% % % % automatically generated % % /proj/asclepios/home/bin/bibtex2html -w bib-archive/biblio-til-2013.bib bib-archive/post2013_not_in_hal.bib import_13.bib authors_to_be_indexed.cfg html_formatting.cfg same_authors.cfg -use-html-links -icons -force % Date: Fri Apr 26 00:30:06 2024 % Author: epione-publi % % % @BOOK{ayache:hal-03111667, OPTADDRESS = {}, AUTHOR = {Nicholas Ayache and Alain Damasio and Yuval Noah Harari and Cathy O'Neil and Nicolas Revel}, OPTEDITION = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, PUBLISHER = {Flammarion}, SERIES = {Champs Actuel}, TITLE = {Nouvelle enquête sur l'intelligence artificielle}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03111667}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @BOOK{pennec:hal-02341896, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Stephan Sommer and Tom Fletcher}, OPTEDITION = {}, EDITOR = {Xavier Pennec and Stefan Sommer and Tom Fletcher}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PUBLISHER = {Academic Press}, OPTSERIES = {}, TITLE = {Riemannian Geometric Statistics in Medical Image Analysis}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, DOI = {10.1016/C2017-0-01561-6}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02341896}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @BOOK{zhu:hal-02341877, OPTADDRESS = {}, AUTHOR = {Dajiang Zhu and Jingwen Yan and Heng Huang and Li Shen and Paul M. Thompson and Carl-Fredrik Westin and Xavier Pennec and Sarang Joshi and Mads Nielsen and Tom Fletcher and Stanley Durrleman and Stefan Sommer}, OPTEDITION = {}, EDITOR = {Dajiang Zhu and Jingwen Yan and Mads Nielsen and Tom Fletcher and Stanley Durrleman and Stefan Sommer and Heng Huang and Li Shen and Paul M. Thompson and Carl-Fredrik Westin and Xavier Pennec and Sarang Joshi}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science (LNCS)}, TITLE = {Multimodal Brain Image Analysis and Mathematical Foundations of Computational Anatomy}, VOLUME = {11846}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-33226-6}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Approximation methods, Artificial intelligence, Biomedical imaging, Statistical models, Principal component analysis, Neural networks, Machine learning, Imaging genetics, Image segmentation, Image registration, Image reconstruction, Image processing, Image fusion, Statistics of surfaces, Computational anatomy}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02341877}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{bauer:hal-01923588, OPTADDRESS = {}, AUTHOR = {Martin Bauer and Nicolas Charon and Philipp Harms and Boris Khesin and Alice Le Brigant and Elodie Maignant and Stephen Marsland and Peter Michor and Xavier Pennec and Stephen C. Preston and Stefan Sommer and François-Xavier Vialard}, OPTEDITOR = {}, MONTH = {November}, NOTE = {27 pages, 4 figures}, OPTNUMBER = {}, OPTORGANIZATION = {}, PUBLISHER = {Published by the authors}, OPTSERIES = {}, TITLE = {Math in the Black Forest: Workshop on New Directions in Shape Analysis}, OPTVOLUME = {}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01923588}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @BOOK{cardoso:hal-01597839, OPTADDRESS = {}, AUTHOR = {Jorge M. Cardoso and Tal Arbel and Enzo Ferrante and Xavier Pennec and Adrian V., Dalca and Sarah Parisot and Sarang Joshi and Nematollah K. Batmanghelich and Aristeidis Sotiras and Mads Nielsen and Mert Sabuncu and Fletcher Tom and Li Shen and Stanley Durrleman and Stefan Sommer}, OPTEDITION = {}, EDITOR = {Jorge Cardoso and Tal Arbel and Mert Sabuncu and Fletcher Tom and Li Shen and Stanley Durrleman and Stefan Sommer and Enzo Ferrante and Xavier Pennec and Dalca Adrian V. and Sarah Parisot and Sarang Joshi and Nematollah Batmanghelich and Aristeidis Sotiras and Mads Nielsen}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, PUBLISHER = {}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics}, VOLUME = {10551}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-67675-3}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Data mining, Face recognition, Feature selection, Geometry, Image analysis, Image processing, Image reconstruction, Learning systems, Medical images, Medical imaging, Neural networks, Pattern recognition, Signal processing, Computer vision, Cluster analysis, Clustering algorithms, Artificial intelligence, Bayesian networks, Classification}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01597839}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{pop:hal-01800814, ADDRESS = {France}, AUTHOR = {Mihaela Pop and Maxime Sermesant and Pierre-Marc Jodoin and Alain Lalande and Xiahai Zhuang and Guang Yang and Alistair A Young and Olivier Bernard}, BOOKTITLE = {Statistical Atlases and Computational Models of the Heart. ACDC and MMWHS Challenges}, EDITOR = {Mihaela Pop and Maxime Sermesant and Pierre-Marc Jodoin and Alain Lalande and Xiahai Zhuang and Guang Yang and Alistair Young and Olivier Bernard}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {260}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {Statistical Atlases and Computational Models of the Heart. ACDC and MMWHS Challenges}, OPTVOLUME = {}, YEAR = {2017}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01800814}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @BOOK{ayache:hal-01170613, OPTADDRESS = {}, AUTHOR = {Nicholas Ayache}, OPTEDITION = {}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {80}, PUBLISHER = {Collège de France / Fayard}, SERIES = {Leçons inaugurales du Collège de France}, TITLE = {Des images médicales au patient numérique}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01170613}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @BOOK{paragios:inria-00616178, OPTADDRESS = {}, AUTHOR = {Nikos Paragios and Jim Duncan and Nicholas Ayache}, OPTEDITION = {}, EDITOR = { Paragios and Nikos and Duncan and Jim and Ayache and Nicholas}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {590}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {Handbook of Biomedical Imaging: Methodologies and Clinical Research}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-0-387-09749-7}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/inria-00616178}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{camara:hal-01244233, ADDRESS = {Boston, United States}, AUTHOR = {Oscar Camara and Tommaso Mansi and Mihaela Pop and Kawal Rhode and Maxime Sermesant and Alistair Young}, BOOKTITLE = {Statistical Atlases and Computational Models of the Heart}, EDITOR = {Oscar Camara and Tommaso Mansi and Mihaela Pop and Kawal Rhode and Maxime Sermesant and Alistair Young}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {296}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Statistical Atlases and Computational Models of the Heart - Imaging and Modelling Challenges}, VOLUME = {8896}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-14678-2}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01244233}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{durrleman:hal-01114150, ADDRESS = {Cambridge, United States}, AUTHOR = {Stanley Durrleman and Thomas P. Fletcher and Guido Gerig and Marc Niethammer and Xavier Pennec}, BOOKTITLE = {STIA 2014 - Spatio-temporal Image Analysis for Longitudinal and Time-Series Image Data}, EDITOR = {Stanley Durrleman and Thomas P. Fletcher and Guido Gerig and Marc Niethammer and Xavier Pennec}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {89}, PUBLISHER = {Springer International Publishing}, SERIES = {Lecture notes in computer science}, TITLE = {Spatio-temporal Image Analysis for Longitudinal and Time-Series Image Data}, VOLUME = {8682}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-14905-9}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01114150}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{pennec:hal-01203812, ADDRESS = {Munich, Germany}, AUTHOR = {Xavier Pennec and Sarang Joshi and Mads Nielsen and Thomas P. Fletcher and Stanley Durrleman and Stefan Sommer}, BOOKTITLE = {Mathematical Foundations of Computational Anatomy (MFCA 2015)}, EDITOR = { Pennec and Xavier and Joshi and Sarang and Nielsen and Mads and Fletcher and Thomas P. and Durrleman and Stanley and Sommer and Stefan}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {173}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Proceedings of the fifth international workshop on Mathematical Foundations of Computational Anatomy (MFCA 2015)}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01203812/file/MFCA15_Proceedings.pdf}, X-INTERNATIONAL-AUDIENCE = {}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01203812}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @BOOK{menze:hal-00912655, OPTADDRESS = {}, AUTHOR = {Bjoern H. Menze and Georg Langs and Le Lu and Albert Montillo and Zhuowen Tu and Antonio Criminisi}, OPTEDITION = {}, MONTH = {February}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {294}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Medical Computer Vision: Recognition techniques and applications in medical imaging. Proceedings of the MICCAI 2012 Workshop on Medical Computer Vision (MCV 2012)}, VOLUME = {7766}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-36620-8}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00912655}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @BOOK{pennec:hal-00873631, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Sarang Joshi and Mads Nielsen and Thomas P. Fletcher and Stanley Durrleman and Stefan Sommer}, OPTEDITION = {}, EDITOR = { Pennec and Xavier and Joshi and Sarang and Nielsen and Mads and Fletcher and Tom P. and Durrleman and Stanley and Sommer and Stefan}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {132}, PUBLISHER = {Inria}, OPTSERIES = {}, TITLE = {Proceedings of the Fourth International Workshop on Mathematical Foundations of Computational Anatomy - Geometrical and Statistical Methods for Biological Shape Variability Modeling (MFCA 2013), Nagoya, Japan}, OPTVOLUME = {}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00873631/file/MFCA2013_Proceedings.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00873631}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{menze:hal-00912934, ADDRESS = {Nagoya, Japan}, AUTHOR = {Bjoern Menze and Mauricio Reyes and Andras Jakab and Elisabeth Gerstner and Justin Kirby and Keyvan Farahani}, BOOKTITLE = {MICCAI Challenge on Multimodal Brain Tumor Image Segmentation (BRATS)}, EDITOR = {Bjoern Menze and Mauricio Reyes and Andras Jakab and Elisabeth Gerstner and Justin Kirby and Keyvan Farahani}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {57}, PUBLISHER = {MICCAI}, OPTSERIES = {}, TITLE = {Proceedings of the MICCAI Challenge on Multimodal Brain Tumor Image Segmentation (BRATS) 2013}, OPTVOLUME = {}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00912934/file/proc_brats_2013.pdf}, X-INTERNATIONAL-AUDIENCE = {}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00912934}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{Pennec:MFCAProcs:11, ADDRESS = {Toronto, Canada}, EDITOR = {Xavier Pennec and Sarang Joshi and Mads Nielsen}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Proceedings of the Third International Workshop on Mathematical Foundations of Computational Anatomy - Geometrical and Statistical Methods for Modelling Biological Shape Variability}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/events/MFCA11/Proceedings/MFCA11_Proceedings.pdf}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {US}, X-PROCEEDINGS = {yes}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813806}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{STACOM:2010, OPTADDRESS = {}, BOOKTITLE = {STACOM/CESC}, EDITOR = {Oscar Camara and M. Pop and Kawal Rhode and Maxime Sermesant and Nic Smith and Alistair A. Young}, OPTMONTH = {}, NOTE = {Held in Conjunction with MICCAI 2010, Beijing, China, September 20, 2010}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {292}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Statistical Atlases and Computational Models of the Heart, First International Workshop, STACOM 2010, and Cardiac Electrophysiological Simulation Challenge, CESC 2010}, VOLUME = {6364}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, ISBN = {978-3-642-15834-6}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616062}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{miccai-mcv:2010, ADDRESS = {Beijing, China}, EDITOR = {Bjoern H. Menze and Georg Langs and Zhuowen Tu and Antonio Criminisi}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Medical Computer Vision: Recognition techniques and applications in medical imaging -- MICCAI-MCV 2010}, VOLUME = {6533}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {}, X-PAYS = {US,GB}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616061}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{FIMH:2009, ADDRESS = {Nice, France}, EDITOR = {Nicholas Ayache and Hervé Delingette and Maxime Sermesant}, MONTH = {June}, NOTE = {537 pages}, OPTNUMBER = {}, OPTORGANIZATION = {}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Functional Imaging and Modeling of the Heart - FIMH 2009}, VOLUME = {5528}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616060}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{Pennec:MFCAProcs:08, ADDRESS = {New York, USA}, EDITOR = {Xavier Pennec and Sarang Joshi}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Proceedings of the Second International Workshop on Mathematical Foundations of Computational Anatomy - Geometrical and Statistical Methods for Modelling Biological Shape Variability}, OPTVOLUME = {}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/events/MFCA08/Proceedings/MFCA08_Proceedings.pdf}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {US}, X-PROCEEDINGS = {yes}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00846316}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{miccai:i:2007, ADDRESS = {Brisbane, Australia}, EDITOR = {Nicholas Ayache and Sébastien Ourselin and Anthony Maeder}, MONTH = {October}, NOTE = {1001 pages}, OPTNUMBER = {}, OPTORGANIZATION = {}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007 - Part I}, VOLUME = {4791}, YEAR = {2007}, OPTABSTRACT = {}, DOI = {10.1007/978-3-540-75757-3}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616018}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{miccai:ii:2007, ADDRESS = {Brisbane, Australia}, EDITOR = {Nicholas Ayache and Sébastien Ourselin and Anthony Maeder}, MONTH = {October}, NOTE = {977 pages}, OPTNUMBER = {}, OPTORGANIZATION = {}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007 - Part II}, VOLUME = {4792}, YEAR = {2007}, OPTABSTRACT = {}, DOI = {10.1007/978-3-540-75759-7}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616018}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{Delingette:MICCAIworkshop:06, OPTADDRESS = {}, EDITOR = {Hervé Delingette and Alejandro Frangi}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Proceedings of the MICCAI Workshop - From Statistical Atlases to Personalized Models: Understanding Complex Diseases in Populations and Individuals}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00614988}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{Pennec:MFCAProcs:06, ADDRESS = {Copenhagen, Denmark}, EDITOR = {Xavier Pennec and Sarang Joshi}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Proceedings of the First International Workshop on Mathematical Foundations of Computational Anatomy - Geometrical and Statistical Methods for Modelling Biological Shape Variability}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/MFCA06.pdf}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813806}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @BOOK{Ayache:book:2003, OPTADDRESS = {}, OPTEDITION = {}, EDITOR = {N. Ayache}, OPTMONTH = {}, NOTE = {670 pages}, OPTNUMBER = {}, PUBLISHER = {Elsevier}, SERIES = {Handbook of Numerical Analysis (Ph. Ciarlet series editor)}, TITLE = {Computational Models for the Human Body}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{IS4TM:03, ADDRESS = {Juan-les-Pins, France}, EDITOR = {N. Ayache and H. Delingette}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Proceedings of the International Symposium on Surgery Simulation and Soft Tissue Modeling}, VOLUME = {2673}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{Delingette:Paleo:02, ADDRESS = {Liege, Belgium}, EDITOR = {B. Marfart and H. Delingette and G. Subsol}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PUBLISHER = {BAR International Series 1049}, OPTSERIES = {}, TITLE = {Three Dimensional Imaging in PaleoAnthropology and Prehistoric Archeology}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @BOOK{Linguraru:Book:01, OPTADDRESS = {}, AUTHOR = {M.G. Linguraru and I. Moisil}, OPTEDITION = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PUBLISHER = {Consoft}, OPTSERIES = {}, TITLE = {Stiinta Sistemelor si a Calculatoarelor}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{Dugelay:ts:99, OPTADDRESS = {}, EDITOR = {J.L. Dugelay and G. Subsol}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Traitement du Signal - numéro spécial Réalité Virtuelle}, VOLUME = {16(1)}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{Subsol99.1, ADDRESS = {Laval (France)}, EDITOR = {G. Subsol}, MONTH = {June}, NOTE = {Version électronique : https://www-sop.inria.fr/epidaure/GT-RV/JT-GT-RV7}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {International Scientific Workshop on Virtual Reality and Prototyping}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{MB3IA98, ADDRESS = {IIT, Mumbai (Inde)}, EDITOR = {E. Cuchet and G. Subsol}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IEEE Computer Society}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Model-Based 3D Image Analysis}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{JTGTRV6.98, ADDRESS = {Issy-les-Moulineaux (France)}, EDITOR = {J. L. Dugelay and G. Eude and G. Subsol}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {6èmes Journées de Travail du GT Réalité Virtuelle}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.inria.fr/epidaure/GT-RV/gt-rv.html}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @BOOK{JTGTRV5.96, ADDRESS = {Toulouse (France)}, OPTEDITION = {}, EDITOR = {O. Balet and R. Caubet and J.-P. Jessel and G. Subsol}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, PUBLISHER = {IRIT}, OPTSERIES = {}, TITLE = {Journées Nationales Réalité Virtuelle}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PROCEEDINGS{CVRMed95, ADDRESS = {Nice, France}, EDITOR = {N. Ayache}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {First international conference on computer vision, virtual reality and robotics in medicine, CVRMed'95}, VOLUME = {905}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {}, X-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @BOOK{monhor93, OPTADDRESS = {}, AUTHOR = {O. Monga and R. Horaud}, OPTEDITION = {}, MONTH = {Août}, OPTNOTE = {}, OPTNUMBER = {}, PUBLISHER = {Editions Hermes (Traité des Nouvelles Technologies, série Informatique)}, OPTSERIES = {}, TITLE = {Vision par ordinateur, outils fondamentaux}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00590049/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @BOOK{levy92d, OPTADDRESS = {}, AUTHOR = {Lévy Véhel, J.}, OPTEDITION = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PUBLISHER = {SGDN}, OPTSERIES = {}, TITLE = {Etat de l'Art en Géométrie Fractale}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @BOOK{ayache91, OPTADDRESS = {}, AUTHOR = {N. Ayache}, OPTEDITION = {}, OPTMONTH = {}, NOTE = {342 pages}, OPTNUMBER = {}, PUBLISHER = {MIT-Press}, OPTSERIES = {}, TITLE = {Artificial Vision for Mobile robots - Stereo-vision and Multisensor Perception}, OPTVOLUME = {}, YEAR = {1991}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @BOOK{ayache-book89, OPTADDRESS = {}, AUTHOR = {Nicholas Ayache}, OPTEDITION = {}, OPTMONTH = {}, NOTE = {314 pages, in French}, OPTNUMBER = {}, PUBLISHER = {Inter-Editions (MASSON)}, OPTSERIES = {}, TITLE = {Vision Stéréoscopique et Perception Multisensorielle: Application à la robotique mobile}, OPTVOLUME = {}, YEAR = {1989}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{desrues:tel-04220830, OPTADDRESS = {}, AUTHOR = {Gaëtan Desrues}, MONTH = {March}, OPTNOTE = {}, NUMBER = {2023COAZ4030}, SCHOOL = {Université Côte d'Azur}, TITLE = {Personalised 3D electromechanical models of the heart for cardiac resynchronisation therapy planning in heart failure patients}, TYPE = {Theses}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Patient-specific simulation, Digital twin, ECG, CRT, Cardiac electrophysiology, Biomechanics, Finite element method, Artificial intelligence, Simulation personnalisée, Jumeau numérique, ECG, CRT, Électrophysiologie cardiaque, Biomécanique, Méthode des éléments finis, Intelligence artificielle}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-04220830/file/2023COAZ4030.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-04220830}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{fraboni:tel-04141520, OPTADDRESS = {}, AUTHOR = {Yann Fraboni}, MONTH = {May}, OPTNOTE = {}, NUMBER = {2023COAZ4033}, SCHOOL = {Université Côte d'Azur}, TITLE = {Reliability and robustness of federated learning in practical applications}, TYPE = {Theses}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Federated learning, Heterogeneous data, Privacy, Distributed optimization, Bias, Apprentissage fédéré, Données hétérogènes, Protection des données, Optimisation distribuée, Biais}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-04141520/file/2023COAZ4033.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-04141520}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{hamzaoui:tel-04166332, OPTADDRESS = {}, AUTHOR = {Dimitri Hamzaoui}, MONTH = {June}, OPTNOTE = {}, NUMBER = {2023COAZ4044}, SCHOOL = {Université Côte d'Azur}, TITLE = {AI-based diagnosis of prostate cancer from multiparametric MRI}, TYPE = {Theses}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Machine learning, Prostate-cancer, Inter-expert variability, Segmentation, Consensus, Medical imaging, Artificial intelligence, Apprentissage profond, Prostate-cancer, Variabilité inter-expert, Segmentation, Consensus, Imagerie médicale, Intelligence artificielle}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/tel-04166332v2/file/2023COAZ4044.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/tel-04166332}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{haxholli:tel-04416188, OPTADDRESS = {}, AUTHOR = {Etrit Haxholli}, MONTH = {October}, OPTNOTE = {}, NUMBER = {2023COAZ4083}, SCHOOL = {Université Côte d'Azur}, TITLE = {Scalable and flexible density estimation for complex data distributions}, TYPE = {Theses}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Density estimation, Normalizing flows, Diffusion models, Extreme value theorie, Tail modelling, Loss function distributions, Peaks-over-threshold, Cross-tail-estimation, Estimation de la densité, Flux de normalisation, Modèles de diffusion, Théorie des valeurs extrêmes, Modélisation de la queue, Distributions de la fonction de perte, Pics-au-dessus-du-seuil, Estimation de la queue croisée}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-04416188v2/file/2023COAZ4083.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-04416188}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{kashtanova:tel-04176798, OPTADDRESS = {}, AUTHOR = {Victoriya Kashtanova}, MONTH = {June}, OPTNOTE = {}, NUMBER = {2023COAZ4043}, SCHOOL = {Université Côte d'Azur}, TITLE = {Learning cardiac electrophysiology dynamics with PDE-based physiological constraints for data-driven personalised predictions}, TYPE = {Theses}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Physics-based learning, Deep learning, Cardiac electrophysiology, Model personalisation, PDE, Simulations, Apprentissage basé sur la physique, Apprentissage profond, Electrophysiologie cardiaque, Personnalisation de modèle, EDP, Simulations}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/tel-04176798v2/file/2023COAZ4043.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/tel-04176798}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{maignant:tel-04452790, OPTADDRESS = {}, AUTHOR = {Elodie Maignant}, MONTH = {December}, OPTNOTE = {}, NUMBER = {2023COAZ4096}, SCHOOL = {Université Côte d'Azur}, TITLE = {Barycentric embeddings for geometric manifold learning : with application to shapes and graphs}, TYPE = {Theses}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Geometric learning, Riemannian and barycentric geometry, Manifold learning, Quotient manifolds, Kendall shape spaces, Statistical graph analysis, Apprentissage géométrique, Géométrie riemannienne et barycentrique, Apprentissage de variétés, Variétés quotient, Espaces de formes de Kendall, Analyse statistique de graphes}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-04452790v2/file/2023COAZ4096.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-04452790}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{pedersen:tel-04391602, OPTADDRESS = {}, AUTHOR = {Morten Akhoj Pedersen}, MONTH = {November}, OPTNOTE = {}, SCHOOL = {INRIA Sophia-Antipolis ; University of Copenhagen}, TITLE = {Riemannian and sub-Riemannian methods for dimension reduction}, TYPE = {Theses}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Differential geometry, Riemannian geometry, Sub-Riemannian geometry, Geometric statistics, Mathematical statistics, Machine learning, Statistiques géométriques, Géométrie différentielle, Géométrie Riemannienne, Géométrie sous-Riemannienne, Statistique mathématique, Apprentissage automatique}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-04391602/file/Thesis-2.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-04391602}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{silvarincon:tel-04417044, OPTADDRESS = {}, AUTHOR = {Silva Rincon, Santiago Smith}, MONTH = {July}, OPTNOTE = {}, SCHOOL = {UCA, Inria}, TITLE = {Federated Learning of Biomedical Data in Multicentric Imaging Studies}, TYPE = {Theses}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {federated learning, healthcare, data protection, GDPR, CCPA, medical imaging, data harmonization, meta-analysis, mega-analysis, Fed-BioMed, Bayesian optimization, random effect models, FedComBat, apprentissage fédéré, santé, protection des données, RGPD, CCPA, imagerie médicale, harmonisation des données, méta-analyse, méganalyse, Fed-BioMed, optimisation bayésienne, modèles à effets aléatoires, FedComBat}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/tel-04417044v2/file/PhD_Manuscript_Santiago_SILVA.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/tel-04417044}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{tourniaire:tel-04189450, OPTADDRESS = {}, AUTHOR = {Paul Tourniaire}, MONTH = {June}, OPTNOTE = {}, NUMBER = {2023COAZ4041}, SCHOOL = {Université Côte d'Azur}, TITLE = {AI-based selection of imaging and biological markers predictive of therapy response in lung cancer}, TYPE = {Theses}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Digital pathology, Multiple instance learning, Mixed supervision, Deep learning, Survival analysis, Lung cancer, Immunotherapy, Histopathologie numérique, Apprentissage multi-instance, Supervision mélangée, Apprentissage profond, Analyse de survie, Cancer du poumon, Immunothérapie}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-04189450v2/file/2023COAZ4041.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-04189450}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{yang:tel-04422777, OPTADDRESS = {}, AUTHOR = {Yingyu Yang}, MONTH = {December}, OPTNOTE = {}, NUMBER = {2023COAZ4107}, SCHOOL = {Université Côte d'Azur}, TITLE = {Automatic analysis of cardiac function with artificial intelligence : multimodal approach for portable echocardiographic devices}, TYPE = {Theses}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac function analysis, Deep learning, Echocardiography segmentation, Echocardiography motion tracking, Electrocardiogram decomposition, Multi-modal learning, Deep learning with uncertainty, Analyse de la fonction cardiaque, Apprentissage profond, Segmentation de l'échocardiographie, Suivi du mouvement en échocardiographie, Décomposition de l'électrocardiogramme, Apprentissage multimodal, Apprentissage profond avec incertitude}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/tel-04422777v2/file/2023COAZ4107.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/tel-04422777}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{dadoun:tel-03984539, OPTADDRESS = {}, AUTHOR = {Hind Dadoun}, MONTH = {December}, OPTNOTE = {}, NUMBER = {2022COAZ4071}, SCHOOL = {Université Côte d'Azur}, TITLE = {AI-based analysis of abdominal ultrasound images to support medical diagnosis}, TYPE = {Theses}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Ultrasound imaging, Bayesian learning, Object detection, Self-supervised learning, Semi-supervised learning, Natural language processing, Imagerie ultrasonore, Apprentissage bayésien, Détection d'objets, Apprentissage auto-supervisé, Apprentissage semi-supervisé, Traitement du langage naturel}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/tel-03984539v2/file/2022COAZ4071.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/tel-03984539}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{jousse:tel-03890672, OPTADDRESS = {}, AUTHOR = {Florent Jousse}, MONTH = {September}, OPTNOTE = {}, NUMBER = {2022COAZ4052}, SCHOOL = {Université Côte d'Azur}, TITLE = {Statistical modeling of face morphology for dermatology and plastic surgery}, TYPE = {Theses}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Statistical shape modeling, Shape registration, Face modeling, Geodesic kernel, Disentangled learning, Partial least squares, Modélisation statistique de forme, Recalage de formes, Modélisation du visage, Noyau géodésique, Démêlage de représentations, Moindres carrés partiels}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-03890672/file/2022COAZ4052.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-03890672}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{ly:tel-04088542, OPTADDRESS = {}, AUTHOR = {Buntheng Ly}, MONTH = {December}, OPTNOTE = {}, NUMBER = {2022COAZ4105}, SCHOOL = {Université Côte d'Azur}, TITLE = {Deep learning on large clinical databases for image-based predictions of cardiac arrhythmias}, TYPE = {Theses}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac arrhythmia, Artificial intelligence, Explainable learning, Cardiac imaging, Multi-modality, Arythmie cardiaque, Intelligence artificielle, Modèle explicable, Imagerie cardiaque, Multi-modalité}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-04088542/file/2022COAZ4105.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-04088542}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{thanwerdas:tel-03698752, OPTADDRESS = {}, AUTHOR = {Yann Thanwerdas}, MONTH = {May}, OPTNOTE = {}, NUMBER = {2022COAZ4024}, SCHOOL = {Université Côte d'Azur}, TITLE = {Riemannian and stratified geometries on covariance and correlation matrices}, TYPE = {Theses}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Riemannian geometry, Covariance matrices, Correlation matrices, Families of metrics, Geodesics, Stratified spaces, Géométrie riemannienne, Matrices de covariance, Matrices de corrélation, Familles de métriques, Géodésiques, Espaces stratifiés}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/tel-03698752v2/file/2022COAZ4024.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/tel-03698752}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{abinader:tel-03377153, OPTADDRESS = {}, AUTHOR = {Abi Nader, Clément}, MONTH = {June}, OPTNOTE = {}, NUMBER = {2021COAZ4033}, SCHOOL = {Université Côte d'Azur}, TITLE = {Modelling and simulating the progression of Alzheimer's disease through the analysis of multi-modal neuroimages and clinical data}, TYPE = {Theses}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Alzheimer's disease, Clinical trials, Magnetic resonance imaging, Positron emission tomography, Machine learning, Gaussian processes, Variational autoencoder, Dynamical systems, Maladie d'Alzheimer, Essais cliniques, Imagerie par résonance magnétique, Tomographie par émission de positons, Apprentissage automatique, Processus gaussiens, Auto-encodeur variationnel, Systèmes dynamiques}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-03377153v2/file/2021COAZ4033.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-03377153}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{antelmi:tel-03474169, OPTADDRESS = {}, AUTHOR = {Luigi Antelmi}, MONTH = {July}, OPTNOTE = {}, NUMBER = {2021COAZ4050}, SCHOOL = {Université Côte d'Azur}, TITLE = {Statistical learning on heterogeneous medical data with bayesian latent variable models : application to neuroimaging dementia studies}, TYPE = {Theses}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Alzheimer's disease, Neuro-imaging, Magnetic resonance imaging, Positron emission tomography, Variational autoencoder, Multi-task learning, High dimensional data, Maladie d'Alzheimer, Neuro-imagerie, Imagerie par résonnance magnétique, Tomographie par émission de positrons, Auto-encodeur variationnel, Apprentissage multi-tâche, Données de haute dimension, Données multimodales}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-03474169v2/file/2021COAZ4050.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-03474169}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{audelan:tel-03406789, OPTADDRESS = {}, AUTHOR = {Benoît Audelan}, MONTH = {July}, OPTNOTE = {}, NUMBER = {2021COAZ4054}, SCHOOL = {Université Côte d'Azur}, TITLE = {Probabilistic segmentation modelling and deep learning-based lung cancer screening}, TYPE = {Theses}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Medical imaging, Image segmentation, Artificial intelligence, Machine learning, Deep learning, Lung cancer, Imagerie médicale, Segmentation d'images, Intelligence artificielle, Apprentissage artificiel, Apprentissage profond, Cancer du poumon}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-03406789/file/2021COAZ4054.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-03406789}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{bacoyannis:tel-03621337, OPTADDRESS = {}, AUTHOR = {Tania Bacoyannis}, MONTH = {December}, OPTNOTE = {}, NUMBER = {2021COAZ4111}, SCHOOL = {Université Côte d'Azur}, TITLE = {Deep probabilistic generative model for the inverse problem of electrocardiography}, TYPE = {Theses}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac activation, Computational modelling, Data processing, Deep learning, Electrocardiography, Generative model, Inverse problem, Activation cardiaque, Apprentissage profond, Électrocardiographique, Modélisation numérique, Modèle génératif, Problème inverse, Traitement de données}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-03621337/file/2021COAZ4111.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-03621337}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{banus:tel-03242796, OPTADDRESS = {}, AUTHOR = {Jaume Banus}, MONTH = {May}, OPTNOTE = {}, NUMBER = {2021COAZ4030}, SCHOOL = {Université Côte d'Azur}, TITLE = {Heart & Brain. Linking cardiovascular pathologies and neurodegeneration with a combined biophysical and statistical methodology}, TYPE = {Theses}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Medical imaging, Cardiovascular modelling, Neurodegeneration, Lumped models, Machine learning, Variational autoencoder, Gaussian process, Personalisation, Imagerie médicale, Modélisation cardiovasculaire, Neurodégénérescence, Modèles regroupés, Apprentissage automatique, Autoencodeur variationnel, Processus Gaussien, Personnalisation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/tel-03242796v2/file/thesis.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/tel-03242796}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{guigui:tel-03563980, OPTADDRESS = {}, AUTHOR = {Nicolas Guigui}, MONTH = {November}, OPTNOTE = {}, NUMBER = {2021COAZ4081}, SCHOOL = {Université Côte d'Azur}, TITLE = {Computational methods for statistical estimation on Riemannian manifolds and application to the study of the cardiac deformations}, TYPE = {Theses}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Differential geometry, Computational anatomy, Geometric statistics, Géométrie différentielle, Anatomie computationnelle, Statistiques géométriques}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-03563980v2/file/2021COAZ4081.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-03563980}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{wang:tel-03827231, OPTADDRESS = {}, AUTHOR = {Zihao Wang}, MONTH = {September}, OPTNOTE = {}, NUMBER = {2021COAZ4120}, SCHOOL = {Université Côte d'Azur}, TITLE = {Deep generative learning for medical data processing, analysis and modeling : application to cochlea CT imaging}, TYPE = {Theses}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Generative learning, Bayesian learning, Stochastic flow, Deep learing, Generative learning, Apprentissage génératif, Apprentissage bayésien, Flux stochastique, Apprentissage profond, Apprentissage génératif}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-03827231v2/file/2021COAZ4120.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-03827231}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{cedilnik:tel-03147908, OPTADDRESS = {}, AUTHOR = {Nicolas Cedilnik}, MONTH = {December}, OPTNOTE = {}, NUMBER = {2020COAZ4097}, SCHOOL = {Université Côte d'Azur}, TITLE = {Image-based Personalised Models of Cardiac Electrophysiology for Ventricular Tachycardia Therapy Planning}, TYPE = {Theses}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Ventricular tachycardia, Model personalisation, Cardiac electrophysiology, Computed tomography, Tachycardie ventriculaire, Personnalisation de modèles, Électrophysiologie cardiaque, Imagerie tomodensitométrique}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/tel-03147908v2/file/2020COAZ4097.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/tel-03147908}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{krebs:tel-02954033, OPTADDRESS = {}, AUTHOR = {Julian Krebs}, MONTH = {June}, OPTNOTE = {}, NUMBER = {2020COAZ4032}, SCHOOL = {Université Côte d'Azur}, TITLE = {Robust medical image registration and motion modeling based on machine learning}, TYPE = {Theses}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Medical Image Registration, Motion Modeling, Machine Learning, Varitiaonal Autoencoder, Sudden Cardiac Death Risk, Recalage d'images médicales, Modélisation du mouvement, Apprentissage profond}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/tel-02954033v2/file/2020COAZ4032.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/tel-02954033}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{lorenzi:tel-03150585, OPTADDRESS = {}, AUTHOR = {Marco Lorenzi}, MONTH = {January}, OPTNOTE = {}, SCHOOL = {UCA}, TITLE = {Modelling pathological processes from heterogeneous and high-dimensional biomedical data}, TYPE = {Habilitation à diriger des recherches}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {statistical learning, medical imaging, brain, machine learning, Alzheimer's disease, federated learning, genetics, apprentissage statistique, imageie medicale, cerveau, apprentissage par ordinateurs, maladie d'Alzheimer, apprentissge féderé genetics}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/tel-03150585/file/hdr_2.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/tel-03150585}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{wei:tel-02862395, OPTADDRESS = {}, AUTHOR = {Wen Wei}, MONTH = {June}, OPTNOTE = {}, NUMBER = {2020COAZ4021}, SCHOOL = {Université Côte d'Azur}, TITLE = {Learning brain alterations in multiple sclerosis from multimodal neuroimaging data}, TYPE = {Theses}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Multiple Sclerosis, PET Imaging, MR Imaging, Brain Alterations, Deep Learning, Convolutional Neural Networks (CNN), Generative Adversarial Network (GAN), Image Synthesis, Missing MRI Sequences, Missing Modalities, Sclérose en Plaques, TEP, IRM, Altérations cérébrales, Apprentissage en profondeur, Réseau de Neurones Convolutifs (CNN), Réseaux Antagonistes Génératifs (GAN), Synthèse d'images, Séquences IRM Manquantes, Modalités Manquantes}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-02862395v2/file/2020COAZ4021.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-02862395}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{jia:tel-02428638, OPTADDRESS = {}, AUTHOR = {Shuman Jia}, MONTH = {December}, OPTNOTE = {}, NUMBER = {2019AZUR4105}, SCHOOL = {COMUE Université Côte d'Azur (2015 - 2019)}, TITLE = {Population-based models of shape, structure, and deformation in atrial fibrillation}, TYPE = {Theses}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac image analysis, Atrial fibrillation, Segmentation, Fat, Statistical shape analysis, Parallel transport, Analyse d'images cardiaques, Fibrillation auriculaire, Segmentation, Graisse, Analyse statistique des formes, Transport parallèle}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/tel-02428638v2/file/2019AZUR4105.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/tel-02428638}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{mlynarski:tel-02358374, OPTADDRESS = {}, AUTHOR = {Pawel Mlynarski}, MONTH = {November}, OPTNOTE = {}, NUMBER = {2019AZUR4084}, SCHOOL = {COMUE Université Côte d'Azur (2015 - 2019)}, TITLE = {Deep learning for segmentation of brain tumors and organs at risk in radiotherapy planning}, TYPE = {Theses}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Convolutional Neural Networks, Semi-supervised learning, MRI, Radiotherapy, Brain tumor, Organs at risk, Réseau neuronal convolutif, Apprentissage semi-supervisé, IRM, Radiothérapie, Tumeur cérébrale, Organes à risque}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/tel-02358374v2/file/2019AZUR4084.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/tel-02358374}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{sivera:tel-02389924, OPTADDRESS = {}, AUTHOR = {Raphaël Sivera}, MONTH = {November}, OPTNOTE = {}, NUMBER = {2019AZUR4082}, SCHOOL = {COMUE Université Côte d'Azur (2015 - 2019)}, TITLE = {Modeling and measuring the brain morphological evolution using structural MRI in the context of neurodegenerative diseases}, TYPE = {Theses}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Multivariate statistical analysis, Longitudinal models, Morphometry, Aging, Alzheimer's disease, MRI, Vieillissement, Maladie d'Alzheimer, IRM, Modèles longitudinaux, Statistiques multivariées, Morphométrie}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-02389924v2/file/2019AZUR4082.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-02389924}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{zheng:tel-02083415, OPTADDRESS = {}, AUTHOR = {Qiao Zheng}, MONTH = {March}, OPTNOTE = {}, NUMBER = {2019AZUR4013}, SCHOOL = {COMUE Université Côte d'Azur (2015 - 2019)}, TITLE = {Deep learning for robust segmentation and explainable analysis of 3d and dynamic cardiac images}, TYPE = {Theses}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cine MRI, Cardiac analysis, Cardiac segmentation, Deep learning, Apprentissage profond, Segmentation cardiaque, Analyse cardiaque, Ciné-IRM}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-02083415v2/file/2019AZUR4013.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-02083415}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{moceri:tel-01781331, OPTADDRESS = {}, AUTHOR = {Pamela Moceri}, MONTH = {January}, OPTNOTE = {}, NUMBER = {2018AZUR4003}, SCHOOL = {Université Côte d'Azur}, TITLE = {From normal right ventricle to pathology : shape and function analysis with different loading conditions using imaging and modelling}, TYPE = {Theses}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Medical imaging, Echocardiography, Strain imaging, Right ventricle, Modélisation, Échocardiographie, Imagerie médicale, Fonction ventriculaire droite}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-01781331/file/2018AZUR4003.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-01781331}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{demarcy:tel-01609910, OPTADDRESS = {}, AUTHOR = {Thomas Demarcy}, MONTH = {July}, OPTNOTE = {}, NUMBER = {2017AZUR4052}, SCHOOL = {Université Côte d'Azur}, TITLE = {Segmentation and study of anatomical variability of the cochlea from medical images}, TYPE = {Theses}, YEAR = {2017}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Shape model, Shape variability, Segmentation, Cochlea, Cochlée, Segmentation, Modèle de forme, Variabilité anatomique}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-01609910/file/2017AZUR4052.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-01609910}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{devilliers:tel-01683607, OPTADDRESS = {}, AUTHOR = {Loïc Devilliers}, MONTH = {November}, OPTNOTE = {}, NUMBER = {2017AZUR4103}, SCHOOL = {Université Côte d'Azur}, TITLE = {Consistency of statistics in infinite dimensional quotient spaces}, TYPE = {Theses}, YEAR = {2017}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Quotient space, Template estimation, Frechet mean, Espace quotient, Estimation de template, Moyenne de Fréchet}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/tel-01683607v2/file/2017AZUR4103.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/tel-01683607}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{giffardroisin:tel-01771476, OPTADDRESS = {}, AUTHOR = {Sophie Giffard-Roisin}, MONTH = {December}, OPTNOTE = {}, SCHOOL = {Université côte d'azur}, TITLE = {Non-invasive Personalisation of Cardiac Electrophysiological Models from Surface Electrograms}, TYPE = {Theses}, YEAR = {2017}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {ECG Imaging, Personalisation, Cardiac Electrophysiology Model, Machine learning, Simulated database, Inverse problem, Imagerie ECG, Personnalisation, Modèle electrophysiologique cardique, Apprentissage machine, Base de données simulée, Problème inverse}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/tel-01771476v2/file/Thesis_english.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/tel-01771476}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{mollero:tel-01737200, OPTADDRESS = {}, AUTHOR = {Roch Molléro}, MONTH = {December}, OPTNOTE = {}, NUMBER = {2017AZUR4106}, SCHOOL = {COMUE Université Côte d'Azur (2015 - 2019)}, TITLE = {Robust personalisation of 3D electromechanical cardiac models. Application to heterogeneous and longitudinal clinical databases}, TYPE = {Theses}, YEAR = {2017}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiax modelling, Parameter estimation, Multifidelity methods, Prior probabilities, Modélisation cardiaque, Estimation de paramètres, Méthodes multi-échelles, Probabilités a priori}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-01737200/file/2017AZUR4106.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-01737200}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{rohe:tel-01575292, OPTADDRESS = {}, AUTHOR = {Marc-Michel Rohé}, MONTH = {July}, OPTNOTE = {}, NUMBER = {2017AZUR4051}, SCHOOL = {Université Côte d'Azur}, TITLE = {Reduced representation of segmentation and tracking in cardiac images for group-wise longitudinal analysis}, TYPE = {Theses}, YEAR = {2017}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Medical image analysis, Non-rigid registration, Deep learning, Statistical model reduction, Longitudinal analysis, Analyse d'images médicales, Analyse longitudinale, Réduction statistique de modèle, Apprentissage profond, Recalage non-rigide}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/tel-01575292v2/file/2017AZUR4051.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/tel-01575292}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{hadjhamou:tel-01416569, OPTADDRESS = {}, AUTHOR = {Mehdi Hadj-Hamou}, MONTH = {December}, OPTNOTE = {}, NUMBER = {2016AZUR4141}, SCHOOL = {Université Côte d'Azur}, TITLE = {Beyond volumetry in longitudinal deformation-based morphometry : application to sexual dimorphism during adolescence}, TYPE = {Theses}, YEAR = {2016}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Longitudinal images, Evaluation, Volumetric methods, Processing pipeline, Non-rigid registration, Sexual dimorphism, Group comparison, Multivariate statistics, Images longitudinales, Évaluation, Statistiques multivariées, Comparaison de groupe, Dimorphisme sexuel, Chaîne de traitement, Recalage non-linéaire, Méthodes pour la volumétrie}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-01416569v2/file/2016AZUR4141.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-01416569}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{khanal:tel-01384678, OPTADDRESS = {}, AUTHOR = {Bishesh Khanal}, MONTH = {July}, OPTNOTE = {}, NUMBER = {2016NICE4046}, SCHOOL = {Université Nice Sophia Antipolis}, TITLE = {Modeling and simulation of realistic longitudinal structural brain MRIs with atrophy in Alzheimer's disease}, TYPE = {Theses}, YEAR = {2016}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Neurodegeneration, Alzheimer's disease, Biophysical modelling, Simulation of atrophy, Longitudinal MRIs simulation, Biomechanical simulation, Synthetic longitudinal images, Neurodégénérescence, Maladie d'Alzheimer, Modélisation biophysique, Simulation de l'atrophie, Simulation d'IRM longitudinale, Simulation biomécanique, Images longitudinales synthétiques}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-01384678/file/2016NICE4046.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-01384678}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{le:tel-01376688, OPTADDRESS = {}, AUTHOR = {Matthieu Lê}, MONTH = {June}, OPTNOTE = {}, NUMBER = {2016NICE4034}, SCHOOL = {Université Nice Sophia Antipolis}, TITLE = {Brain tumor growth modeling : application to radiotherapy}, TYPE = {Theses}, YEAR = {2016}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Medical imaging, Biophysical model, Personalization, Radiotherapy, Segmentation, Uncertainty, Imagerie médicale, Modèle biophysique, Personnalisation, Radiothérapie, Segmentation, Incertitude}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-01376688v2/file/Thesis_Matthieu_Le.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-01376688}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{miolane:tel-01411886, OPTADDRESS = {}, AUTHOR = {Nina Miolane}, MONTH = {December}, OPTNOTE = {}, NUMBER = {2016AZUR4146}, SCHOOL = {Université Côte d'Azur}, TITLE = {Geometric statistics for computational anatomy}, TYPE = {Theses}, YEAR = {2016}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Anatomy, Statistics, Geometry, Medical imaging, Imagerie médicale, Anatomie, Géométrie, Statistiques}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-01411886v2/file/2016AZUR4146.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-01411886}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{sermesant:tel-01337145, OPTADDRESS = {}, AUTHOR = {Maxime Sermesant}, MONTH = {June}, OPTNOTE = {}, SCHOOL = {Université de Nice - Sophia Antipolis}, TITLE = {When Cardiac Biophysics Meets Groupwise Statistics: Complementary Modelling Approaches for Patient-Specific Medicine}, TYPE = {Habilitation à diriger des recherches}, YEAR = {2016}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {cardiac modelling, biophysics, statistics, machine learning, modélisation cardiaque}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/tel-01337145/file/HDR.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/tel-01337145}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{vemuri:tel-01310047, OPTADDRESS = {}, AUTHOR = {Anant Suraj Vemuri}, MONTH = {April}, OPTNOTE = {}, NUMBER = {2016NICE4018}, SCHOOL = {Université Nice Sophia Antipolis}, TITLE = {Inter-operative biopsy site relocalization in gastroscopy : application to oesophagus}, TYPE = {Theses}, YEAR = {2016}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Gastro-intestinal endoscopy, Inter-operative relocalization, Electromagnetic tracking, Endoscopie gastro-intestinale, Relocalisation préopératoire, Suivi électromagnétique}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-01310047v3/file/2016NICE4018.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-01310047}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{audigier:tel-01256010, OPTADDRESS = {}, AUTHOR = {Chloé Audigier}, MONTH = {October}, OPTNOTE = {}, NUMBER = {2015NICE4071}, SCHOOL = {Université Nice Sophia Antipolis}, TITLE = {Computational modeling of radiofrequency ablation for the planning and guidance of abdominal tumor treatment}, TYPE = {Theses}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {RFA Modeling, Liver, Patient-Specific, Heat transfer, Cellular necrosis, Computational fluid dynamics, Computer model, Lattice Boltzmann method, Parameter estimation, Pre-clinical study, Medical imaging, Modélisation d'ARF, Foie, Personnalisation, Diffusion de la chaleur, Nécrose cellulaire, Mécanique des fluides, Modèle informatique, Méthode de Lattice Boltzmann, Estimation de paramètres, Étude préclinique, Imagerie médicale}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-01256010/file/2015NICE4071.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-01256010}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{benseghir:tel-01235141, OPTADDRESS = {}, AUTHOR = {Thomas Benseghir}, MONTH = {July}, OPTNOTE = {}, SCHOOL = {Université de Nice-Sophia Antipolis}, TITLE = {Topology Preserving Vascular Registration: Application to Percutaneous Coronary Intervention}, TYPE = {Theses}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {3D/2D Registration, Coronary Arteries, Recalage 3D/2D, Artères Coronaires}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/tel-01235141/file/ThesisManuscript_ThomasBenseghir.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/tel-01235141}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{cabreralozoya:tel-01206478, OPTADDRESS = {}, AUTHOR = {Cabrera Lozoya, Rocìo}, MONTH = {September}, OPTNOTE = {}, NUMBER = {2015NICE4059}, SCHOOL = {Université Nice Sophia Antipolis}, TITLE = {Radiofrequency ablation planning for cardiac arrhythmia treatment using modeling and machine learning approaches}, TYPE = {Theses}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac electrophysiology modeling, Intracardiac electrogram modeling, Machine learning, Radiofrequency ablation planning, Electroanatomical mapping, Local abnormal ventricular activities (LAVA), Modélisation de l'électrophysiologie cardiaque, Modélisation d'électrogrammes intracardiaques, Apprentissage automatique, Planification d'ablation par radiofréquence, Activités ventriculaires anormales locales LAVA}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-01206478v2/file/2015NICE4059.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-01206478}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{cordier:tel-01237853, OPTADDRESS = {}, AUTHOR = {Nicolas Cordier}, MONTH = {December}, OPTNOTE = {}, NUMBER = {2015NICE4111}, SCHOOL = {Université Nice Sophia Antipolis}, TITLE = {Multi-atlas patch-based segmentation and synthesis of brain tumor MR images}, TYPE = {Theses}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Patch-based, Multi-atlas, Glioma, Segmentation, Probabilistic generative model, Medical image simulation, Modality synthesis, Appariement de blocs de voxels, Multi-atlas, Gliome, Segmentation, Modèle génératif probabiliste, Simulation d'image médicale, Synthèse de modalité}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-01237853v2/file/2015NICE4111.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-01237853}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{gupta:tel-01159964, OPTADDRESS = {}, AUTHOR = {Vikash Gupta}, MONTH = {March}, OPTNOTE = {}, NUMBER = {2015NICE4007}, SCHOOL = {Université Nice Sophia Antipolis}, TITLE = {Diffusion tensor imaging of the brain : towards quantitative clinical tools}, TYPE = {Theses}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Clinical DTI, Multimodal brain atlas, Population based statistical analysis, HIV, DTI clinique, Super-résolution, Multimodales atlas du cerveau, Analyse statistique basée sur la population, VIH}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-01159964/file/2015NICE4007.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-01159964}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{lefolgoc:tel-01316449, OPTADDRESS = {}, AUTHOR = {Le Folgoc, Loïc}, MONTH = {November}, OPTNOTE = {}, NUMBER = {2015NICE4098}, SCHOOL = {Université Nice Sophia Antipolis}, TITLE = {Statistical learning for image-based personalization of cardiac models}, TYPE = {Theses}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Inverse problem, Cardiac motion tracking, Non-rigid registration, Structured sparse bayesian learning, Automatic relevance determination, Suivi de mouvement cardiaque, Problème inverse, Modélisation bayésienne parcimonieuse structurée, Recalage non-rigide, Détermination automatique, MCMC}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-01316449/file/2015NICE4098.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-01316449}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{margeta:tel-01243340, OPTADDRESS = {}, AUTHOR = {Jan Margeta}, MONTH = {December}, OPTNOTE = {}, NUMBER = {2015ENMP0055}, SCHOOL = {Ecole Nationale Supérieure des Mines de Paris}, TITLE = {Machine Learning for Simplifying the Use of Cardiac Image Databases}, TYPE = {Theses}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://pastel.archives-ouvertes.fr/tel-01243340v2/document}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://pastel.archives-ouvertes.fr/tel-01243340}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{stretton:tel-01144425, OPTADDRESS = {}, AUTHOR = {Erin Stretton}, MONTH = {November}, OPTNOTE = {}, NUMBER = {2014ENMP0064}, SCHOOL = {Ecole Nationale Supérieure des Mines de Paris}, TITLE = {Simulation of patient-specific glioma models for therapy planning}, TYPE = {Theses}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Brain Tumor Modeling, Glioma Modeling, Computer Model, Medical Imaging, Patient-Specific, Ficher Kolmogorov Model, Modélisation de Tumeur Cérébrale, Patient-Spécifique, Imagerie Médicale, Modèle de Fisher Kolmogorov, Modèlisation numérique, Modélisation de Gliome}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://pastel.hal.science/tel-01144425/file/2014ENMP0064.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://pastel.hal.science/tel-01144425}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{talbot:tel-01097201, OPTADDRESS = {}, AUTHOR = {Hugo Talbot}, MONTH = {July}, OPTNOTE = {}, SCHOOL = {Université des Sciences et Technologies de Lille}, TITLE = {Interactive Patient-Specific Simulation of Cardiac Electrophysiology}, TYPE = {Theses}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac Electrophysiology Modeling, Real-Time Simulation, Arrhythmia Modeling, Cardiac Electromechanics, Nonlinear Optimisation, Model Personalization, Endovascular Navigation, Training Simulation, Radio- Frequency Ablation Planning, SOFA Framework, Modélisation de l'Électrophysiologie Cardiaque, Simulation Temps-Réel, Modélisation d'Arythmie, Électromécanique Cardiaque, Optimisation Non-linéaire, Personnalisation de Modèle, Navigation Endovasculaire, Simulation d'Entrainement, Ablation Radio-Fréquence, Planning d'Ablation, Framework de Simulation SOFA}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/tel-01097201/file/Thesis.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/tel-01097201}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{breuilly:tel-00908962, OPTADDRESS = {}, AUTHOR = {Marine Breuilly}, MONTH = {November}, OPTNOTE = {}, NUMBER = {2013NICE4100}, SCHOOL = {Université Nice Sophia Antipolis}, TITLE = {Small animal 4D SPECT imaging : assessment of respiratory motion and iodide biodistribution}, TYPE = {Theses}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Compartmental analysis, Small animal, Dynamic images, Respiratory motion, Respiratory gating, 99mTc-pertechnetate biodistribution, SPECT, Analyse compartimentale, Biodistribution du 99mTc-pertechnétate, Synchronisation respiratoire, Mouvement respiratoire, Images dynamiques, Petit animal, TEMP}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-00908962v3/file/2013NICE4100.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-00908962}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{geremia:tel-00838795, OPTADDRESS = {}, AUTHOR = {Ezequiel Geremia}, MONTH = {January}, OPTNOTE = {}, NUMBER = {2013NICE4007}, SCHOOL = {Université Nice Sophia Antipolis}, TITLE = {Spatial random forests for brain lesions segmentation in MRIs and model-based tumor cell extrapolation}, TYPE = {Theses}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {MRI, Segmentation, Regression, Random forests, Multiple sclerosis, Gliomas, Cell density, IRM, Forêts aléatoires, Sclérose en plaques, Gliomes, Densité cellulaire}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-00838795/file/2013NICE4007.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-00838795}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{marchesseau:pastel-00820082, OPTADDRESS = {}, AUTHOR = {Stephanie Marchesseau}, MONTH = {January}, OPTNOTE = {}, NUMBER = {2012ENMP0082}, SCHOOL = {Ecole Nationale Supérieure des Mines de Paris}, TITLE = {Simulation de modèles personnalisés du coeur pour la prédiction de thérapies cardiaques}, TYPE = {Theses}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac modeling, Cardiac mechanics, Computer model, Medical imaging, Patient-specific, Specificity analysis, Modélisation Cardiaque, Mécanique Cardiaque, Modèle Informatique, Imagerie Médicale, Personnalisation, Etude de Spécificité}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://pastel.hal.science/pastel-00820082/file/2012ENMP0082.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://pastel.hal.science/pastel-00820082}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{mcleod:tel-00942556, OPTADDRESS = {}, AUTHOR = {Kristin Mcleod}, MONTH = {November}, OPTNOTE = {}, NUMBER = {2013NICE4091}, SCHOOL = {Université Nice Sophia Antipolis}, TITLE = {Reduced-order statistical models of cardiac growth, motion and blood flow : application to the tetralogy of Fallot heart}, TYPE = {Theses}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Tetralogy of Fallot, Statistical model reduction, Non-rigid registration, Medical image analysis, Analyse d'images médicales, Recalage, Modèles statistiques réduits, Tétralogie de Fallot}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-00942556/file/2013NICE4091.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-00942556}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{prakosa:tel-00837857, OPTADDRESS = {}, AUTHOR = {Adityo Prakosa}, MONTH = {January}, OPTNOTE = {}, NUMBER = {2013NICE4003}, SCHOOL = {Université Nice Sophia Antipolis}, TITLE = {Analysis and simulation of multimodal cardiac images to study the heart function}, TYPE = {Theses}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac motion tracking, Synthetic cardiac sequences, Cardiac inverse electro-kinematic learning, Suivi de mouvement cardiaque, Simulation de séquences synthétiques d'images cardiaque, Problème inverse du couplage électro-cinématique}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://theses.hal.science/tel-00837857/file/2013NICE4003.