Publications of Deepesh Agarwal
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Publications of Deepesh Agarwal
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Deepesh Agarwal,
Christelle Caillouet,
David Coudert,
and Frédéric Cazals.
Unveiling Contacts within Macro-molecular assemblies by solving Minimum Weight Connectivity Inference Problems.
Molecular and Cellular Proteomics,
14:2274-2284,
April 2015.
[WWW
] [PDF
]
Keywords:
Biophysics,
Bioinformatics,
Mathematical Modeling,
connectivity inference,
Algorithms,
Mass Spectrometry,
Structural Biology.
[Abstract] [bibtex-entry]
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D. Agarwal,
J. Araujo,
C. Caillouet,
F. Cazals,
D. Coudert,
and S. Perennes.
Connectivity Inference in Mass Spectrometry based Structure Determination.
In H.L. Bodlaender and G.F. Italiano, editors,
European Symposium on Algorithms,
volume 8125 of Lecture Notes in Computer Science - LNCS,
Sophia-Antipolis, France, France,
pages 289-300,
2013.
Springer.
[WWW
] [bibtex-entry]
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Deepesh Agarwal,
Christelle Caillouet,
David Coudert,
and Frédéric Cazals.
Unveiling Contacts within Macro-molecular assemblies by solving Minimum Weight Connectivity Inference Problems.
Research Report RR-8622,
Inria,
October 2014.
[WWW
] [PDF
]
Keywords:
Molecular machines,
Mixed integer linear program,
Biophysics,
Mass spectrometry,
Protein assembly,
Structural biology,
Connectivity Inference Connected induced sub-graphs.
[bibtex-entry]
-
D. Agarwal,
J. Araujo,
C. Caillouet,
F. Cazals,
D. Coudert,
and S. Pérennes.
Connectivity Inference in Mass Spectrometry based Structure Determination.
Research Report RR-8320,
INRIA,
June 2013.
[WWW
] [PDF
] [bibtex-entry]
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Last modified: Sat Jan 29 19:00:43 2022
