocessing
load_active_data.cpp	Load Active wire Data for Postprocessing
load_all_measures.cpp	Functions to load all sensor data
load_collar_accl_data.cpp	Load acclerometer data into tib/femur structure
load_collar_active_data.cpp	Functions to load active wire data into tib/femur structures
load_collar_calibs.cpp	Load Calibrated Collar Data:
load_collar_opti_data.cpp	Load optical into tib/femur structures
load_collar_passive_data.cpp	Functions to load passive wire data into tib/femur structures
load_mario_frame_opti.cpp	Functions to load and convert from optical frame to MARIONET frame
load_opti_data.cpp	Functions to load optical marker data into data vector
load_passive_data.cpp	Load Active wire Data for Postprocessing
lowerleg.cpp	File encapsulating all function files
lowerleg_func.cpp	File with functions for reading tibia and femur from config file
lowerleg_func.h [code]	Declarations for functions necessary to read structures from config files
lowerleg_func_old.cpp
lowerleg_struct.h [code]	Structures for human leg measurement
matrix_tools.cpp	Tools for matrix manipulation with GSL
matrix_tools.h [code]
postprocess.h [code]	File with declarations for post-processing functions
quaternion-tools.cpp	Functions for quaternion operations
read-foot-pressure.cpp	Functions to read in-shoe pressure sensors into tibia structure
read_all_wire_bases.cpp
README
realignaccl.cpp
rotation-tools.c	Functions to calculate various Rotation matrices
run_kalman_fem_theta.cpp	File containing funtions to implement kalman filter on femur
run_kalman_femur.cpp	File containing funtions to implement kalman filter on femur
run_kalman_tib_low_theta.cpp	File containing funtions to implement kalman filter on tibia lower collar to get theta angles
solver-tools.c
sync_opti_active.cpp	Functions to sync optical and passive data with active_wire system
testfile.cpp
testopti.cpp