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://theses.hal.science/tel-00837857}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Lorenzi:PhD:12, OPTADDRESS = {}, AUTHOR = {Marco Lorenzi}, MONTH = {December}, OPTNOTE = {}, SCHOOL = {University of Nice Sophia Antipolis}, TITLE = {Deformation-based morphometry of the brain for the development of surrogate markers in Alzheimer's disease}, TYPE = {Ph.D. Thesis}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Marco.Lorenzi/PhDThesis.pdf}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://tel.archives-ouvertes.fr/tel-00844577}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Relan:PhD:12, OPTADDRESS = {}, AUTHOR = {Jatin Relan}, MONTH = {June}, OPTNOTE = {}, SCHOOL = {Ecole Nationale Supérieure des Mines de Paris}, TITLE = {Personalised Electrophysiological Models of Ventricular Tachycardia for Radio Frequency Ablation Therapy Planning}, TYPE = {Ph.D. Thesis}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jatin.Relan/JatinRELAN-Thesis-Manuscript_compressed_final.pdf}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://pastel.archives-ouvertes.fr/pastel-00794165}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Seiler:PhD:12, OPTADDRESS = {}, AUTHOR = {Christof Seiler}, MONTH = {September}, OPTNOTE = {}, SCHOOL = {University of Nice Sophia Antipolis and University of Bern}, TITLE = {Trees on Geometrical Deformations to Model the Statistical Variability of Organs in Medical Images}, TYPE = {Ph.D. Thesis}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Christof.Seiler/Seiler_PhDThesis.pdf}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://tel.archives-ouvertes.fr/tel-00844610}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Toussaint:PhD:12, OPTADDRESS = {}, AUTHOR = {Nicolas Toussaint}, MONTH = {July}, OPTNOTE = {}, SCHOOL = {King's College London}, TITLE = {Curvilinear Analysis and Approximation of Cardiac DTI In-Vivo}, TYPE = {PhD Thesis}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/PhDThesis-NicolasToussaint.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://tel.archives-ouvertes.fr/tel-00846248}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Andre:PhD:11, OPTADDRESS = {}, AUTHOR = {Barbara André}, MONTH = {October}, OPTNOTE = {}, SCHOOL = {Ecole Nationale Supérieure des Mines de Paris}, TITLE = {Smart Atlas for Endomicroscopy Diagnosis Support: A Clinical Application of Content-Based Image Retrieval}, TYPE = {Ph.D. Thesis}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Barbara.Andre/PhD-Thesis-Barbara-ANDRE.pdf}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Chung:PhD:11, OPTADDRESS = {}, AUTHOR = {François Chung}, MONTH = {January}, OPTNOTE = {}, SCHOOL = {Ecole Nationale Supérieure des Mines de Paris}, TITLE = {Regional appearance modeling for deformable model-based image segmentation}, TYPE = {Ph.D. Thesis}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Francois.Chung/Phd-Thesis_Francois-Chung.pdf}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://pastel.archives-ouvertes.fr/pastel-00575796/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Ramus:PhD:11, OPTADDRESS = {}, AUTHOR = {Liliane Ramus}, MONTH = {Juillet}, OPTNOTE = {}, SCHOOL = {Université de Nice Sophia Antipolis}, TITLE = {Conception et utilisation d'atlas anatomiques pour la segmentation automatique : application à la radiothérapie des cancers ORL}, TYPE = {Thèse de sciences}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Liliane.Ramus/These_Liliane_Ramus.pdf}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {no}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Billet:PhD:10, OPTADDRESS = {}, AUTHOR = {Florence Billet}, MONTH = {July}, OPTNOTE = {}, SCHOOL = {Université Nice Sophia-Antipolis}, TITLE = {Assimilation de données images pour la personnalisation d'un modèle électromécanique du coeur}, TYPE = {Thèse de sciences (PhD Thesis)}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/billetThese.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Durrleman:PhD:10, OPTADDRESS = {}, AUTHOR = {Stanley Durrleman}, MONTH = {March}, OPTNOTE = {}, SCHOOL = {Université de Nice-Sophia Antipolis}, TITLE = {Statistical models of currents for measuring the variability of anatomical curves, surfaces and their evolution}, TYPE = {Thèse de sciences (PhD Thesis)}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Stanley.Durrleman/Durrleman_thesis.pdf}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://tel.archives-ouvertes.fr/tel-00631382}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{fernandez:phd:2010, OPTADDRESS = {}, AUTHOR = {Romain Fernandez}, MONTH = {November}, OPTNOTE = {}, SCHOOL = {Université Montpellier 2}, TITLE = {Reconstruction tridimensionnelle et suivi de lignées cellulaires à partir d'images de microscopie laser : application à des tissus végétaux}, TYPE = {Thèse de sciences}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/fernandez-phd-2010.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Hufnagel:PhD:2010, OPTADDRESS = {}, AUTHOR = {Heike Hufnagel}, MONTH = {July}, OPTNOTE = {}, SCHOOL = {University of Lübeck}, TITLE = {A probabilistic framework for point-based shape modeling in medical image analysis}, TYPE = {PhD Thesis}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Heike.Hufnagel/Hufnagel_PhD.pdf}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://tel.archives-ouvertes.fr/tel-00844717}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Mansi:PhD:10, OPTADDRESS = {}, AUTHOR = {Tommaso Mansi}, MONTH = {September}, OPTNOTE = {}, SCHOOL = {Ecole Nationale Supérieure des Mines de Paris}, TITLE = {Image-Based Physiological and Statistical Models of the Heart, Application to Tetralogy of Fallot}, TYPE = {Thèse de sciences (PhD Thesis)}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tommaso.Mansi/mansi_thesis.pdf}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/tel-00530956/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Konukoglu:PhD:2009, OPTADDRESS = {}, AUTHOR = {Ender Konukoglu}, MONTH = {February}, OPTNOTE = {}, SCHOOL = {Université Nice Sophia-Antipolis}, TITLE = {Modeling Glioma Growth and Personalizing Growth Models in Medical Images}, TYPE = {PhD Thesis}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Ender.Konukoglu/konukoglu_thesis.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://tel.archives-ouvertes.fr/tel-00633697}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Peyrat:PhD:2009, OPTADDRESS = {}, AUTHOR = {Jean-Marc Peyrat}, MONTH = {November}, OPTNOTE = {}, SCHOOL = {Nice Sophia Antipolis University}, TITLE = {Comparison of Cardiac Anatomy and Function: Statistics on Fibre Architecture from DT-MRI and Registration of 4D CT Images}, TYPE = {PhD Thesis}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jean-Marc.Peyrat/Peyrat_2009_PhDThesis.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://tel.archives-ouvertes.fr/tel-00633206}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Souplet:PhD:09, OPTADDRESS = {}, AUTHOR = {Jean-Christophe Souplet}, MONTH = {January}, OPTNOTE = {}, SCHOOL = {Université de Nice -- Sophia-Antipolis}, TITLE = {Évaluation de l'atrophie et de la charge lésionnelle sur des séquences IRM de patients atteints de sclérose en plaques}, TYPE = {Thèse de sciences (PhD Thesis)}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jean-Christophe.Souplet/Souplet_PhDThesis.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Boisvert:PhD:2008, OPTADDRESS = {}, AUTHOR = {Jonathan Boisvert}, MONTH = {March}, OPTNOTE = {}, SCHOOL = {Université de Nice-Sophia Antipolis (France) and École Polytechnique de Montréal (Canada)}, TITLE = {Modèles de la variabilité géométrique du rachis scoliotique}, TYPE = {PhD thesis}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jonathan.Boisvert/PhD_Boisvert.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {CA}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Costa:PhD:08, OPTADDRESS = {}, AUTHOR = {Jimena Costa}, MONTH = {March}, OPTNOTE = {}, SCHOOL = {École Nationale Supérieure des Mines de Paris}, TITLE = {Segmentation of Anatomical Structures of the Lower Abdomen using 3D Deformable Models}, TYPE = {PhD Thesis}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Costa/These.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Fillard:PhD:08, OPTADDRESS = {}, AUTHOR = {Pierre Fillard}, MONTH = {February}, OPTNOTE = {}, SCHOOL = {University of Nice-Sophia Antipolis}, TITLE = {Riemannian Processing of Tensors for Diffusion MRI and Computational Anatomy of the Brain}, TYPE = {PhD Thesis}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Pierre.Fillard/ThesisPFillard.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Vercauteren:PhD:08, OPTADDRESS = {}, AUTHOR = {Tom Vercauteren}, MONTH = {January}, OPTNOTE = {}, SCHOOL = {École Nationale Supérieure des Mines de Paris}, TITLE = {Image Registration and Mosaicing for Dynamic In Vivo Fibered Confocal Microscopy}, TYPE = {PhD Thesis}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tom.Vercauteren/PhDThesis-TomVercauteren.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{charnoz:phd:2007, ADDRESS = {Strasbourg}, AUTHOR = {Arnaud Charnoz}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {Université Louis Pasteur}, TITLE = {Recalage d'organes intra-patient à partir de l'étude de leur réseau vasculaire : application au foie}, OPTTYPE = {}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Commowick:PhD:07, OPTADDRESS = {}, AUTHOR = {Olivier Commowick}, MONTH = {February}, OPTNOTE = {}, SCHOOL = {Université de Nice -- Sophia-Antipolis}, TITLE = {Création et Utilisation d'Atlas Anatomiques Numériques pour la Radiothérapie (Design and Use of Anatomical Atlases for Radiotherapy)}, TYPE = {Thèse de sciences (PhD Thesis)}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Olivier.Commowick/These.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Glatard:PhD:07, OPTADDRESS = {}, AUTHOR = {Tristan Glatard}, MONTH = {November}, OPTNOTE = {}, SCHOOL = {Université de Nice -- Sophia-Antipolis}, TITLE = {Description, deployment and optimization of medical image analysis workflows on production grids}, TYPE = {Thèse de sciences (PhD Thesis)}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://rainbow.polytech.unice.fr/publis/glatard:2007.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Arsigny:PhD:2006, OPTADDRESS = {}, AUTHOR = {Vincent Arsigny}, MONTH = {November}, OPTNOTE = {}, SCHOOL = {École polytechnique}, TITLE = {Processing Data in Lie Groups: An Algebraic Approach. Application to Non-Linear Registration and Diffusion Tensor MRI}, TYPE = {Thèse de sciences (PhD Thesis)}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {DT-MRI, Tensors, Riemannian geometry, Lie groups, interpolation, Log-Euclidean metrics, Polyaffine transformations, Diffeomorphisms, Non-rigid registration, Multi-affine registration, Magnetic Resonance Imaging, Bi-invariant means, Fréchet means, Statistics}, URL = {https://www-sop.inria.fr/asclepios/Publications/Arsigny/arsigny_phd.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://pastel.archives-ouvertes.fr/tel-00121162}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Clatz:these:2006, OPTADDRESS = {}, AUTHOR = {Olivier Clatz}, MONTH = {February}, OPTNOTE = {}, SCHOOL = {École des Mines de Paris}, TITLE = {Modèles biomécaniques et physio-pathologiques pour l'analyse d'images cérébrales}, TYPE = {Thèse de sciences}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Clatz/These_clatz.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/pastel-00003951/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Delingette:HDR:2006, OPTADDRESS = {}, AUTHOR = {Hervé Delingette}, MONTH = {March}, OPTNOTE = {}, SCHOOL = {Université Nice Sophia-Antipolis}, TITLE = {Modélisation de structures déformables}, TYPE = {Habilitation à diriger des recherches}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/hdr.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{dugas:these:2006, OPTADDRESS = {}, AUTHOR = {Guillaume Dugas-Phocion}, MONTH = {March}, OPTNOTE = {}, SCHOOL = {École des Mines de Paris}, TITLE = {Segmentation d'IRM Cérébrales Multi-Séquences et Application à la Sclérose en Plaques}, TYPE = {Thèse de sciences}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Misc/dugas-phd.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{malandain:hdr:2006, OPTADDRESS = {}, AUTHOR = {Grégoire Malandain}, MONTH = {March}, OPTNOTE = {}, SCHOOL = {Université Nice Sophia-Antipolis}, TITLE = {Les mesures de similarité pour le recalage des images médicales}, TYPE = {Habilitation à diriger des recherches}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/malandain-hdr-2006.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Pennec:HDR:2006, OPTADDRESS = {}, AUTHOR = {Xavier Pennec}, MONTH = {December}, OPTNOTE = {}, SCHOOL = {Université Nice Sophia-Antipolis}, TITLE = {Statistical Computing on Manifolds for Computational Anatomy}, TYPE = {Habilitation à diriger des recherches}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Tensors, regularization, PDE, geometry, Riemannian geometry, Registration, statistics, manifolds}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec_HDR.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://tel.archives-ouvertes.fr/tel-00633163}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{dauguet:thesis:2005, OPTADDRESS = {}, AUTHOR = {Julien Dauguet}, MONTH = {June}, OPTNOTE = {}, SCHOOL = {École Centrale de Paris}, TITLE = {L'imagerie post mortem tridimensionnelle cérébrale : constitution et apport pour l'analyse conjointe de données histologiques anatomo-fonctionnelles et la mise en correspondance avec l'imagerie in vivo}, OPTTYPE = {}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Dauguet/dauguet-phd-2005.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/tel-00339418/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{fouard:thesis:2005, OPTADDRESS = {}, AUTHOR = {Céline Fouard}, MONTH = {January}, OPTNOTE = {}, SCHOOL = {Université de Nice -- Sophia-Antipolis}, TITLE = {Extraction de paramètres morphométriques pour l'étude du réseau micro-vasculaire cérébral}, TYPE = {Thèse de sciences}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/dias/Theses/phd-124.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-1142.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/tel-00308884/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{moreau:thesis:2005, OPTADDRESS = {}, AUTHOR = {Valérie Moreau-Villéger}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {Université de Nice Sophia-Antipolis}, TITLE = {Méthodes variationnelles et séquentielles pour l'étude de la contraction cardiaque}, TYPE = {Thèse de sciences}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Moreau/moreauThese2005.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{reyes:phd:2005, OPTADDRESS = {}, AUTHOR = {Mauricio A. Reyes}, MONTH = {December}, OPTNOTE = {}, SCHOOL = {Université de Nice Sophia-Antipolis}, TITLE = {Respiratory Motion Compensation in Emission Tomography}, TYPE = {Thèse de sciences}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Stefanescu:PhD:05, OPTADDRESS = {}, AUTHOR = {Radu Stefanescu}, MONTH = {March}, OPTNOTE = {}, SCHOOL = {Université de Nice -- Sophia-Antipolis}, TITLE = {Parallel nonlinear registration of medical images with a priori information on anatomy and pathology}, TYPE = {Thèse de sciences}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Stefanescu/thesis_stefanescu.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{blondel:thesis:2004, OPTADDRESS = {}, AUTHOR = {Christophe Blondel}, MONTH = {mars}, OPTNOTE = {}, SCHOOL = {Université de Nice Sophia Antipolis}, TITLE = {Modélisation 3D et 3D+t des artères coronaires à partir de séquences rotationnelles de projections rayons X}, TYPE = {Thèse de sciences}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {ftp://ftp.inria.fr/INRIA/publication/Theses/TU-0820.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0820.html}, POSTSCRIPT = {ftp://ftp.inria.fr/INRIA/publication/Theses/TU-0820.ps.gz}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/tel-00006067/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{bondiau:thesis:2004, OPTADDRESS = {}, AUTHOR = {Pierre-Yves Bondiau}, MONTH = {November}, OPTNOTE = {}, SCHOOL = {Université de Nice-Sophia Antipolis}, TITLE = {Mise en oeuvre et évaluation d'outils de fusion d'image en radiothérapie}, TYPE = {Thèse de sciences}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{flandin:thesis:2004, OPTADDRESS = {}, AUTHOR = {Guillaume Flandin}, MONTH = {April}, OPTNOTE = {}, SCHOOL = {Université de Nice-Sophia Antipolis}, TITLE = {Utilisation d'informations géométriques pour l'analyse statistique des données d'IRM fonctionnelle}, OPTTYPE = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/PhD_Flandin.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Nicolau:PhD:2004, OPTADDRESS = {}, AUTHOR = {Stéphane Nicolau}, MONTH = {November}, OPTNOTE = {}, SCHOOL = {Université de Nice-Sophia Antipolis}, TITLE = {Un système de réalité augmentée pour guider les opérations du foie en radiologie interventionnelle}, OPTTYPE = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/dias/Theses/phd-312.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-1136.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/tel-00000006/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Forest:Thesis:03, OPTADDRESS = {}, AUTHOR = {Clément Forest}, MONTH = {March}, OPTNOTE = {}, SCHOOL = {École Polytechnique}, TITLE = {Simulation de chirurgie par coelioscopie : contributions à l'étude de la découpe volumique, au retour d'effort et à la modélisation des vaisseaux sanguins}, OPTTYPE = {}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Forest/These_forest.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0776.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{granger:these:2003, OPTADDRESS = {}, AUTHOR = {Sébastien Granger}, MONTH = {April}, OPTNOTE = {}, SCHOOL = {Ecole des Mines de Paris}, TITLE = {Une approche statistique multi-échelle au recalage rigide de surfaces : Application à l'implantologie dentaire}, TYPE = {Thèse de sciences}, YEAR = {2003}, ABSTRACT = {The main subject of this work is the rigid registration of surfaces dedicated to VirtualScope, a per-operative guiding system designed for oral implants surgery. It is based on a purely statistical approach. We first show how to compute and maximize a likelihood, based on a model of the data noise, for the landmarks registration problem. This approach justifies the use of the ICP algorithm, and a new multi-scale variant named ICP/EM, which improves accuracy, speed and robustness. We introduce new noise models specifically designed for the registration of sampled and noised surfaces. We discuss about the theoretical prediction of the registration accuracy, and use it for guiding the data acquisition. We analyze in detail the experimental performances of the algorithm, and provide methods for setting optimally the parameters and ensuring the correctness of registration results. The resulting algorithm is perfectly suited to the VirtualScope application. The second part of this work deals with the more general problem of the statistical modelisation of sampled and noised curves and surfaces. Based on previous works on Saliency and Tensor Voting notions, it defines a vote field that represent the probability of a curve or surface element, knowing another element. We provide basic yet easy to implement examples of such a field, which can handle the surface shape, the sampling strategy and the measurement errors. We apply them successfully to the registration problem, and suggest to use them to derive Bayesian methods to virtually all other computer vision problems involving sampled and noised curves and surfaces. This work could lead to the design of a common statistical and multi-scale framework for these various methods.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {surface, registration, statistics, multi-scale, validation, ICP, EM, odontology, oriented points, saliency, tensor-voting, computer-guided surgery}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Granger_These.pdf}, OPTURL-PUBLISHER = {}, PS = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Granger_These.ps.gz}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Pitiot:PhD:2003, OPTADDRESS = {}, AUTHOR = {Alain Pitiot}, MONTH = {November}, OPTNOTE = {}, SCHOOL = {École des mines de Paris}, TITLE = {Segmentation automatique des structures cérébrales s'appuyant sur des connaissances explicites}, TYPE = {Thèse de sciences}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Pitiot/pitiot-thesis-2003.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/pastel-00001346/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Sermesant:Thesis:03, OPTADDRESS = {}, AUTHOR = {M. Sermesant}, MONTH = {May}, OPTNOTE = {}, SCHOOL = {Université de Nice Sophia Antipolis}, TITLE = {Modèle électromécanique du coeur pour l'analyse d'image et la simulation (Electromechanical Model of the Heart for Image Analysis and Simulation)}, OPTTYPE = {}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/theseMaximeSermesant.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0808.html}, POSTSCRIPT = {ftp://ftp.inria.fr/INRIA/publication/Theses/TU-0808.ps.gz}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{stoeckel:these:2003, OPTADDRESS = {}, AUTHOR = {Jonathan Stoeckel}, MONTH = {March}, OPTNOTE = {}, SCHOOL = {Ecole des Mines de Paris}, TITLE = {Outils de classification pour l'aide au diagnostic : application à la maladie d'Alzheimer et à d'autres pathologies cérébrales}, TYPE = {Thèse de sciences}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0773.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Cachier:These:02, OPTADDRESS = {}, AUTHOR = {Pascal Cachier}, MONTH = {January}, OPTNOTE = {}, SCHOOL = {École Centrale des Arts et Manufactures}, TITLE = {Recalage non rigide d'images médicales volumiques - contribution aux approches iconiques et géométriques}, TYPE = {Thèse de sciences}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, similarity measures, deformations}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0705.html}, POSTSCRIPT = {ftp://ftp.inria.fr/INRIA/publication/Theses/TU-0705.ps.gz}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Linguraru:PhD:02, OPTADDRESS = {}, AUTHOR = {M.G. Linguraru}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {University of Oxford}, TITLE = {Feature Detection in Mammographic Image Analysis}, TYPE = {PhD Thesis}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Linguraru/Linguraru_PhD_2002.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Ourselin:These:02, OPTADDRESS = {}, AUTHOR = {Sébastien Ourselin}, MONTH = {January}, OPTNOTE = {}, SCHOOL = {Université de Nice Sophia-Antipolis}, TITLE = {Recalage d'images médicales par appariement de régions - Application à la construction d'atlas histologiques 3D}, TYPE = {Thèse de sciences}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, similarity measures, medical images, histology, autoradiography, robust estimation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Ourselin/These-ourselin.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0744.html}, POSTSCRIPT = {ftp://ftp.inria.fr/INRIA/publication/Theses/TU-0744.ps.gz}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Rey:These:02, OPTADDRESS = {}, AUTHOR = {David Rey}, MONTH = {October}, OPTNOTE = {}, SCHOOL = {Université de Nice Sophia-Antipolis}, TITLE = {Détection et quantification de processus évolutifs dans des images médicales tridimensionnelles : application à la sclérose en plaques}, TYPE = {Thèse de sciences}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {time analysis of images, magnetic resonance, multiple sclerosis, vector field, differential operators, statistical inference}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0748.html}, POSTSCRIPT = {ftp://ftp.inria.fr/INRIA/publication/Theses/TU-0748.ps.gz}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{migneco:thesis:2001, OPTADDRESS = {}, AUTHOR = {Octave Migneco}, MONTH = {December}, OPTNOTE = {}, SCHOOL = {Université de Nice Sophia-Antipolis}, TITLE = {Contribution à l'Analyse d'Images de la Perfusion Cérébrale : Recalage, Fusion et Traitement Statistique}, TYPE = {Thèse de sciences}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Picinbono:These:01, OPTADDRESS = {}, AUTHOR = {Guillaume Picinbono}, MONTH = {February}, OPTNOTE = {}, SCHOOL = {université de Nice Sophia-Antipolis}, TITLE = {Modèles géométriques et physiques pour la simulation d'interventions chirurgicales}, TYPE = {Thèse de sciences}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://hal.inria.fr/tel-00633965/document}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/tel-00633965/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Prima:These:01, OPTADDRESS = {}, AUTHOR = {Sylvain Prima}, MONTH = {mars}, OPTNOTE = {}, SCHOOL = {université Paris XI, Orsay}, TITLE = {Étude de la symétrie bilatérale en imagerie cérébrale volumique}, TYPE = {Thèse de sciences}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {statistics, medical images, symmetry}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-1051.html}, POSTSCRIPT = {ftp://ftp.inria.fr/INRIA/publication/Theses/TU-1051.ps.gz}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Roche:These:01, OPTADDRESS = {}, AUTHOR = {Alexis Roche}, MONTH = {February}, OPTNOTE = {}, SCHOOL = {Université de Nice Sophia-Antipolis}, TITLE = {Recalage d'images médicales par inférence statistique}, TYPE = {Thèse de sciences}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, similarity measures, medical images, statistics, optimization, correlation ratio, mutual information}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0665.html}, POSTSCRIPT = {ftp://ftp.inria.fr/INRIA/publication/Theses/TU-0665.ps.gz}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{phd-krissian, OPTADDRESS = {}, AUTHOR = {Karl Krissian}, MONTH = {janvier}, OPTNOTE = {}, SCHOOL = {université de Nice Sophia-Antipolis}, TITLE = {Traitement multi-échelle : Applications à l'imagerie médicale et à la détection tridimensionnelle de vaisseaux}, TYPE = {Thèse de sciences}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0616.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Gonzalez:PhD:99, OPTADDRESS = {}, AUTHOR = {González Ballester, M. A.}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {University of Oxford}, TITLE = {Morphometric Analysis of Brain Structures in MRI}, OPTTYPE = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gonzalez/Gonzalez_PhD_1999.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{montagnat:these:19991, OPTADDRESS = {}, AUTHOR = {Johan Montagnat}, MONTH = {December}, OPTNOTE = {}, SCHOOL = {Université de Nice-Sophia Antipolis}, TITLE = {Modéles déformables pour la segmentation et la modélisation d'images médicales 3D et 4D}, TYPE = {Thèse de sciences}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {thesis, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/These-Montagnat.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0612.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Soler:these:1998, OPTADDRESS = {}, AUTHOR = {L. Soler}, MONTH = {November}, OPTNOTE = {}, SCHOOL = {université de Paris XI, Orsay}, TITLE = {Une nouvelle méthode de segmentation des structures anatomiques et pathologiques : application aux angioscanners 3D du foie pour la planification chirurgicale}, TYPE = {Thèse de sciences}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0566.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{cotin_these, OPTADDRESS = {}, AUTHOR = {S. Cotin}, MONTH = {November}, OPTNOTE = {}, SCHOOL = {Université de Nice Sophia-Antipolis}, TITLE = {Modèles anatomiques déformables en temps réel : Application à la simulation de chirurgie avec retour d'effort}, TYPE = {Thèse de sciences}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {thesis, simulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/These.Cotin.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0595.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Declerck:these:1997, OPTADDRESS = {}, AUTHOR = {J. Declerck}, MONTH = {November}, OPTNOTE = {}, SCHOOL = {université Nice-Sophia Antipolis}, TITLE = {Étude de la dynamique cardiaque par analyse d'images tridimensionnelles}, TYPE = {Thèse de sciences}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/DECLERCK_THESE.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0495.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Fidrich:these:1997, OPTADDRESS = {}, AUTHOR = {Márta Fidrich}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {université Paris XI, Orsay}, TITLE = {Analyse multiéchelle des invariants, Application à l'imagerie médicale volumique}, TYPE = {Thèse de sciences}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0497.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{thirion-habilitation, ADDRESS = {France}, AUTHOR = {J.-P. Thirion}, MONTH = {June}, OPTNOTE = {}, SCHOOL = {université de Nice, Sophia-Antipolis}, TITLE = {Mise en Correspondance Automatique d'Images Médicales Tri-Dimensionnelles}, TYPE = {Thèse d'Habilitation à Diriger des Recherches}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, deformations}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{bondiau:these:medecine:1996, OPTADDRESS = {}, AUTHOR = {Pierre-Yves Bondiau}, MONTH = {octobre}, OPTNOTE = {}, SCHOOL = {université de Nice Sophia-Antipolis}, TITLE = {L'oeil virtuel}, TYPE = {thèse de médecine}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{vidal:these:1996, OPTADDRESS = {}, AUTHOR = {S. Fernández-Vidal}, MONTH = {septembre}, OPTNOTE = {}, SCHOOL = {université de Nice Sophia-Antipolis}, TITLE = {Squelettes et outils de topologie discrète : application à l'imagerie médicale 3D}, TYPE = {Thèse de sciences}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0486.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Pennec:Phd:96, ADDRESS = {Palaiseau (France)}, AUTHOR = {Xavier Pennec}, MONTH = {December}, OPTNOTE = {}, SCHOOL = {Ecole Polytechnique}, TITLE = {L'incertitude dans les problèmes de reconnaissance et de recalage -- Applications en imagerie médicale et biologie moléculaire}, TYPE = {Thèse de sciences (PhD thesis)}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, statistics, validation, geometry, Riemannian geometry, medical images, protein structure}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec_PhD.pdf}, URL-PUBLISHER = {http://www.inria.fr/sophia/personnel/Xavier.Pennec/These.html}, POSTSCRIPT = {ftp://ftp.inria.fr/INRIA/publication/Theses/TU-0456}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{bardinet:these:1995, OPTADDRESS = {}, AUTHOR = {E. Bardinet}, MONTH = {December}, OPTNOTE = {}, SCHOOL = {université Paris IX Dauphine}, TITLE = {Modèles déformables contraints - applications à l'imagerie cardiaque}, TYPE = {Thèse de sciences}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0444.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{cohen_these, OPTADDRESS = {}, AUTHOR = {L. D. Cohen}, MONTH = {June}, OPTNOTE = {}, SCHOOL = {Ceremade-Université Paris IX Dauphine}, TITLE = {Méthodes Variationnelles en traitement d'images}, TYPE = {Habilitation à diriger des recherches}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Feldmar:these:1995, OPTADDRESS = {}, AUTHOR = {J. Feldmar}, MONTH = {December}, OPTNOTE = {}, SCHOOL = {École Polytechnique}, TITLE = {Recalage rigide, non-rigide et projectif d'images médicales tridimensionnelles}, TYPE = {Thèse de sciences}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, deformations}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0461.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{gourdon_these, OPTADDRESS = {}, AUTHOR = {A. Gourdon}, MONTH = {January}, OPTNOTE = {}, SCHOOL = {Université Paris XI-Orsay}, TITLE = {Applications de la Géométrie Différentielle à l'Imagerie Médicale Multidimensionelle}, TYPE = {Thèse de sciences}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{subsol:these:1995, OPTADDRESS = {}, AUTHOR = {Gérard Subsol}, MONTH = {December}, OPTNOTE = {}, SCHOOL = {École Centrale de Paris}, TITLE = {Construction automatique d'atlas anatomiques à partir d'images médicales tridimensionnelles : applications à un atlas du crâne et du cerveau}, TYPE = {Thèse de sciences}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0379.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{benayoun_these, OPTADDRESS = {}, AUTHOR = {S. Benayoun}, MONTH = {December}, OPTNOTE = {}, SCHOOL = {Université Paris IX Dauphine}, TITLE = {Calcul local du mouvement, applications à l'imagerie médicale multidimensionnelle}, TYPE = {Thèse de sciences}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{delingette_these, OPTADDRESS = {}, AUTHOR = {H. Delingette}, MONTH = {July}, OPTNOTE = {}, SCHOOL = {Ecole Centrale de Paris}, TITLE = {Modélisation, Déformation et Reconnaissance d'objets tridimensionnels a l'aide de maillages simplexes}, TYPE = {Thèse de sciences}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {thesis, reconstruction, recognition}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/These-Delingette.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{NastarPhD, OPTADDRESS = {}, AUTHOR = {Chahab Nastar}, MONTH = {Juillet}, OPTNOTE = {}, SCHOOL = {Ecole Nationale des Ponts et Chaussées}, TITLE = {Modèles physiques déformables et modes vibratoires pour l'analyse du mouvement non-rigide dans les images multidimensionnelles}, TYPE = {Thèse de sciences}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {motion tracking, deformations}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{GueziecAndre:These93, OPTADDRESS = {}, AUTHOR = {André Guéziec}, MONTH = {Février}, OPTNOTE = {}, SCHOOL = {Université de Paris XI ORSAY}, TITLE = {Reconnaissance Automatique de Surfaces et Courbes Gauches. Application à l'Analyse d'Images Volumiques}, TYPE = {Thèse de sciences}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0224.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{monga93, OPTADDRESS = {}, AUTHOR = {O. Monga}, MONTH = {Janvier}, OPTNOTE = {}, SCHOOL = {Université de Paris XI (Orsay)}, TITLE = {Des images à la géométrie des objets}, TYPE = {Mémoire d'habilitation à diriger des Recherches}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{Isaac:PhD, OPTADDRESS = {}, AUTHOR = {I. Cohen}, MONTH = {Juin}, OPTNOTE = {}, SCHOOL = {Université Paris-IX Dauphine}, TITLE = {Modèles déformables 2-D et 3-D: Application à la segmentation dimages médicales}, TYPE = {Thèse de sciences}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0182.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PHDTHESIS{malandain92b, OPTADDRESS = {}, AUTHOR = {G. Malandain}, MONTH = {Septembre}, OPTNOTE = {}, SCHOOL = {Ecole Centrale de Paris}, TITLE = {Filtrage, topologie et mise en correspondance d'images médicales multidimensionnelles}, TYPE = {Thèse de sciences}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/tu-0199.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{taiello:hal-04501037, AUTHOR = {Riccardo Taiello and Melek Önen and Francesco Capano and Olivier Humbert and Marco Lorenzi}, JOURNAL = {Medical Image Analysis}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Elsevier}, TITLE = {Privacy preserving image registration}, VOLUME = {94}, YEAR = {2024}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2024.103129}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-04501037}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{berenbaum:hal-04081046, AUTHOR = {Arnaud Berenbaum and Hervé Delingette and Aurélien Maire and Cécile Poret and Claire Hassen-Khodja and Stéphane Bréant and Christel Daniel and Patricia Martel and Lamiae Grimaldi and Marie Frank and Emmanuel Durand and Florent Besson}, JOURNAL = {Applied Sciences}, MONTH = {May}, OPTNOTE = {}, NUMBER = {9}, PAGES = {5281}, PUBLISHER = {Multidisciplinary digital publishing institute (MDPI)}, TITLE = {Performance of AI-Based Automated Classifications of Whole-Body FDG PET in Clinical Practice: The CLARITI Project}, VOLUME = {13}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.3390/app13095281}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {FDG PET, artificial intelligence, deep learning, convolutional neural network}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04081046}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{brillatsavarin:hal-04162794, AUTHOR = {Nina Brillat-Savarin and Carine Wu and Laurène Aupin and Camille Thoumin and Dimitri Hamzaoui and Raphaële Renard-Penna}, JOURNAL = {European Journal of Radiology}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {110974}, PUBLISHER = {Elsevier}, TITLE = {3.0 T prostate MRI: Visual assessment of 2D and 3D T2-weighted imaging sequences using PI-QUAL score}, VOLUME = {166}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1016/j.ejrad.2023.110974}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-04162794}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{calissano:hal-03910761, AUTHOR = {Anna Calissano and Théodore Papadopoulo and Xavier Pennec and Samuel Deslauriers-Gauthier}, JOURNAL = {Human Brain Mapping}, MONTH = {December}, OPTNOTE = {}, NUMBER = {1}, PAGES = {e26554}, PUBLISHER = {Wiley}, TITLE = {Graph Alignment Exploiting the Spatial Organisation Improves the Similarity of Brain Networks}, VOLUME = {45}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1002/hbm.26554}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03910761v2/file/BrainMatching-2-1.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03910761}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{cedilnik:hal-04255556, AUTHOR = {Nicolas Cedilnik and Mihaela Pop and Josselin Duchateau and Frédéric Sacher and Pierre Jaïs and Hubert Cochet and Maxime Sermesant}, JOURNAL = {JACC: Clinical Electrophysiology}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Elsevier}, TITLE = {Efficient Patient-Specific Simulations of Ventricular Tachycardia Based on Computed Tomography-Defined Wall Thickness Heterogeneity}, OPTVOLUME = {}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1016/j.jacep.2023.08.008}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac modeling, Electrophysiology modeling, CT, Ventricular tachycardia, Medical simulation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-04255556/file/cedilnik-jaccep-2023.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04255556}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{chrisochoides:hal-04334718, AUTHOR = {Nikos Chrisochoides and Yixun Liu and Fotis Drakopoulos and Andriy Kot and Panos Foteinos and Christos Tsolakis and Emmanuel Billias and Olivier Clatz and Nicholas Ayache and Andrey Fedorov and Alex Golby and Peter Black and Ron Kikinis}, JOURNAL = {Frontiers in Digital Health}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Frontiers Media S.A.}, TITLE = {Comparison of physics-based deformable registration methods for image-guided neurosurgery}, VOLUME = {5}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.3389/fdgth.2023.1283726}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Image-guided neurosurgery, physics-based deformable registration, finite element methods (FEM), high performance computing, mesh generation}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04334718}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{clairon:hal-03335826, AUTHOR = {Quentin Clairon and Chloé Pasin and Irene Balelli and Rodolphe Thiébaut and Mélanie Prague}, JOURNAL = {Computational Statistics}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Springer Verlag}, TITLE = {Parameter estimation in nonlinear mixed effect models based on ordinary differential equations: An optimal control approach}, OPTVOLUME = {}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Dynamic population models, Ordinary differential equations, Optimal control theory, Mechanistic models, Nonlinear mixed effects models, Clinical trial analysis}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03335826v2/file/Manuscript_Estimation_NLMEODE_via_OCA_CompStat%20%281%29.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03335826}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{dadoun:hal-03773082, AUTHOR = {Hind Dadoun and Hervé Delingette and Anne-Laure Rousseau and de Kerviler, Eric and Nicholas Ayache}, JOURNAL = {Journal of Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {3}, PAGES = {034502}, PUBLISHER = {SPIE Digital Library}, TITLE = {Deep Clustering for Abdominal Organ Classification in US imaging}, VOLUME = {10}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1117/1.JMI.10.3.034502}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {ultrasound imaging, representation learning, deep clustering, semi-supervised learning}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03773082v3/file/soumission_jmi_dadoun_vf.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03773082}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{fraboni:hal-03720629, AUTHOR = {Yann Fraboni and Richard Vidal and Laetitia Kameni and Marco Lorenzi}, JOURNAL = {Journal of Machine Learning Research}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {1-43}, PUBLISHER = {Microtome Publishing}, TITLE = {A General Theory for Federated Optimization with Asynchronous and Heterogeneous Clients Updates}, VOLUME = {24}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03720629/file/A_General_Theory_for_Federated_Optimization_with_Delayed_Gradients_and_Heterogeneous_Data.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03720629}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{guigui:hal-03766900, AUTHOR = {Nicolas Guigui and Nina Miolane and Xavier Pennec}, JOURNAL = {Foundations and Trends in Machine Learning}, MONTH = {February}, OPTNOTE = {}, NUMBER = {3}, PAGES = {329-493}, PUBLISHER = {Now Publishers}, TITLE = {Introduction to Riemannian Geometry and Geometric Statistics: from basic theory to implementation with Geomstats}, VOLUME = {16}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1561/2200000098}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Riemannian Geometry, Geometric Statistics, Python Library}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03766900v2/file/main-now.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03766900}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{hamzaoui:hal-04208018, AUTHOR = {Dimitri Hamzaoui and Sarah Montagne and Raphaële Renard-Penna and Nicholas Ayache and Hervé Delingette}, JOURNAL = {Journal of Machine Learning for Biomedical Imaging}, MONTH = {September}, OPTNOTE = {}, NUMBER = {UNSURE 2022 Special Issue}, PAGES = {361-389}, PUBLISHER = {Melba editors}, TITLE = {Morphologically-Aware Consensus Computation via Heuristics-based IterATive Optimization (MACCHIatO)}, VOLUME = {2}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.59275/j.melba.2023-219c}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Consensus, Distance, Heuristic, Optimization, STAPLE}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-04208018/file/MOJITO_MELBA.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-04208018}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{harms:hal-02972385, AUTHOR = {Philipp Harms and Peter W. Michor and Xavier Pennec and Stefan Sommer}, JOURNAL = {Differential Geometry and its Applications}, MONTH = {October}, NOTE = {29 pages, 1 figure}, OPTNUMBER = {}, PAGES = {102029}, PUBLISHER = {Elsevier}, TITLE = {Geometry of Sample Spaces}, VOLUME = {90}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1016/j.difgeo.2023.102029}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02972385}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{hussain:hal-04388909, AUTHOR = {Raabid Hussain and Attila Frater and Roger Calixto and Chadlia Karoui and Jan Margeta and Zihao Wang and Michel Hoen and Hervé Delingette and François Patou and Charles Raffaelli and Clair Vandersteen and Nicolas Guevara}, JOURNAL = {Journal of Clinical Medicine}, MONTH = {January}, OPTNOTE = {}, NUMBER = {2}, PAGES = {509}, PUBLISHER = {MDPI}, TITLE = {Anatomical Variations of the Human Cochlea Using an Image Analysis Tool}, VOLUME = {12}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.3390/jcm12020509}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Otology, Cochlea Modeling, Medical Image Analysis, cochlear morphology, cochlear implantation, statistical analysis}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-04388909/file/jcm-12-00509-v2.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04388909}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{kashtanova:hal-04359753, AUTHOR = {Victoriya Kashtanova and Mihaela Pop and Ibrahim Ayed and Patrick Gallinari and Maxime Sermesant}, JOURNAL = {Interface Focus}, MONTH = {December}, OPTNOTE = {}, NUMBER = {6}, OPTPAGES = {}, PUBLISHER = {Royal Society publishing}, TITLE = {Simultaneous data assimilation and cardiac electrophysiology model correction using differentiable physics and deep learning}, VOLUME = {13}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1098/rsfs.2023.0043}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Physics-based learning, Deep Learning, Cardiac electrophysiology, Simulations}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-04359753/file/Article_RoyalSociety_final%20%282%29.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-04359753}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{lareyre:hal-04361618, AUTHOR = {Fabien Lareyre and Kak Khee Yeung and Lisa Guzzi and Di Lorenzo, Gilles and Arindam Chaudhuri and Christian-Alexander Behrendt and Konstantinos Spanos and Juliette Raffort}, JOURNAL = {Seminars in Vascular Surgery}, MONTH = {September}, OPTNOTE = {}, NUMBER = {3}, PAGES = {448-453}, PUBLISHER = {WB Saunders}, TITLE = {Artificial intelligence in vascular surgical decision making}, VOLUME = {36}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1053/j.semvascsurg.2023.05.004}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Artificial intelligence, Machine learning, Vascular disease, Decision making, Precision medicine, Artificial intelligence}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04361618}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{moliere:hal-04185065, AUTHOR = {Sébastien Molière and Dimitri Hamzaoui and Anna Luzurier and Benjamin Granger and Sarah Montagne and Alexandre Allera and Malek Ezziane and Raphaële Quint and Mehdi Kalai and Nicholas Ayache and Hervé Delingette and Raphaële Renard-Penna}, JOURNAL = {Diagnostic and Interventional Imaging}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Elsevier}, TITLE = {Reference standard for the evaluation of automatic segmentation algorithms: Quantification of inter observer variability of manual delineation of prostate contour on MRI}, OPTVOLUME = {}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1016/j.diii.2023.08.001}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = { Artificial intelligence Inter-reader variability Magnetic resonance imaging Prostate Segmentation}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-04185065}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{soulier:hal-04227434, AUTHOR = {Théodore Soulier and Olivier Colliot and Nicholas Ayache and Benjamin Rohaut}, JOURNAL = {Anaesthesia Critical Care & Pain Medicine}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {101301}, PUBLISHER = {Elsevier Masson}, TITLE = {How will tomorrow's algorithms fuse multimodal data? The example of the neuroprognosis in Intensive Care}, OPTVOLUME = {}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1016/j.accpm.2023.101301}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Disorders of Consciousness, Neurological Prognosis, Multimodal Data, Artificial Intelligence, Disorders of Consciousness Neurological Prognosis Multimodal Data Artificial Intelligence}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.sorbonne-universite.fr/hal-04227434/file/manuscript4hal.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.sorbonne-universite.fr/hal-04227434}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{thanwerdas:hal-03647321, AUTHOR = {Yann Thanwerdas and Xavier Pennec}, JOURNAL = {SIAM Journal on Matrix Analysis and Applications}, MONTH = {September}, OPTNOTE = {}, NUMBER = {3}, PAGES = {1447-1476}, PUBLISHER = {Society for Industrial and Applied Mathematics}, TITLE = {Bures-Wasserstein minimizing geodesics between covariance matrices of different ranks}, VOLUME = {44}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1137/22M149168X}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Covariance matrices, PSD matrices, Bures-Wasserstein, Orbit space, Geodesics, Injection domain, 15B48, 15A63, 53B20, 53C22, 58D17, 53-08, 53A04, 54E50, 58A35}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03647321/file/main.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03647321}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{thanwerdas:hal-03338601, AUTHOR = {Yann Thanwerdas and Xavier Pennec}, JOURNAL = {Linear Algebra and its Applications}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {163-201}, PUBLISHER = {Elsevier}, TITLE = {O(n)-invariant Riemannian metrics on SPD matrices}, VOLUME = {661}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1016/j.laa.2022.12.009}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {53B20, Symmetric Positive Definite matrices, Riemannian geometry, Invariance under orthogonal transformations, Families of metrics, Log-Euclidean metric, Affine-invariant metric, Bures-Wasserstein metric, Kernel metrics}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03338601v3/file/LAA_YT_XP_O_n_invariant_metrics_v3%20%282%29.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03338601}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{tourniaire:hal-03972289, AUTHOR = {Paul Tourniaire and Marius Ilie and Paul Hofman and Nicholas Ayache and Hervé Delingette}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {102763}, PUBLISHER = {Elsevier}, TITLE = {MS-CLAM: Mixed Supervision for the classification and localization of tumors in Whole Slide Images}, VOLUME = {85}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2023.102763}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Digital Pathology, Mixed Supervision, Deep Learning, Camelyon16, DigestPath2019}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03972289/file/article_MedIA_hal_version.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03972289}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{wang:hal-04042921, AUTHOR = {Zihao Wang and Zhifei Xu and Jiayi He and Herve Delingette and Jun Fan}, JOURNAL = {IEEE Transactions on Signal and Power Integrity}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {13-22}, TITLE = {Long Short-Term Memory Neural Equalizer}, VOLUME = {2}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1109/TSIPI.2023.3242855}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04042921}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{lorenzi:hal-04239814, OPTADDRESS = {}, AUTHOR = {Marco Lorenzi and Marie Deprez and Irene Balelli and Ana L Aguila and Andre Altmann}, BOOKTITLE = {Machine Learning for Brain Disorders}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Olivier Colliot}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {573 - 597}, PUBLISHER = {Springer}, SERIES = {Neuromethods}, TITLE = {Integration of Multimodal Data}, OPTTYPE = {}, VOLUME = {NM197}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1007/978-1-0716-3195-9_19}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Multivariate analysis, Latent variable models, Multimodal imaging, -Omics, Imaginggenetics, Partial least squares, Canonical correlation analysis, Variational autoencoders, Sparsity, Interpretability}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-04239814/file/Chapter19.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-04239814}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{ly:hal-04212068, OPTADDRESS = {}, AUTHOR = {Buntheng Ly and Mihaela Pop and Hubert Cochet and Nicolas Duchateau and Declan O'regan and Maxime Sermesant}, BOOKTITLE = {AI and Big Data in Cardiology : A Practical Guide}, OPTCHAPTER = {}, OPTEDITION = {}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {105-133}, PUBLISHER = {Springer International Publishing}, OPTSERIES = {}, TITLE = {Outcome Prediction}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1007/978-3-031-05071-8_6}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-04212068/file/Book_2023_Chap6.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-04212068}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{abinader:hal-03514292, AUTHOR = {Abi Nader, Clément and Federica Ribaldi and Giovanni B Frisoni and Valentina Garibotto and Philippe Robert and Nicholas Ayache and Marco Lorenzi}, JOURNAL = {Neurobiology of Aging}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {73-83}, PUBLISHER = {Elsevier}, TITLE = {SimulAD: A dynamical model for personalized simulation and disease staging in Alzheimer's disease}, VOLUME = {113}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.1016/j.neurobiolaging.2021.12.015}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Alzheimer's disease, Disease progression models, Clinical trials, Biomarkers}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03514292/file/nboa_2021_final.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03514292}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{albors:hal-03863600, AUTHOR = {Carlos Albors and Èric Lluch and Juan Francisco Gomez and Nicolas Cedilnik and Konstantinos Mountris and Tommaso Mansi and Svyatoslav Khamzin and Arsenii Dokuchaev and Olga Solovyova and Esther Pueyo and Maxime Sermesant and Rafael Sebastian and Hernán Morales and Oscar Camara}, JOURNAL = {Applied Sciences}, MONTH = {July}, OPTNOTE = {}, NUMBER = {13}, PAGES = {6438}, PUBLISHER = {Multidisciplinary digital publishing institute (MDPI)}, TITLE = {Meshless Electrophysiological Modeling of Cardiac Resynchronization Therapy-Benchmark Analysis with Finite-Element Methods in Experimental Data}, VOLUME = {12}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.3390/app12136438}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03863600}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{audelan:hal-03594219, AUTHOR = {Benoît Audelan and Dimitri Hamzaoui and Sarah Montagne and Raphaële Renard-Penna and Hervé Delingette}, JOURNAL = {Medical Image Analysis}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {102398}, PUBLISHER = {Elsevier}, TITLE = {Robust Bayesian fusion of continuous segmentation maps}, VOLUME = {78}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2022.102398}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Image segmentation, Data fusion, Consensus, Mixture}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03594219/file/manuscript.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03594219}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{ayache:hal-03689197, AUTHOR = {Nicholas Ayache}, JOURNAL = {Pour la Science. Dossier}, MONTH = {May}, NOTE = {The article is available at the following address: https://www.pourlascience.fr/sd/medecine/la-fee-ia-au-chevet-des-malades-23684.php}, NUMBER = {hors série 115}, PAGES = {18-23}, PUBLISHER = {Belin}, SERIES = {Hors série ''Jusqu'où ira l'intelligence artificielle ?''}, TITLE = {La fée IA au chevet des malades}, OPTVOLUME = {}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03689197}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{bacoyannis:hal-03739242, AUTHOR = {Tania Marina Bacoyannis and Buntheng Ly and H Cochet and Maxime Sermesant}, JOURNAL = {EP-Europace}, MONTH = {May}, OPTNOTE = {}, NUMBER = {Supplement_1}, OPTPAGES = {}, PUBLISHER = {Oxford University Press (OUP)}, TITLE = {Deep learning formulation of ECGI evaluated on clinical data}, VOLUME = {24}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.1093/europace/euac053.566}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Electrocardiography, Inverse Problem, Deep learning, Computational Modelling, Generative Model, Data Processing, Clinical Evaluation}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03739242}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{balelli:hal-03644819, AUTHOR = {Irene Balelli and Santiago Silva and Marco Lorenzi}, JOURNAL = {Journal of Machine Learning for Biomedical Imaging}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Melba editors}, TITLE = {A Differentially Private Probabilistic Framework for Modeling the Variability Across Federated Datasets of Heterogeneous Multi-View Observations}, OPTVOLUME = {}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03644819}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{benn:hal-03556752, AUTHOR = {James Benn and Stephen Marsland}, JOURNAL = {Annals of Global Analysis and Geometry}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {47-70}, PUBLISHER = {Springer Verlag}, TITLE = {The Measurement and Analysis of Shapes}, VOLUME = {62}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.1007/s10455-022-09839-z}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Shape, Currents, Hodge theory, Sobolev diffeomorphisms, Euler Equations, Probability densities}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03556752/file/Revision3F.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03556752}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{blanken:hal-03942375, AUTHOR = {Nathan Blanken and Jelmer Wolterink and Herve Delingette and Christoph Brune and Michel Versluis and Guillaume Lajoinie}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {September}, OPTNOTE = {}, NUMBER = {9}, PAGES = {2532-2542}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Super-Resolved Microbubble Localization in Single-Channel Ultrasound RF Signals Using Deep Learning}, VOLUME = {41}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2022.3166443}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03942375}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{dadoun:hal-03583297, AUTHOR = {Hind Dadoun and Anne-Laure Rousseau and de Kerviler, Eric and Jean Michel Correas and Anne-Marie Tissier and Fanny Joujou and Sylvain Bodard and Kemel Khezzane and de Margerie-Mellon, Constance and Hervé Delingette and Nicholas Ayache}, JOURNAL = {Radiology: Artificial Intelligence}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {3}, OPTPAGES = {}, PUBLISHER = {RSNA}, TITLE = {Detection, Localization, and Characterization of Focal Liver Lesions in Abdominal US with Deep Learning}, VOLUME = {4}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.1148/ryai.210110}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03583297}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{guigui:hal-02894783, AUTHOR = {Nicolas Guigui and Xavier Pennec}, JOURNAL = {Foundations of Computational Mathematics}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {757-790}, PUBLISHER = {Springer Verlag}, TITLE = {Numerical Accuracy of Ladder Schemes for Parallel Transport on Manifolds}, VOLUME = {22}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.1007/s10208-021-09515-x}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02894783v3/file/Guigui_et_al-2021-Foundations_of_Computational_Mathematics.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02894783}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{hamzaoui:hal-03888145, AUTHOR = {Dimitri Hamzaoui and Sarah Montagne and Benjamin Granger and Alexandre Allera and Malek Ezziane and Anna Luzurier and Raphaëlle Quint and Mehdi Kalai and Nicholas Ayache and Hervé Delingette and Raphaële Renard-Penna}, JOURNAL = {European Radiology}, OPTMONTH = {}, NOTE = {Correction about the name of the author Raphaële Renard-Penna}, NUMBER = {7}, PAGES = {5035--5035}, PUBLISHER = {Springer Verlag}, TITLE = {Correction to: Prostate Volume Prediction on MRI: Tools, Accuracy and Variability}, VOLUME = {32}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.1007/s00330-022-08688-5}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.sorbonne-universite.fr/hal-03888145}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{hamzaoui:hal-03409262, AUTHOR = {Dimitri Hamzaoui and Sarah Montagne and Benjamin Granger and Alexandre Allera and Malek Ezziane and Anna Luzurier and Raphaële Quint and Mehdi Kalai and Nicholas Ayache and Hervé Delingette and Raphaele Renard-Penna}, JOURNAL = {European Radiology}, MONTH = {February}, NOTE = {The original publication is available at www.springerlink.com: https://link.springer.com/article/10.1007/s00330-022-08554-4}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Springer Verlag}, TITLE = {Prostate volume prediction on MRI: tools, accuracy and variability}, OPTVOLUME = {}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.1007/s00330-022-08554-4}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Prostate, Magnetic Resonance Imaging, Volume, PSA density, Segmentation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03409262/file/EURA-D-21-03295_R1-16-47.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03409262}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{hamzaoui:hal-03587074, AUTHOR = {Dimitri Hamzaoui and Sarah Montagne and Raphaele Renard-Penna and Nicholas Ayache and Hervé Delingette}, JOURNAL = {Journal of Medical Imaging}, MONTH = {March}, OPTNOTE = {}, NUMBER = {2}, PAGES = {024001}, PUBLISHER = {SPIE Digital Library}, TITLE = {Automatic Zonal Segmentation of the Prostate from 2D and 3D T2-weighted MRI and Evaluation for Clinical Use}, VOLUME = {9}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.1117/1.JMI.9.2.024001}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Prostate, Segmentation, Deep Learning, Lesion, Magnetic Resonance Imaging, Inter-rater Variability}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03587074v2/file/JMI-21261R_online.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03587074}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{haxholli:hal-03911884, AUTHOR = {Etrit Haxholli and Marco Lorenzi}, JOURNAL = {Journal of Machine Learning Research}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Microtome Publishing}, TITLE = {On Tail Decay Rate Estimation of Loss Function Distributions}, OPTVOLUME = {}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Extreme Value Theory, Tail Modelling, Loss Function Distributions, Peaks-Over-Threshold, Cross-Tail-Estimation, Model Ranking}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03911884v2/file/JMLR_Camera_Ready_.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03911884}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{ilie:hal-03621585, AUTHOR = {Marius Ilie and Jonathan Benzaquen and Paul Tourniaire and Simon Heeke and Nicholas Ayache and Hervé Delingette and Elodie Long-Mira and Sandra Lassalle and Marame Hamila and Julien Fayada and Josiane Otto and Charlotte Cohen and Gomez Caro, Abel and Jean Philippe Berthet and Charles Hugo Marquette and Véronique Hofman and Christophe Bontoux and Paul Hofman}, JOURNAL = {Cancers}, MONTH = {March}, OPTNOTE = {}, NUMBER = {7}, PAGES = {1740}, PUBLISHER = {MDPI}, TITLE = {Deep learning facilitates distinguishing histologic subtypes of pulmonary neuroendocrine tumors on digital whole-slide images}, VOLUME = {14}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.3390/cancers14071740}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {lung, neuroendocrine carcinoma, deep learning, CNN, HALO-AI}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03621585/file/cancers-14-01740-1.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03621585}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{lareyre:hal-03846183, AUTHOR = {Fabien Lareyre and Christian-Alexander Behrendt and Arindam Chaudhuri and Nicholas Ayache and Juliette Raffort and Hervé Delingette}, JOURNAL = {Angiology}, MONTH = {September}, OPTNOTE = {}, NUMBER = {8}, PAGES = {697-700}, PUBLISHER = {SAGE Publications}, TITLE = {Big Data and Artificial Intelligence in Vascular Surgery: Time for Multidisciplinary Cross-Border Collaboration}, VOLUME = {73}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.1177/00033197221113146}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03846183}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{margeta:hal-03846584, AUTHOR = {Jan Margeta and Raabid Hussain and López Diez, Paula and Anika Morgenstern and Thomas Demarcy and Zihao Wang and Dan Gnansia and Martinez Manzanera, Octavio and Clair Vandersteen and Hervé Delingette and Andreas Buechner and Thomas Lenarz and François Patou and Nicolas Guevara}, JOURNAL = {Journal of Clinical Medicine}, MONTH = {November}, OPTNOTE = {}, NUMBER = {22}, PAGES = {6640}, PUBLISHER = {MDPI}, TITLE = {A Web-Based Automated Image Processing Research Platform for Cochlear Implantation-Related Studies}, VOLUME = {11}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.3390/jcm11226640}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {cochlear implant, image analysis, computed tomography, machine learning, deep learning, image segmentation, 3D model, tonotopic mapping, visualization}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03846584/file/jcm-11-06640.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03846584}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{merle:hal-03934424, AUTHOR = {Mathilde Merle and Florent Collot and Julien Castelneau and Pauline Migerditichan and Mehdi Juhoor and Buntheng Ly and Valery Ozenne and Bruno Quesson and Nejib Zemzemi and Yves Coudière and Pierre Jaïs and Hubert Cochet and Maxime Sermesant}, JOURNAL = {Applied Sciences}, MONTH = {June}, OPTNOTE = {}, NUMBER = {12}, PAGES = {6145}, PUBLISHER = {Multidisciplinary digital publishing institute (MDPI)}, TITLE = {MUSIC: Cardiac Imaging, Modelling and Visualisation Software for Diagnosis and Therapy}, VOLUME = {12}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.3390/app12126145}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {cardiac imaging, multimodal, electrophysiology, deep learning, biophysical modelling, inverse problems}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03934424}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{myers:hal-03903044, AUTHOR = {Adele Myers and Saiteja Utpala and Shubham Talbar and Sophia Sanborn and Christian Shewmake and Claire Donnat and Johan Mathe and Umberto Lupo and Rishi Sonthalia and Xinyue Cui and Tom Szwagier and Arthur Pignet and Andri Bergsson and Soren Hauberg and Dmitriy Nielsen and Stefan Sommer and David Klindt and Erik Hermansen and Melvin Vaupel and Benjamin Dunn and Jeffrey Xiong and Noga Aharony and Itsik Pe'Er and Felix Ambellan and Martin Hanik and Esfandiar Nava-Yazdani and von Tycowicz, Christoph and Nina Miolane}, JOURNAL = {Proceedings of Machine Learning Research}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {269-276}, PUBLISHER = {PMLR}, SERIES = {Topological, Algebraic and Geometric Learning Workshops 2022}, TITLE = {ICLR 2022 Challenge for Computational Geometry & Topology: Design and Results}, VOLUME = {196}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.5281/zenodo.6554616}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03903044/file/myers22a%20%281%29.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03903044}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{nunezgarcia:hal-03909887, AUTHOR = {M Nuñez-Garcia and S Finsterbach and Buntheng Ly and Marco Lorenzi and H Cochet and Maxime Sermesant}, JOURNAL = {EP-Europace}, MONTH = {May}, OPTNOTE = {}, NUMBER = {Supplement_1}, OPTPAGES = {}, PUBLISHER = {Oxford University Press (OUP)}, TITLE = {Long-term remodelling and arrhythmogenicity after myocardial infarction using a novel image-based estimator: the Scar Maturation Score}, VOLUME = {24}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.1093/europace/euac053.042}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03909887}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{rodriguezpadilla:hal-03902767, AUTHOR = {Jairo Rodrìguez-Padilla and Argyrios Petras and Julie Magat and Jason Bayer and Yann Bihan-Poudec and El Hamrani, Dounia and Girish Ramlugun and Aurel Neic and Christoph Augustin and Fanny Vaillant and Marion Constantin and David Benoist and Line Pourtau and Virginie Dubes and Julien Rogier and Louis Labrousse and Olivier Bernus and Bruno Quesson and Michel Haïssaguerre and Matthias Gsell and Gernot Plank and Valéry Ozenne and Edward Vigmond}, JOURNAL = {AJP - Heart and Circulatory Physiology}, MONTH = {June}, OPTNOTE = {}, NUMBER = {6}, PAGES = {H936-H952}, PUBLISHER = {American Physiological Society}, TITLE = {Impact of intraventricular septal fiber orientation on cardiac electromechanical function}, VOLUME = {322}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.1152/ajpheart.00050.2022}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {diffusion tensor imaging, electromechanical models, fiber orientation, intraventricular septum, normal structural discontinuities}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03902767}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{schmidtmengin:hal-03836922, AUTHOR = {Schmidt- Mengin, Marius and Théodore Soulier and Mariem Hamzaoui and Arya Yazdan-Panah and Benedetta Bodini and Nicholas Ayache and Bruno Stankoff and Olivier Colliot}, JOURNAL = {Frontiers in Neuroscience}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {100405}, PUBLISHER = {Frontiers}, TITLE = {Online hard example mining vs. fixed oversampling strategy for segmentation of new multiple sclerosis lesions from longitudinal FLAIR MRI}, VOLUME = {16}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.3389/fnins.2022.1004050}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {New lesions segmentation, Deep learning, Hard example mining, Multiple sclerosis, MRI}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03836922/file/fnins-16-1004050.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03836922}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{thanwerdas:hal-03414887, AUTHOR = {Yann Thanwerdas and Xavier Pennec}, JOURNAL = {Differential Geometry and its Applications}, MONTH = {April}, OPTNOTE = {}, NUMBER = {101867}, OPTPAGES = {}, PUBLISHER = {Elsevier}, TITLE = {The geometry of mixed-Euclidean metrics on symmetric positive definite matrices}, VOLUME = {81}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.1016/j.difgeo.2022.101867}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Symmetric Positive Definite matrices, Riemannian geometry, information geometry, families of metrics, kernel metrics, alpha-Procrustes, mixed-power-Euclidean, mixed-Euclidean, (u, v)-divergence, ($\alpha$, $\beta$)-divergence, 15B48, 53B12, 15A63, 53B20}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03414887/file/main.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03414887}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{thanwerdas:hal-03527072, AUTHOR = {Yann Thanwerdas and Xavier Pennec}, JOURNAL = {SIAM Journal on Matrix Analysis and Applications}, MONTH = {December}, OPTNOTE = {}, NUMBER = {4}, PAGES = {1851-1872}, PUBLISHER = {Society for Industrial and Applied Mathematics}, TITLE = {Theoretically and computationally convenient geometries on full-rank correlation matrices}, VOLUME = {43}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.1137/22M1471729}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {SPD matrices, Correlation matrices, Lie group, Lie group actions, Quotient-affine metric, Lie-Cholesky metrics, Poly-hyperbolic-Cholesky metrics, Euclidean-Cholesky metrics, Log-Euclidean-Cholesky metrics}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03527072v2/file/SIMAX_YT_XP_Convenient_geometries_correlation_HAL.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03527072}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{wu:hal-03923997, AUTHOR = {Carine Wu and Sarah Montagne and Dimitri Hamzaoui and Nicholas Ayache and Hervé Delingette and Raphaële Renard-Penna}, JOURNAL = {Insights into Imaging}, MONTH = {December}, OPTNOTE = {}, NUMBER = {1}, PAGES = {202}, PUBLISHER = {Springer}, TITLE = {Automatic segmentation of prostate zonal anatomy on MRI: a systematic review of the literature}, VOLUME = {13}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.1186/s13244-022-01340-2}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Artificial intelligence, Deep learning, Magnetic resonance imaging, Prostate cancer}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03923997}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{guigui:hal-03684811, OPTADDRESS = {}, AUTHOR = {Nicolas Guigui and Xavier Pennec}, BOOKTITLE = {Geometry and Statistics}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Frank Nielsen and Arni S.R. Srinivasa Rao and C.R. Rao}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {285-326}, PUBLISHER = {Elsevier}, SERIES = {Handbook of Statistics}, TITLE = {Parallel transport, a central tool in geometric statistics for computational anatomy: Application to cardiac motion modeling}, OPTTYPE = {}, VOLUME = {46}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.1016/bs.host.2022.03.006}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Parallel transport, longitudinal studies, mean trajectory, cardiac motion analysis, Schild's ladder, pole ladder, Riemannian manifolds}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03684811/file/H0S_ParallelTransport.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03684811}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{abinader:hal-02968724, AUTHOR = {Abi Nader, Clément and Nicholas Ayache and Giovanni B Frisoni and Philippe Robert and Marco Lorenzi}, JOURNAL = {Brain Communications}, MONTH = {February}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Oxford University Press on behalf of the Guarantors of Brain}, TITLE = {Simulating the outcome of amyloid treatments in Alzheimer's Disease from multi-modal imaging and clinical data}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1093/braincomms/fcab091}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Alzheimer's Disease, Clinical trials, Disease progression, Amyloid hypothesis, Mental State Examination, FAQ = Functional Assessment Questionnaire, RAVLT = Rey Auditory Verbal Learning Test, CDRSB = Clinical Dementia Rating Scale Sum of Boxes}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-02968724v4/file/revised_manuscript.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02968724}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{bacoyannis:hal-03268015, AUTHOR = {Tania Bacoyannis and Buntheng Ly and Nicolas Cedilnik and Hubert Cochet and Maxime Sermesant}, JOURNAL = {EP-Europace}, MONTH = {March}, OPTNOTE = {}, NUMBER = {Supplement_1}, PAGES = {i55-i62}, PUBLISHER = {Oxford University Press (OUP)}, TITLE = {Deep Learning Formulation of ECGI Integrating Image & Signal Information with Data-driven Regularisation}, VOLUME = {23}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1093/europace/euaa391}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Electrocardiographic Imaging, Inverse Problem, Deep learning, Computational Modelling, Generative Model}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03268015/file/europace_2021.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03268015}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{banus:hal-03231513, AUTHOR = {Jaume Banus and Marco Lorenzi and Oscar Camara and Maxime Sermesant}, JOURNAL = {Medical Image Analysis}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Elsevier}, TITLE = {Biophysics-based statistical learning: Application to heart and brain interactions}, VOLUME = {72}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2021.102089}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Lumped model, Cardiovascular modelling, Personalisation, White matter damage, Atrial fibrillation, Heart-Brain interaction}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03231513/file/main.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03231513}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{blancdurand:inserm-03006852, AUTHOR = {Paul Blanc-Durand and Simon Jégou and Salim Kanoun and Alina Berriolo-Riedinger and Caroline M Bodet-Milin and Françoise Kraeber-Bodéré and Thomas Carlier and Le Gouill, Steven and René-Olivier Casasnovas and Michel Meignan and Emmanuel Itti}, JOURNAL = {European Journal of Nuclear Medicine and Molecular Imaging}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {1362-1370}, PUBLISHER = {Springer Verlag (Germany)}, SERIES = {48}, TITLE = {Fully automatic segmentation of diffuse large B cell lymphoma lesions on 3D FDG-PET/CT for total metabolic tumour volume prediction using a convolutional neural network}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1007/s00259-020-05080-7}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Convolutional neural network, Deep learning, Lymphoma, Positron emission tomography, Segmentation, Total metabolic tumour volume, U-net}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inserm.hal.science/inserm-03006852/file/Blanc-Durand2020Eq13.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inserm.hal.science/inserm-03006852}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{casamitjana:hal-03374516, AUTHOR = {Adrià Casamitjana and Marco Lorenzi and Sebastiano Ferraris and Loïc Peter and Marc Modat and Allison Stevens and Bruce Fischl and Tom Vercauteren and Juan Eugenio Iglesias}, JOURNAL = {Medical Image Analysis}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Elsevier}, TITLE = {Robust joint registration of multiple stains and MRI for multimodal 3D histology reconstruction: Application to the Allen human brain atlas}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2021.102265}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {nonlinear registration, 3D reconstruction, linear programming, ex vivo MRI, histology}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03374516/file/2104.14873.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03374516}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{deprez:hal-03477486, AUTHOR = {Marie Deprez and Julien Moreira and Maxime Sermesant and Marco Lorenzi}, JOURNAL = {Frontiers in Molecular Medicine}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Frontiers Media}, TITLE = {Decoding genetic markers of multiple phenotypic layers through biologically constrained Genome-to-Phenome Bayesian Sparse Regression}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.3389/fmmed.2022.830956}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Bayesian, Variational Dropout, Genome, Phenome, Regression, Biological constraint}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03477486/file/G2PSR_hal.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03477486}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{duboc:hal-03477359, AUTHOR = {Véronique Duboc and David Pratella and Marco Milanesio and John Boudjarane and Stéphane Descombes and Véronique Paquis-Flucklinger and Silvia Bottini}, JOURNAL = {Briefings in Bioinformatics}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Oxford University Press (OUP)}, TITLE = {NiPTUNE: an automated pipeline for noninvasive prenatal testing in an accurate, integrative and flexible framework}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1093/bib/bbab380}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03477359}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{duchateau:hal-03538132, AUTHOR = {Nicolas Duchateau and Pamela Moceri and Maxime Sermesant}, JOURNAL = {Journal of The American Society of Echocardiography}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, PAGES = {201-203}, PUBLISHER = {Elsevier}, TITLE = {Direction-dependent decomposition of 3D right ventricular motion: beware of approximations}, VOLUME = {34}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1016/j.echo.2020.08.023}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03538132/file/Duchateau_JASE_2020.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03538132}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{garbarino:hal-03374531, AUTHOR = {Sara Garbarino and Marco Lorenzi}, JOURNAL = {NeuroImage}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {117980}, PUBLISHER = {Elsevier}, TITLE = {Investigating hypotheses of neurodegeneration by learning dynamical systems of protein propagation in the brain}, VOLUME = {235}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1016/j.neuroimage.2021.117980}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Neurodegeneration, Causal model, Dynamical systems, Protein propagation, Gaussian process, Brain connectivity}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03374531/file/S1053811921002573.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03374531}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{jia:hal-03650289, AUTHOR = {Shuman Jia and Hubert Nivet and Josquin Harrison and Xavier Pennec and Claudia Camaioni and Pierre Jaïs and Hubert Cochet and Maxime Sermesant}, JOURNAL = {Heart Rhythm O2}, MONTH = {December}, OPTNOTE = {}, NUMBER = {6}, PAGES = {622-632}, PUBLISHER = {Elsevier}, TITLE = {Left atrial shape is independent predictor of arrhythmia recurrence after catheter ablation for atrial fibrillation: A shape statistics study}, VOLUME = {2}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1016/j.hroo.2021.10.013}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Atrial fibrillation, Catheter ablation, CT, Left atrial shape, Recurrence, Statistical shape modeling}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03650289/file/HRO2Paper.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03650289}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{krebs:hal-03126419, AUTHOR = {Julian Krebs and Hervé Delingette and Nicholas Ayache and Tommaso Mansi}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {February}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Learning a Generative Motion Model from Image Sequences based on a Latent Motion Matrix}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2021.3056531}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {motion model, deformable registration, conditional variational autoencoder, gaussian process, latent variable model, motion interpolation, motion simulation, tracking}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03126419/file/krebs_final.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03126419}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{krebs:hal-03444134, AUTHOR = {Julian Krebs and Tommaso Mansi and Hervé Delingette and Bin Lou and Joao Lima and Susumu Tao and Luisa Ciuffo and Sanaz Norgard and Barbara Butcher and Wei Lee and Ela Chamera and Timm-Michael Dickfeld and Michael Stillabower and Joseph Marine and Robert Weiss and Gordon Tomaselli and Henry Halperin and Katherine Wu and Hiroshi Ashikaga}, JOURNAL = {Scientific Reports}, MONTH = {November}, OPTNOTE = {}, NUMBER = {1}, PAGES = {22683}, PUBLISHER = {Nature Publishing Group}, TITLE = {CinE caRdiac magneTic resonAnce to predIct veNTricular arrhYthmia (CERTAINTY)}, VOLUME = {11}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1038/s41598-021-02111-7}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac device therapy, Ventricular fibrillation, Ventricular tachycardia}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03444134}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{lazaridis:hal-03374545, AUTHOR = {Georgios Lazaridis and Marco Lorenzi and Jibran Mohamed-Noriega and Soledad Aguilar-Munoa and Katsuyoshi Suzuki and Hiroki Nomoto and Sebastien Ourselin and David Garway-Heath and David Crabb and Catey Bunce and Francesca Amalfitano and Nitin Anand and Augusto Azuara-Blanco and Rupert Bourne and David Broadway and Ian Cunliffe and Jeremy Diamond and Scott Fraser and Tuan Ho and Keith Martin and Andrew Mcnaught and Anil Negi and Ameet Shah and Paul Spry and Edward White and Richard Wormald and Wen Xing and Thierry Zeyen}, JOURNAL = {Ophthalmology Glaucoma}, MONTH = {May}, OPTNOTE = {}, NUMBER = {3}, PAGES = {295-304}, PUBLISHER = {Elsevier}, TITLE = {OCT Signal Enhancement with Deep Learning}, VOLUME = {4}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1016/j.ogla.2020.10.008}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Deep learning, Glaucoma, Image analysis, OCT, Visual fields}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03374545}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{lazaridis:hal-03374539, AUTHOR = {Georgios Lazaridis and Marco Lorenzi and Sebastien Ourselin and David Garway-Heath}, JOURNAL = {Medical Image Analysis}, MONTH = {February}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {101906}, PUBLISHER = {Elsevier}, TITLE = {Improving statistical power of glaucoma clinical trials using an ensemble of cyclical generative adversarial networks}, VOLUME = {68}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2020.101906}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Optical coherence tomography, Deep learning, Perceptual loss, GAN, Label fusion, Statistical power, Clinical trials, Glaucoma}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03374539}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{lebrigant:hal-02671122, AUTHOR = {Le Brigant, Alice and Nicolas Guigui and Sana Rebbah and Stéphane Puechmorel}, JOURNAL = {IFAC-PapersOnLine}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Elsevier}, TITLE = {Classifying histograms of medical data using information geometry of beta distributions}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1016/j.ifacol.2021.06.110}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {histogram analysis, clustering, medical imaging, Information geometry, classification}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-02671122v2/file/info-geom-beta.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02671122}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{moceri:hal-03544765, AUTHOR = {Pamela Moceri and Nicolas Duchateau and Delphine Baudouy and Fabien Squara and Sok Sithikun Bun and Emile Ferrari and Maxime Sermesant}, JOURNAL = {European Heart Journal - Cardiovascular Imaging}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Oxford UP}, TITLE = {Additional prognostic value of echocardiographic follow-up in pulmonary hypertension - role of 3D right ventricular area strain}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1093/ehjci/jeab240}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Pulmonary hypertension, right ventricular function, 3D echocardiography, myocardial deformation imaging}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03544765/file/Moceri_EHJCI_2021.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03544765}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{moceri:hal-03544761, AUTHOR = {Pamela Moceri and Nicolas Duchateau and Benjamin Sartre and Delphine Baudouy and Fabien Squara and Maxime Sermesant and Emile Ferrari}, JOURNAL = {Echocardiography}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Wiley}, TITLE = {Value of 3D right ventricular function over 2D assessment in acute pulmonary embolism}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1111/echo.15167}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {pulmonary embolism, right ventricular function, 3D echocardiography, speckle-tracking}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03544761/file/Moceri_ECHO_2021.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03544761}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{montagne:hal-03221227, AUTHOR = {Sarah Montagne and Dimitri Hamzaoui and Alexandre Allera and Malek Ezziane and Anna Luzurier and Raphaële Quint and Mehdi Kalai and Nicholas Ayache and Hervé Delingette and Renard Penna, Raphaele}, JOURNAL = {Insights into Imaging}, MONTH = {June}, OPTNOTE = {}, NUMBER = {1}, OPTPAGES = {}, PUBLISHER = {Springer}, TITLE = {Challenge of prostate MRI segmentation on T2-weighted images: inter-observer variability and impact of prostate morphology}, VOLUME = {12}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1186/s13244-021-01010-9}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Prostate, MRI, Segmentation, Zones, Atlas}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03221227/file/s13244-021-01010-9.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03221227}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{nir:hal-03241929, AUTHOR = {Talia M Nir and Jean-Paul Fouche and Jintanat Ananworanich and Beau M Ances and Jasmina Boban and Bruce J Brew and Joga R Chaganti and Linda Chang and Christopher R K Ching and Lucette A Cysique and Thomas Ernst and Joshua Faskowitz and Vikash Gupta and Jaroslaw Harezlak and Jodi M Heaps-Woodruff and Charles H Hinkin and Jacqueline Hoare and John A Joska and Kalpana J Kallianpur and Taylor Kuhn and Hei y Lam and Meng Law and Christine Lebrun-Frénay and Andrew J Levine and Lydiane Mondot and Beau K Nakamoto and Bradford A Navia and Xavier Pennec and Eric C Porges and Lauren E Salminen and Cecilia M Shikuma and Wesley Surento and April D Thames and Victor Valcour and Matteo Vassallo and Adam J Woods and Paul M Thompson and Ronald A Cohen and Robert Paul and Dan J Stein and Neda Jahanshad}, JOURNAL = {JAMA Network Open}, MONTH = {January}, OPTNOTE = {}, NUMBER = {1}, PAGES = {e2031190}, PUBLISHER = {American Medical Association}, TITLE = {Association of Immunosuppression and Viral Load With Subcortical Brain Volume in an International Sample of People Living With HIV}, VOLUME = {4}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1001/jamanetworkopen.2020.31190}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03241929/file/nir_2021_oi_200975_1610549581.70404%282%29.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03241929}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{sermesant:hal-03171141, AUTHOR = {Maxime Sermesant and Hervé Delingette and Hubert Cochet and Pierre Jaïs and Nicholas Ayache}, JOURNAL = {Nature Reviews Cardiology}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {600-609}, PUBLISHER = {Nature Publishing Group}, TITLE = {Applications of artificial intelligence in cardiovascular imaging}, VOLUME = {18}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1038/s41569-021-00527-2}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiology, Machine learning, Medical imaging}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03171141}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{stolyarchuk:hal-03042382, AUTHOR = {Maxim Stolyarchuk and Julie Ledoux and Elodie Maignant and Alain Trouvé and Luba Tchertanov}, JOURNAL = {International Journal of Molecular Sciences}, MONTH = {January}, OPTNOTE = {}, NUMBER = {2}, PAGES = {802}, PUBLISHER = {MDPI}, TITLE = {Identification of the Primary Factors Determining the Specificity of the human VKORC1 Recognition by Thioredoxin-fold Proteins}, VOLUME = {22}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.3390/ijms22020802}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Trx-fold proteins, protein folding, dynamics, molecular recognition, thioldisulphide exchange, protein-protein interactions, PDI-hVKORC1 complex, 3D modelling, molecular dynamics simulation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03042382v2/file/Tchertanov_ijms-2021.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03042382}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{wang:hal-03372777, AUTHOR = {Zihao Wang and Thomas Demarcy and Clair Vandersteen and Dan Gnansia and Charles Raffaelli and Nicolas Guevara and Hervé Delingette}, JOURNAL = {Medical Image Analysis}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {102268}, PUBLISHER = {Elsevier}, TITLE = {Bayesian Logistic Shape Model Inference: application to cochlear image segmentation}, VOLUME = {75}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2021.102268}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Bayesian Inference, Image Segmentation, Shape Modeling}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03372777/file/2105.02045.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03372777}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{wang:hal-03351225, AUTHOR = {Zihao Wang and Clair Vandersteen and Thomas Demarcy and Dan Gnansia and Charles Raffaelli and Nicolas Guevara and Hervé Delingette}, JOURNAL = {Computerized Medical Imaging and Graphics}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {101990}, PUBLISHER = {Elsevier}, TITLE = {Inner-ear Augmented Metal Artifact Reduction with Simulation-based 3D Generative Adversarial Networks}, VOLUME = {93}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1016/j.compmedimag.2021.101990}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Artifact Reduction, Deep Learning, GAN}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03351225/file/Margan_Clean_Latex%20%281%29.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03351225}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{xu:hal-03219748, AUTHOR = {Zhifei Xu and Zihao Wang and Yin Sun and Chulsoon Hwang and Hervé Delingette and Jun Fan}, JOURNAL = {IEEE Transactions on Microwave Theory and Techniques}, MONTH = {June}, NOTE = {Corresponding authors: Zihao Wang; Chulsoon Hwang.}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Jitter Aware Economic PDN Optimization with a Genetic Algorithm}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1109/TMTT.2021.3087188}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {PDN, Jitter, PSIJ, Decoupling capacitor, Genetic algorithm, Power integrity}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03219748/file/IEEE_Journal_Submission_JItter_aware_PDN_study%20%283%29.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03219748}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{zhou:hal-03375000, AUTHOR = {Kevin Zhou and Hoang Ngan Le and Khoa Luu and van Nguyen, Hien and Nicholas Ayache}, JOURNAL = {Medical Image Analysis}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {102193}, PUBLISHER = {Elsevier}, TITLE = {Deep reinforcement learning in medical imaging: A literature review}, VOLUME = {73}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2021.102193}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03375000}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{ayache:hal-03374760, OPTADDRESS = {}, AUTHOR = {Nicholas Ayache}, BOOKTITLE = {Digital Anatomy - Applications of Virtual, Mixed and Augmented Reality}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Jean-François Uhl and Joaquim Jorge and Daniel Simoes Lopes and Pedro F Campos}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Springer Nature}, SERIES = {Human--Computer Interaction Series}, TITLE = {Foreword}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-61905-3}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03374760/file/Foreword%20-%20Digital%20Anatomy.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03374760}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{pennec:hal-02925156, OPTADDRESS = {}, AUTHOR = {Xavier Pennec}, BOOKTITLE = {Digital Anatomy - Applications of Virtual, Mixed and Augmented Reality}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Jean-François Uhl and Joaquim Jorge and Daniel Simoes Lopes and Pedro F Campos}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Springer Nature}, SERIES = {Human--Computer Interaction Series}, TITLE = {Statistical analysis of organs' shapes and deformations: the Riemannian and the affine settings in computational anatomy}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-61905-3_9}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02925156/file/2020_CompAnat_Pennec.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02925156}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{audelan:hal-03044140, AUTHOR = {Benoît Audelan and Hervé Delingette}, JOURNAL = {Medical Image Analysis}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {101895}, PUBLISHER = {Elsevier}, TITLE = {Unsupervised quality control of segmentations based on a smoothness and intensity probabilistic model}, VOLUME = {68}, YEAR = {2020}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2020.101895}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Unsupervised quality control, Image segmentation, Bayesian learning, Unsupervised quality control}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03044140/file/revised_manuscript.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03044140}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{blancdurand:hal-03138538, AUTHOR = {Paul Blanc-Durand and Jean-Baptiste. Schiratti and Kathryn Schutte and Paul Jehanno and Paul Herent and Frédéric Pigneur and Olivier Lucidarme and Y. Benaceur and Alexandre Sadate and Alain Luciani and Olivier Ernst and A. Rouchaud and Maud Creze and Alex Dallongeville and Nathan Banaste and Mehdi Cadi and Imad Bousaid and Nathalie Lassau and Simon Jégou}, JOURNAL = {Diagnostic and Interventional Imaging}, MONTH = {December}, OPTNOTE = {}, NUMBER = {12}, PAGES = {789-794}, PUBLISHER = {Elsevier}, TITLE = {Abdominal musculature segmentation and surface prediction from CT using deep learning for sarcopenia assessment}, VOLUME = {101}, YEAR = {2020}, OPTABSTRACT = {}, DOI = {10.1016/j.diii.2020.04.011}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Convolutional neural networks (CNN), Deep learning, Muscular body bass, Sarcopenia, Tomography, X-ray computed}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03138538/file/S2211568420301224.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03138538}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{chevallier:hal-02568245, AUTHOR = {Emmanuel Chevallier and Nicolas Guigui}, JOURNAL = {Entropy}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {4}, PAGES = {432}, PUBLISHER = {MDPI}, TITLE = {A Bi-Invariant Statistical Model Parametrized by Mean and Covariance on Rigid Motions}, VOLUME = {22}, YEAR = {2020}, OPTABSTRACT = {}, DOI = {10.3390/e22040432}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {moment-matching estimator, Euclidean groups, density estimation, wrapped distributions, rigid motions, sampling, differential of the exponential}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-02568245/file/SEnHAL_Chevallier_Guigui.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02568245}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{duncan:hal-02395429, AUTHOR = {James S Duncan and Michel F Insana and Nicholas Ayache}, JOURNAL = {Proceedings of the IEEE}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {3-10}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Biomedical Imaging and Analysis In the Age of Big Data and Deep Learning}, VOLUME = {14}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-02395429v2/file/Proceedings_of_IEEE_Editors_Overview_Article-10.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02395429}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{heeke:hal-02972033, AUTHOR = {Simon Heeke and Jonathan Benzaquen and Véronique Hofman and Elodie Long-Mira and Virginie Lespinet and Olivier Bordone and Charles-Hugo Marquette and Hervé Delingette and Marius Ilié and Paul Hofman}, JOURNAL = {Journal of Thoracic Oncology}, MONTH = {September}, OPTNOTE = {}, NUMBER = {9}, PAGES = {1535-1540}, PUBLISHER = {Lippincott, Williams & Wilkins}, TITLE = {Comparison of Three Sequencing Panels Used for the Assessment of Tumor Mutational Burden in NSCLC Reveals Low Comparability}, VOLUME = {15}, YEAR = {2020}, OPTABSTRACT = {}, DOI = {10.1016/j.jtho.2020.05.013}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02972033}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{miolane:hal-02536154, AUTHOR = {Nina Miolane and Nicolas Guigui and Le Brigant, Alice and Johan Mathe and Benjamin Hou and Yann Thanwerdas and Stefan Heyder and Olivier Peltre and Niklas Koep and Hadi Zaatiti and Hatem Hajri and Yann Cabanes and Thomas Gerald and Paul Chauchat and Christian Shewmake and Daniel Brooks and Bernhard Kainz and Claire Donnat and Susan Holmes and Xavier Pennec}, JOURNAL = {Journal of Machine Learning Research}, MONTH = {December}, OPTNOTE = {}, NUMBER = {223}, PAGES = {1-9}, PUBLISHER = {Microtome Publishing}, TITLE = {Geomstats: A Python Package for Riemannian Geometry in Machine Learning}, VOLUME = {21}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {differential geometry, Riemannian geometry, statistics, machine learning, manifold}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02536154v2/file/19-027.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02536154}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{mlynarski:hal-02181181, AUTHOR = {Pawel Mlynarski and Hervé Delingette and Hamza A Alghamdi and Pierre-Yves Bondiau and Nicholas Ayache}, JOURNAL = {Journal of Medical Imaging}, MONTH = {February}, OPTNOTE = {}, NUMBER = {1}, PAGES = {1--21}, PUBLISHER = {SPIE Digital Library}, TITLE = {Anatomically consistent CNN-based segmentation of organs-at-risk in cranial radiotherapy}, VOLUME = {7}, YEAR = {2020}, OPTABSTRACT = {}, DOI = {10.1117/1.JMI.7.1.014502}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {segmentation, organs at risk, Convolutional Neural Networks, radiotherapy, MRI}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02181181v2/file/article.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02181181}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{moceri:hal-02913107, AUTHOR = {Pamela Moceri and Nicolas Duchateau and Stephane Gillon and Lolita Jaunay and Delphine Baudouy and Fabien Squara and Emile Ferrari and Maxime Sermesant}, JOURNAL = {European Heart Journal - Cardiovascular Imaging}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Oxford UP}, TITLE = {3D right ventricular shape and strain in congenital heart disease patients with right ventricular chronic volume loading}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-02913107/file/Moceri_EHJCI_2020.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02913107}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{orlhac:hal-02945627, AUTHOR = {Fanny Orlhac and Augustin Lecler and Julien Savatovski and Jessica Goya-Outi and Christophe Nioche and Frédérique Charbonneau and Nicholas Ayache and Frédérique Frouin and Loïc Duron and Irène Buvat}, JOURNAL = {European Radiology}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Springer Verlag}, TITLE = {How can we combat multicenter variability in MR radiomics? Validation of a correction procedure}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-02945627/file/Manuscrit_HAL.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02945627}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{sivera:hal-02166357, AUTHOR = {Raphaël Sivera and Nicolas Capet and Valeria Manera and Roxane Fabre and Marco Lorenzi and Hervé Delingette and Xavier Pennec and Nicholas Ayache and Philippe Robert}, JOURNAL = {Neurobiology of Aging}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {50-59}, PUBLISHER = {Elsevier}, TITLE = {Voxel-based assessments of treatment effects on longitudinal brain changes in the Multidomain Alzheimer Preventive Trial cohort}, VOLUME = {94}, YEAR = {2020}, OPTABSTRACT = {}, DOI = {10.1016/j.neurobiolaging.2019.11.020}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Multidomain intervention, Clinical trial, Subjective memory complaint, Deformation-based morphometry}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02166357v2/file/paper-mapt-final.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02166357}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{wei:hal-02922534, AUTHOR = {Wen Wei and Emilie Poirion and Benedetta Bodini and Matteo Tonietto and Stanley Durrleman and Olivier Colliot and Bruno Stankoff and Nicholas Ayache}, JOURNAL = {NeuroImage}, MONTH = {December}, OPTNOTE = {}, NUMBER = {117308}, OPTPAGES = {}, PUBLISHER = {Elsevier}, TITLE = {Predicting PET-derived Myelin Content from Multisequence MRI for Individual Longitudinal Analysis in Multiple Sclerosis}, VOLUME = {223C}, YEAR = {2020}, OPTABSTRACT = {}, DOI = {10.1016/j.neuroimage.2020.117308}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Conditional GANs, Attention Mechanism, PET Imaging, Multisequence MRI, Demyelination and Remyelination, Deep Learning, Multiple Sclerosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02922534/file/elsarticle-template.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02922534}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{zheng:hal-02043380, AUTHOR = {Qiao Zheng and Hervé Delingette and Kenneth Fung and Steffen E Petersen and Nicholas Ayache}, JOURNAL = {Frontiers in Cardiovascular Medicine}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {164}, PUBLISHER = {Frontiers Media}, TITLE = {Pathological Cluster Identification by Unsupervised Analysis in 3,822 UK Biobank Cardiac MRIs}, VOLUME = {7}, YEAR = {2020}, OPTABSTRACT = {}, DOI = {10.3389/fcvm.2020.539788}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cluster analysis, Gaussian mixture model, Cine MRI, Cardiac pathology, Feature extraction, UK Biobank, Cardiac motion}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02043380/file/1902.05811.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02043380}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{ayache:hal-02522507, OPTADDRESS = {}, AUTHOR = {Nicholas Ayache}, BOOKTITLE = {Healthcare and Artificial Intelligence}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Nordlinger B. and Villani C. and Rus D.}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {89-91}, PUBLISHER = {Springer International Publishing}, OPTSERIES = {}, TITLE = {Medical Imaging in the Age of Artificial Intelligence}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-32161-1_13}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02522507/file/Ayache-Nordlinger2020-AuthorVersion.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02522507}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{miolane:hal-02342155, OPTADDRESS = {}, AUTHOR = {Nina Miolane and Loïc Devilliers and Xavier Pennec}, BOOKTITLE = {Riemannian Geometric Statistics in Medical Image Analysis}, OPTCHAPTER = {}, OPTEDITION = {}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {Chap. 9}, PAGES = {343-376}, PUBLISHER = {Elsevier}, OPTSERIES = {}, TITLE = {Bias on estimation in quotient space and correction methods: Applications to statistics on organ shapes}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, DOI = {10.1016/B978-0-12-814725-2.00017-0}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02342155/file/chapterQuotient.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02342155}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{pennec:hal-02560938, OPTADDRESS = {}, AUTHOR = {Xavier Pennec}, BOOKTITLE = {Handbook of Variational Methods for Nonlinear Geometric Data}, OPTCHAPTER = {}, OPTEDITION = {}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {339-359}, PUBLISHER = {Springer International Publishing}, OPTSERIES = {}, TITLE = {Advances in Geometric Statistics for Manifold Dimension Reduction}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-31351-7_11}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02560938/file/XP_GeomStats_ManifoldReductionPCA.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02560938}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{pennec:hal-02341958, OPTADDRESS = {}, AUTHOR = {Xavier Pennec}, BOOKTITLE = {Riemannian Geometric Statistics in Medical Image Analysis}, OPTCHAPTER = {}, OPTEDITION = {}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {Chap. 3}, PAGES = {75-134}, PUBLISHER = {Elsevier}, OPTSERIES = {}, TITLE = {Manifold-valued image processing with SPD matrices}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, DOI = {10.1016/B978-0-12-814725-2.00010-8}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02341958/file/chapter3.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02341958}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{pennec:hal-02342137, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Marco Lorenzi}, BOOKTITLE = {Riemannian Geometric Statistics in Medical Image Analysis}, OPTCHAPTER = {}, OPTEDITION = {}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {Chap. 5}, PAGES = {169-229}, PUBLISHER = {Elsevier}, OPTSERIES = {}, TITLE = {Beyond Riemannian geometry: The affine connection setting for transformation groups}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, DOI = {10.1016/B978-0-12-814725-2.00012-1}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02342137/file/chapter5.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02342137}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{sommer:hal-02341901, OPTADDRESS = {}, AUTHOR = {Stefan Sommer and Tom Fletcher and Xavier Pennec}, BOOKTITLE = {Riemannian Geometric Statistics in Medical Image Analysis}, OPTCHAPTER = {}, OPTEDITION = {}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {Chap. 1}, PAGES = {3-37}, PUBLISHER = {Elsevier}, OPTSERIES = {}, TITLE = {Introduction to differential and Riemannian geometry}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, DOI = {10.1016/b978-0-12-814725-2.00008-x}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02341901/file/chapter1.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02341901}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{abinader:hal-02051843, AUTHOR = {Abi Nader, Clement and Nicholas Ayache and Philippe Robert and Marco Lorenzi}, JOURNAL = {NeuroImage}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Elsevier}, TITLE = {Monotonic Gaussian Process for Spatio-Temporal Disease Progression Modeling in Brain Imaging Data}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Stochastic variational inference, Clinical trials, Bayesian modeling, Alzheimer's disease, Disease progression modeling, Gaussian Process}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-02051843v3/file/revised_manuscript.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02051843}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{antelmi:hal-02395747, AUTHOR = {Luigi Antelmi and Nicholas Ayache and Philippe Robert and Marco Lorenzi}, JOURNAL = {Proceedings of Machine Learning Research}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {97}, PAGES = {302--311}, PUBLISHER = {PMLR}, SERIES = {Proceedings of ICML 2019}, TITLE = {Sparse Multi-Channel Variational Autoencoder for the Joint Analysis of Heterogeneous Data}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02395747/file/antelmi19.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02395747}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{ayache:hal-02404520, AUTHOR = {Nicholas Ayache and Sara Colantonio}, JOURNAL = {ERCIM News}, MONTH = {July}, OPTNOTE = {}, NUMBER = {118}, PAGES = {4-5}, PUBLISHER = {ERCIM}, TITLE = {The Digital Health Revolution - Introduction to the Special Theme}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02404520}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{berge:hal-01835074, AUTHOR = {Laurent Bergé and Charles Bouveyron and Marco Corneli and Pierre Latouche}, JOURNAL = {Computational Statistics and Data Analysis}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {247-270}, PUBLISHER = {Elsevier}, TITLE = {The Latent Topic Block Model for the Co-Clustering of Textual Interaction Data}, VOLUME = {137}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01835074/file/LTBMpaper.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01835074}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{callegari:hal-03477646, AUTHOR = {Christian Callegari and Marco Milanesio and Pietro Michiardi}, JOURNAL = {International Journal of Communication Systems}, MONTH = {April}, OPTNOTE = {}, NUMBER = {6}, PAGES = {e3908}, PUBLISHER = {Wiley}, TITLE = {Network level perspective in web sessions troubleshooting}, VOLUME = {32}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1002/dac.3908}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03477646}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{compes:hal-02076599, AUTHOR = {Paloma Compes and Emeline Tabouret and Amandine Etcheverry and Carole Colin and Romain Appay and Nicolas Cordier and Jean Mosser and Olivier Chinot and Hervé Delingette and Nadine Girard and Henry Dufour and Philippe Metellus and Dominique Figarella-Branger}, JOURNAL = {Journal of Neuro-Oncology}, MONTH = {May}, OPTNOTE = {}, NUMBER = {3}, PAGES = {511-520}, PUBLISHER = {Springer Verlag}, TITLE = {Neuro-radiological characteristics of adult diffuse grade II and III insular gliomas classified according to WHO 2016}, VOLUME = {142}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1007/s11060-019-03122-1}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Molecular, Glioma, Neuro-radiology, Insula, Perfusion}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://univ-rennes.hal.science/hal-02076599}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{cury:inserm-01958916, AUTHOR = {Claire Cury and Stanley Durrleman and David Cash and Marco Lorenzi and Jennifer M Nicholas and Martina Bocchetta and van Swieten, John C. and Barbara Borroni and Daniela Galimberti and Mario Masellis and Maria Carmela Tartaglia and James Rowe and Caroline Graff and Fabrizio Tagliavini and Giovanni B. Frisoni and Robert Laforce and Elizabeth Finger and de Mendonça, Alexandre and Sandro Sorbi and Sébastien Ourselin and Jonathan Rohrer and Marc Modat and Christin Andersson and Silvana Archetti and Andrea Arighi and Luisa Benussi and Sandra Black and Maura Cosseddu and Marie Fallstrm and Carlos G. Ferreira and Chiara Fenoglio and Nick Fox and Morris Freedman and Giorgio Fumagalli and Stefano Gazzina and Robert Ghidoni and Marina Grisoli and Vesna Jelic and Lize Jiskoot and Ron Keren and Gemma Lombardi and Carolina Maruta and Lieke Meeter and van Minkelen, Rick and Benedetta Nacmias and Linn Ijerstedt and Alessandro Padovani and Jessica Panman and Michela Pievani and Cristina Polito and Enrico Premi and Sara Prioni and Rosa Rademakers and Veronica Redaelli and Ekaterina Rogaeva and Giacomina Rossi and Martin Rossor and Elio Scarpini and David Tang-Wai and Hakan Thonberg and Pietro Tiraboschi and Ana Verdelho and Jason Warren}, JOURNAL = {NeuroImage}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {282-290}, PUBLISHER = {Elsevier}, TITLE = {Spatiotemporal analysis for detection of pre-symptomatic shape changes in neurodegenerative diseases: Initial application to the GENFI cohort}, VOLUME = {188}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1016/j.neuroimage.2018.11.063}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Clustering, Thalamus, Spatiotemporal geodesic regression, Parallel transport, Computational anatomy, Shape analysis}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inserm.hal.science/inserm-01958916/file/Spatio_temporal_analysis_GENFI_lastSub_black.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inserm.hal.science/inserm-01958916}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{demarcy:hal-02270604, AUTHOR = {Thomas Demarcy and Isabelle Pélisson and Dan Gnansia and Hervé Delingette and Nicholas Ayache and Charles Raffaelli and Clair Vandersteen and Nicolas Guevara}, JOURNAL = {Cahiers de l'audition}, MONTH = {July}, OPTNOTE = {}, NUMBER = {4}, PAGES = {36-40}, PUBLISHER = {Elsevier}, TITLE = {Un modèle de reconstruction tridimensionnelle de la cochlée au service de l'implantation cochléaire}, VOLUME = {32}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02270604}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{doste:hal-02128531, AUTHOR = {Rubén Doste and David Soto-iglesias and Gabriel Bernardino and Alejandro Alcaine and Rafael Sebastian and Sophie Giffard-Roisin and Maxime Sermesant and Antonio Berruezo and Damian Sanchez-quintana and Oscar Camara}, JOURNAL = {International Journal for Numerical Methods in Biomedical Engineering}, MONTH = {March}, OPTNOTE = {}, NUMBER = {4}, OPTPAGES = {}, PUBLISHER = {John Wiley and Sons}, SERIES = {International Journal for Numerical Methods in Biomedical Engineering}, TITLE = {A rule-based method to model myocardial fiber orientation in cardiac biventricular geometries with outflow tracts}, VOLUME = {35}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1002/cnm.3185}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Rule-based method, Fiber orientation, Outflow tract, Septum, Electrophysiological simulations, Outflow tract ventricular arrhythmia}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02128531}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{heeke:hal-02381188, AUTHOR = {Simon Heeke and Jonathan Benzaquen and Elodie Long-Mira and Benoît Audelan and Virginie Lespinet and Olivier Bordone and Salomé Lalvée and Katia Zahaf and Michel Poudenx and Olivier Humbert and Henri Montaudié and Pierre-Michel Dugourd and Madleen Chassang and Thierry Passeron and Hervé Delingette and Charles-Hugo Marquette and Véronique Hofman and Albrecht Stenzinger and Marius Ilié and Paul Hofman}, JOURNAL = {Cancers}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {MDPI}, TITLE = {In-House Implementation of Tumor Mutational Burden Testing to Predict Durable Clinical Benefit in Non-Small Cell Lung Cancer and Melanoma Patients}, VOLUME = {11}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.3390/cancers11091271}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tumor mutational burden, FoundationOne assay, Oncomine TML assay, lung cancer, melanoma, immunotherapy}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02381188/file/cancers-11-01271-v2%281%29.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02381188}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{heeke:hal-02446712, AUTHOR = {Simon Heeke and Hervé Delingette and Youta Fanjat and Elodie Long-Mira and Sandra Lassalle and Véronique Hofman and Jonathan Benzaquen and Charles-Hugo Marquette and Paul Hofman and Marius Ilié}, JOURNAL = {Annales de Pathologie}, MONTH = {April}, OPTNOTE = {}, NUMBER = {2}, PAGES = {130-136}, PUBLISHER = {Elsevier Masson}, TITLE = {La pathologie cancéreuse pulmonaire à l'heure de l'intelligence artificielle : entre espoir, désespoir et perspectives}, VOLUME = {39}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1016/j.annpat.2019.01.003}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Pathology, Histology, Lung cancer, Artificial intelligence, Convolutional neural networks, Deep learning, Pathologie Apprentissage profond, Histologie, Cancer broncho-pulmonair, Intelligence artificielle, Réseaux de neurones convolutifs, Apprentissage profond}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02446712/file/S0242649819300197.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02446712}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{hofman:hal-02045442, AUTHOR = {Paul Hofman and Nicholas Ayache and Pascal Barbry and Michel Barlaud and Audrey Bel and Philippe Blancou and Frédéric Checler and Sylvie Chevillard and Gael Cristofari and Mathilde Demory and Vincent Esnault and Claire Falandry and Eric Gilson and Olivier Guerin and Nicolas Glaichenhaus and Joël Guigay and Marius I. Ilie and Bernard Mari and Charles-Hugo Marquette and Véronique Paquis-Flucklinger and Frédéric Prate and Pierre Saintigny and Barbara Seitz-Polsky and Taycir Skhiri and van Obberghen-Schilling, Ellen and Emmanuel Van Obberghen and Laurent Yvan-Charvet}, JOURNAL = {Cancers}, MONTH = {February}, OPTNOTE = {}, NUMBER = {2}, PAGES = {1-11}, PUBLISHER = {MDPI}, TITLE = {The OncoAge Consortium: Linking Aging and Oncology from Bench to Bedside and Back Again}, VOLUME = {11}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.3390/cancers11020250}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {education, elderly, optimization, research, well-being, aging, cancer}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02045442/file/cancers-11-00250.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02045442}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{krebs:hal-01978339, AUTHOR = {Julian Krebs and Hervé Delingette and Boris Mailhé and Nicholas Ayache and Tommaso Mansi}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {February}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {2165-2176}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Learning a Probabilistic Model for Diffeomorphic Registration}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2019.2897112}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {deformable registration, deformation transport, latent variable model, probabilistic encoding, conditional variational autoencoder, deep learning}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01978339/file/author_files.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01978339}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{mlynarski:hal-01883716, AUTHOR = {Pawel Mlynarski and Hervé Delingette and Antonio Criminisi and Nicholas Ayache}, JOURNAL = {Computerized Medical Imaging and Graphics}, MONTH = {February}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {60-72}, PUBLISHER = {Elsevier}, TITLE = {3D Convolutional Neural Networks for Tumor Segmentation using Long-range 2D Context}, VOLUME = {73}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1016/j.compmedimag.2019.02.001}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Brain tumor, Multisequence MRI, Segmentation, 3D Convolutional Neural Networks, Ensembles of models}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01883716v2/file/Pawel_Mlynarski_segmentation.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01883716}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{mlynarski:hal-01952458, AUTHOR = {Pawel Mlynarski and Hervé Delingette and Antonio Criminisi and Nicholas Ayache}, JOURNAL = {Journal of Medical Imaging}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {SPIE Digital Library}, TITLE = {Deep Learning with Mixed Supervision for Brain Tumor Segmentation}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1117/1.JMI.6.3.034002}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Semi-supervised learning, tumor, segmentation, Convolutional Neural Networks, Convolutional N..., Semi-supervised..., MRI}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01952458/file/Pawel_Mlynarski_Mixed_Supervision_ArXiv.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01952458}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{mollero:hal-01922719, AUTHOR = {Roch Molléro and Xavier Pennec and Hervé Delingette and Nicholas Ayache and Maxime Sermesant}, JOURNAL = {International Journal for Numerical Methods in Biomedical Engineering}, MONTH = {February}, OPTNOTE = {}, NUMBER = {2}, PAGES = {e3158}, PUBLISHER = {John Wiley and Sons}, TITLE = {Population-based priors in cardiac model personalisation for consistent parameter estimation in heterogeneous databases}, VOLUME = {35}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1002/cnm.3158}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac Electromechanical Modeling, Parameter Estimation, Personalised modeling, Parameter Selection}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01922719/file/Special_Issue___Longitudinal_with_Priors_Refactoring-3.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01922719}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{orlhac:hal-02404530, AUTHOR = {Fanny Orlhac and Charles Bouveyron and Nicholas Ayache}, JOURNAL = {ERCIM News}, MONTH = {July}, OPTNOTE = {}, NUMBER = {118}, PAGES = {7-8}, PUBLISHER = {ERCIM}, TITLE = {Radiomics: How to Make Medical Images Speak?}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02404530}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{orlhac:hal-02401340, AUTHOR = {Fanny Orlhac and Frédérique Frouin and Christophe Nioche and Nicholas Ayache and Irène Buvat}, JOURNAL = {Radiology}, MONTH = {April}, OPTNOTE = {}, NUMBER = {1}, PAGES = {53-59}, PUBLISHER = {Radiological Society of North America}, TITLE = {Validation of A Method to Compensate Multicenter Effects Affecting CT Radiomics}, VOLUME = {291}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1148/radiol.2019182023}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-02401340/file/radiol.2019182023.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02401340}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{sermesant:hal-02404534, AUTHOR = {Maxime Sermesant}, JOURNAL = {ERCIM News}, MONTH = {July}, OPTNOTE = {}, NUMBER = {118}, PAGES = {10-11}, PUBLISHER = {ERCIM}, TITLE = {Improving Cardiac Arrhythmia Therapy with Medical Imaging}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02404534}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{sivera:hal-01948174, AUTHOR = {Raphaël Sivera and Hervé Delingette and Marco Lorenzi and Xavier Pennec and Nicholas Ayache}, JOURNAL = {NeuroImage}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {255-270}, PUBLISHER = {Elsevier}, TITLE = {A model of brain morphological changes related to aging and Alzheimer's disease from cross-sectional assessments}, VOLUME = {198}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1016/j.neuroimage.2019.05.040}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Imaging biomarkers, Aging, Spatio-temporal model, Brain morphology, Deformations, Alzheimer's disease}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01948174v3/file/paper-stripped.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01948174}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{takigawa:hal-02181776, AUTHOR = {Masateru Takigawa and Josselin Duchateau and Frederic Sacher and Ruairidh Martin and Konstantinos Vlachos and Takeshi Kitamura and Maxime Sermesant and Nicolas Cedilnik and Ghassen Cheniti and Antonio Frontera and Nathaniel Thompson and Calire Martin and Grégoire Massoullié and Felix Bourier and Anna Lam and Michael Wolf and William Escande and Clémentine André and Thomas Pambrun and Arnaud Denis and Nicolas Derval and Mélèze Hocini and Michel Haïssaguerre and Hubert Cochet and Pierre Jaïs}, JOURNAL = {Heart Rhythm}, MONTH = {June}, OPTNOTE = {}, NUMBER = {11}, PAGES = {1661-1668}, PUBLISHER = {Elsevier}, SERIES = {Heart Rhythm}, TITLE = {Are wall thickness channels defined by computed tomography predictive of isthmuses of postinfarction ventricular tachycardia?}, VOLUME = {16}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1016/j.hrthm.2019.06.012}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Wall thickness, Isthmus, High-resolution mapping, Contrart-enhanced multidetector computed tomography, MUSIC, Myocardial infarction, Ventricular tachycardia}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02181776/file/S1547527119305570.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02181776}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{wei:hal-02276634, AUTHOR = {Wen Wei and Emilie Poirion and Benedetta Bodini and Stanley Durrleman and Nicholas Ayache and Bruno Stankoff and Olivier Colliot}, JOURNAL = {Medical Image Analysis}, MONTH = {December}, OPTNOTE = {}, NUMBER = {101546}, OPTPAGES = {}, PUBLISHER = {Elsevier}, TITLE = {Predicting PET-derived Demyelination from Multimodal MRI using Sketcher-Refiner Adversarial Training for Multiple Sclerosis}, VOLUME = {58}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2019.101546}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Multimodal MRI, PET Imaging, Adversarial Training, Multiple Sclerosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-02276634/file/medima-hal_version.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02276634}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{wei:hal-02042526, AUTHOR = {Wen Wei and Emilie Poirion and Benedetta Bodini and Stanley Durrleman and Olivier Colliot and Bruno Stankoff and Nicholas Ayache}, JOURNAL = {Journal of Medical Imaging}, MONTH = {February}, OPTNOTE = {}, NUMBER = {01}, OPTPAGES = {}, PUBLISHER = {SPIE Digital Library}, TITLE = {Fluid-attenuated inversion recovery MRI synthesis from multisequence MRI using three-dimensional fully convolutional networks for multiple sclerosis}, VOLUME = {6}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1117/1.JMI.6.1.014005}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {MR Images, FLAIR Synthesis, 3D Fully Convolutional Networks, Multiple Sclerosis, Deep Learning}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02042526v2/file/article.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02042526}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{wimmer:hal-02402404, AUTHOR = {Wilhelm Wimmer and Lukas Anschuetz and Stefan Weder and Franca Wagner and Hervé Delingette and Marco Caversaccio}, JOURNAL = {Data in Brief}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {104782}, PUBLISHER = {Elsevier}, TITLE = {Human bony labyrinth dataset: Co-registered CT and micro-CT images, surface models and anatomical landmarks}, VOLUME = {27}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1016/j.dib.2019.104782}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Anatomy, Cochlea, Inner ear, Morphology, Semicircular canals, Vestibule}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02402404}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{zheng:hal-01975880, AUTHOR = {Qiao Zheng and Hervé Delingette and Nicholas Ayache}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {80-95}, PUBLISHER = {Elsevier}, TITLE = {Explainable cardiac pathology classification on cine MRI with motion characterization by semi-supervised learning of apparent flow}, VOLUME = {56}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2019.06.001}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Deep learn- ing, Cine MRI, Classifi-cation, Motion, Semi-supervised learning, Deep learn-ing, Cardiac pathology, Neural network, Apparent flow, Classifi- cation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01975880v2/file/1811.03433.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01975880}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{alessandrini:hal-02059841, AUTHOR = {Martino Alessandrini and Bidisha Chakraborty and Brecht Heyde and Olivier Bernard and de Craene, Mathieu and Maxime Sermesant and Jan d'Hooge}, JOURNAL = {IEEE Transactions on Ultrasonics, Ferroelectrics and Frequency Control}, MONTH = {March}, OPTNOTE = {}, NUMBER = {3}, PAGES = {411-422}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Realistic Vendor-Specific Synthetic Ultrasound Data for Quality Assurance of 2-D Speckle Tracking Echocardiography: Simulation Pipeline and Open Access Database}, VOLUME = {65}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1109/TUFFC.2017.2786300}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02059841}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{almairac:hal-01984498, AUTHOR = {Fabien Almairac and Denys Fontaine and Thomas Demarcy and Hervé Delingette and Stephanie Beuil and Charles Raffaelli}, JOURNAL = {Journal of Neurosurgery}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {1-7}, PUBLISHER = {American Association of Neurological Surgeons}, TITLE = {Motor cortex neurovascular coupling: inputs from ultra--high-frequency ultrasound imaging in humans}, OPTVOLUME = {}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.3171/2018.5.jns18754}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Motor cortex, Ultrasound, Imaging methodology, Clinical neurophysiology, Diagnostic technique, Cerebral blood flow, Neurovascular coupling}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01984498}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{benzaquen:hal-02045478, AUTHOR = {Jonathan Benzaquen and Jacques Boutros and Charles Marquette and Hervé Delingette and Paul Hofman}, JOURNAL = {Cancers}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {MDPI}, TITLE = {Lung Cancer Screening, Towards a Multidimensional Approach: Why and How?}, VOLUME = {10}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {screening, lung cancer, artificial intelligence}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02045478/file/Benzaquen%20et%20al.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02045478}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{bernard:hal-01803621, AUTHOR = {Olivier Bernard and Alain Lalande and Clement Zotti and Frederic Cervenansky and Xin Yang and Pheng-Ann Heng and Irem Cetin and Karim Lekadir and Oscar Camara and Miguel Angel Gonzalez Ballester and Gerard Sanroma and Sandy Napel and Steffen Petersen and Georgios Tziritas and Elias Grinias and Mahendra Khened and Varghese Alex Kollerathu and Ganapathy Krishnamurthi and Marc-Michel Rohé and Xavier Pennec and Maxime Sermesant and Fabian Isensee and Paul Jager and Klaus H Maier-Hein and Peter M. Full and Ivo Wolf and Sandy Engelhardt and Chrisitan Baumgartner and Lisa Koch and Jelmer Wolterink and Ivana Isgum and Yeonggul Jang and Yoonmi Hong and Jay Patravali and Shubham Jain and Olivier Humbert and Pierre-Marc Jodoin}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {May}, OPTNOTE = {}, NUMBER = {11}, PAGES = {2514-2525}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Deep Learning Techniques for Automatic MRI Cardiac Multi-structures Segmentation and Diagnosis: Is the Problem Solved?}, VOLUME = {37}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2018.2837502}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {MRI, Lleft and right ventricles, Cardiac segmentation and diagnosis, Myocardium, Deep learning}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01803621}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{cabreralozoya:hal-01744142, AUTHOR = {Cabrera Lozoya, Rocio and Benjamin Berte and Hubert Cochet and Pierre Jaïs and Nicholas Ayache and Maxime Sermesant}, JOURNAL = {IEEE Transactions on Biomedical Engineering}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {1}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Model-based Feature Augmentation for Cardiac Ablation Target Learning from Images}, OPTVOLUME = {}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1109/TBME.2018.2818300}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {intracardiac electrogram modelling, cardiac elec-, Index Terms-radio-frequency ablation planning, trophysiology modelling, electroanatomical mapping}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01744142/file/TBME2818300.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01744142}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{cedilnik:hal-01875533, AUTHOR = {Nicolas Cedilnik and Josselin Duchateau and Rémi Dubois and Frédéric Sacher and Pierre Jaïs and Hubert Cochet and Maxime Sermesant}, JOURNAL = {EP-Europace}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Oxford University Press (OUP)}, TITLE = {Fast Personalized Electrophysiological Models from CT Images for Ventricular Tachycardia Ablation Planning}, VOLUME = {20}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Computed Tomography, Computational Modelling, Catheter Ablation, Myocardial Infarction, Sudden Cardiac Death, Electrophysiology}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01875533v3/file/europace2018.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01875533}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{corneli:hal-01621757, AUTHOR = {Marco Corneli and Charles Bouveyron and Pierre Latouche and Fabrice Rossi}, JOURNAL = {Statistics and Computing}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Springer Verlag (Germany)}, TITLE = {The dynamic stochastic topic block model for dynamic networks with textual edges}, OPTVOLUME = {}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1007/s11222-018-9832-4}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Dynamic random graph, model based clustering, non homogeneous Poisson process, stochastic block model, topic modeling, latent Dirichlet allocation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01621757/file/Dstbm_paper.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01621757}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{duchateau:hal-01533788, AUTHOR = {Nicolas Duchateau and Maxime Sermesant and Hervé Delingette and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {755-766}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Model-based generation of large databases of cardiac images: synthesis of pathological cine MR sequences from real healthy cases}, VOLUME = {37}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2017.2714343}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {validation, magnetic resonance., biomechanical modeling, Image synthesis and simulation, myocardial infarct, large database for machine learning}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01533788/file/jDuchateau_TMI_2017_FINAL.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01533788}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{feng:hal-01826055, AUTHOR = {Leman Feng and Pierre Alliez and Laurent Busé and Hervé Delingette and Mathieu Desbrun}, JOURNAL = {ACM Transactions on Graphics}, MONTH = {August}, OPTNOTE = {}, NUMBER = {4}, PAGES = {16}, PUBLISHER = {Association for Computing Machinery}, SERIES = {Proceedings of SIGGRAPH 2018}, TITLE = {Curved Optimal Delaunay Triangulation}, VOLUME = {37}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1145/3197517.3201358}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Bézier elements ACM Reference Format:, Mesh generation, Bézier elements, Additional Key Words and Phrases: Higher-order meshing, Optimal Delau-nay Triangulations, CCS Concepts: $\bullet$ Mathematics of computing $\rightarrow$ Mesh generation, higher order finite elements, Optimal Delaunay Triangulations, Higher-order meshing}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01826055/file/CODT-preprint-final.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01826055}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{ferraris:hal-01843151, AUTHOR = {Sebastiano Ferraris and van Der Merwe, Johannes and van Der Veeken, Lennart and Ferran Prados and Juan Eugenio Iglesias and Marco Lorenzi and Andrew Melbourne and Marc M Modat and Willy Gsell and Jan Deprest and Tom Vercauteren}, JOURNAL = {NeuroImage}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {187 - 198}, PUBLISHER = {Elsevier}, TITLE = {A magnetic resonance multi-atlas for the neonatal rabbit brain}, VOLUME = {179}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1016/j.neuroimage.2018.06.029}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01843151/file/hal-01843151.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01843151}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{giffardroisin:hal-01796483, AUTHOR = {Sophie Giffard-Roisin and Hervé Delingette and Thomas Jackson and Jessica Webb and Lauren Fovargue and Jack Lee and Christopher A Rinaldi and Reza Razavi and Nicholas Ayache and Maxime Sermesant}, JOURNAL = {IEEE Transactions on Biomedical Engineering}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Transfer Learning from Simulations on a Reference Anatomy for ECGI in Personalised Cardiac Resynchronization Therapy}, VOLUME = {20}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1109/TBME.2018.2839713}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac Electrophysiology, Inverse Problem of ECG, Personalisation, ECG Imaging, Index Terms-Cardiac Electrophysiology, In- verse Problem of ECG}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01796483v2/file/FINAL_VERSION_CORR.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01796483}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{gori:hal-01709847, AUTHOR = {Pietro Gori and Olivier Colliot and Linda Marrakchi Kacem and Yulia Worbe and Alexandre Routier and Cyril Poupon and Andreas Hartmann and Nicholas Ayache and Stanley Durrleman}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {September}, OPTNOTE = {}, NUMBER = {9}, PAGES = {2033-2043}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Double diffeomorphism: combining morphometry and structural connectivity analysis}, VOLUME = {37}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2018.2813062}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Neural circuits, Structural connectivity, Diffeomorphisms, Multi-object, Atlas, Shape, Morphometry, Complex, Tourette}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01709847v2/file/Double_Diffeo_paper_Review2_Clean%20modified.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01709847}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{karim:hal-01926935, AUTHOR = {Rashed Karim and Lauren-Emma Blake and Jiro Inoue and Qian Tao and Shuman Jia and R. James James Housden and Pranav Bhagirath and Jean-Luc Duval and Marta Varela and Jonathan Behar and Loïc Cadour and van Der Geest, Rob J and Hubert Cochet and Maria Drangova and Maxime Sermesant and Reza Razavi and Oleg Aslanidi and Ronak Rajani and Kawal S. Rhode}, JOURNAL = {Medical Image Analysis}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {36 - 53}, PUBLISHER = {Elsevier}, TITLE = {Algorithms for left atrial wall segmentation and thickness -- Evaluation on an open-source CT and MRI image database}, VOLUME = {50}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2018.08.004}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Myocardium, Left atrial wall thickness, Left atrium, Atrial fibrillation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01926935/file/1-s2.0-S1361841518306431-main.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01926935}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{lorenzi:hal-01756811, AUTHOR = {Marco Lorenzi and Andre Altmann and Boris Gutman and Selina Wray and Charles Arber and Derrek D Hibar and Neda J Jahanshad and Jonathan Schott and Daniel Alexander and Paul M. Thompson and Sébastien Ourselin}, JOURNAL = {Proceedings of the National Academy of Sciences of the United States of America}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {12}, PAGES = {3162-3167}, PUBLISHER = {National Academy of Sciences}, TITLE = {Susceptibility of brain atrophy to TRIB3 in Alzheimer's disease, evidence from functional prioritization in imaging genetics}, VOLUME = {115}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1073/pnas.1706100115}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {bioinformatics, phenotype, imaging-genetics, Alzheimer's disease, genotype, GWA}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01756811/file/Brain_genes-UCL_USC-review_V3.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01756811}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{mcleod:hal-01736454, AUTHOR = {Kristin Mcleod and Kristin Tondel and Lilian Calvet and M Sermesant and Xavier Pennec}, JOURNAL = {IEEE Transactions on Biomedical Engineering}, MONTH = {December}, OPTNOTE = {}, NUMBER = {12}, PAGES = {2769 - 2780}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Cardiac Motion Evolution Model for Analysis of Functional Changes Using Tensor Decomposition and Cross-Sectional Data}, VOLUME = {65}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1109/TBME.2018.2816519}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tensor decomposition, evolution modelling, Cardiac motion tracking, non-rigid image registration, spatio-temporal alignment, N-way PLS, atlas, population statistics, Tetralogy of Fallot}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01736454/file/TBME2816519.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01736454}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{miolane:hal-01655366, AUTHOR = {Nina Miolane and Susan Holmes and Xavier Pennec}, JOURNAL = {SIAM Journal on Applied Algebra and Geometry}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, PAGES = {348-375}, PUBLISHER = {Society for Industrial and Applied Mathematics}, TITLE = {Topologically constrained template estimation via Morse-Smale complexes controls its statistical consistency}, VOLUME = {2}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1137/17M1129222}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01655366/file/siaga_article.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01655366}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{moceri:hal-01533793, AUTHOR = {Pamela Moceri and Nicolas Duchateau and Delphine Baudouy and Elie-Dan Schouver and Sylvie Leroy and Fabien Squara and Emile Ferrari and Maxime Sermesant}, JOURNAL = {European Heart Journal - Cardiovascular Imaging}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {450-458}, PUBLISHER = {Oxford UP}, TITLE = {Three-dimensional right-ventricular regional deformation and survival in pulmonary hypertension}, VOLUME = {19}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1093/ehjci/jex163}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {pulmonary hypertension, speckle-tracking imaging, three-dimensional echocardiography}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01533793/file/jMoceri_EHJCI_2017_FINAL.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01533793}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{moceri:hal-01926967, AUTHOR = {Pamela Moceri and Maxime Sermesant and Delphine Baudouy and Emile Ferrari and Nicolas Duchateau}, JOURNAL = {Canadian Journal of Cardiology}, MONTH = {October}, OPTNOTE = {}, NUMBER = {10}, PAGES = {1369.e9 - 1369.e11}, PUBLISHER = {Elsevier}, TITLE = {Right Ventricular Function Evolution With Pregnancy in Repaired Tetralogy of Fallot}, VOLUME = {34}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1016/j.cjca.2018.06.010}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Pregnancy, Echocardiography, Right Ventricular Function, 3D speckle-tracking imaging, Key-words: Tetralogy of Fallot}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01926967/file/jMoceri_CJC_2018_FINALok.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01926967}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{nioche:hal-01938545, AUTHOR = {Christophe Nioche and Fanny Orlhac and Sarah Boughdad and Sylvain Reuzé and Jessica Goya-Outi and Charlotte Robert and Claire Pellot-Barakat and Michael Soussan and Frédérique Frouin and Irene Buvat}, JOURNAL = {Cancer Research}, MONTH = {August}, OPTNOTE = {}, NUMBER = {16}, PAGES = {4786 - 4789}, PUBLISHER = {American Association for Cancer Research}, TITLE = {LIFEx: A Freeware for Radiomic Feature Calculation in Multimodality Imaging to Accelerate Advances in the Characterization of Tumor Heterogeneity}, VOLUME = {78}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1158/0008-5472.CAN-18-0125}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01938545}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{orlhac:hal-01953538, AUTHOR = {Fanny Orlhac and Frédérique Frouin and Christophe Nioche and Nicholas Ayache and Irene Buvat}, JOURNAL = {Radiology}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Radiological Society of North America}, TITLE = {Validation of a method to compensate multicenter effects affecting CT radiomic features}, OPTVOLUME = {}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01953538/file/Version_HAL.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01953538}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{orlhac:hal-01811514, AUTHOR = {F Orlhac and P.-A Mattei and C. Bouveyron and N Ayache}, JOURNAL = {Journal of Chemometrics}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {e3097}, PUBLISHER = {Wiley}, TITLE = {Class-specific Variable Selection in High-Dimensional Discriminant Analysis through Bayesian Sparsity}, OPTVOLUME = {}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1002/cem.3097}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01811514/file/sparseHDDA_v1.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01811514}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{pennec:hal-01343881, AUTHOR = {Xavier Pennec}, JOURNAL = {Annals of Statistics}, MONTH = {July}, OPTNOTE = {}, NUMBER = {6A}, PAGES = {2711-2746}, PUBLISHER = {Institute of Mathematical Statistics}, TITLE = {Barycentric Subspace Analysis on Manifolds}, VOLUME = {46}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1214/17-AOS1636}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Manifold, Flag of subspaces, Frechet mean, Barycenter, Subspaces, Pricipal Component Analysis}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01343881v2/file/AOS1636-WithSupplements.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01343881}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{rohe:hal-01677685, AUTHOR = {Marc-Michel Rohé and Maxime Sermesant and Xavier Pennec}, JOURNAL = {Medical Image Analysis}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {1-12}, PUBLISHER = {Elsevier}, TITLE = {Low-Dimensional Representation of Cardiac Motion Using Barycentric Subspaces: a New Group-Wise Paradigm for Estimation, Analysis, and Reconstruction}, VOLUME = {45}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2017.12.008}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac motion, Low-dimensional analysis, Registration, Image synthesis}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01677685/file/barycentric_article.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01677685}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{sanchezmartinez:hal-02282401, AUTHOR = {Sergio Sanchez-Martinez and Nicolas Duchateau and Tamas Erdei and Gabor Kunszt and Svend Aakhus and Anna Degiovanni and Paolo Marino and Erberto Carluccio and Gemma Piella and Alan Fraser and Bart Bijnens}, JOURNAL = {Circulation: Cardiovascular Imaging}, MONTH = {April}, OPTNOTE = {}, NUMBER = {4}, OPTPAGES = {}, PUBLISHER = {American Heart Association}, TITLE = {Machine learning analysis of left ventricular function to characterize heart failure with preserved ejection fraction}, VOLUME = {11}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1161/CIRCIMAGING.117.007138}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Excercise echocardiography, Heart failure with preservec ejection fraction, Myocardial velocity, Machine learning, Non-invasive diagnostic heart failure}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-02282401/file/jsanchez_circim_2018_finalok.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02282401}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{scelzi:hal-01843380, AUTHOR = {Marzia A Scelzi and Raiyan R Khan and Marco Lorenzi and Christopher Leigh and Michael D Greicius and Jonathan M. Schott and Sébastien Ourselin and Andre Altmann}, JOURNAL = {Brain - A Journal of Neurology}, MONTH = {July}, OPTNOTE = {}, NUMBER = {7}, PAGES = {2167 - 2180}, PUBLISHER = {Oxford University Press}, TITLE = {Genetic study of multimodal imaging Alzheimer's disease progression score implicates novel loci}, VOLUME = {141}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1093/brain/awy141}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01843380/file/awy141.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01843380}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{suinesiaputra:hal-01533805, AUTHOR = {Avan A Suinesiaputra and Pierre A Ablin and Xènia A Albà and Martino Alessandrini and Jack A Allen and Wenjia Bai and Serkan Cimen and Peter Claes and Brett R Cowan and Jan d'Hooge and Nicolas Duchateau and Jan Ehrhardt and Alejandro F. Frangi and Ali A Gooya and Vicente Grau and Karim Lekadir and Allen A Lu and Anirban A Mukhopadhyay and Ilkay Oksuz and Nripesh Parajuli and Xavier Pennec and Marco Pereañez and Catarina Pinto and Paolo Piras and Marc-Michel Rohé and Daniel R Rueckert and Dennis Säring and Maxime Sermesant and Kaleem Siddiqi and Mahdi Tabassian and Luciano Teresi and Sotirios A Tsaftaris and Matthias Wilms and Alistair A Young and Xingyu Zhang and Pau Medrano-Gracia}, JOURNAL = {IEEE Journal of Biomedical and Health Informatics}, MONTH = {March}, OPTNOTE = {}, NUMBER = {3}, PAGES = {503-515}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Statistical shape modeling of the left ventricle: myocardial infarct classification challenge}, VOLUME = {22}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1109/JBHI.2017.2652449}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {statistical shape analysis, classification, myocardial infarct, Cardiac modeling}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01533805/file/jSuinesiaputra_JBHI_2017_FINAL.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01533805}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{zheng:hal-01753086, AUTHOR = {Qiao Zheng and Hervé Delingette and Nicolas Duchateau and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {2137-2148}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {3D Consistent & Robust Segmentation of Cardiac Images by Deep Learning with Spatial Propagation}, VOLUME = {37}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {deep learning, spatial propagation, Cardiac segmentation, 3D consistency, neural network}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01753086/file/FINAL%20VERSION.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01753086}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{zhou:hal-01533366, AUTHOR = {Yitian Zhou and Sophie Giffard-Roisin and de Craene, Mathieu and Sorina Camarasu-Pop and Jan d'Hooge and Martino Alessandrini and Denis Friboulet and Maxime Sermesant and Olivier Bernard}, JOURNAL = {IEEE Transactions on Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {3}, PAGES = {741-754}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {A Framework for the Generation of Realistic Synthetic Cardiac Ultrasound and Magnetic Resonance Imaging Sequences from the same Virtual Patients}, VOLUME = {37}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2017.2708159}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {cardiac strain, Multimodal cardiac imaging, synthetic sequences, electromechanical model, motion estimation, numerical simulation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01533366/file/TMI2708159.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01533366}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{ayache:hal-01882558, OPTADDRESS = {}, AUTHOR = {Nicholas Ayache}, BOOKTITLE = {Santé et intelligence artificielle}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Cédric Villani and Bernard Nordlinger}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {151-154}, PUBLISHER = {CNRS Editions}, OPTSERIES = {}, TITLE = {L'imagerie médicale à l'heure de l'intelligence artificielle}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01882558/file/Ayache-Livre-IA-Sante%CC%81-Imagerie-vf.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01882558}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{bouveyron:hal-01884468, OPTADDRESS = {}, AUTHOR = {Charles Bouveyron}, BOOKTITLE = {Santé et intelligence artificielle}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Cédric Villani and Bernard Nordlinger}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {179-189}, PUBLISHER = {CNRS Editions}, OPTSERIES = {}, TITLE = {Apprentissage statistique en grande dimension et application au diagnostic oncologique par radiomique}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01884468/file/Article-ANM.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01884468}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{bruse:hal-01880221, AUTHOR = {Jan L. Bruse and Elena Cervi and Kristin Mcleod and Giovanni Biglino and Maxime Sermesant and Xavier Pennec and Andrew Taylor and Silvia Schievano and Tain-Yen Hsia}, JOURNAL = {Annals of Thoracic Surgery}, MONTH = {February}, OPTNOTE = {}, NUMBER = {2}, PAGES = {645 - 654}, PUBLISHER = {Elsevier}, TITLE = {Looks Do Matter! Aortic Arch Shape After Hypoplastic Left Heart Syndrome Palliation Correlates With Cavopulmonary Outcomes}, VOLUME = {103}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1016/j.athoracsur.2016.06.041}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01880221}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{bruse:hal-01387297, AUTHOR = {Jan L. Bruse and Abbas Khushnood and Kristin Mcleod and Giovanni Biglino and Maxime Sermesant and Xavier Pennec and Andrew M. Taylor and Tain-Yen Hsia and Silvia Schievano}, JOURNAL = {Journal of Thoracic and Cardiovascular Surgery}, MONTH = {February}, OPTNOTE = {}, NUMBER = {2}, PAGES = {418 - 427}, PUBLISHER = {Elsevier}, TITLE = {How successful is successful? Aortic arch shape after successful aortic coarctation repair correlates with left ventricular function}, VOLUME = {153}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1016/j.jtcvs.2016.09.018}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01387297}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{bruse:hal-01421202, AUTHOR = {Jan L. Bruse and Maria A. Zuluaga and Abbas Khushnood and Kristin Mcleod and Hopewell N. Ntsinjana and Tain-Yen Hsia and Maxime Sermesant and Xavier Pennec and Andrew M. Taylor and Silvia Schievano}, JOURNAL = {IEEE Transactions on Biomedical Engineering}, MONTH = {February}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {1 - 13}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Detecting clinically meaningful shape clusters in medical image data: metrics analysis for hierarchical clustering applied to healthy and pathological aortic arches}, OPTVOLUME = {}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1109/TBME.2017.2655364}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01421202v2/file/07857751.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01421202}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{demarcy:hal-01528489, AUTHOR = {Thomas Demarcy and Clair Vandersteen and Nicolas Guevara and Charles Raffaelli and Dan Gnansia and Nicholas Ayache and Hervé Delingette}, JOURNAL = {Computerized Medical Imaging and Graphics}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {July 2017}, PAGES = {1 - 12}, PUBLISHER = {Elsevier}, TITLE = {Automated analysis of human cochlea shape variability from segmented $\mu$CT images}, VOLUME = {59}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1016/j.compmedimag.2017.04.002}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {cochlear implant, human cochlea, anatomy, shape variability, modiolar axis}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01528489/file/DemarcyCMIG_1503.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01528489}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{devilliers:hal-01543616, AUTHOR = {Loïc Devilliers and Stéphanie Allassonnière and Alain Trouvé and Xavier Pennec}, JOURNAL = {Entropy}, MONTH = {June}, OPTNOTE = {}, NUMBER = {6}, PAGES = {article 288}, PUBLISHER = {MDPI}, TITLE = {Inconsistency of template estimation by minimizing of the variance/pre-variance in the quotient space}, VOLUME = {19}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.3390/e19060288}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {quotient space, Fréchet mean, Hilbert space, deformable model, regularization, template estimation, inconsistency}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01543616/file/entropyHal.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01543616}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{devilliers:hal-01352707, AUTHOR = {Loïc Devilliers and Stéphanie Allassonnière and Alain Trouvé and Xavier Pennec}, JOURNAL = {SIAM Journal on Imaging Sciences}, MONTH = {August}, OPTNOTE = {}, NUMBER = {3}, PAGES = {1139-1169}, PUBLISHER = {Society for Industrial and Applied Mathematics}, TITLE = {Template estimation in computational anatomy: Fréchet means in top and quotient spaces are not consistent}, VOLUME = {10}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1137/16M1083931}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Fréchet mean, Hilbert space, quotient space, Template, manifold, empirical Fréchet mean, inconsistency, group action, consistency bias}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01352707v4/file/InconsistencySIIMSDevilliers.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01352707}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{giffardroisin:hal-01397393, AUTHOR = {Sophie Giffard-Roisin and Thomas Jackson and Lauren Fovargue and Jack Lee and Hervé Delingette and Reza Razavi and Nicholas Ayache and Maxime Sermesant}, JOURNAL = {IEEE Transactions on Biomedical Engineering}, MONTH = {September}, NOTE = {Selected for the TBME highlights, sept. 2017rlhttps://tbme.embs.org/2017/08/24/non-invasive-personalisation-cardiac-electrophysiology-model-body-surface-potential-mapping/}, NUMBER = {9}, PAGES = {2206 - 2218}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, SERIES = {IEEE Transactions on Biomedical Engineering}, TITLE = {Non-Invasive Personalisation of a Cardiac Electrophysiology Model from Body Surface Potential Mapping}, VOLUME = {64}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1109/TBME.2016.2629849}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {ECG Imaging, Parameter estimation, In- verse Problem of ECG, Cardiac Electrophysiology, Personalisation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01397393/file/TBME_acceptedversion.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01397393}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{gori:hal-01359423, AUTHOR = {Pietro Gori and Olivier Colliot and Linda Marrakchi-Kacem and Yulia Worbe and Cyril Poupon and Andreas Hartmann and Nicholas Ayache and Stanley Durrleman}, JOURNAL = {Medical Image Analysis}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {458-474}, PUBLISHER = {Elsevier}, TITLE = {A Bayesian Framework for Joint Morphometry of Surface and Curve meshes in Multi-Object Complexes}, VOLUME = {35}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2016.08.011}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {complex, fiber bundle, morphometry, shape, Bayesian, varifolds, atlas, multi - object}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01359423/file/Articolo_Bayesian_LAST.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01359423}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{khanal:hal-01348959, AUTHOR = {Bishesh Khanal and Nicholas Ayache and Xavier Pennec}, JOURNAL = {Frontiers in Neuroscience}, MONTH = {February}, OPTNOTE = {}, NUMBER = {Article 132}, PAGES = {18}, PUBLISHER = {Frontiers}, TITLE = {Simulating Longitudinal Brain MRIs with known Volume Changes and Realistic Variations in Image Intensity}, VOLUME = {11}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.3389/fnins.2017.00132}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {simulated database, biomechanical simulation, Neurodegeneration, biophysical modelling, synthetic images, synthetic}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01348959v3/file/fnins-11-00132.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01348959}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{lefolgoc:hal-01149544, AUTHOR = {Le Folgoc, Loïc and Hervé Delingette and Antonio Criminisi and Nicholas Ayache}, JOURNAL = {Medical Image Analysis}, MONTH = {February}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {79 - 97}, PUBLISHER = {Elsevier}, TITLE = {Sparse Bayesian registration of medical images for self-tuning of parameters and spatially adaptive parametrization of displacements}, VOLUME = {36}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2016.09.008}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac Imaging, Automatic Relevance Determination, Bayesian modelling, Sparse, Registration}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01149544v2/file/lefolgoc2016MedIA-accepted-HAL-version.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01149544}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{lorenzi:hal-01617750, AUTHOR = {Marco Lorenzi and Maurizio Filippone and Giovanni Frisoni and Daniel C Alexander and Sébastien Ourselin}, JOURNAL = {NeuroImage}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Elsevier}, TITLE = {Probabilistic disease progression modeling to characterize diagnostic uncertainty: application to staging and prediction in Alzheimer's disease}, OPTVOLUME = {}, YEAR = {2017}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01617750/file/time_series_journal.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01617750}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{mendelson:hal-01843390, AUTHOR = {Alex F. Mendelson and Maria A. Zuluaga and Marco Lorenzi and Brian F. Hutton and Sébastien Ourselin}, JOURNAL = {Neuroimage-Clinical}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {400 - 416}, PUBLISHER = {Elsevier}, TITLE = {Selection bias in the reported performances of AD classification pipelines}, VOLUME = {14}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1016/j.nicl.2016.12.018}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Alzheimer's disease, Classification, Cross validation, Selection bias, Overfitting, ADNI}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01843390/file/1-s2.0-S221315821630256X-main.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01843390}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{miolane:hal-01503822, AUTHOR = {Nina Miolane}, JOURNAL = {Interstices}, MONTH = {February}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {INRIA}, TITLE = {Les maths de l'espace-temps qui décrivent et dépassent le cerveau}, OPTVOLUME = {}, YEAR = {2017}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {anatomie cérébrale, anatomie numérique, modélisation mathématique, géométrie riemannienne, cortex visuel, neuroimagerie, image 3D, perception visuelle}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01503822}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{miolane:hal-01350508, AUTHOR = {Nina Miolane and Susan Holmes and Xavier Pennec}, JOURNAL = {SIAM Journal on Imaging Sciences}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, PAGES = {808 - 844}, PUBLISHER = {Society for Industrial and Applied Mathematics}, TITLE = {Template Shape Estimation: Correcting an Asymptotic Bias}, VOLUME = {10}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1137/16M1084493}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {geometry, quotient space, manifold, template, bias, shape, consistency}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01350508v2/file/siims_article_black.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01350508}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{mollero:hal-01656008, AUTHOR = {Roch Molléro and Xavier Pennec and Hervé Delingette and Alan Garny and Nicholas Ayache and Maxime Sermesant}, JOURNAL = {Biomechanics and Modeling in Mechanobiology}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {1-16}, PUBLISHER = {Springer Verlag}, TITLE = {Multifidelity-CMA: a multifidelity approach for efficient personalisation of 3D cardiac electromechanical models}, OPTVOLUME = {}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1007/s10237-017-0960-0}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Finite Element Mechanical modeling, Parameter Estimation, Reduced Model, Cardiac Electromechanical Modeling, Multi-fidelity Modeling}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01656008/file/BMMB_Paper___Multifidelity_CMA___Camera_Ready.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01656008}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{rodriguezflorez:hal-01540631, AUTHOR = {Naiara Rodriguez-Florez and Jan L. Bruse and Alessandro Borghi and Herman Vercruysse and Juling Ong and Greg James and Xavier Pennec and David J. Dunaway and Owase Jeelani and Silvia Schievano}, JOURNAL = {International Journal of Computer Assisted Radiology and Surgery}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {1-11}, PUBLISHER = {Springer Verlag}, TITLE = {Statistical shape modelling to aid surgical planning: associations between surgical parameters and head shapes following spring-assisted cranioplasty}, OPTVOLUME = {}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1007/s11548-017-1614-5}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01540631/file/Rodriguez-Florez_et_al-2017-International_Journal_of_Computer_Assisted_Radiology_and_Surgery.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01540631}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{sanchezmartinez:hal-01331550, AUTHOR = {Sergio Sanchez-Martinez and Nicolas Duchateau and Tamas Erdei and Alan Fraser and Bart Bijnens and Gemma Piella}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {70--82}, PUBLISHER = {Elsevier}, TITLE = {Characterization of myocardial motion patterns by unsupervised multiple kernel learning}, VOLUME = {35}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2016.06.007}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {echocardiography, pattern analysis, multiple kernel learning, Myocardial motion}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01331550/file/jsanchezmartinez_media_2016_finalok.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01331550}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{schulze:hal-01598299, AUTHOR = {Walther Schulze and Zhong Chen and Jatin Relan and Danila Potyagaylo and Martin W. Krueger and Rashed Karim and Manav Sohal and Anoop Shetty and Yingliang Ma and Nicholas Ayache and Maxime Sermesant and Hervé Delingette and Julian Bostock and Reza Razavi and Kawal S. Rhode and Christopher A. Rinaldi}, JOURNAL = {Medical and Biological Engineering and Computing}, MONTH = {June}, OPTNOTE = {}, NUMBER = {6}, PAGES = {979 - 990}, PUBLISHER = {Springer Verlag}, TITLE = {ECG imaging of ventricular tachycardia: evaluation against simultaneous non-contact mapping and CMR-derived grey zone}, VOLUME = {55}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1007/s11517-016-1566-x}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Clinical validation, Non-contact mapping, ECG imaging, Ventricular tachycardia, Inverse problem of ECG}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01598299/file/10.1007-s11517-016-1566-x.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01598299}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{sotoiglesias:hal-01398828, AUTHOR = {David Soto-Iglesias and Nicolas Duchateau and Constantine Butakoff and David Andreu and Juan Fernández-Armenta and Bart Bijnens and Antonio Berruezo and Marta Sitges and Oscar Camara}, JOURNAL = {IEEE Journal of Translational Engineering in Health and Medicine}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {1900215}, PUBLISHER = {IEEE}, TITLE = {Quantitative analysis of electro-anatomical maps: application to an experimental model of LBBB/CRT}, VOLUME = {5}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1109/JTEHM.2016.2634006}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {electro - anatomical mapping system, quantitative pattern analysis, left bundle branch block, subject - specific 2D and 3D data representation, Cardiac resynchronization therapy, lead placement}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01398828/file/jSoto_JTEHM_2017_FINAL.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01398828}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{tian:hal-01975531, AUTHOR = {Zhiyu Tian and Chenyang Xu}, JOURNAL = {Compositio Mathematica}, MONTH = {February}, OPTNOTE = {}, NUMBER = {02}, PAGES = {257-273}, PUBLISHER = {Foundation Compositio Mathematica}, TITLE = {Finiteness of fundamental groups}, VOLUME = {153}, YEAR = {2017}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01975531}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{marchesseau:hal-01536406, OPTADDRESS = {}, AUTHOR = {Stéphanie Marchesseau and Simon Chatelin and Hervé Delingette}, BOOKTITLE = {Biomechanics of Living Organs}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Yohan Payan and Jacques Ohayon}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {602}, PUBLISHER = {Elsevier}, OPTSERIES = {}, TITLE = {Non linear Biomechanical Model of the Liver}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2017}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Liver, Biomechanics, Rheology, Finite element method}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01536406/file/LiverHyperElasticity.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01536406}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{marchesseau:hal-03040194, OPTADDRESS = {}, AUTHOR = {Stéphanie Marchesseau and Simon Chatelin and Hervé Delingette}, BOOKTITLE = {Biomechanics of Living Organs. Hyperelastic Constitutive Laws for Finite Element Modeling}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Yohan Payan and Jacques Ohayon}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {243 - 265}, PUBLISHER = {Elsevier}, OPTSERIES = {}, TITLE = {Nonlinear Biomechanical Model of the Liver}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1016/b978-0-12-804009-6.00011-0}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03040194/file/LiverHyperElasticity%20Submitted.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03040194}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{alessandrini:hal-01373083, AUTHOR = {Martino Alessandrini and Brecht Heyde and Sandro Queirós and Szymon Cygan and Maria Zontak and Oudom Somphone and Olivier Bernard and Maxime Sermesant and Hervé Delingette and Daniel Barbosa and de Craene, Mathieu and Matthew O'Donnell and Jan d'Hooge}, JOURNAL = {IEEE Transactions on Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {8}, PAGES = {1915-1926}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Detailed Evaluation of Five 3D Speckle Tracking Algorithms Using Synthetic Echocardiographic Recordings}, VOLUME = {35}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2016.2537848}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01373083/file/main.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01373083}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{audigier:hal-01423321, AUTHOR = {Chloé Audigier and Tommaso Mansi and Hervé Delingette and Saikiran Rapaka and Tiziano Passerini and Viorel Mihalef and Marie-Pierre Jolly and Raoul Pop and Michele Diana and Luc Soler and Ali Kamen and Dorin Comaniciu and Nicholas Ayache}, JOURNAL = {International Journal of Computer Assisted Radiology and Surgery}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Springer Verlag}, TITLE = {Comprehensive Pre-Clinical Evaluation of a Multi-physics Model of Liver Tumor Radiofrequency Ablation}, OPTVOLUME = {}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1007/s11548-016-1517-x}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01423321/file/IJCARS_Audigier_2016.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01423321}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{ayache:hal-01320985, AUTHOR = {Nicholas Ayache}, JOURNAL = {IMIA Yearbook of Medical Informatics}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {Suppl. 1}, PAGES = {S8-S9}, PUBLISHER = {Schattauer}, TITLE = {Medical Imaging Informatics: Towards a Personalized Computational Patient}, VOLUME = {25}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.15265/IYS-2016-s002}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01320985/file/Ayache-IMIA-Yearbook-2016-v6-preprint.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01320985}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{ayache:hal-01353697, AUTHOR = {Nicholas Ayache and James Duncan}, JOURNAL = {Medical Image Analysis}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {1-3}, PUBLISHER = {Elsevier}, TITLE = {20th anniversary of the medical image analysis journal (MedIA)}, VOLUME = {33}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2016.07.004}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01353697/file/Edito_Ayache.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01353697}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{bruse:hal-01335147, AUTHOR = {Jan L. Bruse and Kristin Mcleod and Giovanni Biglino and Hopewell N. Ntsinjana and Claudio Capelli and Tain-Yen Hsia and Maxime Sermesant and Xavier Pennec and Andrew M. Taylor and Silvia Schievano}, JOURNAL = {BMC Medical Imaging}, MONTH = {May}, OPTNOTE = {}, NUMBER = {1}, OPTPAGES = {}, PUBLISHER = {BioMed Central}, TITLE = {A statistical shape modelling framework to extract 3D shape biomarkers from medical imaging data: assessing arch morphology of repaired coarctation of the aorta}, VOLUME = {16}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1186/s12880-016-0142-z}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01335147/file/art3A10_1186_s12880-016-0142.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01335147}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{bruse:hal-03063907, AUTHOR = {Jan Bruse and Hopewell Ntsinjana and Claudio Capelli and Giovanni Biglino and Kristin Mcleod and Maxime Sermesant and Xavier Pennec and Tain-Yen Hsia and Silvia Schievano and Andrew Taylor}, JOURNAL = {Journal of Cardiovascular Magnetic Resonance}, MONTH = {December}, OPTNOTE = {}, NUMBER = {S1}, OPTPAGES = {}, PUBLISHER = {BioMed Central}, TITLE = {CMR-based 3D statistical shape modelling reveals left ventricular morphological differences between healthy controls and arterial switch operation survivors}, VOLUME = {18}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1186/1532-429X-18-S1-Q2}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03063907}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{cabreralozoya:hal-01313615, AUTHOR = {Rocìo Cabrera-Lozoya and Benjamin Berte and Hubert Cochet and Pierre Jaïs and Nicholas Ayache and Maxime Sermesant}, JOURNAL = {IEEE Transactions on Biomedical Engineering}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {99}, OPTPAGES = {}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Image-based Biophysical Simulation of Intracardiac Abnormal Ventricular Electrograms}, VOLUME = {PP}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1109/TBME.2016.2562918}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {electroanatomical mapping, intracar-diac electrogram modelling, radiofrequency ablation planning, cardiac electrophysiology modelling}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01313615/file/HALfile.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01313615}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{chabiniok:hal-01277684, AUTHOR = {Radomir Chabiniok and Vicky Y. Wang and Myrianthi Hadjicharalambous and Liya Asner and Jack Lee and Maxime Sermesant and Ellen Kuhl and Alistair A. Young and Philippe Moireau and Martyn P. Nash and Dominique Chapelle and David Nordsletten}, JOURNAL = {Interface Focus}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, OPTPAGES = {}, PUBLISHER = {Royal Society publishing}, TITLE = {Multiphysics and multiscale modelling, data-model fusion and integration of organ physiology in the clinic: ventricular cardiac mechanics}, VOLUME = {6}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1098/rsfs.2015.0083}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {translational cardiac modelling, patient-specific modelling, heart mechanics, cardiac mechanics, data-model fusion}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01277684/file/20150083.full.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01277684}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{chen:hal-01301426, AUTHOR = {Zhong Chen and Rocìo Cabrera-Lozoya and Jatin Relan and Manav Sohal and Anoop Shetty and Rashed Karim and Hervé Delingette and Jaswinder Gill and Kawal Rhode and Nicholas Ayache and Peter Taggart and Christopher Aldo Rinaldi and Maxime Sermesant and Reza Razavi}, JOURNAL = {Journal of Cardiovascular Electrophysiology}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {7}, PAGES = {851-860}, PUBLISHER = {Wiley}, TITLE = {Biophysical modelling predicts ventricular tachycardia inducibility and circuit morphology: A combined clinical validation and computer modelling approach}, VOLUME = {27}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1111/jce.12991}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {cardiac magnetic resonance imaging, conductivity, APD restitution, computer modelling, Ventricular tachycardia}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01301426/file/Biophysical%20modelling%20to%20predict%20VT%20Manuscript%20JCE%20Revised%20%2010042016.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01301426}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{cordier:hal-01343233, AUTHOR = {Nicolas Cordier and Hervé Delingette and Matthieu Lê and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {July}, OPTNOTE = {}, NUMBER = {99}, OPTPAGES = {}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Extended Modality Propagation: Image Synthesis of Pathological Cases}, VOLUME = {PP}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2016.2589760}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {patch-based, multi-atlas, glioma, generative model, medical image simulation, modality synthesis}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01343233/file/Cordier-TMI-2016-preprint.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01343233}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{duchateau:hal-01314767, AUTHOR = {Nicolas Duchateau and de Craene, Mathieu and Pascal Allain and Eric Saloux and Maxime Sermesant}, JOURNAL = {IEEE Transactions on Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {10}, PAGES = {2340-2352}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Infarct localization from myocardial deformation: Prediction and uncertainty quantification by regression from a low-dimensional space}, VOLUME = {35}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2016.2562181}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {biomechanical modeling, delayed-enhancement, pattern recognition & classification, Index Terms-Myocardial infarct, dimensionality reduction, computer-aided diagnosis, ultrasound}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01314767/file/jDuchateau_TMI_2016_FINALok1.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01314767}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{gnansia:hal-01326507, AUTHOR = {Dan Gnansia and Thomas Demarcy and Clair Vandersteen and Charles Raffaelli and Nicolas Guevara and Hervé Delingette and Nicholas Ayache}, JOURNAL = {European Annals of Otorhinolaryngology, Head and Neck Diseases}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {S66-S67}, PUBLISHER = {Elsevier Masson}, TITLE = {Optimal electrode diameter in relation to volume of the cochlea}, VOLUME = {133, Supplement 1}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1016/j.anorl.2016.04.013}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cochlear implant, Electrode-array, Hearing preservation, Soft surgery, Electrode-array design, Image processing, Computed tomography, Inner ear, Anatomy}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01326507/file/ANORL.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01326507}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{gori:hal-01346067, AUTHOR = {Pietro Gori and Olivier Colliot and Linda Marrakchi-Kacem and Yulia Worbe and de Vico Fallani, Fabrizio and Mario Chavez and Cyril Poupon and Andreas Hartmann and Nicholas Ayache and Stanley Durrleman}, JOURNAL = {IEEE Transactions on Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {99}, OPTPAGES = {}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Parsimonious Approximation of Streamline Trajectories in White Matter Fiber Bundles}, VOLUME = {PP}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2016.2591080}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Index Terms-Diffusion weighted imaging, Brain, Connectivity analysis, Dimensionality reduction, Registration, Tractography, Visualization}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01346067/file/Prototype_Paper_Final_PrePrint.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01346067}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{hadjhamou:hal-01329989, AUTHOR = {Mehdi Hadj-Hamou and Marco Lorenzi and Nicholas Ayache and Xavier Pennec}, JOURNAL = {Frontiers in Neuroscience}, MONTH = {June}, OPTNOTE = {}, NUMBER = {236}, PAGES = {18}, PUBLISHER = {Frontiers}, TITLE = {Longitudinal Analysis of Image Time Series with Diffeomorphic Deformations: A Computational Framework Based on Stationary Velocity Fields}, VOLUME = {10}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.3389/fnins.2016.00236}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {non-linear registration, deformation-based morphometry, longitudinal study, diffeomorphism parametrized by stationary velocity fields, statistical analysis, reproducible research}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01329989/file/fnins-10-00236.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01329989}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{khanal:hal-01305755, AUTHOR = {Bishesh Khanal and Marco Lorenzi and Nicholas Ayache and Xavier Pennec}, JOURNAL = {NeuroImage}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {35-52}, PUBLISHER = {Elsevier}, TITLE = {A biophysical model of brain deformation to simulate and analyze longitudinal MRIs of patients with Alzheimer's disease}, VOLUME = {134}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1016/j.neuroimage.2016.03.061}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {longitudinal modeling, simulation of atrophy, longitudinal MRIs simulation, biophysical model, Alzheimer's disease}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01305755/file/Khanal_2016_NeuroImage_acceptedVersionPreprint.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01305755}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{lefolgoc:hal-01378844, AUTHOR = {Le Folgoc, Loïc and Hervé Delingette and Antonio Criminisi and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {December}, OPTNOTE = {}, NUMBER = {99}, OPTPAGES = {}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Quantifying Registration Uncertainty with Sparse Bayesian Modelling}, VOLUME = {PP}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2016.2623608}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {MCMC, Uncertainty Quantification, Registration, Sparse Bayesian Learning, Reversible Jump, Automatic Relevance Determination}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01378844/file/lefolgoc2016quantifying-HAL-manuscript.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01378844}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{le:hal-01324849, AUTHOR = {Matthieu Lê and Hervé Delingette and Jayashree Kalpathy-Cramer and Elizabeth R Gerstner and Tracy Batchelor and Jan Unkelbach and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {April}, OPTNOTE = {}, NUMBER = {10}, PAGES = {2329-2339}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {MRI Based Bayesian Personalization of a Tumor Growth Model}, VOLUME = {35}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2016.2561098}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {bayesian, personalization, Index Terms-tumor growth, glioblastoma, reaction-diffusion, LBM, Monte Carlo}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01324849/file/preprint.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01324849}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{le:hal-01403847, AUTHOR = {Matthieu Lê and Hervé Delingette and Jayashree Kalpathy-Cramer and Elizabeth R Gerstner and Tracy Batchelor and Jan Unkelbach and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {11}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Personalized Radiotherapy Planning Based on a Computational Tumor Growth Model}, OPTVOLUME = {}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2016.2626443}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Index Terms-Radiotherapy planning, computational tu-, mor growth model, personalization, uncertainty, segmentation, glioblastoma}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01403847/file/FINAL%20VERSION.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01403847}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{le:hal-01304646, AUTHOR = {Matthieu Lê and Jan Unkelbach and Nicholas Ayache and Hervé Delingette}, JOURNAL = {Medical Image Analysis}, MONTH = {December}, NOTE = {Accepted for publication to the journal Elsevier Medical Image Analysis}, OPTNUMBER = {}, PAGES = {42-51}, PUBLISHER = {Elsevier}, TITLE = {Sampling Image Segmentations for Uncertainty Quantification}, VOLUME = {34}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2016.04.005}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Gaussian process, brain tumor, uncertainty, radiotherapy planning, Segmentation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01304646/file/mle_preprint.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01304646}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{mangado:hal-01314765, AUTHOR = {Nerea Mangado and Mario Ceresa and Nicolas Duchateau and Hans Martin Kjer and Sergio Vera and Dejea Velardo, Hector and Pavel Mistrik and Rasmus R. Paulsen and Jens Fagertun and Jérôme Noailly and Gemma Piella and Ángel González Ballester, Miguel}, JOURNAL = {Annals of Biomedical Engineering}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {8}, PAGES = {2453-2463}, PUBLISHER = {Springer Verlag}, TITLE = {Automatic model generation framework for computational simulation of cochlear implantation}, VOLUME = {44}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1007/s10439-015-1541-y}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01314765/file/jMangado_ABE_2016_FINALok.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01314765}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{talbot:hal-01338346, AUTHOR = {Hugo Talbot and Federico Spadoni and Christian Duriez and Maxime Sermesant and Stéphane Cotin and Hervé Delingette}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {11-19}, PUBLISHER = {Elsevier}, TITLE = {Interactive Training System for Interventional Electrocardiology Procedures}, VOLUME = {8789}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-12057-7_2}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Endovascular Navigation, Training Simulator, Interactive Simulation, Real-Time Electrophysiology}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01338346/file/Talbot_H.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01338346}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{vemuri:hal-01230752, AUTHOR = {Anant S. Vemuri and Stéphane Nicolau and Adrien Sportes and Jacques Marescaux and Luc Soler and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Biomedical Engineering}, MONTH = {September}, OPTNOTE = {}, NUMBER = {9}, PAGES = {1862-1873}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Inter-Operative Biopsy Site Relocalization in Endoluminal Surgery}, VOLUME = {63}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1109/TBME.2015.2503981}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {video synchronization, Computer assisted intervention, gastro-intestinal (GI) endoscopy, biopsy relocalization, Barrett's Oesophagus, electromagnetic tracking}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01230752/file/TBEDraft_postCorrections_compressed.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01230752}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{verger:hal-01419250, AUTHOR = {Antoine Verger and Yalcin Yagdigul and Axel van Der Gucht and Sylvain Poussier and Eric Guedj and Louis Maillard and Grégoire Malandain and Gabriela Hossu and Renaud Fay and Gilles Karcher and Pierre-Yves Marie}, JOURNAL = {Annals of Nuclear Medicine}, MONTH = {May}, OPTNOTE = {}, NUMBER = {4}, PAGES = {272--278}, PUBLISHER = {Springer Verlag}, TITLE = {Temporal epilepsy lesions may be detected by the voxel-based quantitative analysis of brain FDG-PET images using an original block-matching normalization software}, VOLUME = {30}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1007/s12149-016-1060-4}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Block-matching algorithm, FDG-PET, Mesial temporal lobe epilepsy, Spatial normalization, Statistical parametric mapping}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01419250}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{yamashita:hal-01353372, AUTHOR = {Seigo Yamashita and Hubert Cochet and Frédéric Sacher and Saagar Mahida and Benjamin Berte and Darren Hooks and Jean-Marc Sellal and Al Jefairi, Nora and Antonio Frontera and Yuki Komatsu and Han S Lim and Sana Amraoui and Arnaud Denis and Nicolas Derval and Maxime Sermesant and François Laurent and Mélèze Hocini and Michel Haïssaguerre and Michel Montaudon and Pierre Jais}, JOURNAL = {Circulation. Arrhythmia and electrophysiology}, MONTH = {July}, OPTNOTE = {}, NUMBER = {7}, OPTPAGES = {}, PUBLISHER = {Lippincott Williams & Wilkins}, TITLE = {Impact of New Technologies and Approaches for Post--Myocardial Infarction Ventricular Tachycardia Ablation During Long-Term Follow-Up}, VOLUME = {9}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1161/CIRCEP.116.003901}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Myocardial infarction, Infarction, Heart failure, Catheter ablation, Ventricular tachycardia}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01353372/file/CIRCEP.116.003901.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01353372}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{yamashita:hal-01936715, AUTHOR = {Seigo Yamashita and Frédéric Sacher and Saagar Mahida and Benjamin Berte and Han S Lim and Yuki Komatsu and Sana Amraoui and Arnaud Denis and Nicolas Derval and François Laurent and Maxime Sermesant and Michel Montaudon and Mélèze Hocini and Michel Haïssaguerre and Pierre Jais and Hubert Cochet}, JOURNAL = {Journal of Cardiovascular Electrophysiology}, MONTH = {June}, OPTNOTE = {}, NUMBER = {6}, PAGES = {699 - 708}, PUBLISHER = {Wiley}, TITLE = {Image Integration to Guide Catheter Ablation in Scar-Related Ventricular Tachycardia}, VOLUME = {27}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1111/jce.12963}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Scar-related ventricular tachycardia, Ablation, CMR, MDCT, Imaging}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01936715/file/YAMASHITA_et_al-2016-Journal_of_Cardiovascular_Electrophysiology.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01936715}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{duchateau:hal-01352464, OPTADDRESS = {}, AUTHOR = {Nicolas Duchateau and Gemma Piella and Alejandro Frangi and de Craene, Mathieu}, BOOKTITLE = {Machine learning and medical imaging, 1st Edition}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Guorong Wu and Dinggang Shen and Mert Sabuncu}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {365-382}, PUBLISHER = {Elsevier}, OPTSERIES = {}, TITLE = {Learning pathological deviations from a normal pattern of myocardial motion: Added value for CRT studies?}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2016}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01352464/file/bDuchateau_BookChapter_2016%C2%AD.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01352464}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{alessandrini:hal-01117490, AUTHOR = {Martino Alessandrini and de Craene, Mathieu and Olivier Bernard and Sophie Giffard-Roisin and Pascal Allain and Juergen Weese and Eric Saloux and Hervé Delingette and Maxime Sermesant and Jan d'Hooge}, JOURNAL = {IEEE Transactions on Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {7}, PAGES = {1436-1451}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {A Pipeline for the Generation of Realistic 3D Synthetic Echocardiographic Sequences: Methodology and Open-access Database.}, VOLUME = {34}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2015.2396632}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01117490}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{amelot:hal-01081410, AUTHOR = {A Amelot and E Stretton and Hervé Delingette and Nicholas Ayache and S Froelich and E Mandonnet}, JOURNAL = {Journal of Neuro-Oncology}, MONTH = {January}, OPTNOTE = {}, NUMBER = {2}, PAGES = {381-387}, PUBLISHER = {Springer Verlag}, TITLE = {Expert-validated CSF segmentation of MNI atlas enhances accuracy of virtual glioma growth patterns}, VOLUME = {121}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/s11060-014-1645-5}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01081410/file/BrainMask_Aymeric_figuresBack6%281%29.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01081410}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{audigier:hal-01146319, AUTHOR = {Chloé Audigier and Tommaso Mansi and Hervé Delingette and Saikiran Rapaka and Viorel Mihalef and Daniel Carnegie and Emad Boctor and Michael Choti and Ali Kamen and Nicholas Ayache and Dorin Comaniciu}, JOURNAL = {IEEE Transactions on Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {issue 7}, PAGES = {p 1576-1589}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Efficient Lattice Boltzmann Solver for Patient-Specific Radiofrequency Ablation of Hepatic Tumors}, VOLUME = {34}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2015.2406575}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Radio Frequency ablation, Patient-Specific Simulation, Lattice Boltzmann Method, Heat Transfer, Computational Fluid Dynamics, Therapy Planning}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01146319/file/2013-journal-paper.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01146319}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{benabdallah:hal-02112266, AUTHOR = {Ben Abdallah, Mariem and Jihene Malek and Ahmad Taher Azar and Philippe Montesinos and Hafedh Belmabrouk and Esclarìn Monreal, Julio and Karl Krissian}, JOURNAL = {International Journal of Biomedical Imaging}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {1-16}, PUBLISHER = {Hindawi Publishing Corporation}, TITLE = {Automatic Extraction of Blood Vessels in the Retinal Vascular Tree Using Multiscale Medialness}, VOLUME = {2015}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1155/2015/519024}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Distance transform, similarity measures, contours}, URL = {https://hal.archives-ouvertes.fr/hal-02112266}, OPTURL-PUBLISHER = {}, PDF = {https://hal.archives-ouvertes.fr/hal-02112266/file/519024.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{benseghir:hal-01183573, AUTHOR = {Thomas Benseghir and Grégoire Malandain and Régis Vaillant}, JOURNAL = {International Journal of Computer Assisted Radiology and Surgery}, OPTMONTH = {}, NOTE = {Information Processing in Computer-Assisted Interventions (IPCAI) 2015 Special Issue}, NUMBER = {6}, PAGES = {913-923}, PUBLISHER = {Springer Verlag}, TITLE = {A tree-topology preserving pairing for 3D/2D registration}, VOLUME = {10}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/s11548-015-1207-0}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Registration, Tree, Coronary Arteries, X-ray, Navigation, Iterative Closest Curve}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01183573/file/Article.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01183573}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{cash:hal-01203573, AUTHOR = {David M. Cash and Chris Frost and Leonardo O. Iheme and Devrim Ünay and Melek Kandemir and Jurgen Fripp and Olivier Salvado and Pierrick Bourgeat and Martin Reuter and Bruce Fischl and Marco Lorenzi and Giovanni B. Frisoni and Xavier Pennec and Ronald K. Pierson and Jeffrey L. Gunter and Matthew L. Senjem and Clifford R. Jack and Nicolas Guizard and Vladimir S. Fonov and D. Louis Collins and Marc Modat and Jorge M. Cardoso and Kelvin K. Leung and Hongzhi Wang and Sandhitsu R. Das and Paul A. Yushkevich and Ian B. Malone and Nick C. Fox and Jonathan M. Schott and Sebastien Ourselin}, JOURNAL = {NeuroImage}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {149--164}, PUBLISHER = {Elsevier}, TITLE = {Assessing atrophy measurement techniques in dementia: Results from the MIRIAD atrophy challenge}, VOLUME = {123}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1016/j.neuroimage.2015.07.087}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01203573/file/NIMG_Challenge_Final.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01203573}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{cochet:hal-01244219, AUTHOR = {Hubert Cochet and Arnaud Denis and Yuki Komatsu and Amir S. Jadidi and Aït Ali, Tassadit and Frédéric Sacher and Nicolas Derval and Jatin Relan and Maxime Sermesant and Olivier Corneloup and Mélèze Hocini and Michel Haïssaguerre and François Laurent and Michel Montaudon and Pierre Jaïs}, JOURNAL = {Radiology}, MONTH = {June}, OPTNOTE = {}, NUMBER = {3}, PAGES = {683-91}, PUBLISHER = {Radiological Society of North America}, TITLE = {Automated Quantification of Right Ventricular Fat at Contrast-enhanced Cardiac Multidetector CT in Arrhythmogenic Right Ventricular Cardiomyopathy}, VOLUME = {275}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1148/radiol.14141140}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01244219/file/radiol.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01244219}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{cordier:hal-01241480, AUTHOR = {Nicolas Cordier and Hervé Delingette and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {December}, OPTNOTE = {}, NUMBER = {4}, PAGES = {11}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {A patch-based approach for the segmentation of pathologies: Application to glioma labelling}, VOLUME = {35}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2015.2508150}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {patch-based, multi-atlas, glioma, segmentation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01241480/file/Cordier-TMI-2015-preprint.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01241480}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{lorenzi:hal-01145728, AUTHOR = {Marco Lorenzi and Nicholas Ayache and Xavier Pennec}, JOURNAL = {NeuroImage}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {224--234}, PUBLISHER = {Elsevier}, TITLE = {Regional flux analysis for discovering and quantifying anatomical changes: An application to the brain morphometry in Alzheimer's disease}, VOLUME = {115}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1016/j.neuroimage.2015.04.051}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01145728/file/Paper_flux_2nd_version.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01145728}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{lorenzi:hal-01061017, AUTHOR = {Marco Lorenzi and Xavier Pennec and Giovanni B. Frisoni and Nicholas Ayache}, JOURNAL = {Neurobiology of Aging}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {S42-S52}, PUBLISHER = {Elsevier}, TITLE = {Disentangling normal aging from Alzheimer's disease in structural magnetic resonance images}, VOLUME = {36}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1016/j.neurobiolaging.2014.07.046}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01061017/file/Lorenzi-LongProjection-NBOA-Third.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01061017}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{margeta:hal-01162880, AUTHOR = {Jan Margeta and Antonio Criminisi and Cabrera Lozoya, Rocio and Daniel C. Lee and Nicholas Ayache}, JOURNAL = {Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization}, MONTH = {August}, NOTE = {This is an electronic version of an article published inComputer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualizationon 13 August 2015, by Taylor & Francis, DOI: 10.1080/21681163.2015.1061448.Available online at: http://www.tandfonline.com/10.1080/21681163.2015.1061448.}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Taylor & Francis}, TITLE = {Fine-tuned convolutional neural nets for cardiac MRI acquisition plane recognition}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1080/21681163.2015.1061448}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Transfer learning, Fine-tuning, SSFP, Planes of acquisition, Machine learning, Cardiac magnetic resonance, Convolutional neural networks, Magnetic resonance, Cardiac imaging, Deep learning}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01162880v2/file/author_version.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01162880}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{mcleod:hal-01205342, AUTHOR = {Kristin Mcleod and Maxime Sermesant and Philipp Beerbaum and Xavier Pennec}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {July}, OPTNOTE = {}, NUMBER = {7}, PAGES = {1562--1675}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Spatio-Temporal Tensor Decomposition of a Polyaffine Motion Model for a Better Analysis of Pathological Left Ventricular Dynamics}, VOLUME = {34}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2015.2405579}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {cardiac modelling, atlas, non-rigid image registration, motion tracking, population statistics, tensor decomposition, spatio-temporal alignment, Tetralogy of Fallot}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01205342/file/McLeod_PolyaffineHeartMeanMotion.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01205342}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{menze:hal-01230846, AUTHOR = {Bjoern H Menze and van Leemput, Koen and Danial Lashkari and Tammy Riklin-Raviv and Ezequiel Geremia and Esther Alberts and Philipp Gruber and Susanne Wegener and Marc-André Weber and Gabor Szekely and Nicholas Ayache and Polina Golland}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {A generative probabilistic model and discriminative extensions for brain lesion segmentation -- with application to tumor and stroke}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01230846/file/manuscript.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01230846}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{miolane:hal-01133922, AUTHOR = {Nina Miolane and Xavier Pennec}, JOURNAL = {Entropy}, MONTH = {April}, OPTNOTE = {}, NUMBER = {4}, PAGES = {1850-1881}, PUBLISHER = {MDPI}, TITLE = {Computing Bi-Invariant Pseudo-Metrics on Lie Groups for Consistent Statistics}, VOLUME = {17}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.3390/e17041850}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01133922/file/entropy-17-01850.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01133922}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{tobongomez:hal-01260607, AUTHOR = {Catalina Tobon-Gomez and Arjan J. Geers and Jochen Peters and Jürgen Weese and Karen Pinto and Rashed Karim and Mohammed Ammar and Abdelaziz Daoudi and Jan Margeta and Zulma Sandoval and Birgit Stender and Yefeng Zheng and Maria A Zuluaga and Julian Betancur and Nicholas Ayache and Amine Chikh, Mohammed and Jean-Louis Dillenseger and Michael B. Kelm and Saïd Mahmoudi and Sébastien Ourselin and Alexander Schlaefer and Tobias Schaeffter and Reza Razavi and Kawal S. Rhode}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {July}, OPTNOTE = {}, NUMBER = {7}, PAGES = {1460--1473}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Benchmark for Algorithms Segmenting the Left Atrium From 3D CT and MRI Datasets}, VOLUME = {34}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2015.2398818}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Benchmark testing, automatic segmentations, atrial fibrillation ablation guidance, anatomical regions, 3D CT datasets, Left Atrial Segmentation Challenge, left atrial surface, ground truth, image segmentation, LA appendage trunk, LASC, LA segmentation, left atrial anatomy, left atrium, Magnetic Resonance Imaging, Measurement, medical image processing, MRI datasets, multiple input data, physiological models, pulmonary vein proximal sections, region growing approach, Shape, standardisation framework, statistical analysis, statistical models, biomedical MRI, biophysical modelling, blood vessels, cardiovascular disease, cardiovascular system, Computed Tomography, computerised tomography, diseases, Educational institutions, electroanatomical mapping systems, evaluation code, fibrosis quantification}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://univ-rennes.hal.science/hal-01260607/file/2015_tobongomez_lasc.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://univ-rennes.hal.science/hal-01260607}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{vandersteen:hal-01238195, AUTHOR = {Clair Vandersteen and Thomas Demarcy and Coralie Roger and Eric Fontas and Charles Raffaelli and Nicholas Ayache and Hervé Delingette and Nicolas Guevara}, JOURNAL = {European Archives of Oto-Rhino-Laryngology}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {1-7}, PUBLISHER = {Springer Verlag}, TITLE = {Impact of the surgical experience on cochleostomy location: a comparative temporal bone study between endaural and posterior tympanotomy approaches for cochlear implantation}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/s00405-015-3792-5}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cochlear implantation, Cochleostomy, Minimally invasive surgery, Endaural approach, Learning skills, Surgery resident, Compétences d'apprentissage, Voie endaurale, Chirurgie mini-invasive, Cochléostomie, Implantation cochléaire, Interne en chirurgie}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01238195/file/PROOF.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01238195}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{wong:hal-01095725, AUTHOR = {Ken C.L. Wong and Maxime Sermesant and Kawal Rhode and Matthew Ginks and Aldo Rinaldi, C. and Reza Razavi and Hervé Delingette and Nicholas Ayache}, JOURNAL = {Journal of the mechanical behavior of biomedical materials}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {35-52}, PUBLISHER = {Elsevier}, TITLE = {Velocity-based cardiac contractility personalization from images using derivative-free optimization}, VOLUME = {43}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1016/j.jmbbm.2014.12.002}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {parameter estimation, model personalization, derivative-free optimization, Cardiac contractility, cardiac electromechanical model}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01095725/file/ActiveSubplex_final.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01095725}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{delingette:hal-01250442, OPTADDRESS = {}, AUTHOR = {Hervé Delingette and Nicholas Ayache}, BOOKTITLE = {Handbook of Biomedical Imaging: Methodologies and Clinical Research}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = { Paragios and Nikos and Duncan and Jim and Ayache and Nicholas}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {169-182}, PUBLISHER = {Springer US}, OPTSERIES = {}, TITLE = {Building Patient-Specific Physical and Physiological Computational Models from Medical Images}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-0-387-09749-7_9}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01250442}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{pennec:inria-00616201, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Pierre Fillard}, BOOKTITLE = {Handbook of Biomedical Imaging: Methodologies and Clinical Research}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = { Paragios and Nikos and Duncan and Jim and Ayache and Nicholas}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {147-168}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {Statistical Computing on Non-Linear Spaces for Computational Anatomy}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-0-387-09749-7_8}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/inria-00616201/file/ComputationalAnatomy.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/inria-00616201}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{guibert:hal-00874545, AUTHOR = {Romain Guibert and Kristin Mcleod and Alfonso Caiazzo and Tommaso Mansi and Miguel Angel Fernández and Maxime Sermesant and Xavier Pennec and Irene Vignon-Clementel and Younes Boudjemline and Jean-Frédéric Gerbeau}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1}, PAGES = {63-82}, PUBLISHER = {Elsevier}, TITLE = {Group-wise Construction of Reduced Models for Understanding and Characterization of Pulmonary Blood Flows from Medical Images}, VOLUME = {18}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2013.09.003}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Computational fluid dynamics, Pulmonary artery, Tetralogy of Fallot, Atlas construction, Proper orthogonal decomposition}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00874545/file/MEDIA_Guibert_McLeod_2013.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00874545}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{iannessi:hal-01364012, AUTHOR = {Antoine Iannessi and Pierre Yves Marcy and Olivier Clatz and Nicholas Ayache and Pierre Fillard}, JOURNAL = {Radiographics}, MONTH = {July}, OPTNOTE = {}, NUMBER = {4}, OPTPAGES = {}, PUBLISHER = {Radiological Society of North America (RSNA)}, TITLE = {Touchless User Interface for Intraoperative Image Control: Almost There}, VOLUME = {34}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1148/rg.344135158}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01364012}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{iannessi:hal-01364021, AUTHOR = {A Iannessi and P.-y Marcy and O Clatz and P Fillard and N Ayache}, JOURNAL = {Diagnostic and Interventional Imaging}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Elsevier}, TITLE = {Touchless intra-operative display for interventional radiologist}, OPTVOLUME = {}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1016/j.diii.2013.09.007}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {User-computer interface, Gesture, CT-scan, Interventional radiology, Sterility}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01364021/file/1-s2.0-S2211568413003045-main.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01364021}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{komatsu:hal-01095772, AUTHOR = {Y. Komatsu and A. Jadidi and F. Sacher and A. Denis and M. Daly and N. Derval and A. Shah and H. Lehrmann and C.-I. Park and R. Weber and T. Arentz and G. Pache and Maxime Sermesant and Nicholas Ayache and J. Relan and M. Montaudon and F. Laurent and M. Hocini and M. Haissaguerre and P. Jais and Hubert Cochet}, JOURNAL = {Journal of the American Heart Association}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {4}, PAGES = {10}, PUBLISHER = {Wiley-Blackwell}, TITLE = {Relationship Between MDCT-Imaged Myocardial Fat and Ventricular Tachycardia Substrate in Arrhythmogenic Right Ventricular Cardiomyopathy}, VOLUME = {3}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1161/JAHA.114.000935}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01095772/file/vkIwAd-J%20Am%20Heart%20Assoc-2014-Komatsu-.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01095772}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{lombaert:hal-00979616, AUTHOR = {Herve Lombaert and Leo Grady and Xavier Pennec and Nicholas Ayache and Farida Cheriet}, JOURNAL = {International Journal of Computer Vision}, MONTH = {May}, OPTNOTE = {}, NUMBER = {3}, PAGES = {254-271}, PUBLISHER = {Springer Verlag}, TITLE = {Spectral Log-Demons: Diffeomorphic Image Registration with Very Large Deformations}, VOLUME = {107}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1007/s11263-013-0681-5}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00979616/file/SpectralDemons-IJCV2013.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00979616}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{menze:hal-00935640, AUTHOR = {Bjoern Menze and Andras Jakab and Stefan Bauer and Jayashree Kalpathy-Cramer and Keyvan Farahani and Justin Kirby and Yuliya Burren and Nicole Porz and Johannes Slotboom and Roland Wiest and Levente Lanczi and Elisabeth Gerstner and Marc-Andre Weber and Tal Arbel and Brian Avants and Nicholas Ayache and Patricia Buendia and Louis Collins and Nicolas Cordier and Jason Corso and Antonio Criminisi and Tilak Das and Hervé Delingette and Cagatay Demiralp and Christopher Durst and Michel Dojat and Senan Doyle and Joana Festa and Florence Forbes and Ezequiel Geremia and Ben Glocker and Polina Golland and Xiaotao Guo and Andac Hamamci and Khan Iftekharuddin and Raj Jena and Nigel John and Ender Konukoglu and Danial Lashkari and Antonio Mariz, Jose and Raphael Meier and Sergio Pereira and Doina Precup and S. J. Price and Tammy Riklin-Raviv and Syed Reza and Michael Ryan and Lawrence Schwartz and Hoo-Chang Shin and Jamie Shotton and Carlos Silva and Nuno Sousa and Nagesh Subbanna and Gabor Szekely and Thomas Taylor and Owen Thomas and Nicholas Tustison and Gozde Unal and Flor Vasseur and Max Wintermark and Hye Ye, Dong and Liang Zhao and Binsheng Zhao and Darko Zikic and Marcel Prastawa and Mauricio Reyes and van Leemput, Koen}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {October}, OPTNOTE = {}, NUMBER = {10}, PAGES = {1993-2024}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS)}, VOLUME = {34}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2014.2377694}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00935640v2/file/menze_brats.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00935640}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{porras:hal-01095151, AUTHOR = {Antonio Porras and Martino Alessandrini and de Craene, Mathieu and Nicolas Duchateau and Marta Sitges and Bart Bijnens and Hervé Delingette and Maxime Sermesant and Jan d'Hooge and Alejandro Frangi and Gemma Piella}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {June}, OPTNOTE = {}, NUMBER = {11}, PAGES = {2098 - 2106}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Improved Myocardial Motion Estimation Combining Tissue Doppler and B-Mode Echocardiographic Images}, VOLUME = {33}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2014.2331392}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Echocardiography, free form deformation (FFD), image registration, motion estimation}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01095151}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{prakosa:hal-00858891, AUTHOR = {Adityo Prakosa and Maxime Sermesant and Pascal Allain and Nicolas Villain and Christopher Aldo Rinaldi and Kawal Rhode and Reza Razavi and Hervé Delingette and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Biomedical Engineering}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, PAGES = {235 - 245}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Cardiac Electrophysiological Activation Pattern Estimation from Images using a Patient-Specific Database of Synthetic Image Sequences}, VOLUME = {61}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1109/TBME.2013.2281619}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00858891/file/Journal_2_Adityo_Revision_Final_6.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00858891}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{suinesiaputra:hal-00857223, AUTHOR = {Avan Suinesiaputra and Brett Cowan and Ahmed O. Al-Agamy and Mustafa A. Alattar and Nicholas Ayache and Ahmed S. Fahmy and Ayman M. Khalifa and Pau Medrano-Gracia and Marie-Pierre Jolly and Alan H. Kadish and Daniel C. Lee and Jan Margeta and Simon K. Warfield and Alistair Young}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1}, PAGES = {50-62}, PUBLISHER = {Elsevier}, TITLE = {A Collaborative Resource to Build Consensus for Automated Left Ventricular Segmentation of Cardiac MR Images}, VOLUME = {18}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2013.09.001}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00857223}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{tarabalka:hal-01052543, AUTHOR = {Yuliya Tarabalka and Guillaume Charpiat and Ludovic Brucker and Bjoern Menze}, JOURNAL = {IEEE Transactions on Image Processing}, MONTH = {September}, OPTNOTE = {}, NUMBER = {9}, PAGES = {3829-3840}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Spatio-Temporal Video Segmentation with Shape Growth or Shrinkage Constraint}, VOLUME = {23}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01052543/file/2014_IEEETIP_Tarabalka.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01052543}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{frangi:hal-01016455, OPTADDRESS = {}, AUTHOR = {A. Frangi and Denis Friboulet and Nicholas Ayache and H. Delingette and T. Glatard and C. Hoogendoorn and L. Humbert and K. Lekadir and I. Larrabide and Y. Martelli and F. Peyrin and X. Planes and Maxime Sermesant and M.C. Villa-Uriol and T. Whitmarsh and D. Atkinson}, BOOKTITLE = {Computational Biomedicine}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Peter Coveney and Vanessa Diaz and Peter Hunter and Marco Viceconti}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {59 - 82}, PUBLISHER = {Oxford University Press}, OPTSERIES = {}, TITLE = {Image Based Modelling}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01016455}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{lorenzi:hal-00933229, OPTADDRESS = {}, AUTHOR = {Marco Lorenzi and Xavier Pennec}, BOOKTITLE = {Geometric Theory of Information}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Frank Nielsen}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {243-271}, PUBLISHER = {Springer}, SERIES = {Signals and Communication Technology}, TITLE = {Discrete Ladders for Parallel Transport in Transformation Groups with an Affine Connection Structure}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-05317-2_9}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00933229/file/GSI-BookChapter.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00933229}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{breuilly:hal-00799381, AUTHOR = {Marine Breuilly and Grégoire Malandain and Julien Guglielmi and Robert Marsault and Thierry Pourcher and Philippe R. Franken and Jacques Darcourt}, JOURNAL = {Physics in Medicine and Biology}, MONTH = {April}, OPTNOTE = {}, NUMBER = {8}, PAGES = {2657-2674}, PUBLISHER = {IOP Publishing}, TITLE = {Amplitude-based data selection for optimal retrospective reconstruction in micro-SPECT}, VOLUME = {58}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1088/0031-9155/58/8/2657}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00799381/file/BREUILLY_PMB_2013.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00799381}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{chung:hal-00813880, AUTHOR = {François Chung and Hervé Delingette}, JOURNAL = {Computer Vision and Image Understanding}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {6}, PAGES = {705-717}, PUBLISHER = {Elsevier}, TITLE = {Regional Appearance Modeling based on the Clustering of Intensity Profiles}, VOLUME = {117}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1016/j.cviu.2013.01.011}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00813880/file/Chung-CVIU-2013.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00813880}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{cochet:hal-00813820, AUTHOR = {Hubert Cochet and Y. Komatsu and F. Sacher and A. Jadidi and D. Scherr and M. Riffaud and N. Derval and A. Shah and L. Roten and P. Pascale and Jatin Relan and Maxime Sermesant and Nicholas Ayache and M. Montaudon and F. Laurent and M. Hocini and M. Haïssaguerre and Pierre Jaïs}, JOURNAL = {Journal of Cardiovascular Electrophysiology}, MONTH = {April}, OPTNOTE = {}, NUMBER = {4}, PAGES = {419-426}, PUBLISHER = {Wiley}, TITLE = {Integration of Merged Delayed-Enhanced Magnetic Resonance Imaging and Multi-Detector Computed Tomography for the Guidance of Ventricular Tachycardia Ablation: A Pilot Study}, VOLUME = {24}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1111/jce.12052}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00813820}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{durrleman:hal-00813825, AUTHOR = {Stanley Durrleman and Xavier Pennec and Alain Trouvé and José Braga and Guido Gerig and Nicholas Ayache}, JOURNAL = {International Journal of Computer Vision}, MONTH = {May}, OPTNOTE = {}, NUMBER = {1}, PAGES = {22-59}, PUBLISHER = {Springer Verlag}, TITLE = {Toward a Comprehensive Framework for the Spatiotemporal Statistical Analysis of Longitudinal Shape Data}, VOLUME = {103}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/s11263-012-0592-x}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00813825/file/Durrleman_IJCV_2012_Longitudinal.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00813825}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{frangi:hal-01355239, AUTHOR = {Alejandro F. Frangi and D. Rod Hose and Peter J. Hunter and Nicholas Ayache and Dana Brooks}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {January}, OPTNOTE = {}, NUMBER = {1}, PAGES = {1-7}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Guest Editorial Special Issue on Medical Imaging and Image Computing in Computational Physiology}, VOLUME = {32}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2012.2234320}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01355239/file/IEEE_TMI_MIinCP_v7.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01355239}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{jadidi:hal-00855926, AUTHOR = {Amir S. Jadidi and Hubert Cochet and Ashok J. Shah and Steven J. Kim and Edward Duncan and Shinsuke Miyazaki and Maxime Sermesant and Heiko Lehrmann and Matthieu Lederlin and Nick Linton and Andrei Forclaz and Isabelle Nault and Lena Rivard and Matthew Wright and Xingpeng Liu and Daniel Scherr and Stephen B. Wilton and Laurent Roten and Patrizio Pascale and Nicolas Derval and Frédéric Sacher and Sebastian Knecht and Cornelius Keyl and Mélèze Hocini and Michel Montaudon and François Laurent and Michel Haïssaguerre and Pierre Jaïs}, JOURNAL = {Journal of the American College of Cardiology}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {9}, PAGES = {802-812}, PUBLISHER = {Elsevier}, TITLE = {Inverse relationship between fractionated electrograms and atrial fibrosis in persistent atrial fibrillation: combined magnetic resonance imaging and high-density mapping}, VOLUME = {62}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1016/j.jacc.2013.03.081}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00855926/file/93795_1_merged_1363700367.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00855926}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{komatsu:hal-00855932, AUTHOR = {Yuki Komatsu and Hubert Cochet and Amir Jadidi and Frédéric Sacher and Ashok Shah and Nicolas Derval and Daniel Scherr and Patrizio Pascale and Laurent Roten and Arnaud Denis and Khaled Ramoul and Shinsuke Miyazaki and Matthew Daly and Matthieu Riffaud and Maxime Sermesant and Jatin Relan and Nicholas Ayache and Steven Kim and Michel Montaudon and François Laurent and Mélèze Hocini and Michel Haïssaguerre and Pierre Jaïs}, JOURNAL = {Circulation. Arrhythmia and electrophysiology}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, PAGES = {342-350}, PUBLISHER = {Lippincott Williams & Wilkins}, TITLE = {Regional myocardial wall thinning at multidetector computed tomography correlates to arrhythmogenic substrate in postinfarction ventricular tachycardia: assessment of structural and electrical substrate}, VOLUME = {6}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1161/CIRCEP.112.000191}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00855932}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{leonardi:hal-00813831, AUTHOR = {Benedetta Leonardi and Andrew Taylor and Tommaso Mansi and Ingmar Voigt and Maxime Sermesant and Xavier Pennec and Nicholas Ayache and Younes Boudjemline and Giacomo Pongiglione}, JOURNAL = {European Heart Journal - Cardiovascular Imaging}, MONTH = {April}, OPTNOTE = {}, NUMBER = {4}, PAGES = {381-6}, PUBLISHER = {Oxford UP}, TITLE = {Computational modelling of the right ventricle in repaired tetralogy of Fallot: can it provide insight into patient treatment?}, VOLUME = {14}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1093/ehjci/jes239}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00813831/file/EHJCI-2013.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00813831}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{lorenzi:hal-00819895, AUTHOR = {Marco Lorenzi and Nicholas Ayache and Giovanni B. Frisoni and Xavier Pennec}, JOURNAL = {NeuroImage}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1}, PAGES = {470-483}, PUBLISHER = {Elsevier}, TITLE = {LCC-Demons: a robust and accurate symmetric diffeomorphic registration algorithm}, VOLUME = {81}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1016/j.neuroimage.2013.04.114}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00819895v2/file/Lorenzi-LCC2012.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00819895}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{lorenzi:hal-00870489, AUTHOR = {Marco Lorenzi and Xavier Pennec}, JOURNAL = {Journal of Mathematical Imaging and Vision}, MONTH = {October}, OPTNOTE = {}, NUMBER = {1-2}, PAGES = {5-17}, PUBLISHER = {Springer Verlag}, TITLE = {Efficient Parallel Transport of Deformations in Time Series of Images: from Schild's to Pole Ladder}, VOLUME = {50}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/s10851-013-0470-3}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00870489/file/Lorenzi-PoleLadder2013.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00870489}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{lorenzi:hal-00813835, AUTHOR = {Marco Lorenzi and Xavier Pennec}, JOURNAL = {International Journal of Computer Vision}, MONTH = {November}, OPTNOTE = {}, NUMBER = {2}, PAGES = {111-127}, PUBLISHER = {Springer Verlag}, TITLE = {Geodesics, Parallel Transport & One-parameter Subgroups for Diffeomorphic Image Registration}, VOLUME = {105}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/s11263-012-0598-4}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00813835/file/Lorenzi-IJCV2012.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00813835}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{marchesseau:hal-00819806, AUTHOR = {Stéphanie Marchesseau and Hervé Delingette and Maxime Sermesant and Cabrera Lozoya, Rocio and Catalina Tobon-Gomez and Philippe Moireau and Figueras I Ventura, Rosa Maria and Karim Lekadir and Alfredo Hernandez and Mireille Garreau and Erwan Donal and Christophe Leclercq and Simon G. Duckett and Kawal Rhode and Christopher Aldo Rinaldi and Alejandro F. Frangi and Reza Razavi and Dominique Chapelle and Nicholas Ayache}, JOURNAL = {Medical Image Analysis}, MONTH = {May}, OPTNOTE = {}, NUMBER = {7}, PAGES = {816-829}, PUBLISHER = {Elsevier}, TITLE = {Personalization of a Cardiac Electromechanical Model using Reduced Order Unscented Kalman Filtering from Regional Volumes}, VOLUME = {17}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2013.04.012}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00819806/file/Finalmanuscript.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00819806}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{marchesseau:hal-00813849, AUTHOR = {Stéphanie Marchesseau and Hervé Delingette and Maxime Sermesant and Michel Sorine and Kawal Rhode and Simon G. Duckett and Christopher Aldo Rinaldi and Reza Razavi and Nicholas Ayache}, JOURNAL = {Journal of the mechanical behavior of biomedical materials}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {259-271}, PUBLISHER = {Elsevier}, TITLE = {Preliminary Specificity Study of the Bestel-Clément-Sorine Electromechanical Model of the Heart using Parameter Calibration from Medical Images}, VOLUME = {20}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1016/j.jmbbm.2012.11.021}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00813849/file/mbioMarchesseau2012.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00813849}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{menze:hal-00917886, AUTHOR = {Bjoern Menze and Georg Langs and Zhuowen Tu and Antonio Criminisi}, JOURNAL = {Medical Image Analysis}, MONTH = {December}, OPTNOTE = {}, NUMBER = {8}, PAGES = {1282}, PUBLISHER = {Elsevier}, TITLE = {Whole-body anatomy localization via classification and regression forests}, VOLUME = {17}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2013.09.005}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00917886}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{odening:hal-00855929, AUTHOR = {Katja E. Odening and Bernd A. Jung and Corinna N. Lang and Cabrera Lozoya, Rocio and David Ziupa and Marius Menza and Jatin Relan and Gerlind Franke and Perez Feliz, Stefanie and Gideon Koren and Manfred Zehender and Christoph Bode and Michael Brunner and Maxime Sermesant and Daniela Föll}, JOURNAL = {Heart Rhythm}, OPTMONTH = {}, NOTE = {Focus Issue: Sudden Cardiac Death}, NUMBER = {10}, PAGES = {1533-1541}, PUBLISHER = {Elsevier}, TITLE = {Spatial Correlation of Action Potential Duration and Diastolic Dysfunction in Transgenic and Drug-induced LQT2 Rabbits}, VOLUME = {10}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1016/j.hrthm.2013.07.038}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00855929}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{pennec:hal-00858908, AUTHOR = {Xavier Pennec and Sarang Joshi and Mads Nielsen}, JOURNAL = {International Journal of Computer Vision}, MONTH = {August}, OPTNOTE = {}, NUMBER = {2}, PAGES = {109-110}, PUBLISHER = {Springer Verlag}, TITLE = {Mathematical Methods for Medical Imaging}, VOLUME = {105}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/s11263-013-0650-z}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00858908}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{prakosa:hal-00813861, AUTHOR = {A. Prakosa and Maxime Sermesant and H. Delingette and S. Marchesseau and E. Saloux and Pascal Allain and N. Villain and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {January}, OPTNOTE = {}, NUMBER = {1}, PAGES = {99-109}, PUBLISHER = {Institute of Electrical and Electronics Engineers}, TITLE = {Generation of Synthetic but Visually Realistic Time Series of Cardiac Images Combining a Biophysical Model and Clinical Images}, VOLUME = {32}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2012.2220375}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00813861/file/PrakosaTMI2012.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00813861}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{rekik:hal-00813881, AUTHOR = {Islem Rekik and Stéphanie Allassonnière and Olivier Clatz and Ezequiel Geremia and Erin Stretton and Hervé Delingette and Nicholas Ayache}, JOURNAL = {Computer Vision and Image Understanding}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {3}, PAGES = {238--249}, PUBLISHER = {Elsevier}, TITLE = {Tumor Growth Parameters Estimation and Source Localization From a Unique Time Point: Application to Low-grade Gliomas}, VOLUME = {117}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1016/j.cviu.2012.11.001}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00813881/file/Rekik-CVIU-2013.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00813881}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{sommer:hal-00813868, AUTHOR = {Stefan Sommer and François Lauze and Mads Nielsen and Xavier Pennec}, JOURNAL = {Journal of Mathematical Imaging and Vision}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {3}, PAGES = {292-308}, PUBLISHER = {Springer Verlag}, TITLE = {Sparse Multi-Scale Diffeomorphic Registration: the Kernel Bundle Framework}, VOLUME = {46}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/s10851-012-0409-0}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00813868/file/Sommer_JMIV2013.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00813868}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{sommer:hal-00813869, AUTHOR = {Stefan Sommer and Mads Nielsen and Sune Darkner and Xavier Pennec}, JOURNAL = {SIAM Journal on Imaging Sciences}, MONTH = {February}, OPTNOTE = {}, NUMBER = {1}, PAGES = {341-367}, PUBLISHER = {Society for Industrial and Applied Mathematics}, TITLE = {Higher-order momentum distributions and locally affine LDDMM registration}, VOLUME = {6}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1137/110859002}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00813869}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{talbot:hal-00797354, AUTHOR = {Hugo Talbot and Stéphanie Marchesseau and Christian Duriez and Maxime Sermesant and Stéphane Cotin and Hervé Delingette}, JOURNAL = {Interface Focus}, MONTH = {April}, OPTNOTE = {}, NUMBER = {2}, PAGES = {4}, PUBLISHER = {Royal Society publishing}, SERIES = {The Virtual Physiological Human: Integrative Approaches to Computational Biomedicine}, TITLE = {Towards an Interactive Electromechanical Model of the Heart}, VOLUME = {3}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1098/rsfs.2012.0091}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = { electrophysiology cardiac mechanics training simulation interactive SOFA framework}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00797354/file/Interface_Focus-2013-Talbot.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00797354}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{tobongomez:hal-00840037, AUTHOR = {Catalina Tobon-Gomez and Nicolas Duchateau and Rafael Sebastian and Stéphanie Marchesseau and Oscar Camara and Erwan Donal and de Craene, Mathieu and Ali Pashaei and Jatin Relan and Martin Steghofer and Pablo Lamata and Hervé Delingette and Simon G. Duckett and Mireille Garreau and Alfredo Hernandez and Kawal S. Rhode and Maxime Sermesant and Nicholas Ayache and Christophe Leclercq and Reza Razavi and Nicolas P. Smith and Alejandro F. Frangi}, JOURNAL = {Medical and Biological Engineering and Computing}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {1--16}, PUBLISHER = {Springer Verlag}, TITLE = {Understanding the mechanisms amenable to CRT response: from pre-operative multimodal image data to patient-specific computational models}, OPTVOLUME = {}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/s11517-013-1044-7}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00840037}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{tobongomez:hal-00855928, AUTHOR = {Catalina Tobon-Gomez and de Craene, Mathieu and Kristin Mcleod and Lennart Tautz and Wenzhe Shi and Anja Hennemuth and Adityo Prakosa and Hengui Wang and Gerald Carr-White and Sergio Kapetanakis and Albert Lutz and Vernon Rasche and Tobias Schaeffter and Constantin Butakoff and Oskar Friman and Tommaso Mansi and Maxime Sermesant and Xiahai Zhuang and Sébastien Ourselin and Hans Otto Peitgen and Xavier Pennec and Reza Razavi and Daniel Rueckert and Alejandro F. Frangi and Kawal Rhode}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {6}, PAGES = {632-648}, PUBLISHER = {Elsevier}, TITLE = {Benchmarking framework for myocardial tracking and deformation algorithms: an open access database}, VOLUME = {17}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2013.03.008}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00855928/file/tobon-gomez12a_v2.0.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00855928}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{toussaint:hal-00845062, AUTHOR = {Nicolas Toussaint and Christian T. Stoeck and Tobias Schaeffter and Sebastian Kozerke and Maxime Sermesant and Philip G. Batchelor}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, NOTE = {In press}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Elsevier}, TITLE = {In vivo human cardiac fibre architecture estimation using shape-based diffusion tensor processing}, OPTVOLUME = {}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Diffusion tensor imaging}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00845062}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{unkelbach:hal-00917846, AUTHOR = {Jan Unkelbach and Bjoern Menze and Ender Konukoglu and Florian Dittmann and Nicholas Ayache and Helen Shi}, JOURNAL = {Physics in Medicine and Biology}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {IOP Publishing}, TITLE = {Radiotherapy planning for glioblastoma based on a tumor growth model: implications for spatial dose redistribution}, OPTVOLUME = {}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00917846/file/unkelbach_13_dose.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00917846}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{unkelbach:hal-00917869, AUTHOR = {Jan Unkelbach and Bjoern Menze and Ender Konukoglu and Florian Dittmann and Matthieu Le and Nicholas Ayache and Helen Shi}, JOURNAL = {Physics in Medicine and Biology}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {IOP Publishing}, TITLE = {Radiotherapy planning for glioblastoma based on a tumor growth model: improving target volume delineation}, OPTVOLUME = {}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1088/0031-9155/59/3/747}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00917869v2/file/Unkelbach-Physics-v2.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00917869}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{vidalmigallon:inserm-00855958, AUTHOR = {Irina Vidal-Migallón and Olivier Commowick and Xavier Pennec and Julien Dauguet and Tom Vercauteren}, JOURNAL = {Insight Journal}, MONTH = {July}, NOTE = {Open peer-review journal. Open code / open data.}, OPTNUMBER = {}, PAGES = {16}, PUBLISHER = {Insight Software Consortium}, TITLE = {GPU & CPU implementation of Young - Van Vliet's Recursive Gaussian Smoothing Filter}, OPTVOLUME = {}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {GPU, OpenCL, Recursive Gaussian Smoothing}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inserm.hal.science/inserm-00855958/file/IJ_896_3_InsightJournal_YVV.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inserm.hal.science/inserm-00855958}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{weese:hal-00851239, AUTHOR = {Jürgen Weese and Nicholas Ayache and Nicolas P. Smith}, JOURNAL = {Medical and Biological Engineering and Computing}, OPTMONTH = {}, NOTE = {Editorial}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Springer Verlag}, TITLE = {Personalized Cardiac Modeling and Simulations in euHeart}, OPTVOLUME = {}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/s11517-013-1103-0}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00851239}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{decraene:hal-00840039, AUTHOR = {de Craene, Mathieu and Stéphanie Marchesseau and Brecht Heyde and Hang Gao and M. Alessandrini and Olivier Bernard and Gemma Piella and Antonio Porras and Lennart Tautz and Anja Hennemuth and Adityo Prakosa and Hervé Liebgott and Oudom Somphone and Pascal Allain and S. 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Michael Kelm and Frederik O. Kaster and A. Henning and Marc-André Weber and P. Bachert and P. Boesiger and Fred A. Hamprecht and Bjoern H. 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Tinao}, JOURNAL = {Cell and Tissue Banking}, OPTMONTH = {}, NOTE = {to appear}, OPTNUMBER = {}, OPTPAGES = {}, TITLE = {Validity of an Automatic Measure Protocol in Distal Femur for Allograft Selection from a Three-Dimensional Virtual Bone Bank System}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Christof.Seiler/RitaccoSeilerCTB2012.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Lorenzi:PSY:2012, AUTHOR = {Roberta Rossi and Michela Pievani and Marco Lorenzi and Marina Boccardi and Rossella Beneduce and Stefano Bignotti and Genoveffa Borsci and Maria Cotelli and Panteleimon Giannakopoulos and Laura R. Magni and Luciana Rillosi and Sandra Rosini and Giuseppe Rossi and Giovanni B. Frisoni}, JOURNAL = {Psychiatry Research: Neuroimaging}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {S0925-4927}, TITLE = {Structural brain features of borderline personality and bipolar disorders}, VOLUME = {12}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Marco.Lorenzi/Lorenzi-PSY-2012.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {IT}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00809081}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Seiler:TERM:2012, AUTHOR = {Christof Seiler and A. Gazdhar and Mauricio Reyes and L.M. Benneker and T. Geiser and K.A. Siebenrock and B. Gantenbein-Ritter}, JOURNAL = {Journal of Tissue Engineering and Regenerative Medicine}, OPTMONTH = {}, NOTE = {to appear}, OPTNUMBER = {}, OPTPAGES = {}, TITLE = {Time-Lapse Microscopy and Classification of 2D Human Mesenchymal Stem Cells Based on Cell Shape Picks Up Myogenic from Osteogenic and Adipogenic Differentiation}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Christof.Seiler/SeilerTERM2012.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Seiler:MEDIA:2012, AUTHOR = {Christof Seiler and Xavier Pennec and Mauricio Reyes}, JOURNAL = {Medical Image Analysis (MedIA)}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {7}, PAGES = {1371-1384}, TITLE = {Capturing the Multiscale Anatomical Shape Variability with Polyaffine Transformation Trees}, VOLUME = {16}, YEAR = {2012}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2012.05.011}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Christof.Seiler/SeilerPolyaffineTransformationTreesMedIA2012.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {CH}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813866}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Sermesant:MEDIA:2012, AUTHOR = {Maxime Sermesant and R. Chabiniok and P. Chinchapatnam and Tommaso Mansi and F. Billet and P. Moireau and Jean-Marc Peyrat and Ken C. L. Wong and Jatin Relan and Kawal Rhode and M. Ginks and P. Lambiase and Hervé Delingette and M. Sorine and C. Aldo Rinaldi and D. Chapelle and Reza Razavi and Nicholas Ayache}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1}, PAGES = {201-215}, TITLE = {Patient-specific electromechanical models of the heart for the prediction of pacing acute effects in CRT: A preliminary clinical validation}, VOLUME = {16}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/MedIAsermesant2011.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00616191/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{thariat:DII:2012, AUTHOR = {Juliette Thariat and Pierre-Yves Marcy and A. Lacout and Liliane Ramus and T. Girinsky and Y. Pointreau and Grégoire Malandain}, JOURNAL = {Diagn Interv Imaging}, MONTH = {May}, OPTNOTE = {}, NUMBER = {5}, PAGES = {342-50}, TITLE = {Radiotherapy and radiology: joint efforts for modern radiation planning and practice}, VOLUME = {93}, YEAR = {2012}, ABSTRACT = {With new irradiation techniques, the dose can be better matched to the contours of the tumour. The corollary is that greater precision is required. Recent intercomparison studies of treatment plans have emphasized the need to harmonise contouring practices. More of a consensus approach is based on using adaptive imaging modalities, expert group recommendations and automatic segmentation atlases, on harmonisation of dosimetric decisions through employing exhaustive nomograms for organs at risk, and on indexes for choosing optimal treatment plans. On another level, quality assurance and data pooling programmes have been set up, making use of DICOM-RT data transfer (image networks). The combination of several irradiation techniques (for example, intensity-modulated conformal radiation therapy plus CyberKnife((R)) boost and re-irradiation), making it possible to irradiate tumours better, requires the cumulative doses to be recorded by dose summation software. Real awareness has been achieved in recent years as regards improving the quality of treatment, pooling data and harmonising practices.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813871}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{thariat-ramus:ijrobp:2012, AUTHOR = {Juliette Thariat and Liliane Ramus and Philippe Maingon and Guillaume Odin and Vincent Gregoire and Vincent Darcourt and Nicolas Guevara and Marie-Helene Orlanducci and Serge Marcie and Gilles Poissonnet and Pierre-Yves Marcy and Alex Bozec and Olivier Dassonville and Laurent Castillo and Francois Demard and Jose Santini and Grégoire Malandain}, JOURNAL = {Int J Radiat Oncol Biol Phys}, MONTH = {April}, OPTNOTE = {}, NUMBER = {5}, PAGES = {1858-65}, TITLE = {DENTALMAPS: Automatic Dental Delineation for Radiotherapy Planning in Head-and-neck Cancer}, VOLUME = {82}, YEAR = {2012}, ABSTRACT = {PURPOSE: To propose an automatic atlas-based segmentation framework of the dental structures, called Dentalmaps, and to assess its accuracy and relevance to guide dental care in the context of intensity-modulated radiotherapy. METHODS AND MATERIALS: A multi-atlas-based segmentation, less sensitive to artifacts than previously published head-and-neck segmentation methods, was used. The manual segmentations of a 21-patient database were first deformed onto the query using nonlinear registrations with the training images and then fused to estimate the consensus segmentation of the query. RESULTS: The framework was evaluated with a leave-one-out protocol. The maximum doses estimated using manual contours were considered as ground truth and compared with the maximum doses estimated using automatic contours. The dose estimation error was within 2-Gy accuracy in 75\% of cases (with a median of 0.9 Gy), whereas it was within 2-Gy accuracy in 30\% of cases only with the visual estimation method without any contour, which is the routine practice procedure. CONCLUSIONS: Dose estimates using this framework were more accurate than visual estimates without dental contour. Dentalmaps represents a useful documentation and communication tool between radiation oncologists and dentists in routine practice. Prospective multicenter assessment is underway on patients extrinsic to the database.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Liliane.Ramus/thariat-ramus_IJROBP_2011.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00616186/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Vichot2012, AUTHOR = {Florian Vichot and H. Cochet and Benoit Bleuzé and Nicolas Toussaint and P. Jaïs and Maxime Sermesant}, HOWPUBLISHED = {rlhttp://hdl.handle.net/10380/3361}, INSTITUTION = {INRIA}, JOURNAL = {Midas Journal}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, TITLE = {Cardiac Interventional Guidance using Multimodal Data Processing and Visualisation: medInria as an Interoperability Platform}, OPTVOLUME = {}, YEAR = {2012}, ABSTRACT = {medInria is a free medical imaging software developed at Inria, which aims at providing clinicians with state-of-the-art algorithms dedicated to medical image processing and visualization. Efforts have been made to simplify the user interface, while keeping high-level algorithms. In this particular article, we will concentrate on its use in preoperative preparation for cardiac interventions, and how we handle the difficulties arising from the lack of standard format for data types such as meshes or fibers, the absence of a common programming interface for data processing algorithms, notably registration, and the issues of visualisation where display conventions would be beneficial.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Standards, Data Formats, Registration, Visualisation}, URL = {http://www.midasjournal.org/download/pdf/19873/IJ_863_2_medInriaInteroperabilityPlatform.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813873}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{faure2012sofa, OPTADDRESS = {}, AUTHOR = {François Faure and Christian Duriez and Hervé Delingette and Jérémie Allard and Benjamin Gilles and Stéphanie Marchesseau and Hugo Talbot and Hadrien Courtecuisse and Guillaume Bousquet and Igor Peterlik and Stéphane Cotin}, BOOKTITLE = {Soft Tissue Biomechanical Modeling for Computer Assisted Surgery}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Yohan Payan}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {SOFA: A Multi-Model Framework for Interactive Physical Simulation}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, DOI = {10.1007/8415_2012_125}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/hal-00681539}, X-ID-HAL = {hal-00681539}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{pennec:MIG:2012, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Vincent Arsigny}, BOOKTITLE = {Matrix Information Geometry}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Frederic Barbaresco and Amit Mishra and Frank Nielsen}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {123-166}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {Exponential Barycenters of the Canonical Cartan Connection and Invariant Means on Lie Groups}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2012}, ABSTRACT = {When performing statistics on elements of sets that possess a particular geometric structure, it is desirable to respect this structure. For instance in a Lie group, it would be judicious to have a notion of a mean which is stable by the group operations (composition and inversion). Such a property is ensured for Riemannian center of mass in Lie groups endowed with a bi-invariant Riemannian metric, like compact Lie groups (e.g. rotations). However, bi-invariant Riemannian metrics do not exist for most non compact and non-commutative Lie groups. This is the case in particular for rigid-body transformations in any dimension greater than one, which form the most simple Lie group involved in biomedical image registration. In this paper, we propose to replace the Riemannian metric by an affine connection structure on the group. We show that the canonical Cartan connections of a connected Lie group provides group geodesics which are completely consistent with the composition and inversion. With such a non-metric structure, the mean cannot be defined by minimizing the variance as in Riemannian Manifolds. However, the characterization of the mean as an exponential barycenter gives us an implicit definition of the mean using a general barycentric equation. Thanks to the properties of the canonical Cartan connection, this mean is naturally bi-invariant. We show the local existence and uniqueness of the invariant mean when the dispersion of the data is small enough. We also propose an iterative fixed point algorithm and demonstrate that the convergence to the invariant mean is at least linear. In the case of rigid-body transformations, we give a simple criterion for the global existence and uniqueness of the bi-invariant mean, which happens to be the same as for rotations. We also give closed forms for the bi-invariant mean in a number of simple but instructive cases, including 2D rigid transformations. For general linear transformations, we show that the bi-invariant mean is a generalization of the (scalar) geometric mean, since the determinant of the bi-invariant mean is the geometric mean of the determinants of the data. Finally, we extend the theory to higher order moments, in particular with the covariance which can be used to define a local bi-invariant Mahalanobis distance.}, DOI = {10.1007/978-3-642-30232-9_7}, ISBN = {978-3-642-30231-2}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://hal.inria.fr/hal-00699361/PDF/Bi-Invar-Means.pdf}, OPTURL-PUBLISHER = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00699361}, X-ID-HAL = {hal-00699361}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Andre:MEDIA:11, AUTHOR = {Barbara André and Tom Vercauteren and Anna M. Buchner and Michael B. Wallace and Nicholas Ayache}, JOURNAL = {Medical Image Analysis}, MONTH = {August}, OPTNOTE = {}, NUMBER = {4}, PAGES = {460--476}, TITLE = {A Smart Atlas for Endomicroscopy using Automated Video Retrieval}, VOLUME = {15}, YEAR = {2011}, ABSTRACT = {To support the challenging task of early epithelial cancer diagnosis from in vivo endomicroscopy, we propose a content-based video retrieval method that uses an expert-annotated database. Motivated by the recent successes of non-medical content-based image retrieval, we first adjust the standard Bag-of-Visual-Words method to handle single endomicroscopic images. A local dense multi-scale description is proposed to keep the proper level of invariance, in our case to translations, in-plane rotations and affine transformations of the intensities. Since single images may have an insufficient field-of-view to make a robust diagnosis, we introduce a video-mosaicing technique that provides large field-of-view mosaic images. To remove outliers, retrieval is followed by a geometrical approach that captures a statistical description of the spatial relationships between the local features. Building on image retrieval, we then focus on efficient video retrieval. Our approach avoids the time-consuming parts of the video-mosaicing by relying on coarse registration results only to account for spatial overlap between images taken at different times. To evaluate the retrieval, we perform a simple nearest neighbors classification with leave-one-patient-out cross-validation. From the results of binary and multi-class classification, we show that our approach outperforms, with statistical significance, several state-of-the art methods. We obtain a binary classification accuracy of 94.2%, which is quite close to clinical expectations.}, DOI = {10.1016/j.media.2011.02.003}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Content-Based Video Retrieval (CBVR), Endomicroscopy, Bag-of-Visual-Words (BoW), Video-mosaicing}, URL = {https://www-sop.inria.fr/asclepios/Publications/Barbara.Andre/ANDRE-MedIA2011-published.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616190}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Ayache:MedScience:11, AUTHOR = {Nicholas Ayache and Olivier Clatz and Hervé Delingette and Grégoire Malandain and Xavier Pennec and Maxime Sermesant}, JOURNAL = {Médecine / Sciences}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {208--213}, PUBLISHER = {EDK France}, TITLE = {Vers un patient numérique personnalisé pour le diagnostic et la thérapie guidés par l'image}, VOLUME = {27}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/Asclepios-Medecine-sciences2011.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {no}, X-INTERNATIONAL-AUDIENCE = {no}, X-INVITED-CONFERENCE = {yes}, X-PAYS = {}, X-SCIENTIFIC-POPULARIZATION = {yes}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00616192/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{BANMayache2011, AUTHOR = {N. Ayache and H. Delingette and M. Sermesant}, JOURNAL = {Bulletin de l'Académie Nationale de Médecine}, MONTH = {November}, OPTNOTE = {}, NUMBER = {8}, OPTPAGES = {}, TITLE = {Le coeur numérique personnalisé}, VOLUME = {195}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/Ayache-et-al-Academie-Medecine-24Oct2011.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Brun:TMI:2011, AUTHOR = {Caroline Brun and Natasha Leporé and Xavier Pennec and Yi-Yu Chou and Agatha Lee and De Zubicaray, Greig and Katie Mcmahon and Margaret Wright and James C. Gee and Paul Thompson}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {February}, NOTE = {PMID: 20813636}, NUMBER = {2}, PAGES = {184-202}, PUBLISHER = {IEEE}, TITLE = {A nonconservative Lagrangian framework for statistical fluid registration-SAFIRA.}, VOLUME = {30}, YEAR = {2011}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2010.2067451}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Brun_TMI09.pdf}, OPTURL-PUBLISHER = {}, PMID = {20813636}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616099}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Camara:PBMB:2011, AUTHOR = {O. Camara and M. Sermesant and P. Lamata and L. Wang and M. Pop and J. Relan and M. De Craene and H. Delingette and H. Liu and S. Niederer and A. Pashaei and G. Plank and D. Romero and R. Sebastian and K.C.L. Wong and H. Zhang and N. Ayache and A.F. Frangi and P. Shi and N.P. Smith and G.A. Wright}, JOURNAL = {Progress in Biophysics and Molecular Biology}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {122-133}, TITLE = {Inter-Model Consistency and Complementarity: Learning from ex-vivo Imaging and Electrophysiological Data towards an Integrated Understanding of Cardiac Physiology}, VOLUME = {107}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/PBMBcamara2011.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616197}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Chung:TVCJ:2011, AUTHOR = {François Chung and Jérôme Schmid and Nadia Magnenat-Thalmann and Hervé Delingette}, JOURNAL = {The Visual Computer}, MONTH = {February}, NOTE = {10.1007/s00371-010-0536-9}, NUMBER = {2}, PAGES = {141-151}, TITLE = {Comparison of statistical models performance in case of segmentation using a small amount of training datasets}, VOLUME = {27}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Francois.Chung/comparison_of_statistical_models_performance_in_case_of_segmentation_using_a_small_amount_of_training_datasets.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {CH}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616199}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{delingette:inria-00616183, AUTHOR = {Hervé Delingette and Florence Billet and Ken C.L. Wong and Maxime Sermesant and Rhode, Kawal, S. and Matt Ginks and C.A. Rinaldi and Reza Razavi and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Biomedical Engineering}, OPTMONTH = {}, NOTE = {In Press}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {undefined or unknown publisher}, TITLE = {Personalization of Cardiac Motion and Contractility from Images using Variational Data Assimilation}, OPTVOLUME = {}, YEAR = {2011}, ABSTRACT = {Personalization is a key aspect of biophysical models in order to impact clinical practice. In this paper, we propose a personalization method of electromechanical models of the heart from cine-MR images based on the adjoint method. After estimation of electrophysiological parameters, the cardiac motion is estimated based on a proactive electromechanical model. Then cardiac contractilities on two or three regions are estimated by minimizing the discrepancy between measured and simulation motion. Evaluation of the method on three patients with infarcted or dilated myocardium is provided.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00616183}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Durrleman:NImg:11, AUTHOR = {Stanley Durrleman and Pierre Fillard and Xavier Pennec and Alain Trouvé and Nicholas Ayache}, JOURNAL = {NeuroImage}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {3}, PAGES = {1073-1090}, TITLE = {Registration, Atlas Estimation and Variability Analysis of White Matter Fiber Bundles Modeled as Currents}, VOLUME = {55}, YEAR = {2011}, OPTABSTRACT = {}, DOI = {10.1016/j.neuroimage.2010.11.056}, OPTISBN = {}, ISSN = {1053-8119}, KEYWORDS = {Computational Anatomy}, URL = {https://www-sop.inria.fr/asclepios/Publications/Stanley.Durrleman/Durrleman_NImg10.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00541930/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Geremia:NeuroImage:11, AUTHOR = {Ezequiel Geremia and Olivier Clatz and Bjoern H. Menze and Ender Konukoglu and Antonio Criminisi and Nicholas Ayache}, JOURNAL = {NeuroImage}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {378-90}, TITLE = {Spatial Decision Forests for MS Lesion Segmentation in Multi-Channel Magnetic Resonance Images}, VOLUME = {57(2)}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Ezequiel.Geremia/Geremia-MS-NeuroImage-2011.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616194}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{kelm:NBM:11, AUTHOR = {BM Kelm and FO Kaster and A Henning and MA Weber and P Bachert and P Boesiger and FA Hamprecht and BH Menze}, JOURNAL = {NMR in Biomedicine}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, TITLE = {Using spatial prior knowledge in the spectral fitting of MRS images}, VOLUME = {[Epub ahead of print]}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://people.csail.mit.edu/menze/papers/kelm_10_using.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616193}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Konukoglu:PBMB:2011, AUTHOR = {E. Konukoglu and J. Relan and U. Cilingir and B. Menze and P. Chinchapatnam and A. Jadidi and H. Cochet and M. Hocini and H. Delingette and P. Jaïs and M. Haïssaguerre and N. Ayache and M. Sermesant}, JOURNAL = {Progress in Biophysics and Molecular Biology}, MONTH = {October}, OPTNOTE = {}, NUMBER = {1}, PAGES = {134-146}, TITLE = {Efficient Probabilistic Model Personalization Integrating Uncertainty on Data and Parameters: Application to Eikonal-Diffusion Models in Cardiac Electrophysiology}, VOLUME = {107}, YEAR = {2011}, OPTABSTRACT = {}, DOI = {10.1016/j.pbiomolbio.2011.07.002}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/KonukogluPBMB2011.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616198}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Langs:Neuroimage:2011, AUTHOR = {Georg Langs and Bjoern H. Menze and Danial Lashkari and Polina Golland}, JOURNAL = {NeuroImage}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {497-507}, TITLE = {Detecting stable distributed patterns of brain activation using Gini contrast}, VOLUME = {56}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://people.csail.mit.edu/langs/Georg_Langs/index_files/rf_rev.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {US}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616195}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Lorenzi:DaA10:11, AUTHOR = {Marco Lorenzi and Alberto Beltramello and Nicola Mercuri and Elisa Canu and Giada Zoccatelli and Francesca Pizzini and Franco Alessandrini and Maria Cotelli and Sandra Rosini and Daniela Costardi and Carlo Caltagirone and Giovanni Frisoni}, JOURNAL = {Drugs and Aging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {3}, PAGES = {205--217}, TITLE = {Effect of memantine on resting state default mode network activity in Alzheimer's disease}, VOLUME = {28}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {IT}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616182}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Mansi:IJCV:11, AUTHOR = {Tommaso Mansi and Xavier Pennec and Maxime Sermesant and Hervé Delingette and Nicholas Ayache}, JOURNAL = {International Journal of Computer Vision}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1}, PAGES = {92--111}, TITLE = {iLogDemons: A Demons-Based Registration Algorithm for Tracking Incompressible Elastic Biological Tissues}, VOLUME = {92}, YEAR = {2011}, OPTABSTRACT = {}, DOI = {10.1007/s11263-010-0405-z}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tommaso.Mansi/mansi10IJCV.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616187}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Mansi:TMI:11, AUTHOR = {Tommaso Mansi and Ingmar Voigt and Benedetta Leonardi and Xavier Pennec and Stanley Durrleman and Maxime Sermesant and Hervé Delingette and Andrew M. Taylor and Younes Boudjemline and Giacomo Pongiglione and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {September}, OPTNOTE = {}, NUMBER = {30}, PAGES = {1605--1616}, TITLE = {A Statistical Model for Quantification and Prediction of Cardiac Remodelling: Application to Tetralogy of Fallot}, VOLUME = {9}, YEAR = {2011}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2011.2135375}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tommaso.Mansi/MansiTMI2011.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616185}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{murphy:itmi:2011, AUTHOR = {Keelin Murphy and van Ginneken, Bram and Joseph M. Reinhardt and Sven Kabus and Kai Ding and Xiang Deng and Kunlin Cao and Kaifang Du and Gary E. Christensen and Vincent Garcia and Tom Vercauteren and Nicholas Ayache and Olivier Commowick and Gregoire Malandain and Ben Glocker and Nikos Paragios and Nassir Navab and Vladlena Gorbunova and Jon Sporring and de Bruijne, Marleen and Xiao Han and Mattias P. Heinrich and Julia A. Schnabel and Mark Jenkinson and Cristian Lorenz and Marc Modat and Jamie R. McClelland and Sebastien Ourselin and Sascha E.A. Muenzing and Max A. Viergever and Dante De Nigris and D. Louis Collins and Tal Arbel and Marta Peroni and Rui Li and Gregory C. Sharp and Alexander Schmidt-Richberg and Jan Ehrhardt and Rene Werner and Dirk Smeets and Dirk Loeckx and Gang Song and Nicholas Tustison and Brian Avants and James C. Gee and Marius Staring and Stefan Klein and Berend C. Stoel and Martin Urschler and Manuel Werlberger and Jef Vandemeulebroucke and Simon Rit and David Sarrut and Josien P.W. Pluim}, JOURNAL = {IEEE Trans Med Imaging}, MONTH = {November}, OPTNOTE = {}, NUMBER = {11}, PAGES = {1901-20}, TITLE = {Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge}, VOLUME = {30}, YEAR = {2011}, ABSTRACT = {EMPIRE10 (Evaluation of Methods for Pulmonary Image REgistration 2010) is a public platform for fair and meaningful comparison of registration algorithms which are applied to a database of intrapatient thoracic CT image pairs. Evaluation of nonrigid registration techniques is a nontrivial task. This is compounded by the fact that researchers typically test only on their own data, which varies widely. For this reason, reliable assessment and comparison of different registration algorithms has been virtually impossible in the past. In this work we present the results of the launch phase of EMPIRE10, which comprised the comprehensive evaluation and comparison of 20 individual algorithms from leading academic and industrial research groups. All algorithms are applied to the same set of 30 thoracic CT pairs. Algorithm settings and parameters are chosen by researchers expert in the configuration of their own method and the evaluation is independent, using the same criteria for all participants. All results are published on the EMPIRE10 website (http://empire10.isi.uu.nl). The challenge remains ongoing and open to new participants. Full results from 24 algorithms have been published at the time of writing. This paper details the organization of the challenge, the data and evaluation methods and the outcome of the initial launch with 20 algorithms. The gain in knowledge and future work are discussed.}, DOI = {10.1109/TMI.2011.2158349}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PMID = {21632295}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://www.hal.inserm.fr/inserm-00607794}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Pernod:CG:2011, AUTHOR = {E. Pernod and M. Sermesant and E. Konukoglu and J. Relan and H. Delingette and N. Ayache}, JOURNAL = {Computers and Graphics}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {431--440}, TITLE = {A Multi-Front Eikonal Model of Cardiac Electrophysiology for Interactive Simulation of Radio-Frequency Ablation}, VOLUME = {35}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/CG-VCBM-2011.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616180}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Pohl:Neurosurgery:11, AUTHOR = {K.M Pohl and E. Konukoglu and S. Novellas and N. Ayache and A. Fedorov and I.-F. Talos and A. Golby and W.M. Wells and R. Kikinis and P.M. Black}, JOURNAL = {Neurosurgery}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {225-33}, PUBLISHER = {EDK France}, TITLE = {A New Metric for Detecting Change in Slowly Evolving Brain Tumors: Validation in Meningioma Patients}, VOLUME = {68(1 Suppl Operative)}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Kilian.Pohl/pohl-Neurosurgery-2011.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616196}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Pop:TBME:2011, AUTHOR = {M. Pop and M. Sermesant and T. Mansi and E. Crystal and S. Ghate and J. Peyrat and I. Lashevsky and Beiping Qiang and E. McVeigh and N. Ayache and G.A. Wright}, JOURNAL = {Biomedical Engineering, IEEE Transactions on}, MONTH = {dec.}, OPTNOTE = {}, NUMBER = {12}, PAGES = {3483-3486}, TITLE = {Correspondence Between Simple 3-D MRI-Based Computer Models and In-Vivo EP Measurements in Swine With Chronic Infarctions}, VOLUME = {58}, YEAR = {2011}, OPTABSTRACT = {}, DOI = {10.1109/TBME.2011.2168395}, OPTISBN = {}, ISSN = {0018-9294}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/IEEE_TBME_Mihaela2011.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813802}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Relan:IF:2011, AUTHOR = {Jatin Relan and Phani Chinchapatnam and Maxime Sermesant and Kawal Rhode and Matt Ginks and Hervé Delingette and C. Aldo Rinaldi and Reza Razavi and Nicholas Ayache}, JOURNAL = {Journal of the Royal Society Interface Focus}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {3}, PAGES = {396--407}, TITLE = {Coupled Personalization of Cardiac Electrophysiology Models for Prediction of Ischaemic Ventricular Tachycardia}, VOLUME = {1}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jatin.Relan/RSFS-2010-0041_Manuscript.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616188}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Relan:TBME:11, AUTHOR = {Jatin Relan and Mihaela Pop and Hervé Delingette and Graham Wright and Nicholas Ayache and Maxime Sermesant}, JOURNAL = {IEEE Transactions on Bio-Medical Engineering}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {12}, PAGES = {3339--3349}, TITLE = {Personalisation of a Cardiac Electrophysiology Model using Optical Mapping and MRI for Prediction of Changes with Pacing}, VOLUME = {58}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jatin.Relan/TBME-00761-2010-R2-preprint.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616184}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {English} } @ARTICLE{Sermesant:CCIR:11, AUTHOR = {Kawal Rhode and Maxime Sermesant}, JOURNAL = {Current Cardiovascular Imaging Reports}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {116-126}, TITLE = {Modeling and Registration for Electrophysiology Procedures Based on Three-Dimensional Imaging}, VOLUME = {4}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/ModelRegistrationEP.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616181}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Smith:IF:2011, AUTHOR = {N. Smith and de Vecchi, A. and M. McCormick and D. Nordsletten and O. Camara and A.F. Frangi and H. Delingette and M. Sermesant and J. Relan and N. Ayache and M. W. Krueger and W. Schulze and R. Hose and I. Valverde and P. Beerbaum and C. Staicu and M. Siebes and J. Spaan and P. Hunter and J. Weese and H. Lehmann and D. Chapelle and R. Razavi}, JOURNAL = {Journal of the Royal Society Interface Focus}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {3}, PAGES = {349--364}, PUBLISHER = {The Royal Society}, TITLE = {euHeart: Personalized and integrated cardiac care using patient-specific cardiovascular modelling}, VOLUME = {1}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, ISSN = {2042-8898}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/FOCUSsmith2011.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616189}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Ohman:VisualComputer:11, AUTHOR = {C. Öhman and D. M. Espino and T. Heimann and M. Baleani and H. Delingette and M. Viceconti}, JOURNAL = {The Visual Computer}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {153--159}, TITLE = {Subject-specific knee joint model: Design of an experiment to validate a multi-body finite element model}, VOLUME = {27}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/Ohman_et_al_Vis_comput_11.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {IT}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616200}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Delingette:RABIPA:10, OPTADDRESS = {}, AUTHOR = {T. Heimann and Hervé Delingette}, BOOKTITLE = {Biomedical Image Processing}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Thomas Martin Deserno}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {Model-based segmentation}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, ISBN = {978-3-642-15815-5}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/members/Herve.Delingette/Publications/Delingette-RABIPA-2010.pdf}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {DE}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616063}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{menze_11_image-based, OPTADDRESS = {}, AUTHOR = {B H Menze and E Stretton and E Konukoglu and N. Ayache}, BOOKTITLE = {Optimal control in image processing}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {C S Garbe and R Rannacher and U Platt and T Wagner}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Springer, Heidelberg/Germany}, OPTSERIES = {}, TITLE = {Image-based modeling of tumor growth in patients with glioma.}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://people.csail.mit.edu/menze/papers/menze_11_image-based.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00825866}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{cohen:rn:2010, AUTHOR = {M Cohen and C Lebrun and D Aufauvre and S Chanalet and C Filleau-Bertogliatti and W Camu and P Thomas and G Malandain and P Clavelou}, JOURNAL = {Rev Neurol (Paris)}, MONTH = {November}, NOTE = {[In French]}, NUMBER = {11}, PAGES = {894-900}, TITLE = {[Longitudinal study of health related quality of life in multiple sclerosis: correlation with MRI parameters]}, VOLUME = {166}, YEAR = {2010}, ABSTRACT = {INTRODUCTION: Health related quality of life (HRQOL) is often affected in multiple sclerosis (MS). Nevertheless, to our knowledge, there is no longitudinal study in the literature about the correlation between MRI parameters and HRQOL in MS patients. METHODS: We included 28 patients with clinically definite relapsing remitting MS. All patients initiated subcutaneous interferon beta-1a therapy. To assess HRQOL, we used the SEP-59 scale, the French validated translation of MSQOL-54, and the MusiQoL scale. Conventional MRI was performed every year. Lesion load (LL) and brain atrophy were automatically measured using SepINRIA, a free software developed by INRIA in Sophia Antipolis. RESULTS: The mean EDSS score was 1.7 and disease duration was 2.5 years. Our results revealed that HRQOL was significantly correlated to T1 and T2-LL with both SEP-59 and MusiQoL scales. T1-LL was better correlated with physical dimensions and T2-LL was better correlated with mental components. At 1-year follow-up, patients whose MRI showed either an increase of T1 LL or at least one gadolinium enhancing lesion had a worse HRQOL at the end of the study. Initial brain parenchymal fraction (BPF) measure was also correlated with the long-term follow-up HRQOL. EDSS scored at the end of the study had not significantly changed (1.3; P>0.05). CONCLUSION: Our study revealed pertinent clinicoradiological correlations between HRQOL and MRI parameters in our cohort.}, DOI = {10.1016/j.neurol.2010.06.002}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Adolescent, Adult, Atrophy, Brain, pathology, Cognition, physiology, Contrast Media, Disease Progression, Female, Gadolinium, Humans, Image Processing Computer-Assisted, Interferon Type I, therapeutic use, Longitudinal Studies, Magnetic Resonance Imaging, Male, Middle Aged, Multiple Sclerosis Chronic Progressive, pathology, Neuropsychological Tests, Quality of Life, Recombinant Proteins, Young Adult}, OPTURL = {}, OPTURL-PUBLISHER = {}, PMID = {20728910}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813767}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Delingette:DocSciences:2010, AUTHOR = {Hervé Delingette and Maxime Sermesant}, JOURNAL = {Doc Sciences}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {26-33}, TITLE = {Le coeur numérique}, VOLUME = {13}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {no}, X-INTERNATIONAL-AUDIENCE = {no}, X-PAYS = {}, X-SCIENTIFIC-POPULARIZATION = {yes}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{fernandez:nm:2010, AUTHOR = {Romain Fernandez and Pradeep Das and Vincent Mirabet and Eric Moscardi and Jan Traas and Jean-Luc Verdeil and Grégoire Malandain and Christophe Godin}, JOURNAL = {Nature Methods}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {7}, PAGES = {547-553}, TITLE = {Imaging plant growth in 4-D: robust tissue reconstruction and lineaging at cell resolution}, VOLUME = {7}, YEAR = {2010}, ABSTRACT = {Acquiring quantitative information on growing organs is an absolute requirement for a better understanding of morphogenesis in both plants and animals. However, detailed analyses of growth patterns at cellular resolution have remained elusive. To address this, we have designed a novel protocol where we image whole organs from multiple angles, and then computationally merge and segment these images to provide accurate cell identification within high-resolution 3-D reconstructions. We then extend this protocol to study growing organs in 4-D by using a temporal series of such reconstructions to automatically track cell lineages through multiple rounds of cell division during organ development. Using these methods, we carry out quantitative analyses of Arabidopsis flower development at cell resolution, and reveal differential growth patterns of key regions during the early stages of floral morphogenesis that were previously inaccessible. Lastly, using rice roots, we demonstrate that our approach is both generic and scalable.}, DOI = {10.1038/nmeth.1472}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/fernandez-nm-2010.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.archives-ouvertes.fr/hal-00521491}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{galanaud:ajnr:2010, AUTHOR = {Damien Galanaud and Stéphane Haik and Marius George Linguraru and Jean-Philippe Ranjeva and Baptiste Faucheux and Elsa Kaphan and Nicholas Ayache and Jacques Chiras and Patrick Cozzone and Didier Dormont and Jean-Philippe Brandel}, JOURNAL = {AJNR. American journal of neuroradiology}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {7}, PAGES = {1311-8}, TITLE = {Combined diffusion imaging and MR Spectroscopy in Human Prion Diseases}, VOLUME = {31}, YEAR = {2010}, ABSTRACT = {BACKGROUND AND PURPOSE: The physiopathologic bases underlying the signal intensity changes and reduced diffusibility observed in prion diseases (TSEs) are still poorly understood. We evaluated the interest of MRS combined with DWI both as a diagnostic tool and a way to understand the mechanism underlying signal intensity and ADC changes in this setting. MATERIALS AND METHODS: We designed a prospective study of multimodal MR imaging in patients with suspected TSEs. Forty-five patients with a suspicion of TSE and 11 age-matched healthy volunteers were included. The MR imaging protocol included T1, FLAIR, and DWI sequences. MRS was performed on the cerebellum, pulvinar, right lenticular nucleus, and frontal cortex. MR images were assessed visually, and ADC values were calculated. RESULTS: Among the 45 suspected cases, 31 fulfilled the criteria for probable or definite TSEs (19 sCJDs, 3 iCJDs, 2 vCJDs, and 7 genetic TSEs); and 14 were classified as AltDs. High signals in the cortex and/or basal ganglia were observed in 26/31 patients with TSEs on FLAIR and 29/31 patients on DWI. In the basal ganglia, high DWI signals corresponded to a decreased ADC. Metabolic alterations, increased mIns, and decreased NAA were observed in all patients with TSEs. ADC values and metabolic changes were not correlated; this finding suggests that neuronal stress (vacuolization), neuronal loss, and astrogliosis do not alone explain the decrease of ADC. CONCLUSIONS: MRS combined with other MR imaging is of interest in the diagnosis of TSE and provides useful information for understanding physiopathologic processes underlying prion diseases.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Linguraru/Galanaud-et-al-AJNR2010.pdf}, URL-PUBLISHER = {http://www.ajnr.org/content/31/7/1311.abstract}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Gianni:PTAMPES:10, AUTHOR = {D. Gianni and S. McKeever and T. Yu and R. Britten and Hervé Delingette and A. Frangi and P. Hunter and Nic Smith}, JOURNAL = {Philos Transact of the Royal Society A Mathematical Physical Engineering Sciences}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {3039--3056}, TITLE = {Sharing and reusing cardiovascular anatomical models over the Web: a step towards the implementation of the virtual physiological human project}, VOLUME = {368}, YEAR = {2010}, OPTABSTRACT = {}, DOI = {10.1098/rsta.2010.0025}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/members/Herve.Delingette/Publications/CardiacModelsDatabase.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {GB,ES}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616110}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Konukoglu:MEDIA:09, AUTHOR = {Ender Konukoglu and Olivier Clatz and Pierre-Yves Bondiau and Hervé Delingette and Nicholas Ayache}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, PAGES = {111-125}, TITLE = {Extrapolating Glioma Invasion Margin in Brain Magnetic Resonance Images: Suggesting New Irradiation Margins}, VOLUME = {14}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Ender.Konukoglu/MEDIA2009_konukoglu_extrapolation.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616107}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Konukoglu:TMI:09, AUTHOR = {Ender Konukoglu and Olivier Clatz and Bjoern H. Menze and Marc-André Weber and Bram Stieltjes and Emmanuel Mandonnet and Hervé Delingette and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1}, PAGES = {77-95}, TITLE = {Image Guided Personalization of Reaction-Diffusion Type Tumor Growth Models Using Modified Anisotropic Eikonal Equations}, VOLUME = {29}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Ender.Konukoglu/TMI2009_konukoglu_InverseProblem.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {DE,US}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616100}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Lorenzi:NBoA:10, AUTHOR = {Marco Lorenzi and Michael Donohue and Donata Paternico and Cristina Scarpazza and Susanne Ostrowitzki and Olivier Blin and Elaine Irving and G. Frisoni}, JOURNAL = {Neurobiology of Aging}, MONTH = {August}, NOTE = {Special Issue on ADNI}, OPTNUMBER = {}, PAGES = {1443-51}, TITLE = {Enrichment through biomarkers in clinical trials of Alzheimer's drugs in patients with mild cognitive impairment}, OPTVOLUME = {}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Marco.Lorenzi/Lorenzi_NBoA_2010.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {IT}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813773}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Marchesseau:PBMB:10, AUTHOR = {Stéphanie Marchesseau and T. Heimann and Simon Chatelin and Rémy Willinger and Hervé Delingette}, JOURNAL = {Progress in Biophysics and Molecular Biology}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2-3}, PAGES = {185-196}, TITLE = {Fast porous visco-hyperelastic soft tissue model for surgery simulation: application to liver surgery}, VOLUME = {103}, YEAR = {2010}, OPTABSTRACT = {}, DOI = {10.1016/j.pbiomolbio.2010.09.005}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Stephanie.Marchesseau/PBMB-Marchesseau-2010.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.archives-ouvertes.fr/hal-00593223}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Toussaint:MAGMA:10, AUTHOR = {Markand D. Patel and Nicolas Toussaint and Geoffrey D. Charles-Edwards and Jean-Pierre Lin and Philip G. Batchelor}, JOURNAL = {Magnetic Resonance Materials in Physics, Biology and Medicine}, MONTH = {February}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, TITLE = {Distribution and Fibre Field Similarity Mapping of the Human Anterior Commissure Fibres by Diffusion Tensor Imaging}, OPTVOLUME = {}, YEAR = {2010}, OPTABSTRACT = {}, DOI = {10.1007/s10334-010-0201-3}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicolas.Toussaint/Toussaint.MAGMA.10.pdf}, OPTURL-PUBLISHER = {}, PMID = {20229087}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {GB}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Peyrat:TMI:2010, AUTHOR = {Jean-Marc Peyrat and Hervé Delingette and Maxime Sermesant and Chenyang Xu and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {July}, OPTNOTE = {}, NUMBER = {7}, PAGES = {1351-1368}, TITLE = {Registration of 4D Cardiac CT Sequences Under Trajectory Constraints With Multichannel Diffeomorphic Demons}, VOLUME = {29}, YEAR = {2010}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2009.2038908}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jean-Marc.Peyrat/Peyrat_2010_TMI.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {US}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616101}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Ramus:CancerRadiother:2010, AUTHOR = {Liliane Ramus and Juliette Thariat and Pierre-Yves Marcy and Yoann Pointreau and Guillaume Bera and Olivier Commowick and Grégoire Malandain}, JOURNAL = {Cancer radiothérapie}, OPTMONTH = {}, NOTE = {In French}, NUMBER = {3}, PAGES = {206-12}, TITLE = {Outils de contourage, utilisation et construction d'atlas anatomiques : exemples des cancers de la tete et du cou}, VOLUME = {14}, YEAR = {2010}, ABSTRACT = {Highly conformal irradiation techniques are associated with steep gradient doses. Accuracy and reproducibility of delineation are required to avoid geometric misses and to properly report dose-volume effects on organs at risk. Guidelines of the International Commission on Radiation Units have largely contributed to high quality treatments. The ICRU endeavors to collect and evaluate the latest data and information pertinent to the problems of radiation measurement and dosimetry. There remains a need for delineation guidelines and automatic segmentation tools in routine practice. Among these tools, atlas-based segmentation has been shown to provide promising results. The methodology used for head and neck cancer patients is illustrated.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Liliane.Ramus/cancerRadiotherapie10_lramus.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {no}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616098}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Riklin-Raviv:MedIA:2010, AUTHOR = {Tammy Riklin-Raviv and Van Leemput, Koen and Bjoern H. Menze and William M. Wells and Polina Golland}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {5}, PAGES = {654-65}, TITLE = {Segmentation of image ensembles via latent atlases}, VOLUME = {14}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://people.csail.mit.edu/polina/papers/RiklinRaviv-MedIA-2010.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {US}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Yeo:TMI:10, AUTHOR = {Boon Thye Thomas Yeo and Mert Sabuncu and Tom Vercauteren and Nicholas Ayache and Bruce Fischl and Polina Golland}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {March}, NOTE = {PMID:19709963}, NUMBER = {3}, PAGES = {650--668}, TITLE = {Spherical Demons: Fast Diffeomorphic Landmark-Free Surface Registration}, VOLUME = {29}, YEAR = {2010}, ABSTRACT = {We present the Spherical Demons algorithm for registering two spherical images. By exploiting spherical vector spline interpolation theory, we show that a large class of regularizors for the modified Demons objective function can be efficiently approximated on the sphere using iterative smoothing. Based on one parameter subgroups of diffeomorphisms, the resulting registration is diffeomorphic and fast. The Spherical Demons algorithm can also be modified to register a given spherical image to a probabilistic atlas. We demonstrate two variants of the algorithm corresponding to warping the atlas or warping the subject. Registration of a cortical surface mesh to an atlas mesh, both with more than 160k nodes requires less than 5 minutes when warping the atlas and less than 3 minutes when warping the subject on a Xeon 3.2GHz single processor machine. This is comparable to the fastest non-diffeomorphic landmarkfree surface registration algorithms. Furthermore, the accuracy of our method compares favorably to the popular FreeSurfer registration algorithm. We validate the technique in two different applications that use registration to transfer segmentation labels onto a new image: (1) parcellation of in-vivo cortical surfaces and (2) Brodmann area localization in ex-vivo cortical surfaces.}, DOI = {10.1109/TMI.2009.2030797}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://people.csail.mit.edu/ythomas/publications/2010SphericalDemons-TMI.pdf}, URL-PUBLISHER = {http://sites.google.com/site/yeoyeo02/software/sphericaldemonsrelease}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {US}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616102}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Konukoglu:MCM:2010, OPTADDRESS = {}, AUTHOR = {Ender Konukoglu and Olivier Clatz and Hervé Delingette and Nicholas Ayache}, BOOKTITLE = {Multiscale Cancer Modeling}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Thomas S. Deisboeck and Georgios Stamatakos}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {CRC Press}, SERIES = {Chapman & Hall/CRC Mathematical & Computational Biology}, TITLE = {Personalization of Reaction-Diffusion Tumor Growth Models in MR Images: Application to Brain Gliomas Characterization and Radiotherapy Planning}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Ender.Konukoglu/nih-cvit-chapter.pdf}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616111}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Sermesant:CRTbook:2010, OPTADDRESS = {}, AUTHOR = {Maxime Sermesant and Reza Razavi}, BOOKTITLE = {Patient-Specific Modeling of the Cardiovascular System}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Roy C.P. Kerckhoffs}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {167-182}, PUBLISHER = {Springer New York}, OPTSERIES = {}, TITLE = {Personalized Computational Models of the Heart for Cardiac Resynchronization Therapy}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2010}, OPTABSTRACT = {}, DOI = {10.1007/978-1-4419-6691-9_10}, ISBN = {978-1-4419-6691-9}, OPTISSN = {}, KEYWORDS = {Life Sciences}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {GB}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616112}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Arsigny:JMIV:09, AUTHOR = {Vincent Arsigny and Olivier Commowick and Nicholas Ayache and Xavier Pennec}, JOURNAL = {Journal of Mathematical Imaging and Vision}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, PAGES = {222-238}, TITLE = {A Fast and Log-Euclidean Polyaffine Framework for Locally Linear Registration}, VOLUME = {33}, YEAR = {2009}, OPTABSTRACT = {}, DOI = {10.1007/s10851-008-0135-9}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Arsigny_JMIV_polyaffine.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616084}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{bardinet:jn:2009, AUTHOR = {Éric Bardinet and Manik Bhattacharjee and Didier Dormont and Bernard Pidoux and Grégoire Malandain and Michael Schupbach and Nicholas Ayache and Philippe Cornu and Yves Agid and Jerome Yelnik}, JOURNAL = {Journal of Neurosurgery}, MONTH = {February}, OPTNOTE = {}, NUMBER = {2}, PAGES = {208-19}, TITLE = {A three-dimensional histological atlas of the human basal ganglia. II. Atlas deformation strategy and evaluation in deep brain stimulation for Parkinson disease.}, VOLUME = {110}, YEAR = {2009}, ABSTRACT = {OBJECT: The localization of any given target in the brain has become a challenging issue because of the increased use of deep brain stimulation to treat Parkinson disease, dystonia, and nonmotor diseases (for example, Tourette syndrome, obsessive compulsive disorders, and depression). The aim of this study was to develop an automated method of adapting an atlas of the human basal ganglia to the brains of individual patients. METHODS: Magnetic resonance images of the brain specimen were obtained before extraction from the skull and histological processing. Adaptation of the atlas to individual patient anatomy was performed by reshaping the atlas MR images to the images obtained in the individual patient using a hierarchical registration applied to a region of interest centered on the basal ganglia, and then applying the reshaping matrix to the atlas surfaces. RESULTS: Results were evaluated by direct visual inspection of the structures visible on MR images and atlas anatomy, by comparison with electrophysiological intraoperative data, and with previous atlas studies in patients with Parkinson disease. The method was both robust and accurate, never failing to provide an anatomically reliable atlas to patient registration. The registration obtained did not exceed a 1-mm mismatch with the electrophysiological signatures in the region of the subthalamic nucleus. CONCLUSIONS: This registration method applied to the basal ganglia atlas forms a powerful and reliable method for determining deep brain stimulation targets within the basal ganglia of individual patients. }, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Basal Ganglia, pathology, Brain Mapping, methods, Deep Brain Stimulation, methods, Humans, Image Interpretation Computer-Assisted, methods, Imaging Three-Dimensional, methods, Magnetic Resonance Imaging, methods, Medical Illustration, Microelectrodes, Microscopy, Parkinson Disease, pathology, Red Nucleus, pathology, Sensitivity and Specificity, Substantia Nigra, pathology, Subthalamic Nucleus, pathology}, URL = {https://www-sop.inria.fr/asclepios/Publications/Bardinet/bardinet-jn-2008.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616085}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Brun:NeuroImage:09, AUTHOR = {Caroline Brun and Natasha Leporé and Xavier Pennec and Agatha D Lee and Marina Barysheva and Sarah K Madsen and Christina Avedissian and Yi-Yu Chou and de Zubicaray, Greig I. and Katie McMahon and Margaret Wright and Arthur W. Toga and Paul M. Thompson}, JOURNAL = {NeuroImage}, MONTH = {October}, OPTNOTE = {}, NUMBER = {1}, PAGES = {37-49}, TITLE = {Mapping the Regional Influence of Genetics on Brain Structure Variability - A Tensor-Based Morphometry Study}, VOLUME = {48}, YEAR = {2009}, OPTABSTRACT = {}, DOI = {10.1016/j.neuroimage.2009.05.022}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2859973/pdf/nihms126680.pdf}, OPTURL-PUBLISHER = {}, PMID = {19446645}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {US,AU}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{desai:ijrr:2009, AUTHOR = {Jaydev P. Desai and Nicholas Ayache}, JOURNAL = {International Journal of Robotics Research}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {9}, PAGES = {1099-1100}, TITLE = {Editorial: Special Issue on Medical Robotics}, VOLUME = {28}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications-tracked/Nicholas.Ayache/AyacheRobotics.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616092}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Durrleman:Media:09, AUTHOR = {Stanley Durrleman and Xavier Pennec and Alain Trouvé and Nicholas Ayache}, JOURNAL = {Medical Image Analysis}, MONTH = {October}, OPTNOTE = {}, NUMBER = {5}, PAGES = {793-808}, TITLE = {Statistical Models on Sets of Curves and Surfaces based on Currents}, VOLUME = {13}, YEAR = {2009}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2009.07.007}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Stanley.Durrleman/Durrleman_MedIA_09.pdf}, OPTURL-PUBLISHER = {}, PMID = {19679507}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Hufnagel:MIM:09, AUTHOR = {Heike Hufnagel and Jan Ehrhardt and Xavier Pennec and Nicholas Ayache and Heinz Handels}, JOURNAL = {Methods of Information in Medicine}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {4}, PAGES = {314-319}, TITLE = {Computation of a Probabilistic Statistical Shape Model in a Maximum-a-posteriori Framework}, VOLUME = {48}, YEAR = {2009}, OPTABSTRACT = {}, DOI = {10.3414/ME9228}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Heike.Hufnagel/Hufnagel_MIM09.pdf}, OPTURL-PUBLISHER = {}, PMID = {19562228}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {DE}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Klein:NeuroImage:09, AUTHOR = {Arno Klein and Jesper Andersson and Babak A. Ardekani and John Ashburner and Brian Avants and Ming-Chang Chiang and Gary E. Christensen and D. Louis Collins and Pierre Hellier and Joo Hyun Song and Mark Jenkinson and Claude Lepage and Daniel Rueckert and Paul M. Thompson and Tom Vercauteren and Roger P. Woods and J. John Mann and Ramin V. Parsey}, JOURNAL = {NeuroImage}, MONTH = {July}, OPTNOTE = {}, NUMBER = {3}, PAGES = {786--802}, TITLE = {Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration}, VOLUME = {46}, YEAR = {2009}, OPTABSTRACT = {}, DOI = {10.1016/j.neuroimage.2008.12.037}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tom.Vercauteren/Eval14NonlinearRegistration-Klein-NeuroImage09.pdf}, URL-PUBLISHER = {http://www.mindboggle.info/papers/}, PMID = {19195496}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {US,GB,CA}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://www.hal.inserm.fr/inserm-00360790}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Nicolau:Media:09, AUTHOR = {S. Nicolau and Xavier Pennec and Luc Soler and X. Buy and A. Gangi and Nicholas Ayache and J. Marescaux}, JOURNAL = {Medical Image Analysis}, MONTH = {June}, OPTNOTE = {}, NUMBER = {3}, PAGES = {494--506}, TITLE = {An Augmented Reality System for Liver Thermal Ablation: Design and Evaluation on Clinical Cases}, VOLUME = {13}, YEAR = {2009}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2009.02.003}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Nicolau_MEDIA_09.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Pop:2009:MedIA, AUTHOR = {Mihaela Pop and Maxime Sermesant and D Lepiller and M V Truong and Elliot McVeigh and Eugene Crystal and Alexander Dick and Hervé Delingette and Nicholas Ayache and Graham Wright}, JOURNAL = {Medical Image Analysis}, MONTH = {April}, OPTNOTE = {}, NUMBER = {2}, PAGES = {370-80}, TITLE = {Fusion of optical imaging and MRI for the evaluation and adjustment of macroscopic models of cardiac electrophysiology: A feasibility study}, VOLUME = {13}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/MEDIA2008Pop.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {GB,US,CA}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616087}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{sims:ro:2009, AUTHOR = {R Sims and A Isambert and V Gregoire and F Bidault and L Fresco and J Sage and J Mills and J Bourhis and D Lefkopoulos and Olivier Commowick and M Benkebil and Grégoire Malandain}, JOURNAL = {Radiotherapy Oncology}, MONTH = {December}, OPTNOTE = {}, NUMBER = {3}, PAGES = {474-8}, TITLE = {A pre-clinical assessment of an atlas-based automatic segmentation tool for the head and neck}, VOLUME = {93}, YEAR = {2009}, ABSTRACT = {BACKGROUND AND PURPOSE: Accurate conformal radiotherapy treatment requires manual delineation of target volumes and organs at risk (OAR) that is both time-consuming and subject to large inter-user variability. One solution is atlas-based automatic segmentation (ABAS) where a priori information is used to delineate various organs of interest. The aim of the present study is to establish the accuracy of one such tool for the head and neck (H&N) using two different evaluation methods. MATERIALS AND METHODS: Two radiotherapy centres were provided with an ABAS tool that was used to outline the brainstem, parotids and mandible on several patients. The results were compared to manual delineations for the first centre (EM1) and reviewed/edited for the second centre (EM2), both of which were deemed as equally valid gold standards. The contours were compared in terms of their volume, sensitivity and specificity with the results being interpreted using the Dice similarity coefficient and a receiver operator characteristic (ROC) curve. RESULTS: Automatic segmentation took typically approximately 7min for each patient on a standard PC. The results indicated that the atlas contour volume was generally within +/-1SD of each gold standard apart from the parotids for EM1 and brainstem for EM2 that were over- and under-estimated, respectively (within +/-2SD). The similarity of the atlas contours with their respective gold standard was satisfactory with an average Dice coefficient for all OAR of 0.68+/-0.25 for EM1 and 0.82+/-0.13 for EM2. All data had satisfactory sensitivity and specificity resulting in a favourable position in ROC space. CONCLUSIONS: These tests have shown that the ABAS tool exhibits satisfactory sensitivity and specificity for the OAR investigated. There is, however, a systematic over-segmentation of the parotids (EM1) and under-segmentation of the brainstem (EM2) that require careful review and editing in the majority of cases. Such issues have been discussed with the software manufacturer and a revised version is due for release.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/sims-ro-2009.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {GB,BE,CA}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616090}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Souplet:RevNeurol:09, AUTHOR = {Jean-Christophe Souplet and Christine Lebrun and Stéphane Chanalet and Nicholas Ayache and Grégoire Malandain}, JOURNAL = {Revue Neurologique}, OPTMONTH = {}, NOTE = {In french}, NUMBER = {1}, PAGES = {7--14}, TITLE = {Revue des approches de segmentation des lésions de sclérose en plaques dans les séquences conventionnelles IRM}, VOLUME = {165}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jean-Christophe.Souplet/souplet-rn-2009.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {no}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Vercauteren:NeuroImage:09, AUTHOR = {Tom Vercauteren and Xavier Pennec and Aymeric Perchant and Nicholas Ayache}, JOURNAL = {NeuroImage}, MONTH = {March}, OPTNOTE = {}, NUMBER = {1, Supp.1}, PAGES = {S61--S72}, TITLE = {Diffeomorphic Demons: Efficient Non-parametric Image Registration}, VOLUME = {45}, YEAR = {2009}, OPTABSTRACT = {}, DOI = {10.1016/j.neuroimage.2008.10.040}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tom.Vercauteren/DiffeoDemons-NeuroImage08-Vercauteren.pdf}, OPTURL-PUBLISHER = {}, PMID = {19041946}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inserm-00349600/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Yeo:TMI:09, AUTHOR = {Boon Thye Thomas Yeo and Tom Vercauteren and Pierre Fillard and Jean-Marc Peyrat and Xavier Pennec and Polina Golland and Nicholas Ayache and Olivier Clatz}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {December}, NOTE = {PMID:19556193}, NUMBER = {12}, PAGES = {1914--1928}, TITLE = {DT-REFinD: Diffusion Tensor Registration with Exact Finite-Strain Differential}, VOLUME = {28}, YEAR = {2009}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2009.2025654}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://people.csail.mit.edu/ythomas/publications/2009DTI-TMI.pdf}, URL-PUBLISHER = {http://sites.google.com/site/yeoyeo02/software/dt-refindcode}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {US}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00502720/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{ayache:kahn:2009, OPTADDRESS = {}, AUTHOR = {Nicholas Ayache and Olivier Clatz and Hervé Delingette and Grégoire Malandain and Xavier Pennec and Maxime Sermesant}, BOOKTITLE = {From semantics to computer science: essays in honor of Gilles Kahn}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Y. Bertot and G. Huet and J.-J. Lévy and G. Plotkin}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {415-436}, PUBLISHER = {Cambridge University Press}, OPTSERIES = {}, TITLE = {Asclepios: a Research Project-Team at INRIA for the Analysis and Simulation of Biomedical Images}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/Colloquium-Gilles-Kahn-NA-2007-v5.pdf}, URL-PUBLISHER = {http://www.cambridge.org/catalogue/catalogue.asp?isbn=9780521518253}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616094}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Germain:HRCG:09, OPTADDRESS = {}, AUTHOR = {C. Germain-Renaud and V. Breton and P. Clarysse and B. Delhay and Y. Gaudeau and T. Glatard and E. Jannot and Y. Legré and Johan Montagnat and J.-M. Moureau and A. Osorio and Xavier Pennec and J. Schaerer and R. Texier}, BOOKTITLE = {Handbook of Research on Computational Grid Technologies for Life Sciences, Biomedicine, and Healthcare}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Mario Cannataro}, OPTMONTH = {}, NOTE = {IGI-Global Medical Information Science Discoveries Research Award 2009}, OPTNUMBER = {}, PAGES = {363-391}, PUBLISHER = {IGI Global}, OPTSERIES = {}, TITLE = {Grid Analysis of Radiological Data}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2009}, OPTABSTRACT = {}, DOI = {10.4018/978-1-60566-374-6.ch019}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.igi-global.com/Bookstore/Chapter.aspx?TitleId=35703}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.archives-ouvertes.fr/hal-00683992}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Mansi:3DPH:08, OPTADDRESS = {}, AUTHOR = {Tommaso Mansi and Barbara André and Michael Lynch and Maxime Sermesant and Hervé Delingette and Younes Boudjemline and Nicholas Ayache}, BOOKTITLE = {Recent Advances in the 3D Physiological Human}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Nadia Magnenat-Thalmann and Jian J. Zhang and David D. Feng}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {201-210}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {Virtual Pulmonary Valve Replacement Interventions with a Personalised Cardiac Electromechanical Model}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, ISBN = {978-1-84882-564-2}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tommaso.Mansi/mansi093DPH.pdf}, OPTURL-PUBLISHER = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616095}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Schmid:3DPH:08, OPTADDRESS = {}, AUTHOR = {Jérôme Schmid and Anders Sandholm and François Chung and Daniel Thalmann and Hervé Delingette and Nadia Magnenat-Thalmann}, BOOKTITLE = {Recent Advances in the 3D Physiological Human}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Nadia Magnenat-Thalmann and Jian J. Zhang and David D. Feng}, MONTH = {February}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {3-19}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {Musculoskeletal simulation model generation from MRI datasets and motion capture data}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, ISBN = {978-1-84882-564-2}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Francois.Chung/musculoskeletal_simulation_model_generation_from_mri_datasets_and_motion_capture_data.pdf}, OPTURL-PUBLISHER = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {CH}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616096}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Seiler:3DPH:09, OPTADDRESS = {}, AUTHOR = {Christof Seiler and P. Büchler and L.-P. Nolte and R. Paulsen and Mauricio Reyes}, BOOKTITLE = {Recent Advances in the 3D Physiological Human}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {N. Magnenat-Thalmann, J. J. Zhang and D. D. Feng}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {133-148}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {Hierarchical Markov Random Fields Applied to Model Soft Tissue Deformations on Graphics Hardware}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, ISBN = {978-1-84882-564-2}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813746}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Archip:Neurosurgery:08, AUTHOR = {Neculai Archip and Olivier Clatz and Stephen Whalen and Simon Dimaio and Peter Black and Alexandra Golby and Ferenc Jolesz and Simon Warfield}, JOURNAL = {Neurosurgery}, MONTH = {March}, OPTNOTE = {}, NUMBER = {3 supl. 1}, PAGES = {209-15}, TITLE = {Compensation of geometric distortion effects on intraoperative magnetic resonance imaging for enhanced visualization in image-guided neurosurgery}, VOLUME = {62}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616076}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Boisvert:TBME:08, AUTHOR = {Jonathan Boisvert and Farida Cheriet and Xavier Pennec and Hubert Labelle and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Bio-Medical Engineering}, MONTH = {November}, OPTNOTE = {}, NUMBER = {11}, PAGES = {2565--2574}, TITLE = {Articulated Spine Models for 3D Reconstruction from Partial Radiographic Data}, VOLUME = {55}, YEAR = {2008}, OPTABSTRACT = {}, DOI = {10.1109/TBME.2008.2001125}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Boisvert-TBME08.pdf}, OPTURL-PUBLISHER = {}, PMID = {18990626}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {CA}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616069}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Boisvert:TMI:08, AUTHOR = {Jonathan Boisvert and Farida Cheriet and Xavier Pennec and Hubert Labelle and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {4}, PAGES = {557--568}, TITLE = {Geometric Variability of the Scoliotic Spine using Statistics on Articulated Shape Models}, VOLUME = {27}, YEAR = {2008}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2007.911474}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Boisvert.TMI08.pdf}, OPTURL-PUBLISHER = {}, PMID = {18390352}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {CA}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616070}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Boisvert:ELCVIA:08, AUTHOR = {Jonathan Boisvert and Farida Cheriet and Xavier Pennec and Hubert Labelle and Nicholas Ayache}, JOURNAL = {Electronic Letters on Computer Vision and Image Analysis}, MONTH = {December}, OPTNOTE = {}, NUMBER = {4}, PAGES = {13--31}, TITLE = {Principal Deformations Modes of Articulated Models for the Analysis of 3D Spine Deformities}, VOLUME = {7}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jonathan.Boisvert/Boisvert_ELCVIA08.pdf}, URL-PUBLISHER = {http://elcvia.cvc.uab.es/index.php/elcvia/article/view/165/202}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {CA}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616067}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{bondiau:pmb:08, AUTHOR = {Pierre-Yves Bondiau and Olivier Clatz and Maxime Sermesant and Pierre-Yves Marcy and Hervé Delingette and Marc Frenay and Nicholas Ayache}, JOURNAL = {Physics in Medicine and Biology}, MONTH = {February}, OPTNOTE = {}, NUMBER = {4}, PAGES = {879-93}, TITLE = {Biocomputing: numerical simulation of glioblastoma growth using diffusion tensor imaging}, VOLUME = {53}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/PMB2008Bondiau.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616078}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{TMI2008Phani, AUTHOR = {P. Chinchapatnam and K.S. Rhode and M. Ginks and C.A. Rinaldi and P. Lambiase and R. Razavi and S. Arridge and M. Sermesant}, JOURNAL = {IEEE Transactions on Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {11}, PAGES = {1631-1642}, TITLE = {Model-Based Imaging of Cardiac Apparent Conductivity and Local Conduction Velocity for Diagnosis and Planning of Therapy}, VOLUME = {27}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/TMI2008Phani.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616071}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{commowick:mia:2008, AUTHOR = {Olivier Commowick and Vincent Arsigny and Aurélie Isambert and Jimena Costa and Frédéric Dhermain and François Bidault and Pierre-Yves Bondiau and Nicholas Ayache and Grégoire Malandain}, JOURNAL = {Medical Image Analysis}, MONTH = {August}, OPTNOTE = {}, NUMBER = {4}, PAGES = {427-41}, TITLE = {An efficient locally affine framework for the smooth registration of anatomical structures}, VOLUME = {12}, YEAR = {2008}, ABSTRACT = {Intra-subject and inter-subject nonlinear registration based on dense transformations requires the setting of many parameters, mainly for regularization. This task is a major issue, as the global quality of the registration will depend on it. Setting these parameters is, however, very hard, and they may have to be tuned for each patient when processing data acquired by different centers or using different protocols. Thus, we present in this article a method to introduce more coherence in the registration by using fewer degrees of freedom than with a dense registration. This is done by registering the images only on user-defined areas, using a set of affine transformations, which are optimized together in a very efficient manner. Our framework also ensures a smooth and coherent transformation thanks to a new regularization of the affine components. Finally, we ensure an invertible transformation thanks to the Log-Euclidean polyaffine framework. This allows us to get a more robust and very efficient registration method, while obtaining good results as explained below. We performed a qualitative and quantitative evaluation of the obtained results on two applications: first on atlas-based brain segmentation, comparing our results with a dense registration algorithm. Then the second application for which our framework is particularly well suited concerns bone registration in the lower-abdomen area. We obtain in this case a better positioning of the femoral heads than with a dense registration. For both applications, we show a significant improvement in computation time, which is crucial for clinical applications.}, DOI = {10.1016/j.media.2008.01.002}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Algorithms, Brain, anatomy & histology, Diagnostic Imaging, methods, Humans, Image Processing Computer-Assisted, Radiotherapy Planning Computer-Assisted, methods, Sensitivity and Specificity}, URL = {https://www-sop.inria.fr/asclepios/Publications/Olivier.Commowick/CommowickMedia2008.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616074}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Commowick_RO_2008, AUTHOR = {Olivier Commowick and Vincent Grégoire and Grégoire Malandain}, JOURNAL = {Radiotherapy Oncology}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, PAGES = {281-289}, TITLE = {Atlas-Based Delineation of Lymph Node Levels in Head and Neck Computed Tomography Images}, VOLUME = {87}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Olivier.Commowick/CommowickRO2008.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616080}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{delingette:tvcg:2008, AUTHOR = {H. Delingette}, JOURNAL = {IEEE Transactions on Visualization and Computer Graphics}, MONTH = {March/April}, OPTNOTE = {}, NUMBER = {2}, OPTPAGES = {}, TITLE = {Triangular Springs for Modeling Nonlinear Membranes}, VOLUME = {14}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/tvcg-membrane.pdf}, URL-PUBLISHER = {http://doi.ieeecomputersociety.org/10.1109/TVCG.2007.70431}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616072}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Durrleman:Media:08, AUTHOR = {Stanley Durrleman and Xavier Pennec and Alain Trouvé and Paul Thompson and Nicholas Ayache}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {5}, PAGES = {626--637}, TITLE = {Inferring brain variability from diffeomorphic deformations of currents: an integrative approach}, VOLUME = {12}, YEAR = {2008}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2008.06.010}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Stanley.Durrleman/Durrleman_Media08.pdf}, OPTURL-PUBLISHER = {}, PMID = {18658005}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {US}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00816052}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{glatard-montagnat-etal:2007b, AUTHOR = {Tristan Glatard and Johan Montagnat and David Emsellem and Diane Lingrand}, JOURNAL = {Future Generation Computer Systems}, MONTH = {July}, OPTNOTE = {}, NUMBER = {24}, PAGES = {720--730}, TITLE = {A Service-Oriented Architecture enabling dynamic services grouping for optimizing distributed workflows execution}, VOLUME = {7}, YEAR = {2008}, OPTABSTRACT = {}, DOI = {10.1016/j.future.2008.02.011}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.archives-ouvertes.fr/hal-00459808}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Glatard:IJHPCA:08, AUTHOR = {Tristan Glatard and Johan Montagnat and Diane Lingrand and Xavier Pennec}, JOURNAL = {International Journal of High Performance Computing Applications}, MONTH = {August}, NOTE = {Special issue on Workflow Systems in Grid Environments}, NUMBER = {22}, PAGES = {347--360}, TITLE = {Flexible and efficient workflow deployment of data-intensive applications on GRIDS with MOTEUR}, VOLUME = {3}, YEAR = {2008}, OPTABSTRACT = {}, DOI = {10.1177/1094342008096067}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://rainbow.polytech.unice.fr/publis/glatard-montagnat-etal:2008.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{haik:an:2008, AUTHOR = {S Haik and D Galanaud and MG Linguraru and K Peoc'h and N Privat and BA Faucheux and N Ayache and JJ Hauw and D Dormont and JP Brandel}, JOURNAL = {Archives of Neurology}, MONTH = {April}, OPTNOTE = {}, NUMBER = {4}, PAGES = {545-549}, TITLE = {In Vivo Detection of Thalamic Gliosis: A Pathoradiologic Demonstration in Familial Fatal Insomnia}, VOLUME = {65}, YEAR = {2008}, ABSTRACT = {BACKGROUND: Increasing evidence supports the usefulness of brain magnetic resonance imaging (MRI) for the diagnosis of human prion diseases. From the neuroradiological point of view, fatal familial insomnia is probably the most challenging to diagnose because brain lesions are mostly confined to the thalamus. OBJECTIVE: To determine whether multisequence MRI of the brain can show thalamic alterations and establish pathoradiologic correlations in a patient with familial fatal insomnia. DESIGN: Radioclinical prospective study. We describe a patient with fatal familial insomnia and normal MRI images. Because the MRI study was performed only 4 days before the patient's death, we were able to compare radiological data with the lesions observed at the neuropathologic level. Patient A 55-year-old man with familial fatal insomnia. Main Outcome Measure Magnetic resonance spectroscopy combined with the measurement of apparent diffusion coefficient of water in different brain areas. RESULTS: The neuroradiological study showed, in the thalamus but not in the other brain regions studied, an increase of apparent diffusion coefficient of water and a metabolic pattern indicating gliosis. These alterations closely correlated with neuropathologic data showing an almost pure gliosis that was restricted to the thalami. CONCLUSION: Considering fatal familial insomnia as a model of thalamic-restricted gliosis, this case demonstrates that multisequences of magnetic resonance can detect prion-induced gliosis in vivo, as confirmed by a neuropathologic examination performed only a few days after radiological examination.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/HaikAN2008.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616065}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Hufnagel:ijcars:2008, AUTHOR = {H. Hufnagel and X. Pennec and J. Ehrhardt and N. Ayache and H. Handels}, JOURNAL = {International Journal for Computer Assisted Radiology and Surgery}, MONTH = {March}, OPTNOTE = {}, NUMBER = {5}, PAGES = {265--273}, TITLE = {Generation of a Statistical Shape Model with Probabilistic Point Correspondences and EM-ICP}, VOLUME = {2}, YEAR = {2008}, OPTABSTRACT = {}, DOI = {10.1007/s11548-007-0138-9}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Heike.Hufnagel/hufnagel_IJCARS.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {DE}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616073}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{isambert:cr:2008, AUTHOR = {A Isambert and G Bonniaud and F Lavielle and G Malandain and D Lefkopoulos}, JOURNAL = {Cancer radiothérapie}, MONTH = {December}, OPTNOTE = {}, NUMBER = {8}, PAGES = {800-8}, TITLE = {A phantom study of the accuracy of CT, MR and PET image registrations with a block matching-based algorithm}, VOLUME = {12}, YEAR = {2008}, ABSTRACT = {PURPOSE: The aim of the present study was to quantitatively assess the performance of a block matching-based automatic registration algorithm integrated within the commercial treatment planning system designated ISOgray from Dosisoft. The accuracy of the process was evaluated by a phantom study on computed tomography (CT), magnetic resonance (MR) and positron emission tomography (PET) images. MATERIALS AND METHODS: Two phantoms were used to carry out this study: the cylindrical Jaszczak phantom and the anthropomorphic Liqui-Phil Head Phantom (the Phantom Laboratory), containing fillable spheres. External fiducial markers were used to quantify the accuracy of 41 CT/CT, MR/CT and PET/CT automatic registrations with images of the rotated and tilted phantoms. RESULTS: The study first showed that a cylindrical phantom was not adapted for the evaluation of the performance of a block matching-based registration software. Secondly, the Liqui-Phil Head Phantom study showed that the algorithm was able to perform automatic registrations of CT/CT and MR/CT images with differences of up to 40 degrees in phantom rotation and of up to 20-30 degrees for PET/CT with accuracy below the image voxel size. CONCLUSION: The study showed that the block matching-based automatic registration software under investigation was robust, reliable and yielded very satisfactory results. This phantom-based test can be integrated into a periodical quality assurance process and used for any commissioning of image registration software for radiation therapy.}, DOI = {10.1016/j.canrad.2008.04.009}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Algorithms, Automation, Brain, pathology, Head, Humans, Magnetic Resonance Imaging, methods, Phantoms Imaging, Positron-Emission Tomography, methods, Radiotherapy Planning Computer-Assisted, methods, Software, Tomography X-Ray Computed, methods}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/isambert-cr-2008.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616066}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{isambert:ro:2008, AUTHOR = {Aurélie Isambert and Frédéric Dhermain and François Bidault and Olivier Commowick and Pierre-Yves Bondiau and Grégoire Malandain and Dimitri Lefkopoulos}, JOURNAL = {Radiotherapy Oncology}, MONTH = {April}, OPTNOTE = {}, NUMBER = {1}, PAGES = {93-9}, TITLE = {Evaluation of an atlas-based automatic segmentation software for the delineation of brain organs at risk in a radiation therapy clinical context}, VOLUME = {87}, YEAR = {2008}, ABSTRACT = {BACKGROUND AND PURPOSE: Conformal radiation therapy techniques require the delineation of volumes of interest, a time-consuming and operator-dependent task. In this work, we aimed to evaluate the potential interest of an atlas-based automatic segmentation software (ABAS) of brain organs at risk (OAR), when used under our clinical conditions. MATERIALS AND METHODS: Automatic and manual segmentations of the eyes, optic nerves, optic chiasm, pituitary gland, brain stem and cerebellum of 11 patients on T1-weighted magnetic resonance, 3-mm thick slice images were compared using the Dice similarity coefficient (DSC). The sensitivity and specificity of the ABAS were also computed and analysed from a radiotherapy point of view by splitting the ROC (Receiver Operating Characteristic) space into four sub-regions. RESULTS: Automatic segmentation of OAR was achieved in 7-8 min. Excellent agreement was obtained between automatic and manual delineations for organs exceeding 7 cm3: the DSC was greater than 0.8. For smaller structures, the DSC was lower than 0.41. CONCLUSIONS: These tests demonstrated that this ABAS is a robust and reliable tool for automatic delineation of large structures under clinical conditions in our daily practice, even though the small structures must continue to be delineated manually by an expert.}, DOI = {10.1016/j.radonc.2007.11.030}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Algorithms, Brain Neoplasms, pathology, Female, Humans, Image Interpretation Computer-Assisted, methods, Magnetic Resonance Imaging, Male, Middle Aged, ROC Curve, Retrospective Studies, Software, Tomography X-Ray Computed}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/isambert-ro-2008.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616079}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Mandonnet:NSR:08, AUTHOR = {Emmanuel Mandonnet and Johan Pallud and Olivier Clatz and Hugues Duffau and Laurent Capelle}, JOURNAL = {Neurosurgical Review}, MONTH = {July}, OPTNOTE = {}, NUMBER = {3}, PAGES = {263-9}, TITLE = {Computational Modelling of the WHO Grade II Glioma Dynamics: Principles and Applications to Surgical Strategy}, VOLUME = {31}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616077}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Montagnat:JGC:2008, AUTHOR = {Johan Montagnat and Tristan Glatard and Campos Plasencia, Isabel and Francisco Castejon and Xavier Pennec and Giuliano Taffoni and Vladimir Voznesensky and Claudio Vuerli}, JOURNAL = {Journal of Grid Computing}, MONTH = {December}, OPTNOTE = {}, NUMBER = {4}, PAGES = {369-383}, TITLE = {Workflow-based data parallel applications on the EGEE production grid infrastructure}, VOLUME = {6}, YEAR = {2008}, OPTABSTRACT = {}, DOI = {10.1007/s10723-008-9108-x}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {ES,IT,RU}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.archives-ouvertes.fr/hal-00683983}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{rutgers:aajn:2008, AUTHOR = {D R Rutgers and P Fillard and G Paradot and M Tadie and P Lasjaunias and D Ducreux}, JOURNAL = {AJNR. American journal of neuroradiology}, MONTH = {October}, OPTNOTE = {}, NUMBER = {9}, PAGES = {1730-5}, TITLE = {Diffusion tensor imaging characteristics of the corpus callosum in mild, moderate, and severe traumatic brain injury}, VOLUME = {29}, YEAR = {2008}, ABSTRACT = {BACKGROUND AND PURPOSE: The corpus callosum is an important predilection site for traumatic axonal injury but may be unevenly affected in head trauma. We hypothesized that there were local differences in axonal injury within the corpus callosum as investigated with diffusion tensor imaging (DTI), varying among patients with differing severity of traumatic brain injury (TBI). MATERIALS AND METHODS: Ethics committee approval and informed consent were obtained. Ten control subjects (7 men, 3 women; mean age, 37 +/- 9 years) and 39 patients with TBI (27 men, 12 women; 34 +/- 12 years) were investigated, of whom 24 had mild; 9, moderate; and 6, severe TBI. Regions of interest were selected in the callosal genu, body, and splenium to calculate fractional anisotropy (FA), apparent diffusion coefficient (ADC), and the number of fibers passing through. Statistical comparison was made through analysis of variance with the Scheffe post hoc analysis. RESULTS: Compared with controls, patients with mild TBI investigated <3 months posttrauma (n = 12) had reduced FA (P < .01) and increased ADC (P < .05) in the genu, whereas patients with mild TBI investigated > or =3 months posttrauma (n = 12) showed no significant differences. Patients with moderate and severe TBI, all investigated <3 months posttrauma, had reduced FA (P < .001) and increased ADC (P < .01) in the genu compared with controls and reduced FA in the splenium (P < .001) without significant ADC change. CONCLUSION: Mild TBI is associated with DTI abnormalities in the genu <3 months posttrauma. In more severe TBI, both the genu and splenium are affected. DTI suggests a larger contribution of vasogenic edema in the genu than in the splenium in TBI.}, DOI = {10.3174/ajnr.A1213}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Adult, Anisotropy, Brain Concussion, diagnosis, Brain Injuries, diagnosis, Corpus Callosum, injuries, Diffuse Axonal Injury, diagnosis, Diffusion Magnetic Resonance Imaging, Female, Follow-Up Studies, Humans, Image Processing Computer-Assisted, Male, Middle Aged, Nerve Fibers, pathology, Young Adult}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00502705}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{rutgers:aajn:2008:b, AUTHOR = {D R Rutgers and F Toulgoat and J Cazejust and P Fillard and P Lasjaunias and D Ducreux}, JOURNAL = {AJNR. American journal of neuroradiology}, MONTH = {March}, OPTNOTE = {}, NUMBER = {3}, PAGES = {514-9}, TITLE = {White matter abnormalities in mild traumatic brain injury: a diffusion tensor imaging study}, VOLUME = {29}, YEAR = {2008}, ABSTRACT = {BACKGROUND AND PURPOSE: Traumatic axonal injury is a primary brain abnormality in head trauma and is characterized by reduction of fractional anisotropy (FA) on diffusion tensor imaging (DTI). Our hypothesis was that patients with mild traumatic brain injury (TBI) have widespread brain white matter regions of reduced FA involving a variety of fiber bundles and show fiber disruption on fiber tracking in a minority of these regions. MATERIALS AND METHODS: Ethics committee approval and informed consent were obtained. Twenty-one patients with mild TBI were investigated (men:women, 12:9; mean age +/- SD, 32 +/- 9 years). In a voxel-based comparison with 11 control subjects (men:women, 8:3; mean age, 37 +/- 9 years) using z score analysis, patient regions with abnormally reduced FA were defined in brain white matter. MR imaging, DTI, and fiber tracking characteristics of these regions were described and analyzed using Pearson correlation, linear regression analysis, or the chi(2) test when appropriate. RESULTS: Patients had on average 9.1 regions with reduced FA, with a mean region volume of 525 mm(3), predominantly found in cerebral lobar white matter, cingulum, and corpus callosum. These regions mainly involved supratentorial projection fiber bundles, callosal fibers, and fronto-temporo-occipital association fiber bundles. Internal capsules and infratentorial white matter were relatively infrequently affected. Of all of the involved fiber bundles, 19.3% showed discontinuity on fiber tracking. CONCLUSION: Patients with mild TBI have multiple regions with reduced FA in various white matter locations and involving various fiber bundles. A minority of these fiber bundles show discontinuity on fiber tracking.}, DOI = {10.3174/ajnr.A0856}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Adult, Brain, pathology, Brain Injuries, pathology, Demyelinating Diseases, pathology, Diffusion Magnetic Resonance Imaging, methods, Female, Humans, Male, Nerve Fibers Myelinated, pathology, Reproducibility of Results, Sensitivity and Specificity}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00502701}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Sermesant:2008:Heart-Fail-Clin:18598981, AUTHOR = {M Sermesant and J M Peyrat and P Chinchapatnam and F Billet and T Mansi and K Rhode and H Delingette and R Razavi and N Ayache}, JOURNAL = {Heart Failure Clinics}, MONTH = {July}, OPTNOTE = {}, NUMBER = {3}, PAGES = {289-301}, TITLE = {Toward patient-specific myocardial models of the heart}, VOLUME = {4}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/HFC2008Sermesant.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616068}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Konukoglu:HMIP:08, OPTADDRESS = {}, AUTHOR = {Ender Konukoglu and Xavier Pennec and Olivier Clatz and Nicholas Ayache}, BOOKTITLE = {Handbook of Medical Image Processing and Analysis - New edition}, CHAPTER = {18}, OPTEDITION = {}, EDITOR = {I. Bankman}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {297--307}, PUBLISHER = {Academic Press}, OPTSERIES = {}, TITLE = {Tumor Growth Modeling in Oncological Image Analysis}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, ISBN = {13: 978-0-12-373904-9}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Ender.Konukoglu/tumor_growth_in_image_analysis.pdf}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616081}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Pennec:ETCV:08, OPTADDRESS = {}, AUTHOR = {X. Pennec}, BOOKTITLE = {Emerging Trends in Visual Computing}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Frank Nielsen}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {347--386}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Statistical computing on manifolds: from Riemannian geometry to computational anatomy}, OPTTYPE = {}, VOLUME = {5416}, YEAR = {2008}, OPTABSTRACT = {}, DOI = {DOI: 10.1007/978-3-642-00826-9_16}, ISBN = {978-3-642-00825-2}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec_ETVC08.pdf}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616104}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Pennec:HMIP:08, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Nicholas Ayache and Jean-Philippe Thirion}, BOOKTITLE = {Handbook of Medical Image Processing and Analysis - New edition}, CHAPTER = {34}, OPTEDITION = {}, EDITOR = {I. Bankman}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {565--578}, PUBLISHER = {Academic Press}, OPTSERIES = {}, TITLE = {Landmark-based registration using features identified through differential geometry}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, ISBN = {13: 978-0-12-373904-9}, OPTISSN = {}, KEYWORDS = {registration, matching, validation, uncertainty}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.HMIP08.pdf}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616082}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Vercauteren:MIALSA:08, OPTADDRESS = {}, AUTHOR = {Tom Vercauteren and Nicholas Ayache and Nicolas Savoire and Grégoire Malandain and Aymeric Perchant}, BOOKTITLE = {Microscopic Image Analysis for Life Science Applications}, CHAPTER = {19}, OPTEDITION = {}, EDITOR = {Jens Rittscher and Raghu Machiraju and Stephen T. C. Wong}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {441--463}, PUBLISHER = {Artech House}, OPTSERIES = {}, TITLE = {Processing of In Vivo Fibered Confocal Microscopy Video Sequences}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tom.Vercauteren/ProcessingInVivoFCM-Vercauteren-Chap19MIALSA08.pdf}, URL-PUBLISHER = {http://www.artechhouse.com/Detail.aspx?strIsbn=978-1-59693-236-4}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616083}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Angelini:CMIR:07, AUTHOR = {Elsa Angelini and Olivier Clatz and Emmanuel Mandonnet and Ender Konukoglu and Laurent Capelle and Hugues Duffau}, JOURNAL = {Current Medical Imaging Reviews}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {4}, PAGES = {262-176}, TITLE = {Glioma Dynamics and Computational Models: A Review of Segmentation, Registration, and In Silico Growth Algorithms and their Clinical Applications}, VOLUME = {3}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Olivier.Clatz/Angelini_Clatz_CMIR_2007.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616021}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Archip:NI:06, AUTHOR = {Neculai Archip and Olivier Clatz and Stephen Whalen and Dan Kacher and Andriy Fedorov and Andriy Kot and Nikos Chrisochoides and Ferenc Jolesz and Alexandra Golby and Peter Black and Simon Warfield}, JOURNAL = {NeuroImage}, MONTH = {April}, OPTNOTE = {}, NUMBER = {2}, PAGES = {609-24}, TITLE = {Non-rigid alignment of preoperative MRI, fMRI, and DT-MRI with intra-operative MRI for enhanced visualization and navigation in image-guided neurosurgery}, VOLUME = {35}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Olivier.Clatz/Archip-Clatz-Neuroimage.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616028}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Arsigny:Siam:07, AUTHOR = {Vincent Arsigny and Pierre Fillard and Xavier Pennec and Nicholas Ayache}, JOURNAL = {SIAM Journal on Matrix Analysis and Applications}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1}, PAGES = {328--347}, TITLE = {Geometric Means in a Novel Vector Space Structure on Symmetric Positive-Definite Matrices}, VOLUME = {29}, YEAR = {2007}, OPTABSTRACT = {}, DOI = {10.1137/050637996}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {DT-MRI, Tensors, Riemannian geometry, Lie groups, interpolation, Log-Euclidean metrics}, URL = {https://www-sop.inria.fr/asclepios/Publications/Vincent.Arsigny/Arsigny_SIAM_tensors_07.pdf}, URL-PUBLISHER = {http://www.siam.org/journals/simax/29-1/63799.html}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616031}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{audette:cas:2007, AUTHOR = {M. A. Audette and H. Delingette and A. Fuchs and O. Burgert and K. Chinzei}, JOURNAL = {Journal of Computer Aided Surgery}, MONTH = {January}, OPTNOTE = {}, NUMBER = {1}, PAGES = {43--52}, TITLE = {A topologically faithful, tissue-guided, spatially varying meshing strategy for computing patient-specific head models for endoscopic pituitary surgery simulation}, VOLUME = {12}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.informaworld.com/10.1080/10929080601167413}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615611}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Becker:GIE:07, AUTHOR = {Valentin Becker and Tom Vercauteren and von Weyern, Claus Hann and Christian Prinz and Roland M. Schmid and Alexander Meining}, JOURNAL = {Gastrointestinal Endoscopy}, MONTH = {November}, OPTNOTE = {}, NUMBER = {5}, PAGES = {1001--1007}, TITLE = {High Resolution Miniprobe-based Confocal Microscopy in Combination with Video-mosaicing}, VOLUME = {66}, YEAR = {2007}, OPTABSTRACT = {}, DOI = {10.1016/j.gie.2007.04.015}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PMID = {17767932}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616022}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Clatz:TBME:07, AUTHOR = {Olivier Clatz and Stéphane Litrico and Hervé Delingette and Philippe Paquis and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Bio-Medical Engineering}, MONTH = {April}, OPTNOTE = {}, NUMBER = {4}, PAGES = {755-758}, TITLE = {Dynamic Model of Communicating Hydrocephalus for Surgery Simulation}, VOLUME = {54}, YEAR = {2007}, OPTABSTRACT = {}, DOI = {10.1109/TBME.2006.890146}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Clatz/hydrocephalus_clatz.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00080553}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Dauguet:Neuroscience:2007, AUTHOR = {Julien Dauguet and Thierry Delzescaux and Françoise Condé and Jean-François Mangin and Nicholas Ayache and Philippe Hantraye and Vincent Frouin}, JOURNAL = {Journal of Neuroscience Methods}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1}, PAGES = {191-204}, TITLE = {Three-dimensional reconstruction of stained histological slices and 3D non-linear registration with in-vivo MRI for whole baboon brain}, VOLUME = {164}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Julien.Dauguet/dauguet07.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616027}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Fillard:NCNAM:2007, AUTHOR = {D. Ducreux and P. Fillard and D. Facon and A. Ozanne and J.-F. Lepeintre and J. Renoux and M. Tadié and P. Lasjaunias}, JOURNAL = {Neuroimaging Clinics of North America}, MONTH = {February}, OPTNOTE = {}, NUMBER = {1}, PAGES = {137-147}, TITLE = {Diffusion Tensor Magnetic Resonance Imaging and Fiber Tracking in Spinal Cord Lesions: Current and Future Indications}, VOLUME = {17}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00502689/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Fillard:NeuroImage:06, AUTHOR = {Pierre Fillard and Vincent Arsigny and Xavier Pennec and Kiralee M. Hayashi and Paul M. Thompson and Nicholas Ayache}, JOURNAL = {NeuroImage}, MONTH = {January}, NOTE = {Also as INRIA Research Report 5887, April 2006. PMID: 17113311}, NUMBER = {2}, PAGES = {639--650}, TITLE = {Measuring Brain Variability by Extrapolating Sparse Tensor Fields Measured on Sulcal Lines}, VOLUME = {34}, YEAR = {2007}, OPTABSTRACT = {}, DOI = {10.1016/j.neuroimage.2006.09.027}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Pierre.Fillard/Fillard.Neuroimage.2006.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00071381}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Fillard:TMI:2007, AUTHOR = {Pierre Fillard and Xavier Pennec and Vincent Arsigny and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {November}, OPTNOTE = {}, NUMBER = {11}, PAGES = {1472--1482}, TITLE = {Clinical DT-MRI Estimation, Smoothing and Fiber Tracking with Log-Euclidean Metrics}, VOLUME = {26}, YEAR = {2007}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2007.899173}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Pierre.Fillard/Fillard.TMI.2007.pdf}, OPTURL-PUBLISHER = {}, PMID = {18041263}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00502645/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Linguraru:ijccc:07, AUTHOR = {Marius G. Linguraru and González Ballester, Miguel A. and Nicholas Ayache}, JOURNAL = {International Journal of Computers, Communication and Control}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1}, PAGES = {26--36}, TITLE = {Deformable Atlases for the Segmentation of Internal Brain Nuclei in Magnetic Resonance Imaging}, VOLUME = {2}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://mglinguraru.googlepages.com/IJCCC2007.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616025}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Linguraru:BRJ:07, AUTHOR = {Marius George Linguraru and Tom Vercauteren and Reyes Aguirre, Mauricio and González Ballester, Miguel Ángel and Nicholas Ayache}, JOURNAL = {Brain Research Journal}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {4}, PAGES = {269--287}, PUBLISHER = {Nova Science Publishers}, TITLE = {Segmentation Propagation from Deformable Atlases for Brain Mapping and Analysis}, VOLUME = {1}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tom.Vercauteren/SegPropDefAtlas-BRJ07-Linguraru.pdf}, URL-PUBLISHER = {https://www.novapublishers.com/catalog/product_info.php?products_id=7148}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616020}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Peyrat:TMI:2007, AUTHOR = {Jean-Marc Peyrat and Maxime Sermesant and Xavier Pennec and Hervé Delingette and Chenyang Xu and Eliot R. McVeigh and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {November}, OPTNOTE = {}, NUMBER = {11}, PAGES = {1500-1514}, TITLE = {A Computational Framework for the Statistical Analysis of Cardiac Diffusion Tensors: Application to a Small Database of Canine Hearts}, VOLUME = {26}, YEAR = {2007}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2007.907286}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jean-Marc.Peyrat/Peyrat_2007_TMI.pdf}, OPTURL-PUBLISHER = {}, PMID = {18041265}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616023}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{pitiot:ijcv:2007, AUTHOR = {A. Pitiot and H. Delingette and P.M. Thompson}, JOURNAL = {International Journal of Computer Vision}, MONTH = {January}, OPTNOTE = {}, NUMBER = {1}, PAGES = {71-88}, TITLE = {Learning Shape Correspondence for n-D curves}, VOLUME = {71}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616024}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{reyes:pmb:2007, AUTHOR = {M Reyes and G Malandain and P M Koulibaly and M A Gonzalez-Ballester and J Darcourt}, JOURNAL = {Physics in Medicine and Biology}, MONTH = {June}, OPTNOTE = {}, NUMBER = {12}, PAGES = {3579-600}, TITLE = {Model-based respiratory motion compensation for emission tomography image reconstruction}, VOLUME = {52}, YEAR = {2007}, ABSTRACT = {In emission tomography imaging, respiratory motion causes artifacts in lungs and cardiac reconstructed images, which lead to misinterpretations, imprecise diagnosis, impairing of fusion with other modalities, etc. Solutions like respiratory gating, correlated dynamic PET techniques, list-mode data based techniques and others have been tested, which lead to improvements over the spatial activity distribution in lungs lesions, but which have the disadvantages of requiring additional instrumentation or the need of discarding part of the projection data used for reconstruction. The objective of this study is to incorporate respiratory motion compensation directly into the image reconstruction process, without any additional acquisition protocol consideration. To this end, we propose an extension to the maximum likelihood expectation maximization (MLEM) algorithm that includes a respiratory motion model, which takes into account the displacements and volume deformations produced by the respiratory motion during the data acquisition process. We present results from synthetic simulations incorporating real respiratory motion as well as from phantom and patient data.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/reyes-pmb-2007.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616030}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Thiberville:AJRCCM:06, AUTHOR = {Luc Thiberville and Sophie Moreno-Swirc and Tom Vercauteren and Eric Peltier and Charlotte Cavé and Bourg Heckly, Geneviève}, JOURNAL = {American journal of respiratory and critical care medicine}, MONTH = {January}, NOTE = {Chosen for the cover of the AJRCCM paper issue. PMID: 17023733}, NUMBER = {1}, PAGES = {22--31}, TITLE = {In Vivo Imaging of the Bronchial Wall Microstructure Using Fibered Confocal Fluorescence Microscopy}, VOLUME = {175}, YEAR = {2007}, OPTABSTRACT = {}, DOI = {10.1164/rccm.200605-684OC}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://ajrccm.atsjournals.org/cgi/reprint/175/1/22.pdf}, URL-PUBLISHER = {http://ajrccm.atsjournals.org/cgi/content/abstract/175/1/22}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inserm-00476448/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{yelnik:neuroimage:2007, AUTHOR = {Jérôme Yelnik and Eric Bardinet and Didier Dormont and Grégoire Malandain and Sébastien Ourselin and Dominique Tandé and Carine Karachi and Nicholas Ayache and Philippe Cornu and Yves Agid}, JOURNAL = {NeuroImage}, MONTH = {January}, OPTNOTE = {}, NUMBER = {2}, PAGES = {618-38}, TITLE = {A three-dimensional, histological and deformable atlas of the human basal ganglia. I. Atlas construction based on immunohistochemical and MRI data}, VOLUME = {34}, YEAR = {2007}, ABSTRACT = {This paper describes the construction of an atlas of the human basal ganglia. The successive steps of the construction were as follows. First a postmortem specimen was subjected to a MRI acquisition prior to extraction of the brain from the skull. The brain was then cryosectioned (70 mum thickness). One section out of ten (80 sections) was Nissl-stained with cresyl violet, another series of 80 sections was immunostained for the calcium binding protein calbindin. Contours of basal ganglia nuclei including their calbindin-stained functional subdivisions, fiber bundles and ventricles (n=80 structures) were traced from histological sections and digitized. A novelty of this atlas is the MRI acquisition, which represents the core data element of the study. MRI was used for the coregistration of the atlas data and permitted, through multimodal (Nissl, calbindin, images of cryosectioning, T1 and T2 MRI) and 3D optimization, the production of anatomically and geometrically consistent 3D surfaces, which can be sliced through any desired orientation. The atlas MRI is also used for its deformation to provide accurate conformation to the MRI of living patients, thus adding information at the histological level to the patient's MRI volume. This latter aspect will be presented in a forthcoming paper.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Bardinet/bardinet-ni-2007.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616029}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{malandain:geometry:2007, OPTADDRESS = {}, AUTHOR = {Grégoire Malandain}, BOOKTITLE = {Géométrie discrète et images numériques}, OPTCHAPTER = {}, OPTEDITION = {}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {371--379}, PUBLISHER = {Hermès}, SERIES = {Traités IC2}, TITLE = {Applications de la géométrie discrète en imagerie médicale}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Arsigny:MRM:06, AUTHOR = {Vincent Arsigny and Pierre Fillard and Xavier Pennec and Nicholas Ayache}, JOURNAL = {Magnetic Resonance in Medicine}, MONTH = {August}, OPTNOTE = {}, NUMBER = {2}, PAGES = {411-421}, TITLE = {Log-Euclidean Metrics for Fast and Simple Calculus on Diffusion Tensors}, VOLUME = {56}, YEAR = {2006}, OPTABSTRACT = {}, DOI = {10.1002/mrm.20965}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {DT-MRI, Tensors, Riemannian geometry, Lie groups, interpolation, Log-Euclidean metrics}, URL = {https://www-sop.inria.fr/asclepios/Publications/Arsigny/arsigny_mrm_2006.pdf}, OPTURL-PUBLISHER = {}, PMID = {16788917}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00502678/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{bensa:rn:2006, AUTHOR = {C Bensa and C Bertogliati and S Chanalet and G Malandain and P Bedoucha and C Lebrun}, JOURNAL = {Revue Neurologique}, MONTH = {December}, NOTE = {[In French]}, NUMBER = {12}, PAGES = {1221-31}, TITLE = {Early detection of cognitive impairment in relapsing-remitting multiple sclerosis: functional-anatomical correlations and longitudinal follow-up}, VOLUME = {162}, YEAR = {2006}, ABSTRACT = {Introduction. Cognitive impairment is frequent in relapsing remitting Multiple Sclerosis and is often diagnosed after disruption of occupational and social relations. METHODS: We studied at baseline a homogeneous population of 32 RRMS patients, diagnosed for less than 5 years, with spontaneous memory complaints, and 20 controls. Sixteen patients were followed for 2 years, combining physical examination, neuropsychological tests, and brain MRI. Neuropsychological tests used evaluated memory capacities, attentional capacities, executive functions, language, and visuo-constructive praxis. Lesion load on brain MRI was measured with semi-automatic segmentation procedures and manual control. RESULTS: Eighty percent of patients presented cognitive impairment, and this proportion was higher than that found in the literature. These disorders were more marked for verbal episodic memory, attention, and executive functions. Patients with brain MRI that initially fulfilled the Barkhof criteria and those with callous lesions had more memory disorders. No link between global T1 and T2 lesion loads and neuropsychological scores was found. A statistical link between posterior fossa lesions and attentional disorders was shown. In the longitudinal follow-up, patients had better performances in memory and attentional domains, and a lower number of cognitive domains with dysfunction for each patient. This improvement on neuropsychological tests, whereas EDSS levels were stable, underlined a possible test-retest effect. CONCLUSION: During the initial phase of the disease, most of the relapsing remitting patients present a mild cognitive impairment. Early detection, therapeutic propositions, and recognition of disorders are necessary.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615002}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{blondel:tmi:2006, AUTHOR = {Christophe Blondel and Grégoire Malandain and Régis Vaillant and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {May}, OPTNOTE = {}, NUMBER = {5}, PAGES = {653--663}, TITLE = {Reconstruction of Coronary Arteries from a Single Rotational X-Ray Projection Sequence}, VOLUME = {25}, YEAR = {2006}, ABSTRACT = {Cardiovascular diseases remain the primary cause of death in developed countries. In most cases, exploration of possibly underlying coronary artery pathologies is performed using X-ray coronary angiography. Current clinical routine in coronary angiography is directly conducted in 2-D projection images from several static viewing angles. However, for diagnosis and treatment purposes, coronary artery reconstruction is highly suitable. The purpose of this study is to provide physicians with a 3-D model of coronary arteries, e.g. for absolute three-dimensional measures for lesion assessment, instead of direct projective measures deduced from the images, which are highly dependent on the viewing angle. In this article, we propose a novel method to reconstruct coronary arteries from one single rotational X-ray projection sequence. As a side result, we also obtain an estimation of the coronary artery motion. Our method consists of 3 main consecutive steps: (1) 3-D reconstruction of coronary artery centerlines, including respiratory motion compensation, (2) coronary artery 4-D motion computation, and (3) 3-D tomographic reconstruction of coronary arteries, involving compensation for respiratory and cardiac motions. We present some experiments on clinical datasets, and the feasibility of a true 3-D Quantitative Coronary Analysis is demonstrated.}, DOI = {10.1109/TMI.2006.873224}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Angiocardiography, Coronarography, Image Motion Analysis, Image Reconstruction, Tomography}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/blondel-tmi-2006.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00614993}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{cassot:microcirculation:2006, AUTHOR = {Francis Cassot and Frederic Lauwers and Céline Fouard and Steffen Prohaska and Valerie Lauwers-Cances}, JOURNAL = {Microcirculation}, MONTH = {January}, OPTNOTE = {}, NUMBER = {1}, PAGES = {1-18}, TITLE = {A novel three-dimensional computer-assisted method for a quantitative study of microvascular networks of the human cerebral cortex}, VOLUME = {13}, YEAR = {2006}, ABSTRACT = {OBJECTIVE: Detailed information on microvascular network anatomy is a requirement for understanding several aspects of microcirculation, including oxygen transport, distributions of pressure, and wall shear stress in microvessels, regulation of blood flow, and interpretation of hemodynamically based functional imaging methods, but very few quantitative data on the human brain microcirculation are available. The main objective of this study is to propose a new method to analyze this microcirculation. METHODS: From thick sections of india ink-injected human brain, using confocal laser microscopy, the authors developed algorithms adapted to very large data sets to automatically extract and analyze center lines together with diameters of thousands of brain microvessels within a large cortex area. RESULTS: Direct comparison between the original data and the processed vascular skeletons demonstrated the high reliability of this method and its capability to manage a large amount of data, from which morphometry and topology of the cerebral microcirculation could be derived. CONCLUSIONS: Among the many parameters that can be analyzed by this method, the capillary size, the frequency distributions of diameters and lengths, the fractal nature of these networks, and the depth-related density of vessels are all vital features for an adequate model of cerebral microcirculation.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/hal-00308888/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{clatz:neurologies:06, AUTHOR = {Olivier Clatz and Emmanuel Mandonnet and Stéphane Chanalet and Christine Lebrun and Ender Konukoglu and Hervé Delingette and Nicholas Ayache and Pierre-Yves Bondiau}, JOURNAL = {Neurologies}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {93}, PAGES = {665-667}, TITLE = {Modèles Biomathématiques de Croissance Des Gliomes : Recherche en Informatique et Perspectives en Neuro-oncologie}, VOLUME = {9}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Clatz/clatz_neurologies.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00614999}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{colliot:2006:neuroimage, AUTHOR = {O. Colliot and T. Mansi and N. Bernasconi and V. Naessens and D. Klironomos and A. Bernasconi}, JOURNAL = {NeuroImage}, MONTH = {October}, OPTNOTE = {}, NUMBER = {4}, PAGES = {1621-1630}, TITLE = {Segmentation of focal cortical dysplasia lesions on MRI using level set evolution}, VOLUME = {32}, YEAR = {2006}, ABSTRACT = {Focal cortical dysplasia (FCD) is the most frequent malformation of cortical development in patients with medically intractable epilepsy. On MRI, FCD lesions are not easily differentiable from the normal cortex and defining their spatial extent is challenging. In this paper, we introduce a method to segment FCD lesions on T1-weighted MRI. It relies on two successive three-dimensional deformable models, whose evolutions are based on the level set framework. The first deformable model is driven by probability maps obtained from three MRI features: cortical thickness, relative intensity and gradient. These features correspond to the visual characteristics of FCD and allow discriminating lesions and normal tissues. In a second stage, the previous result is expanded towards the underlying and overlying cortical boundaries, throughout the whole cortical section. The method was quantitatively evaluated by comparison with manually traced labels in 18 patients with FCD. The automated segmentations achieved a strong agreement with the manuals labels, demonstrating the applicability of the method to assist the delineation of FCD lesions on MRI. This new approach may become a useful tool for the presurgical evaluation of patients with intractable epilepsy related to cortical dysplasia.}, DOI = {10.1016/j.neuroimage.2006.04.225}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tommaso.Mansi/colliot06.pdf}, URL-PUBLISHER = {http://www.sciencedirect.com/science/article/B6WNP-4KJDWX2-1/2/5e566226c5ecf099e5aed67c4cdb7c16}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00614998}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Delingette:PLS:06, AUTHOR = {Hervé Delingette and Nicholas Ayache}, JOURNAL = {Pour la science}, MONTH = {July}, OPTNOTE = {}, NUMBER = {52}, PAGES = {106-109}, TITLE = {La simulation de Chirurgie Hépatique}, VOLUME = {52}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Simulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/Simulation-Pour-La-Science.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Delingette:IEEEProc:06, AUTHOR = {Hervé Delingette and Xavier Pennec and Luc Soler and Jacques Marescaux and Nicholas Ayache}, JOURNAL = {Proceedings of the IEEE}, MONTH = {September}, OPTNOTE = {}, NUMBER = {9}, PAGES = {1678- 1688}, TITLE = {Computational Models for Image Guided, Robot-Assisted and Simulated Medical Interventions}, VOLUME = {94}, YEAR = {2006}, OPTABSTRACT = {}, DOI = {10.1109/JPROC.2006.880718}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/IEEE-proceedings-Robotics.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615001}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Ducreux:CancerRadiotherapy:06, AUTHOR = {Denis Ducreux and Frédéric Dhermain and Pierre Fillard}, JOURNAL = {Cancer radiothérapie}, MONTH = {November}, NOTE = {[In French]}, NUMBER = {6-7}, PAGES = {330-3}, TITLE = {[Functional MRI in brain tumours]}, VOLUME = {10}, YEAR = {2006}, ABSTRACT = {Functional MRI is a technique of imaging which is developing fast as it allows non-aggressive evaluation of brain functions. Diffusion, perfusion and activation are each used to study brain responsiveness to a given task. As a pretherapeutic routine investigation, in brain tumours, it can be helpful as an additional tool to morphological MRI in evaluating the prognosis of patients.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Brain, anatomy & histology, Brain Mapping, Brain Neoplasms, pathology, Humans, Magnetic Resonance Imaging, methods, Prognosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00502605}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Ducreux:AJNR:06, AUTHOR = {Denis Ducreux and Jean-Francois Lepeintre and Pierre Fillard and C. Loureiro and Marc Tadié and Pierre Lasjaunias}, JOURNAL = {AJNR. American journal of neuroradiology}, MONTH = {January}, OPTNOTE = {}, NUMBER = {1}, PAGES = {214-6}, TITLE = {MR diffusion tensor imaging and fiber tracking in 5 spinal cord astrocytomas}, VOLUME = {27}, YEAR = {2006}, ABSTRACT = {Spinal cord astrocytomas are rare neoplasms that can result in alteration of the spinal cord structural integrity, which can be assessed by using diffusion tensor imaging methods. Our objective was to visualize the deformation of the posterior spinal cord lemniscal and corticospinal tracts in 5 patients with low-grade astrocytomas compared with 10 healthy volunteers by using 3D fiber-tracking reconstructions.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Adult, Astrocytoma, diagnosis, Diffusion Magnetic Resonance Imaging, Female, Humans, Image Processing Computer-Assisted, Imaging Three-Dimensional, Male, Nerve Fibers, pathology, Spinal Cord, pathology, Spinal Cord Neoplasms, diagnosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00502663}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{fouard:tmi:2006, AUTHOR = {Céline Fouard and Grégoire Malandain and Steffen Prohaska and Malte Westerhoff}, JOURNAL = {IEEE Transactions on Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {10}, PAGES = {1319-1328}, TITLE = {Blockwise Processing Applied to Brain Microvascular Network Study}, VOLUME = {25}, YEAR = {2006}, ABSTRACT = {The study of cerebral microvascular networks requires high-resolution images. However, to obtain statistically relevant results, a large area of the brain (several square millimeters) must be analyzed. This leads us to consider huge images, too large to be loaded and processed at once in the memory of a standard computer. To consider a large area, a compact representation of the vessels is required. The medial axis is the preferred tool for this application. To extract it, a dedicated skeletonization algorithm is proposed. Numerous approaches already exist which focus on computational efficiency. However, they all implicitly assume that the image can be completely processed in the computer memory, which is not realistic with the large images considered here. We present in this paper a skeletonization algorithm that processes data locally (in subimages) while preserving global properties (i.e., homotopy). We then show some results obtained on a mosaic of three-dimensional images acquired by confocal microscopy.}, DOI = {10.1109/TMI.2006.880670}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/fouard-tmi-2006.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/hal-00308887/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Liberatore:JNeuroradiology:06, AUTHOR = {M. Liberatore and C. Denier and Pierre Fillard and M.C. Petit-Lacour and F. Benoudiba and Pierre Lasjaunias and Denis Ducreux}, JOURNAL = {J Neuroradiol}, MONTH = {June}, NOTE = {[In French]}, NUMBER = {3}, PAGES = {189-193}, TITLE = {[Diffusion tensor imaging and tractography of central pontine myelinolysis]}, VOLUME = {33}, YEAR = {2006}, ABSTRACT = {OBJECTIVES: To illustrate the value of diffusion tensor imaging and tractography in the diagnosis and follow-up of central pontine myelinolysis. CASE REPORT: We report a case of central pontine myelinolysis in a 29 year old woman, also anorexic, studied using MR Diffusion Tensor Imaging (DTI) and Fibre Tracking (FT) focused on the pons, and compared with the studies of 5 normal volunteers. Tractography showed a swollen aspect of the right corticospinal fiber tract correlating with mild left lower extremity deficit at clinical evaluation. The pontine fibers were posteriorly displaced but intact. The sensory tracts were also intact. Apparent Diffusion Coefficient values were increased and Fractional Anisotropy was decreased in the lesions. Follow up imaging showed persistent abnormal ADC and FA values in the pons although the left cortico-spinal tract returned to normal, consistent with the clinical outcome. CONCLUSION: Diffusion Tensor Imaging MR and Fiber tractography are a new method to analyse white matter tracts. It can be used to prospectively evaluate the location of white matter tract lesions at the acute phase of central pontine myelinolysis and follow up.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Adult, Anorexia, complications, Diffusion Magnetic Resonance Imaging, Female, Humans, Myelinolysis Central Pontine, diagnosis, Pyramidal Tracts, pathology}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00502681}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Linguraru:TMI:2006, AUTHOR = {M.G. Linguraru and N. Ayache and E. Bardinet and M.A. González Ballester and D. Galanaud and S. Haïk and B.A. Faucheux and J.J. Hauw and P. Cozzone and D. Dormont and J.P. Brandel}, JOURNAL = {IEEE Transactions on Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {8}, PAGES = {1052-1067}, TITLE = {Differentiation of sCJD and vCJD Forms by Automated Analysis of Basal Ganglia Intensity Distribution in Multisequence MRI of the Brain - Definition and Evaluation of New MRI-based Ratios}, VOLUME = {25}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Linguraru/Linguraru_TMI_2006.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/hal-00092290/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Linguraru:MedIA:2006, AUTHOR = {M.G. Linguraru and K. Marias and R. English and J.M. Brady}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {6}, OPTPAGES = {}, PUBLISHER = {Elsevier}, TITLE = {A Biologically Inspired Algorithm for Microcalcification Cluster Detection}, VOLUME = {10}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Linguraru/Linguraru_MEDIA_2006.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{moreau:ieeetbme06, AUTHOR = {Valérie Moreau-Villéger and Hervé Delingette and Maxime Sermesant and Hiroshi Ashikaga and Elliot McVeigh and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Bio-Medical Engineering}, MONTH = {August}, OPTNOTE = {}, NUMBER = {8}, PAGES = {1457-1466}, TITLE = {Building Maps of Local Apparent Conductivity of the Epicardium with a 2D Electrophysiological Model of the Heart}, VOLUME = {53}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Moreau/moreauIEEETBME05.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00614992}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Pennec:JMIV:06, AUTHOR = {Xavier Pennec}, JOURNAL = {Journal of Mathematical Imaging and Vision}, MONTH = {July}, NOTE = {A preliminary appeared as INRIA RR-5093, January 2004.}, NUMBER = {1}, PAGES = {127-154}, TITLE = {Intrinsic Statistics on Riemannian Manifolds: Basic Tools for Geometric Measurements}, VOLUME = {25}, YEAR = {2006}, OPTABSTRACT = {}, DOI = {10.1007/s10851-006-6228-4}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Fréchet means, Statistics, Lie groups, Riemannian geometry}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.JMIV06.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00614994}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Pennec:IJCV:06, AUTHOR = {Xavier Pennec and Pierre Fillard and Nicholas Ayache}, JOURNAL = {International Journal of Computer Vision}, MONTH = {January}, NOTE = {A preliminary version appeared as INRIA Research Report 5255, July 2004.}, NUMBER = {1}, PAGES = {41--66}, TITLE = {A Riemannian Framework for Tensor Computing}, VOLUME = {66}, YEAR = {2006}, ABSTRACT = { Tensors are nowadays a common source of geometric information. In this paper, we propose to endow the tensor space with an affine-invariant Riemannian metric. We demonstrate that it leads to strong theoretical properties: the cone of positive definite symmetric matrices is replaced by a regular and complete manifold without boundaries (null eigenvalues are at the infinity), the geodesic between two tensors and the mean of a set of tensors are uniquely defined, etc. We have previously shown that the Riemannian metric provides a powerful framework for generalizing statistics to manifolds. In this paper, we show that it is also possible to generalize to tensor fields many important geometric data processing algorithms such as interpolation, filtering, diffusion and restoration of missing data. For instance, most interpolation and Gaussian filtering schemes can be tackled efficiently through a weighted mean computation. Linear and anisotropic diffusion schemes can be adapted to our Riemannian framework, through partial differential evolution equations, provided that the metric of the tensor space is taken into account. For that purpose, we provide intrinsic numerical schemes to compute the gradient and Laplace-Beltrami operators. Finally, to enforce the fidelity to the data (either sparsely distributed tensors or complete tensors fields) we propose least-squares criteria based on our invariant Riemannian distance which are particularly simple and efficient to solve.}, DOI = {10.1007/s11263-005-3222-z}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Tensors, regularization, PDE, geometry, Riemannian geometry}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.IJCV05.pdf}, URL-PUBLISHER = {http://springerlink.metapress.com/openurl.asp?genre=article&issn=0920-5691&volume=66&issue=1&spage=41}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00614990}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{pitiot:media:2006, AUTHOR = {Alain Pitiot and Eric Bardinet and Paul M. Thompson and Grégoire Malandain}, JOURNAL = {Medical Image Analysis}, MONTH = {June}, OPTNOTE = {}, NUMBER = {3}, PAGES = {465--483}, TITLE = {Piecewise Affine Registration of Biological Images for Volume Reconstruction}, VOLUME = {10}, YEAR = {2006}, ABSTRACT = {This manuscript tackles the reconstruction of 3D volumes via mono-modal registration of series of 2D biological images (histological sections, autoradiographs, cryosections, etc.). The process of acquiring these images typically induces composite transformations that we model as a number of rigid or affine local transformations embedded in an elastic one. We propose a registration approach closely derived from this model. Given a pair of input images, we first compute a dense similarity field between them with a block matching algorithm. We use as a similarity measure an extension of the classical correlation coefficient that improves the consistency of the field. A hierarchical clustering algorithm then automatically partitions the field into a number of classes from which we extract independent pairs of sub-images. Our clustering algorithm relies on the Earth mover's distribution metric and is additionally guided by robust least-square estimation of the transformations associated with each cluster. Finally, the pairs of sub-images are, independently, affinely registered and a hybrid affine/non-linear interpolation scheme is used to compose the output registered image. We investigate the behavior of our approach on several batches of histological data and discuss its sensitivity to parameters and noise.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, clustering, reconstruction, histology, MRI}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/MedIA-WBIR-pitiot-etal.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{renoux:aajn:2006, AUTHOR = {J Renoux and D Facon and P Fillard and I Huynh and P Lasjaunias and D Ducreux}, JOURNAL = {AJNR. American journal of neuroradiology}, MONTH = {October}, OPTNOTE = {}, NUMBER = {9}, PAGES = {1947-51}, TITLE = {MR diffusion tensor imaging and fiber tracking in inflammatory diseases of the spinal cord}, VOLUME = {27}, YEAR = {2006}, ABSTRACT = {PURPOSE: Our aim was to study the fractional anisotropy (FA) variations and the fiber tracking (FT) patterns observed in patients with myelitis. MATERIAL AND METHODS: Fifteen patients with symptomatic myelitis and 11 healthy subjects were prospectively selected. We performed T2-weighted and diffusion tensor imaging on a 1.5T MR scanner. FA and apparent diffusion coefficient maps were computed in both healthy subjects and patients. In each patient, we performed FT to study pathologic aspects on this imaging method. FA data were analyzed by using z-scores. RESULTS: For the healthy subjects, averaged FA values ranged from 0.745 to 0.751. All abnormal areas seen on T2-weighted imaging had a significantly decreased FA value. In 9 patients (60%), FA maps showed decreased FA areas, whereas T2-weighted imaging findings were normal. These areas matched the neurologic deficit in 33%. Eighty percent of patients had multiple decreased FA areas. Five patients (33%) had increased FA values in normal T2-weighted areas. CONCLUSION: We observed specific FA and FT pattern variations in patients with myelitis.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Adult, Anisotropy, Diagnosis Differential, Diffusion Magnetic Resonance Imaging, Female, Humans, Image Enhancement, Image Processing Computer-Assisted, Male, Middle Aged, Multiple Sclerosis, diagnosis, Myelitis, diagnosis, Myelitis Transverse, diagnosis, Nerve Fibers, pathology, Neurologic Examination, Prospective Studies, Reference Values, Sarcoidosis, diagnosis, Spinal Cord, pathology}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00502684}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Scarella:CRAS:06, AUTHOR = {Gilles Scarella and Olivier Clatz and Stéphane Lanteri and Grégory Beaume and Steve Oudot and Jean-Philippe Pons and Serge Piperno and Patrick Joly and Joe Wiart}, JOURNAL = {Comptes Rendus de l'Académie des Sciences - Physics}, MONTH = {June}, OPTNOTE = {}, NUMBER = {5}, PAGES = {501-508}, TITLE = {Realistic numerical modelling of human head tissue exposure to electromagnetic waves from cellular phones}, VOLUME = {7}, YEAR = {2006}, ABSTRACT = {The ever-rising diffusion of cellular phones has brought about an increased concern for the possible consequences of electromagnetic radiation on human health. Possible thermal effects have been investigated, via experimentation or simulation, by several research projects in the last decade. Concerning numerical modeling, the power absorption in a user's head is generally computed using discretized models built from clinical MRI data. The vast majority of such numerical studies have been conducted using Finite Differences Time Domain methods, although strong limitations of their accuracy are due to heterogeneity, poor definition of the detailed structures of head tissues (staircasing effects), etc. In order to propose numerical modeling using Finite Element or Discontinuous Galerkin Time Domain methods, reliable automated tools for the unstructured discretization of human heads are also needed. Results presented in this article aim at filling the gap between human head MRI images and the accurate numerical modeling of wave propagation in biological tissues and its thermal effects.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://cermics.enpc.fr/~piper/perso/papers/2005-CRAS-HEADEXP.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal-enpc.archives-ouvertes.fr/hal-00607719}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Sermesant:TMI:06, AUTHOR = {Maxime Sermesant and Hervé Delingette and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {5}, PAGES = {612--625}, TITLE = {An Electromechanical Model of the Heart for Image Analysis and Simulation}, VOLUME = {25}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/TMI2006Sermesant.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00614991}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Sermesant:MEDIA:06, AUTHOR = {Maxime Sermesant and Philippe Moireau and Oscar Camara and Jacques Sainte-Marie and Rado Andriantsimiavona and Robert Cimrman and Derek L. Hill and Dominique Chapelle and Reza Razavi}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {4}, PAGES = {642--656}, TITLE = {Cardiac function estimation from MRI using a heart model and data assimilation: Advances and difficulties}, VOLUME = {10}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/MEDIA2006Sermesant.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00614997}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{simonetti:jnm:2006, AUTHOR = {Arjan W Simonetti and Vedat A Elezi and Regine Farion and Gregoire Malandain and Christoph Segebarth and Chantal Remy and Emmanuel L Barbier}, JOURNAL = {Journal of Neuroscience Methods}, MONTH = {December}, OPTNOTE = {}, NUMBER = {2}, PAGES = {242-50}, TITLE = {A low temperature embedding and section registration strategy for 3D image reconstruction of the rat brain from autoradiographic sections}, VOLUME = {158}, YEAR = {2006}, ABSTRACT = {In studies on animal models of human brain pathologies, three-dimensional reconstruction from histological sections is particularly useful when assessing the morphologic, functional and biochemical changes induced by pathology. It allows assessing lesion heterogeneity in planes different from the cutting plane and allows correlating the histology with images obtained in vivo, such as by means of magnetic resonance imaging. To create a 3D volume from autoradiographic sections with minimal distortion, both cryosectioning as well as section registration need to be optimal. This paper describes a strategy whereby four external fiducial markers are positioned outside the rat brain with the use of a low temperature brain embedding procedure. The fiducial markers proposed here can be rapidly added to any frozen tissue block with no impact on the subsequent histological operations. Since embedding is performed at a low temperature, no tissue degradation occurs due to sample heating. The markers enable robust and almost error free registration, even in the presence of missing sections and poor image quality. Furthermore, the markers may be used to partially correct for global distortions.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/simonetti-jnm-2006.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inserm-00388981/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Vercauteren:Media:06, AUTHOR = {Tom Vercauteren and Aymeric Perchant and Grégoire Malandain and Xavier Pennec and Nicholas Ayache}, JOURNAL = {Medical Image Analysis}, MONTH = {October}, NOTE = {Annual Medical Image Analysis (MedIA) Best Paper Award 2006. PMID: 16887375}, NUMBER = {5}, PAGES = {673--692}, TITLE = {Robust Mosaicing with Correction of Motion Distortions and Tissue Deformation for In Vivo Fibered Microscopy}, VOLUME = {10}, YEAR = {2006}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2006.06.006}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tom.Vercauteren/RobustMosaicingMotionDistoTissueDefInVivoFCM-MedIA06-Vercauteren.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00163961}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{arsigny:media:05, AUTHOR = {Vincent Arsigny and Xavier Pennec and Nicholas Ayache}, JOURNAL = {Medical Image Analysis}, MONTH = {December}, OPTNOTE = {}, NUMBER = {6}, PAGES = {507-523}, TITLE = {Polyrigid and Polyaffine Transformations: a Novel Geometrical Tool to Deal with Non-Rigid Deformations - Application to the registration of histological slices}, VOLUME = {9}, YEAR = {2005}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2005.04.001}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Non-rigid registration, Histological slices, Polyaffine transformations, Ordinary differential equations}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Arsigny_Media_ITK.pdf}, URL-PUBLISHER = {http://authors.elsevier.com/sd/article/S1361841505000289}, PMID = {15948656}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615665}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{boissonnat:media:2005, AUTHOR = {J.-D. Boissonnat and R. Chaine and P. Frey and G. Malandain and S. Salmon and E. Saltel and M. Thiriet}, JOURNAL = {Medical Image Analysis}, MONTH = {April}, OPTNOTE = {}, NUMBER = {2}, PAGES = {133-143}, TITLE = {From arteriographies to computational flow in saccular aneurisms: the INRIA experience}, VOLUME = {9}, YEAR = {2005}, ABSTRACT = {Saccular aneurisms illustrate usefulness and possible techniques of image-based modeling of flow in diseased vessels. Aneurism flow is investigated in order to estimate the rupture risk, assuming that the pressure is the major factor and that high-pressure zones are correlated to within-wall strong-stress concentrations. Computational flow is also aimed at providing additional arguments for the treatment strategy. Angiographies of aneurismal vessels of large and medium size are processed to provide three-dimensional reconstruction of the vessel region of interest. Different reconstruction techniques are used for a side and a terminal aneurisms. Reconstruction techniques may lead to different geometries especially with poor input data. The associated facetisation is improved to get a computation-adapted surface triangulation, after a treatment of vessel ends and mesh adaptation. Once the volumic mesh is obtained, the pulsatile flow of an incompressible Newtonian blood is computed using in vivo non-invasive flowmetry and the finite element method. High pressure zones are observed in the aneurism cavity. The pressure magnitude in the aneurism, the location and the size of high pressure zones depend mainly on the aneurism implantation on the vessel wall and its orientation with respect to the blood flux in the upstream vessel. The stronger the blood impacts on the aneurismal wall the higher the pressure. The state of the aneurism neck, where a high-pressure zone can occur, and the location of the aneurism, with an easy access or not, give arguments for the choice between coiling and surgical clipping. Mesh size and 3D reconstruction procedure affect the numerical results. Helpful qualitative data are provided rather than accurate quantitative results in the context of multimodeling.}, DOI = {10.1016/j.media.2004.11.004}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {3D reconstruction, Aneurism, Finite element method, Mesh adaptation, Pulsatile flow}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/boissonnat-media-2005.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/hal-00017614/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{bondiau:ijrobp:2005, AUTHOR = {Pierre-Yves Bondiau and Gregoire Malandain and Stephane Chanalet and Pierre-Yves Marcy and Jean-Louis Habrand and Francois Fauchon and Philippe Paquis and Adel Courdi and Olivier Commowick and Isabelle Rutten and Nicholas Ayache}, JOURNAL = {Int J Radiat Oncol Biol Phys}, MONTH = {January}, OPTNOTE = {}, NUMBER = {1}, PAGES = {289-98}, TITLE = {Atlas-based automatic segmentation of MR images: validation study on the brainstem in radiotherapy context}, VOLUME = {61}, YEAR = {2005}, ABSTRACT = {PURPOSE: Brain tumor radiotherapy requires the volume measurements and the localization of several individual brain structures. Any tool that can assist the physician to perform the delineation would then be of great help. Among segmentation methods, those that are atlas-based are appealing because they are able to segment several structures simultaneously, while preserving the anatomy topology. This study aims to evaluate such a method in a clinical context. METHODS AND MATERIALS: The brain atlas is made of two three-dimensional (3D) volumes: the first is an artificial 3D magnetic resonance imaging (MRI); the second consists of the segmented structures in this artificial MRI. The elastic registration of the artificial 3D MRI against a patient 3D MRI dataset yields an elastic transformation that can be applied to the labeled image. The elastic transformation is obtained by minimizing the sum of the square differences of the image intensities and derived from the optical flow principle. This automatic delineation (AD) enables the mapping of the segmented structures onto the patient MRI. Parameters of the AD have been optimized on a set of 20 patients. Results are obtained on a series of 6 patients' MRI. A comprehensive validation of the AD has been conducted on performance of atlas-based segmentation in a clinical context with volume, position, sensitivity, and specificity that are compared by a panel of seven experimented physicians for the brain tumor treatments. RESULTS: Expert interobserver volume variability ranged from 16.70 cm(3) to 41.26 cm(3). For patients, the ratio of minimal to maximal volume ranged from 48% to 70%. Median volume varied from 19.47 cm(3) to 27.66 cm(3) and volume of the brainstem calculated by AD varied from 17.75 cm(3) to 24.54 cm(3). Medians of experts ranged, respectively, for sensitivity and specificity, from 0.75 to 0.98 and from 0.85 to 0.99. Median of AD were, respectively, 0.77 and 0.97. Mean of experts ranged, respectively, from 0.78 to 0.97 and from 0.86 to 0.99. Mean of AD were, respectively, 0.76 and 0.97. CONCLUSIONS: Results demonstrate that the method is repeatable, provides a good trade-off between accuracy and robustness, and leads to reproducible segmentation and labeling. These results can be improved by enriching the atlas with the rough information of tumor or by using different laws of deformation for the different structures. Qualitative results also suggest that this method can be used for automatic segmentation of other organs such as neck, thorax, abdomen, pelvis, and limbs.}, DOI = {10.1016/j.ijrobp.2004.08.055}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Algorithms, Anatomical Atlas, methods, Brain Neoplasms, pathology, Brain Stem, anatomy & histology, Humans, Image Interpretation Computer-Assisted, methods, Magnetic Resonance Imaging, methods, Medical Illustration, Observer Variation, Reproducibility of Results, Sensitivity and Specificity}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/bondiau-ijrobp-2005.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615664}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{clatz_2:TMI:2005, AUTHOR = {Olivier Clatz and Hervé Delingette and Ion-Florin Talos and Alexandra J. Golby and Ron Kikinis and Ferenc Jolesz and Nicholas Ayache and Simon Warfield}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {Nov.}, OPTNOTE = {}, NUMBER = {11}, PAGES = {1417-1427}, TITLE = {Robust Non-Rigid Registration to Capture Brain Shift from Intra-Operative MRI}, VOLUME = {24}, YEAR = {2005}, ABSTRACT = {We present a new algorithm to register 3D pre-operative Magnetic Resonance (MR) images to intra-operative MR images of the brain which have undergone brain shift. This algorithm relies on a robust estimation of the deformation from a sparse noisy set of measured displacements. We propose a new framework to co mpute the displacement field in an iterative process, allowing the solution to gradually move from an approximation formulation (minimizing the sum of a re gularization term and a data error term) to an interpolation formulation (least square minimization of the data error term). An outlier rejection step is i ntroduced in this gradual registration process using a weighted least trimmed squares approach, aiming at improving the robustness of the algorithm. We use a patient-specific model discretized with the finite element method (FEM) in order to ensure a realistic mechanical behavior of the brain tissue. To meet the clinical time constraint, we parallelized the slowest step of the algorithm so that we can perform a full 3D image registration in 35 seconds ( including the image update time) on a heterogeneous cluster of 15 PCs. The algorithm has been tested on six cases of brain tumor resection, presenting a brain shift of up to 14 mm. The results show a good ability to recover la rge displacements, and a limited decrease of accuracy near the tumor resection cavity.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Non-rigid registration, intra-operative magnetic resonance imaging, finite element model, brain shift}, URL = {https://www-sop.inria.fr/asclepios/Publications/Clatz/TMI_intraoperative_clatz.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615661}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{clatz_1:TMI:2005, AUTHOR = {Olivier Clatz and Maxime Sermesant and Pierre-Yves Bondiau and Hervé Delingette and Simon K. Warfield and Grégoire Malandain and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {October}, OPTNOTE = {}, NUMBER = {10}, PAGES = {1334-1346}, TITLE = {Realistic Simulation of the 3D Growth of Brain Tumors in MR Images Coupling Diffusion with Mass Effect}, VOLUME = {24}, YEAR = {2005}, ABSTRACT = {We propose a new model to simulate the 3D growth of glioblastomas multiforma (GBMs), the most aggressive glial tumors. The GBM speed of growth depends on the invaded tissue: faster in white than in gray matter, it is stopped by the dura or the ventricles. These different structures are introduced into the model using an atlas matching technique. The atlas includes both the segmentations of anatomical structures and diffusion information in white matter fibers. We use the finite element method (FEM) to simulate the invasion of the GBM in the brain parenchyma and its mechanical interaction with the invaded structures (mass effect). Depending on the considered tissue, the former effect is modeled with a reaction-diffusion or a Gompertz equation, while the latter is based on a linear elastic brain constitutive equation. In addition, we propose a new coupling equation taking into account the mechanical influence of the tumor cells on the invaded tissues. The tumor growth simulation is assessed by comparing the \textit{in-silico} GBM growth with the real growth observed on two magnetic resonance images (MRIs) of a patient acquired with six months difference. Results show the feasibility of this new conceptual approach and justifies its further validation.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Tumor, brain, growth, model, simulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Clatz/TMI_GBM_clatz.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615662}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Delingette:cacm:2005, AUTHOR = {H. Delingette and N. Ayache}, JOURNAL = {Communications of the ACM}, MONTH = {February}, OPTNOTE = {}, NUMBER = {2}, PAGES = {31--36}, TITLE = {Hepatic Surgery Simulation}, VOLUME = {48}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/cacm-delingette-05.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615659}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Ducreux:Neuroradiology:05, AUTHOR = {D. Ducreux and I. Huynh and P. Fillard and J. Renoux and M.C. Petit-Lacour and K. Marsot-Dupuch and P. Lasjaunias}, JOURNAL = {Neuroradiology}, MONTH = {August}, OPTNOTE = {}, NUMBER = {8}, PAGES = {604-608}, TITLE = {Brain MR Diffusion Tensor Imaging and Fibre Tracking to Differentiate Between Two Diffuse Axonal Injuries}, VOLUME = {47}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00502656/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Facon:AJNR:05, AUTHOR = {D. Facon and A. Ozanne and P. Fillard and J.-F. Lepeintre and C. Tournoux-Facon and D. Ducreux}, JOURNAL = {AJNR. American journal of neuroradiology}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {1587-1594}, TITLE = {MR Diffusion Tensor Imaging and Fiber Tracking in Spinal Cord Compression}, VOLUME = {26}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00502651/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Forest:media:2005, AUTHOR = {C. Forest and H. Delingette and N. Ayache}, JOURNAL = {Medical Image Analysis}, MONTH = {April}, OPTNOTE = {}, NUMBER = {2}, PAGES = {113--122}, TITLE = {Removing Tetrahedra from manifold tetrahedralisation : application to real-time surgical simulation}, VOLUME = {9}, YEAR = {2005}, ABSTRACT = {This paper proposes an efficient method for removing tetrahedra from a tetrahedral mesh while keeping its manifold property. We first define precisely the notion of manifold tetrahedral mesh and stress its relevance in the context of real-time surgery simulation. We then provide a method for removing a tetrahedron that complies with the manifold definition. This removal may require in some cases the removal of neighboring tetrahedra. After providing an exhaustive description of the tetrahedron removal algorithm, its efficiency is evaluated for different mesh configurations. This algorithm is currently used in the context of real-time surgery simulation where the action of an ultrasonic lancet can be simulated by the removal of small set of tetrahedra from a tetrahedralisation.}, DOI = {10.1016/j.media.2004.11.003}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Surgical simulation, Topological modifications, Manifold meshes}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/Media-Forest-2005.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615666}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{fouard:ivc:2005, AUTHOR = {Céline Fouard and Grégoire Malandain}, JOURNAL = {Image and Vision Computing}, MONTH = {February}, OPTNOTE = {}, NUMBER = {2}, PAGES = {143--158}, TITLE = {3-D chamfer distances and norms in anisotropic grids}, VOLUME = {23}, YEAR = {2005}, ABSTRACT = {Chamfer distances are widely used in image analysis and many authors have investigated the computation of optimal chamfer mask coefficients. Unfortunately, these methods are not systematized: calculations have to be conducted manually for every mask size or image anisotropy. Since image acquisition (e.g. medical imaging) can lead to discrete anisotropic grids with unpredictable anisotropy value, automated calculation of chamfer mask coefficients becomes mandatory for e cient distance map computations. This article presents an automatic construction for chamfer masks of arbitrary sizes. This allows, first, to derive analytically the relative error with respect to the Euclidean distance, in any 3-D anisotropic lattice, and second, to compute optimal chamfer coefficients. In addition, the resulting chamfer map verifies discrete norm conditions.}, DOI = {10.1016/j.imavis.2004.06.009}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {chamfer distance, anisotropic lattice, Farey triangulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Fouard/Fouard_Malandain_IVC_2004.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/hal-00308886/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Germain:JCMC:2005, AUTHOR = {C. Germain and V. Breton and P. Clarysse and Y. Gaudeau and T. Glatard and E. Jeannot and Y. Legré and C. Loomis and I. Magnin and J. Montagnat and J.-M. Moureau and A. Osorio and X. Pennec and R. Texier}, JOURNAL = {Journal of Clinical Monitoring and Computing}, MONTH = {October}, OPTNOTE = {}, NUMBER = {4-5}, PAGES = {339--349}, PUBLISHER = {Springer}, TITLE = {Grid-Enabling Medical Image Analysis}, VOLUME = {19}, YEAR = {2005}, OPTABSTRACT = {}, DOI = {10.1007/s10877-005-0679-9}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.springerlink.com/openurl.asp?genre=article&issn=1387-1307&volume=19&issue=4&spage=339}, PMID = {16328948}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00288871/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{malandain:pls:05, AUTHOR = {Grégoire Malandain and Mauricio Reyes}, JOURNAL = {Pour la science}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {132--137}, TITLE = {La tomographie en mouvement}, VOLUME = {338}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.pourlascience.com/index.php?ids=WtziAfYhsmtvomeisOBp&Menu=Pls&Action=3&idn3=4915}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615669}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Montagnat:Media:04, AUTHOR = {J. Montagnat and H. Delingette}, JOURNAL = {Medical Image Analysis}, MONTH = {February}, OPTNOTE = {}, NUMBER = {1}, PAGES = {87--100}, TITLE = {4D Deformable Models with temporal constraints : application to 4D cardiac image segmentation}, VOLUME = {9}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/montagnat-Media04.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/hal-00443361/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Muthurangu:AJP:05, AUTHOR = {V Muthurangu and D Atkinson and M Sermesant and M E Miquel and S Hegde and R Johnson and R Andriantsimiavona and A M Taylor and E Baker and R Tulloh and D Hill and R S Razavi}, JOURNAL = {American journal of physiology. Heart and circulatory physiology}, MONTH = {September}, OPTNOTE = {}, NUMBER = {3}, PAGES = {1301-1306}, TITLE = {Measurement of total pulmonary arterial compliance using invasive pressure monitoring and MR flow quantification during MR-guided cardiac catheterization}, VOLUME = {289}, YEAR = {2005}, ABSTRACT = {Pulmonary hypertensive disease is assessed by quantification of pulmonary vascular resistance. Pulmonary total arterial compliance is also an indicator of pulmonary hypertensive disease. However, because of difficulties in measuring compliance, it is rarely used. We describe a method of measuring pulmonary arterial compliance utilizing magnetic resonance (MR) flow data and invasive pressure measurements. Seventeen patients with suspected pulmonary hypertension or congenital heart disease requiring preoperative assessment underwent MR-guided cardiac catheterization. Invasive manometry was used to measure pulmonary arterial pressure, and phase-contrast MR was used to measure flow at baseline and at 20 ppm nitric oxide (NO). Total arterial compliance was calculated using the pulse pressure method (parameter optimization of the 2-element windkessel model) and the ratio of stroke volume to pulse pressure. There was good agreement between the two estimates of compliance (r = 0.98, P 10% in response to 20 ppm NO. As a population, the increase did not reach statistical significance. There was an inverse relation between compliance and resistance (r = 0.89, P < 0.001) and between compliance and mean pulmonary arterial pressure (r = 0.72, P < 0.001). We have demonstrated the feasibility of quantifying total arterial compliance using an MR method.}, DOI = {10.1152/ajpheart.00957.2004}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.hubmed.org/display.cgi?uids=15879483}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615658}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Nicolau:CAVW:05, AUTHOR = {Stéphane Nicolau and Alain Garcia and Xavier Pennec and Luc Soler and Nicholas Ayache}, JOURNAL = {Computer Animation and Virtual World (previously the Journal of Visualization and Computer Animation)}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1}, PAGES = {1--10}, PUBLISHER = {Wiley}, TITLE = {An augmented reality system to guide radio-frequency tumor ablation}, VOLUME = {16}, YEAR = {2005}, OPTABSTRACT = {}, DOI = {10.1002/cav.52}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Nicolau.CAVW.pdf}, URL-PUBLISHER = {http://www3.interscience.wiley.com/cgi-bin/jtoc/106562739/}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615660}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Pennec:PLS:05, AUTHOR = {Xavier Pennec}, JOURNAL = {Pour la science}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {126--131}, TITLE = {Recaler pour mieux soigner}, VOLUME = {338}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/members/Xavier.Pennec/Pennec.PLS05.pdf}, URL-PUBLISHER = {http://www.pourlascience.com/index.php?ids=WtziAfYhsmtvomeisOBp&Menu=Pls&Action=3&idn3=4914}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615670}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Rhode:TMI:05, AUTHOR = {K. Rhode and M. Sermesant and D. Brogan and S. Hegde and J. Hipwell and P. Lambiase and E. Rosenthal and C. Bucknall and S. Qureshi and J. Gill and R. Razavi and D. Hill}, JOURNAL = {IEEE Transactions on Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {11}, PAGES = {1428-1440}, TITLE = {A system for real-time XMR guided cardiovascular intervention}, VOLUME = {24}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/TMI2005Rhode.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615663}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Sermesant:MEDIA:05, AUTHOR = {M. Sermesant and K. Rhode and G. Sanchez-Ortiz and O. Camara and R. Andriantsimiavona and S. Hegde and D. Rueckert and P. Lambiase and C. Bucknall and E. Rosenthal and H. Delingette and D. Hill and N. Ayache and R. Razavi}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {5}, PAGES = {467--480}, TITLE = {Simulation of Cardiac Pathologies using an Electromechanical Biventricular Model and XMR Interventional Imaging}, VOLUME = {9}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/SermesantMEDIA2005.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615667}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Stefanescu:MIM:05, AUTHOR = {Radu Stefanescu and Xavier Pennec and Nicholas Ayache}, JOURNAL = {Methods of Information in Medicine}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, OPTPAGES = {}, TITLE = {A Grid Service for the Interactive Use of a Parallel Non-Rigid Registration Algorithm of Medical Images}, VOLUME = {44}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {grid service, registration, non-rigid, parallel}, URL = {https://www-sop.inria.fr/asclepios/Publications/Stefanescu/MIM04.pdf}, URL-PUBLISHER = {http://www.methods-online.com/zs/methods/artikel.asp?path=/zs/methods/2005/2/&nummer=me05020239}, PMID = {15924183}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Pennec:Fusion:05, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Alexis Roche and Pascal Cathier and Nicholas Ayache}, BOOKTITLE = {Multi-Sensor Image Fusion and Its Applications}, CHAPTER = {4}, OPTEDITION = {}, EDITOR = {R.S. Blum and Zh. Liu}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {107--143}, PUBLISHER = {CRC Press - Taylor and Francis}, SERIES = {Signal Processing and Communications}, TITLE = {Non-Rigid MR/US Registration for Tracking Brain Deformations}, OPTTYPE = {}, VOLUME = {26}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, ultrasound, motion tracking, deformations, magnetic resonance, correlation ratio, robust estimation, multimodal}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.MRUS_Fusion.pdf}, URL-PUBLISHER = {http://www.crcpress.com/shopping_cart/products/product_detail.asp?sku=DK493X}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615672}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{pitiot:SegmentationReview:2005, OPTADDRESS = {}, AUTHOR = {A. Pitiot and H. Delingette and P.M. Thompson}, BOOKTITLE = {Medical Imaging Systems Technology}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Cornelius T. Leondes}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {World Scientific}, OPTSERIES = {}, TITLE = {Automated Image Segmentation: Issues and Applications}, OPTTYPE = {}, VOLUME = {3}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/leondes-segmentation-2004Aug09.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615671}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{pitiot:neuroimage:04, AUTHOR = {J. Annese and A. Pitiot and I.D. Dinov and A.W. Toga}, JOURNAL = {NeuroImage}, MONTH = {January}, OPTNOTE = {}, NUMBER = {1}, PAGES = {15-26}, TITLE = {A myelo-architectonic method for the structural classification of cortical areas}, VOLUME = {21}, YEAR = {2004}, ABSTRACT = {We describe an automatic and reproducible method to analyze the histological design of the cerebral cortex as applied to brain sections stained to reveal myelinated fibers. The technique provides an evaluation of the distribution of myelination across the width of the cortical mantle in accordance with a model of its curvature and its intrinsic geometry. The profile lines along which the density of staining is measured are generated from the solution of a partial differential equation (PDE) that models the intermediate layers of the cortex. Cortical profiles are classified according to significant components that emerge from wavelet analysis. Intensity profiles belonging to each distinct class are normalized and averaged to produce area-specific templates of cortical myelo-architecture.}, DOI = {10.1016/j.neuroimage.2003.08.024}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Myelo-architecture, Cerebral cortex, Cortical areas}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{blondel:pmb:2004, AUTHOR = {Christophe Blondel and Régis Vaillant and Grégoire Malandain and Nicholas Ayache}, JOURNAL = {Physics in Medicine and Biology}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {11}, PAGES = {2197--2208}, TITLE = {3-D tomographic reconstruction of coronary arteries using a precomputed 4-D motion field}, VOLUME = {49}, YEAR = {2004}, OPTABSTRACT = {}, DOI = {10.1088/0031-9155/49/11/006}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/blondel-pmb-2004.pdf}, URL-PUBLISHER = {http://stacks.iop.org/0031-9155/49/2197}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{bondiau:ct:2004, AUTHOR = {P.Y. Bondiau and G. Malandain and S. Chanalet and P.Y. Marcy and C. Foa and N. Ayache}, JOURNAL = {Cancer radiothérapie}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, PAGES = {120--129}, TITLE = {Traitement des images et radiothérapie}, VOLUME = {8}, YEAR = {2004}, ABSTRACT = {La radioth{\'e}rapie est un domaine privil{\'e}gi{\'e} d'application des techniques de traitement des images de par l'utilisation importante de donn{\'e}es issues de l'imagerie. Celles-ci sont de plus en pleine expansion du fait de la progression des performances informatiques. Actuellement, les d{\'e}veloppements r{\'e}cents de la radioth{\'e}rapie (radioth{\'e}rapie de conformation, radioth{\'e}rapie conformationnelle avec modulation d'intensit{\'e}) procurent une place majeure {\`a} ces techniques. En effet, elles contribuent {\`a} r{\'e}pondre aux conditions de pr{\'e}cision exig{\'e}es par la radioth{\'e}rapie moderne et permettent d'envisager d'am{\'e}liorer les traitements. L'objectif de cet article est de pr{\'e}senter les diff{\'e}rentes techniques du traitement d'image utilis{\'e}es aujourd'hui en radioth{\'e}rapie (segmentation et recalage en particulier) au travers de la litt{\'e}rature.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/bondiau-cancer-2004.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Cachier-JMIV-2004, AUTHOR = {P. Cachier and N. Ayache}, JOURNAL = {Journal of Mathematical Imaging and Vision}, MONTH = {May}, OPTNOTE = {}, NUMBER = {3}, PAGES = {251--265}, TITLE = {Isotropic energies, filters and splines for vectorial regularization}, VOLUME = {20}, YEAR = {2004}, OPTABSTRACT = {}, DOI = {10.1023/B:JMIV.0000024042.88755.4f}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {vector field regularization, non-rigid registration, convolution filter, spline}, URL = {https://www-sop.inria.fr/asclepios/Publications/Cachier/JMIV.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Delingette:Centraliens:04, AUTHOR = {H. Delingette}, JOURNAL = {Centraliens}, MONTH = {February}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {17--18}, TITLE = {Réalité Virtuelle et Médecine}, VOLUME = {552}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Gonzalez:MedIA:04, AUTHOR = {González Ballester, Miguel Angel and Xavier Pennec and Marius George Linguraru and Nicholas Ayache}, JOURNAL = {Medical Image Analysis}, MONTH = {September}, OPTNOTE = {}, NUMBER = {3}, PAGES = {361--369}, PUBLISHER = {Elsevier}, TITLE = {Generalized Image Models and Their Application as Statistical Models of Images}, VOLUME = {8}, YEAR = {2004}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2004.06.012}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gonzalez/Gonzalez_MedIA_2004.pdf}, OPTURL-PUBLISHER = {}, PMID = {15450229}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{klein:cbr:04, AUTHOR = {Isabelle Klein and Jessica Dubois and Jean-François Mangin and Ferath Kherif and Guillaume Flandin and Jean-Baptiste Poline and Michel Denis and Stephen M. Kosslyn and Denis LeBihan}, JOURNAL = {Cognitive Brain Research}, MONTH = {December}, OPTNOTE = {}, NUMBER = {1}, PAGES = {26--31}, TITLE = {Retinotopic organization of visual mental images as revealed by functional magnetic resonance imaging}, VOLUME = {22}, YEAR = {2004}, ABSTRACT = {In this study, we used event-related functional magnetic resonance imaging to investigate whether visual mental images retinotopically activate early visual cortex. Six participants were instructed to visualize or view horizontally or vertically oriented flashing bow-tie shaped stimuli. When compared to baseline, imagery globally activated Area V1. When the activation evoked by the stimuli at the different orientations was directly compared, distinct spatial activation patterns were obtained for each orientation in most participants. Not only was the topography of the activation patterns from imagery similar to the topography obtained with a corresponding visual perception task, but it closely matched the individual cortical representation of either the horizontal or the vertical visual field meridians. These findings strongly support that visual imagery and perception share low-level anatomical substrate and functional processes. Binding of spatial features is suggested as one possible mechanism.}, DOI = {10.1016/j.cogbrainres.2004.07.006}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/hal-00349680/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{lebrun:rn:2004, AUTHOR = {C Lebrun and D Rey and S Chanalet and V Bourg and C Bensa and M Chatel and N Ayache and G Malandain}, JOURNAL = {Revue Neurologique}, MONTH = {September}, NOTE = {in French}, NUMBER = {8-9}, PAGES = {805-10}, TITLE = {The contribution of automatic anatomical matching of sequential brain MRI scans in the monitoring of multiple sclerosis lesions}, VOLUME = {160}, YEAR = {2004}, ABSTRACT = {INTRODUCTION: Magnetic resonance imaging (MRI) has transformed management of patients with multiple sclerosis. The exact contribution of brain MRI remains a subject of debate, but it is generally considered to provide a more specific and more sensitive outcome measure for monitoring purposes and for testing new therapies. The choice of MRI techniques, and measurement reproducibility for multiple sclerosis brain lesions are not defined with precision for routine practice. There are many sources of error when comparing successive images which can be overcome to some extent with repositioning and image processing techniques. METHODS: We evaluated the impact of image repositioning on treatment decision-making for twelve relapsing remitting patients. Brain MRIs were performed every three months for a one-year period. Two neurologists interpreted the non-repositioned and repositioned images giving their analysis of changes in the lesions visualized on the T2 sequences and their therapeutic decisions. RESULTS: For the first neurologist, analysis of the non-repositioned images yielded six patients whose lesions had worsened while for the repositioned images there were only three. For the second neurologist, four patients had more lesions with the non-repositioned images and only three with repositioning. The subjective interpretations were the same for the two neurologists when they used repositioned images. CONCLUSIONS: Comparison by two neurologists of non-repositioned and repositioned MRI, with no other image processing, affected the analysis and in certain cases propositions for treatment.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/lebrun-rn-2004.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{pitiot:joa:2004, AUTHOR = {A. MacKenzie-Graham and E.F. Lee and I.D. Dinov and M. Bota and D.W. Shattuck and S. Ruffins and H. Yuan and F. Konstantinidis and A. Pitiot and Y. Ding and G. Hu and R.E. Jacobs and A.W. Toga}, JOURNAL = {Journal of Anatomy}, MONTH = {February}, OPTNOTE = {}, NUMBER = {2}, PAGES = {93--102}, TITLE = {A multimodal, multidimensional atlas of the C57BL/6J mouse brain}, VOLUME = {204}, YEAR = {2004}, ABSTRACT = {Strains of mice, through breeding or the disruption of normal genetic pathways, are widely used to model human diseases. Atlases are an invaluable aid in understanding the impact of such manipulations by providing a standard for comparison. We have developed a digital atlas of the adult C57BL/6J mouse brain as a comprehensive framework for storing and accessing the myriad types of information about the mouse brain. Our implementation was constructed using several different imaging techniques: magnetic resonance microscopy, blockface imaging, classical histology and immunohistochemistry. Along with raw and annotated images, it contains database management systems and a set of tools for comparing information from different techniques. The framework allows facile correlation of results from different animals, investigators or laboratories by establishing a canonical representation of the mouse brain and providing the tools for the insertion of independent data into the same space as the atlas. This tool will aid in managing the increasingly complex and voluminous amounts of information about the mammalian brain. It provides a framework that encompasses genetic information in the context of anatomical imaging and holds tremendous promise for producing new insights into the relationship between genotype and phenotype. We describe a suite of tools that enables the independent entry of other types of data, facile retrieval of information and straightforward display of images. Thus, the atlas becomes a framework for managing complex genetic and epigenetic information about the mouse brain. The atlas and associated tools may be accessed at http://www.loni.ucla.edu/MAP.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/mackenzie-ja-2004.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{malandain:ni:2004, AUTHOR = {Grégoire Malandain and Éric Bardinet and Koen Nelissen and Wim Vanduffel}, JOURNAL = {NeuroImage}, MONTH = {September}, OPTNOTE = {}, NUMBER = {1}, PAGES = {111--127}, TITLE = {Fusion of autoradiographs with an MR volume using 2-D and 3-D linear transformations}, VOLUME = {23}, YEAR = {2004}, ABSTRACT = {In the past years, the development of 3-D medical imaging has enabled the 3-D imaging of in vivo tissues, from an anatomical (MR, CT) or even functional (fMRI, PET, SPECT) point of view. However, despite immense technological progress, the resolution of these images is still short of the level of anatomical or functional details that in vitro imaging (e.g. histology, autoradiography) permits. The motivation of this work is to compare fMRI activations to activations observed in autoradiographic images from the same animals. We aim to fuse post-mortem autoradiographic data with a pre-mortem anatomical MR image. We first reconstruct a 3-D volume from the 2-D autoradiographic sections, coherent both in geometry and intensity. Then, this volume is fused with the MR image. This way, we ensure that the reconstructed 3-D volume can be superimposed onto the MR image that represents the reference anatomy. We demonstrate that this fusion can be achieved by using only simple global transformations (rigid and/or affine, 2-D and 3-D), while yielding very satisfactory results.}, DOI = {10.1016/j.neuroimage.2004.04.038}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/malandain-neuroimage-2004.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{peeters-kornprobst:ijist:2004, AUTHOR = {R.R. Peeters and P. Kornprobst and M. Nikolova and S. Sunaert and T. Vieville and G. Malandain and R. Deriche and O. Faugeras and M. Ng and Van Hecke, P.}, JOURNAL = {International Journal of Imaging Systems and Technology}, OPTMONTH = {}, NOTE = {Special issue on High Resolution Image Reconstruction}, NUMBER = {3}, PAGES = {131--138}, TITLE = {The use of superresolution techniques to reduce slice thickness in functional MRI}, VOLUME = {14}, YEAR = {2004}, ABSTRACT = {The problem of increasing the slice resolution of functional MRI (fMRI) images without a loss in signal-to-noise ratio is considered. In standard fMRI experiments, increasing the slice resolution by a certain factor decreases the signal-to-noise ratio of the images with the same factor. For this purpose an adapted EPI MRI acquisition protocol is proposed, allowing one to acquire slice-shifted images from which one can generate interpolated super-resolution images, with an increased resolution in the slice direction. To solve the problem of correctness and robustness of the created super-resolution images from these slice-shifted datasets, the use of discontinuity preserving regularization methods is proposed. Tests on real morphological, synthetic functional, and real functional MR datasets have been performed, by comparing the obtained super-resolution datasets with high-resolution reference datasets. In the morphological experiments the image spatial resolution of the different types of images are compared. In the synthetic and real fMRI experiments, on the other hand, the quality of the different datasets is studied as function of their resulting activation maps. From the results obtained in this study, we conclude that the proposed super-resolution techniques can both improve the signal-to-noise ratio and augment the detectability of small activated areas in fMRI image sets acquired with thicker slices.}, DOI = {10.1002/ima.20016}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {fMRI, Super-Resolution algorithm, SNR}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Pitiot:Neuroimage:2004, AUTHOR = {A. Pitiot and H. Delingette and P. M. Thompson and N. Ayache}, JOURNAL = {NeuroImage}, OPTMONTH = {}, NOTE = {Special Issue: Mathematics in Brain Imaging}, NUMBER = {supplement 1}, PAGES = {S85--S96}, TITLE = {Expert Knowledge Guided Segmentation System for Brain MRI}, VOLUME = {23}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Pitiot/pitiot-neuroimage2004.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Sermesant:JCMR:04, AUTHOR = {M. Sermesant and K. Rhode and S. Hegde and G. Sanchez-Ortiz and D. Rueckert and P. Lambiase and C. Bucknall and D. Hill and R. Razavi}, JOURNAL = {Journal of Cardiovascular Magnetic Resonance}, OPTMONTH = {}, NOTE = {abstract}, NUMBER = {1}, PAGES = {123--125}, TITLE = {Electromechanical Modelling of the Myocardium using XMR Interventional Imaging}, VOLUME = {6}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{simon:neuroimage:04, AUTHOR = {Olivier Simon and Ferath Kherif and Guillaume Flandin and Jean-Baptiste Poline and Denis Rivière and Jean-François Mangin and Denis LeBihan and Stanislas Dehaene}, JOURNAL = {NeuroImage}, MONTH = {November}, OPTNOTE = {}, NUMBER = {3}, PAGES = {1192--1202}, TITLE = {Automatized clustering and functional geometry of human parietofrontal networks for language, space, and number}, VOLUME = {23}, YEAR = {2004}, ABSTRACT = {Human functional MRI studies frequently reveal the joint activation of parietal and of lateral and mesial frontal areas during various cognitive tasks. To analyze the geometrical organization of those networks, we used an automatized clustering algorithm that g parcels out sets of areas based on their similar profile of task-related activations or deactivations. This algorithm allowed us to reanalyze published fMRI data (Simon, O., Mangin, J.F., Cohen, L., Le Bihan, D., Dehaene, S., 2002. Topographical layout of hand, eye, calculation, and language-related areas in the human parietal lobe. Neuron 33, 475-487) and to reproduce the previously observed geometrical organization of activations for saccades, attention, grasping, pointing, calculation, and language processing in the parietal lobe. Further, we show that this organization extends to lateral and mesial prefrontal regions. Relative to the parietal lobe, the prefrontal functional geometry is characterized by a partially symmetrical anteroposterior ordering of activations, a decreased representation of effector-specific tasks, and a greater emphasis on higher cognitive functions of attention, higher-order spatial representation, calculation, and language. Anatomically, our results in humans are closely homologous to the known connectivity of parietal and frontal regions in the macaque monkey.}, DOI = {10.1016/j.neuroimage.2004.09.023}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/hal-00349681/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Soler:Electricien:2004, AUTHOR = {Luc Soler and Nicholas Ayache and Stéphane Nicolau and Xavier Pennec and Clément Forest and Hervé Delingette and Jacques Marescaux}, JOURNAL = {La Revue de l'Electricité et de l'Electronique}, MONTH = {janvier}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {64--71}, TITLE = {Traitement d'images médicales pour la planification, la simulation et l'aide intra-opératoire des actes chirurgicaux}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Soler/Soler_Electrique_204.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Stefanescu:MEDIA:04, AUTHOR = {Radu Stefanescu and Xavier Pennec and Nicholas Ayache}, JOURNAL = {Medical Image Analysis}, MONTH = {September}, OPTNOTE = {}, NUMBER = {3}, PAGES = {325--342}, TITLE = {Grid Powered Nonlinear Image Registration with Locally Adaptive Regularization}, VOLUME = {8}, YEAR = {2004}, OPTABSTRACT = {}, DOI = {10.1016/j.media.2004.06.010}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {non-rigid registration, adaptive regularization, grid, parallel}, URL = {https://www-sop.inria.fr/asclepios/Publications/Stefanescu/media04.pdf}, OPTURL-PUBLISHER = {}, PMID = {15450226}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Stefanescu:PPL:04, AUTHOR = {Radu Stefanescu and Xavier Pennec and Nicholas Ayache}, JOURNAL = {Parallel Processing Letters}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, PAGES = {197--216}, TITLE = {Grid-Enabled Non-Rigid Registration of Medical Images}, VOLUME = {14}, YEAR = {2004}, OPTABSTRACT = {}, DOI = {10.1142/S0129626404001830}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {grid, non-rigid registration, parallel, cluster}, URL = {https://www-sop.inria.fr/asclepios/Publications/Stefanescu/ParallelDemons.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Delingette:HNA:04, OPTADDRESS = {}, AUTHOR = {H. Delingette and N. Ayache}, BOOKTITLE = {Computational Models for the Human Body}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {N. Ayache}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {453--550}, PUBLISHER = {Elsevier}, SERIES = {Handbook of Numerical Analysis (Ed : Ph. Ciarlet)}, TITLE = {Soft Tissue Modeling for Surgery Simulation}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/hna-delingette.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Soler:ImageriePhotonique:2004, OPTADDRESS = {}, AUTHOR = {Luc Soler and Nicholas Ayache and Stéphane Nicolau and Xavier Pennec and Clément Forest and Hervé Delingette and Didier Mutter and Jacques Marescaux}, BOOKTITLE = {Imagerie et Photonique pour les sciences du vivant et la médecine}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {M. Faupel and P. Smigielski and R. Grzymala}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {19-31}, PUBLISHER = {Edition Fontis Media}, OPTSERIES = {}, TITLE = {Traitements d'images médicales pour la planification, la simulation et l'aide intra-opératoire des actes chirurgicaux}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, ISBN = {2-88476-005-9}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Ayache-edito-TMI03, AUTHOR = {N. Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {October}, OPTNOTE = {}, NUMBER = {10}, PAGES = {1185--1201}, TITLE = {Epidaure: a Research Project in Medical Image Analysis, Simulation and Robotics at INRIA}, VOLUME = {22}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Ayache/Ayache-editorial-ieee-tmi.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Ayache/Ayache-editorial-ieee-tmi.ps.gz}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{bondiau-malandain-al:mp:2003, AUTHOR = {Pierre-Yves Bondiau and Grégoire Malandain and Pierre Chauvel and Frédérique Peyrade and Adel Courdi and Nicole Iborra and Jean-Pierre Caujolle and Pierre Gastaud}, JOURNAL = {Medical Physics}, MONTH = {June}, OPTNOTE = {}, NUMBER = {6}, PAGES = {1013-1020}, TITLE = {Automatic three-dimensional model for protontherapy of the eye: Preliminary results}, VOLUME = {30}, YEAR = {2003}, ABSTRACT = {Recently, radiotherapy possibilities have been dramatically increased by software and hardware developments. Improvements in medical imaging devices have increased the importance of three-dimensional (3D) images as the complete examination of these data by a physician is not possible. Computer techniques are needed to present only the pertinent information for clinical applications. We describe a technique for an automatic 3D reconstruction of the eye and CT scan merging with fundus photographs (retinography). The final result is a "virtual eye" to guide ocular tumor protontherapy. First, we make specific software to automatically detect the position of the eyeball, the optical nerve, and the lens in the CT scan. We obtain a 3D eye reconstruction using this automatic method. Second, we describe the retinography and demonstrate the projection of this modality. Then we combine retinography with a reconstructed eye, using a CT scan to get a virtual eye. The result is a computer 3D scene rendering a virtual eye into a skull reconstruction. The virtual eye can be useful for the simulation, the planning, and the control of ocular tumor protontherapy. It can be adapted to treatment planning to automatically detect eye and organs at risk position. It should be highlighted that all the image processing is fully automatic to allow the reproduction of results, this is a useful property to conduct a consistent clinical validation. The automatic localization of the organ at risk in a CT scan or an MRI by automatic software could be of great interest for radiotherapy in the future for comparison of one patient at different times, the comparison of different treatments centers, the possibility of pooling results of different treatments centers, the automatic generation of doses-volumes histograms, the comparison between different treatment planning for the same patient and the comparison between different patients at the same time. It will also be less time consuming.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Cachier:CVIU:03, AUTHOR = {Pascal Cachier and Eric Bardinet and Didier Dormont and Xavier Pennec and Nicholas Ayache}, JOURNAL = {Computer Vision and Image Understanding}, MONTH = {Feb.-march}, NOTE = {Special Issue on Nonrigid Registration}, NUMBER = {2-3}, PAGES = {272--298}, TITLE = {Iconic Feature Based Nonrigid Registration: The PASHA Algorithm}, VOLUME = {89}, YEAR = {2003}, OPTABSTRACT = {}, DOI = {10.1016/S1077-3142(03)00002-X}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, similarity measures, deformations}, URL = {https://www-sop.inria.fr/asclepios/Publications/Cachier/Cachier_CVIU_2003.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Clatz:Mec_et_ind:03, AUTHOR = {Olivier Clatz and Hervé Delingette and Eric Bardinet and Didier Dormont and Nicholas Ayache}, JOURNAL = {Mécanique et Industrie}, OPTMONTH = {}, NOTE = {Numéro spécial CFM 2003}, NUMBER = {4}, PAGES = {429--433}, PUBLISHER = {Elsevier}, TITLE = {Création d'un Modèle Biomécanique Spécifique du Cerveau par l'Analyse d'Images et son Application à la Neurochirurgie Stéréotaxique}, VOLUME = {4}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/TI-CFM03-clatz.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{hellier:tmi:2003, AUTHOR = {P Hellier and C Barillot and I Corouge and B Gibaud and Le Goualher, G and D L Collins and A Evans and G Malandain and N Ayache and G E Christensen and H J Johnson}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {September}, OPTNOTE = {}, NUMBER = {9}, PAGES = {1120-30}, TITLE = {Retrospective evaluation of intersubject brain registration}, VOLUME = {22}, YEAR = {2003}, ABSTRACT = {Although numerous methods to register brains of different individuals have been proposed, no work has been done, as far as we know, to evaluate and objectively compare the performances of different nonrigid (or elastic) registration methods on the same database of subjects. In this paper, we propose an evaluation framework, based on global and local measures of the relevance of the registration. We have chosen to focus more particularly on the matching of cortical areas, since intersubject registration methods are dedicated to anatomical and functional normalization, and also because other groups have shown the relevance of such registration methods for deep brain structures. Experiments were conducted using 6 methods on a database of 18 subjects. The global measures used show that the quality of the registration is directly related to the transformation's degrees of freedom. More surprisingly, local measures based on the matching of cortical sulci did not show significant differences between rigid and non rigid methods.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/hellier-tmi-2003.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00536383/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Kherif:NeuroImage:03, AUTHOR = {Ferath Kherif and Jean-Baptiste Poline and Sébastien Meriaux and Habib Benali and Guillaume Flandin and Matthew Brett}, JOURNAL = {NeuroImage}, MONTH = {December}, OPTNOTE = {}, NUMBER = {4}, PAGES = {2197--2208}, TITLE = {Group analysis in functional neuroimaging: selecting subjects using similarity measures}, VOLUME = {20}, YEAR = {2003}, ABSTRACT = {Standard group analyses of fMRI data rely on spatial and temporal averaging of individuals. This averaging operation is only sensible when the mean is a good representation of the group. This is not the case if subjects are not homogeneous, and it is therefore a major concern in fMRI studies to assess this group homogeneity. We present a method that provides relevant distances or similarity measures between temporal series of brain functional images belonging to different subjects. The method allows a multivariate comparison between data sets of several subjects in the time or in the space domain. These analyses assess the global intersubject variability before averaging subjects and drawing conclusions across subjects, at the population level. We adapt the RV coefficient to measure meaningful spatial or temporal similarities and use multidimensional scaling to give a visual representation of each subject's position with respect to other subjects in the group. We also provide a measure for detecting subjects that may be outliers. Results show that the method is a powerful tool to detect subjects with specific temporal or spatial patterns, and that, despite the apparent loss of information, restricting the analysis to a homogeneous subgroup of subjects does not reduce the statistical sensitivity of standard group fMRI analyses.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {fMRI, Group analysis, Multivariate analysis, Statistical analysis}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/cea-00371054/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Lahaye:NeuroImage:03, AUTHOR = {Pierre-Jean Lahaye and Jean-Baptiste Poline and Guillaume Flandin and Silke Dodel and Line Garnero}, JOURNAL = {NeuroImage}, MONTH = {October}, OPTNOTE = {}, NUMBER = {2}, PAGES = {962--974}, TITLE = {Functional connectivity: studying nonlinear, delayed interactions between BOLD signals}, VOLUME = {20}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {fMRI}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Montagnat:PattRecLetters:03, AUTHOR = {J. Montagnat and M. Sermesant and H. Delingette and G. Malandain and N. Ayache}, JOURNAL = {Pattern Recognition Letters}, MONTH = {February}, NOTE = {Special Issue on Ultrasonic Image Processing and Analysis}, NUMBER = {4-5}, PAGES = {815--828}, TITLE = {Anisotropic filtering for model-based segmentation of 4D cylindrical echocardiographic images}, VOLUME = {24}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {anisotropic diffusion, 4D, Heart, segmentation, ultrasound, medical images, motion tracking}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/PRL2003Sermesant.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/PRL2003Sermesant.ps.gz}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Pennec:Cachier:PattRecLetters:03, AUTHOR = {Xavier Pennec and Pascal Cachier and Nicholas Ayache}, JOURNAL = {Pattern Recognition Letters}, MONTH = {February}, NOTE = {Special Issue on Ultrasonic Image Processing and Analysis}, NUMBER = {4-5}, PAGES = {801--813}, TITLE = {Tracking Brain Deformations in Time-Sequences of 3D US Images}, VOLUME = {24}, YEAR = {2003}, OPTABSTRACT = {}, DOI = {10.1016/S0167-8655(02)00183-6}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, ultrasound, motion tracking, deformations}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.Cachier.Ayache.PattRecLetters02.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Picinbono:GraphMod:03, AUTHOR = {G. Picinbono and H. Delingette and N. Ayache}, JOURNAL = {Graphical Models}, MONTH = {September}, OPTNOTE = {}, NUMBER = {5}, PAGES = {305--321}, TITLE = {Non-Linear Anisotropic Elasticity for Real-Time Surgery Simulation}, VOLUME = {65}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {journal, simulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/Picinbono-GM03.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Sermesant:Media:03, AUTHOR = {Maxime Sermesant and Clément Forest and Xavier Pennec and Hervé Delingette and Nicholas Ayache}, JOURNAL = {Medical Image Analysis}, MONTH = {December}, OPTNOTE = {}, NUMBER = {4}, PAGES = {475--488}, TITLE = {Deformable biomechanical models: Application to 4D cardiac image analysis}, VOLUME = {7}, YEAR = {2003}, OPTABSTRACT = {}, DOI = {10.1016/S1361-8415(03)00068-9}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/Sermesant-Media03.pdf}, URL-PUBLISHER = {http://authors.elsevier.com/sd/article/S1361841503000689}, PMID = {14561552}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Yelnik:JNeuroSurg:03, AUTHOR = {J. Yelnik and P. Damier and S. Demeret and D. Gervais and E. Bardinet and B.P. Bejjani and C. Francois and J.L. Houeto and I. Arnule and D. Dormont and D. Galanaud and B. Pidoux and P. Cornu and Y. Agid}, JOURNAL = {Journal of Neurosurgery}, MONTH = {July}, OPTNOTE = {}, NUMBER = {1}, PAGES = {89--99}, TITLE = {Localization of stimulating electrodes in patients with Parkinson disease by using a three-dimensional atlas-magnetic resonance imaging coregistration method}, VOLUME = {99}, YEAR = {2003}, ABSTRACT = {OBJECT: The aim of this study was to correlate the clinical improvement in patients with Parkinson disease (PD) treated using deep brain stimulation (DBS) of the subthalamic nucleus (STN) with the precise anatomical localization of stimulating electrodes. METHODS: Localization was determined by superimposing figures from an anatomical atlas with postoperative magnetic resonance (MR) images obtained in each patient. This approach was validated by an analysis of experimental and clinical MR images of the electrode, and the development of a three-dimensional (3D) atlas-MR imaging coregistration method. The PD motor score was assessed through two contacts for each of two electrodes implanted in 10 patients: the "therapeutic contact" and the "distant contact" (that is, the next but one to the therapeutic contact). Seventeen therapeutic contacts were located within or on the border of the STN, most of which were associated with significant improvement of the four PD symptoms tested. Therapeutic contacts located in other structures (zona incerta, lenticular fasciculus, or midbrain reticular formation) were also linked to a significant positive effect. Stimulation applied through distant contacts located in the STN improved symptoms of PD, whereas that delivered through distant contacts in the remaining structures had variable effects ranging from worsening of symptoms to their improvement. CONCLUSIONS: The authors have demonstrated that 3D atlas-MR imaging coregistration is a reliable method for the precise localization of DBS electrodes on postoperative MR images. In addition, they have confirmed that although the STN is the main target during DBS treatment for PD, stimulation of surrounding regions, particularly the zona incerta or the lenticular fasciculus, can also improve symptoms of PD.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Gonzalez:Media:02, AUTHOR = {González Ballester, M. A. and A. Zisserman and M. Brady}, JOURNAL = {Medical Image Analysis}, MONTH = {December}, OPTNOTE = {}, NUMBER = {4}, PAGES = {389--405}, PUBLISHER = {Elsevier}, TITLE = {Estimation of the Partial Volume Effect in MRI}, VOLUME = {6}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gonzalez/Gonzalez_MedIA_2002.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Jannin-edito-TMI02, AUTHOR = {P. Jannin and J.M. Fitzpatrick and D.J. Hawkes and X. Pennec and R. Shahidi and M.W. Vannier}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {December}, OPTNOTE = {}, NUMBER = {12}, PAGES = {1445--1449}, TITLE = {Validation of Medical Image Processing in Image-guided Therapy}, VOLUME = {21}, YEAR = {2002}, OPTABSTRACT = {}, DOI = {10.1109/TMI.2002.806568}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://ieeexplore.ieee.org/xpl/tocresult.jsp?isYear=2002&isnumber=26419}, PMID = {12588028}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inserm-00331766/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Bardinet:CompNeurol:2002, AUTHOR = {Carine Karachi and Chantal François and Karine Parain and Eric Bardinet and Dominique Tandé and Etienne Hirsch and Jérôme Yelnik}, JOURNAL = {Journal of Comparative Neurology}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {122--134}, TITLE = {Three-dimensional cartography of functional territories in the human striatopallidal complex by using calbindin immunoreactivity}, VOLUME = {450(2)}, YEAR = {2002}, ABSTRACT = {This anatomic study presents an analysis of the distribution of calbindin immunohistochemistry in the human striatopallidal complex. Entire brains were sectioned perpendicularly to the mid-commissural line into 70-microm-thick sections. Every tenth section was immunostained for calbindin. Calbindin labeling exhibited a gradient on the basis of which three different regions were defined: poorly labeled, strongly labeled, and intermediate. Corresponding contours were traced in individual sections and reformatted as three-dimensional structures. The poorly labeled region corresponded to the dorsal part of the striatum and to the central part of the pallidum. The strongly labeled region included the ventral part of the striatum, the subcommissural part of the external pallidum but also the adjacent portion of its suscommissural part, and the anterior pole of the internal pallidum. The intermediate region was located between the poorly and strongly labeled regions. As axonal tracing and immunohistochemical studies in monkeys show a similar pattern, poorly, intermediate, and strongly labeled regions were considered as the sensorimotor, associative, and limbic territories of the human striatopallidal complex, respectively. However, the boundaries between these territories were not sharp but formed gradients of labeling, which suggests overlapping between adjacent territories. Similarly, the ventral boundary of the striatopallidal complex was blurred, suggesting a structural intermingling with the substantia innominata. This three-dimensional partitioning of the human striatopallidal complex could help to define functional targets for high-frequency stimulation with greater accuracy and help to identify new stimulation sites.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Kherif:NeuroImage:02, AUTHOR = {Ferath Kherif and Jean-Baptiste Poline and Guillaume Flandin and Habib Benali and Olivier Simon and Stanislas Dehaene and Keith J. Worsley}, JOURNAL = {NeuroImage}, MONTH = {August}, OPTNOTE = {}, NUMBER = {4}, PAGES = {1068--1083}, TITLE = {Multivariate Model Specification for fMRI Data}, VOLUME = {16}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {fMRI, model selection, multivariate analysis}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{malandain-boissonnat:ijcga:2002, AUTHOR = {Grégoire Malandain and Jean-Daniel Boissonnat}, JOURNAL = {International Journal of Computational Geometry & Applications}, MONTH = {December}, OPTNOTE = {}, NUMBER = {6}, PAGES = {489--510}, TITLE = {Computing the Diameter of a Point Set}, VOLUME = {12}, YEAR = {2002}, ABSTRACT = {Given a finite set of points ${\cal P}$ in ${\R}^d$, the diameter of $\cal P$ is defined as the maximum distance between two points of $\cal P$. We propose a very simple algorithm to compute the diameter of a finite set of points. Although the algorithm is not worst-case optimal, an extensive experimental study has shown that it is extremely fast for a large variety of point distributions. In addition, we propose a comparison with the recent approach of Har-Peled and derive hybrid algorithms to combine advantages of both approaches.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {computational geometry, diameter, width, approximation, point sets, furthest neighbors, double normal}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/malandain-ijcga-2002.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Picinbono-CRAS02, AUTHOR = {G. Picinbono and H. Delingette and N. Ayache}, JOURNAL = {Les Comptes Rendus de l'Académie des Sciences (CRAS), C.R. Biologies}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {4}, PAGES = {335-344}, TITLE = {Modèle déformable élastique non-linéaire pour la simulation de chirurgie en temps réel}, VOLUME = {325}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {journal, simulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/Picinbono-cras.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Picinbono:VCA:01, AUTHOR = {G. Picinbono and J-C. Lombardo and H. Delingette and N. Ayache}, JOURNAL = {Journal of Visualisation and Computer Animation}, MONTH = {July}, OPTNOTE = {}, NUMBER = {3}, PAGES = {147-167}, TITLE = {Improving realism of a surgery simulator: linear anisotropic elasticity, complex interactions and force extrapolation}, VOLUME = {13}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {journal, simulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/Picinbono-vca.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Pitiot:TMI:02, AUTHOR = {Alain Pitiot and Paul M. Thompson and Arthur W. Toga}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {August}, OPTNOTE = {}, NUMBER = {8}, PAGES = {910--923}, TITLE = {Adaptive Elastic Segmentation of Brain MRI via Shape Model Guided Evolutionary Programming}, VOLUME = {21}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {MRI}, URL = {https://www-sop.inria.fr/asclepios/Publications/Pitiot/pitiot-tmi-21-8.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Prima:TMI:02, AUTHOR = {S. Prima and S. Ourselin and N. Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {February}, OPTNOTE = {}, NUMBER = {2}, PAGES = {122--138}, TITLE = {Computation of the Mid-Sagittal Plane in 3D Brain Images}, VOLUME = {21}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching}, URL = {https://www-sop.inria.fr/asclepios/Publications/Prima/tmi.final.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Prima/tmi.final.ps.gz}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Rey:MEDIA:02, AUTHOR = {David Rey and Gérard Subsol and Hervé Delingette and Nicholas Ayache}, JOURNAL = {Medical Image Analysis}, MONTH = {June}, OPTNOTE = {}, NUMBER = {2}, PAGES = {163-179}, TITLE = {Automatic Detection and Segmentation of Evolving Processes in 3D Medical Images: Application to Multiple Sclerosis}, VOLUME = {6}, YEAR = {2002}, ABSTRACT = {The study of temporal series of medical images can be helpful for physicians to perform pertinent diagnoses and to help them in the follow-up of a patient: in some diseases, lesions, tumors or anatomical structures vary over time in size, position, composition, etc., either because of a natural pathological process or under the effect of a drug or a therapy. It is a laborious and subjective task to visually and manually analyze such images. Thus the objective of this work was to automatically detect regions with apparent local volume variation with a vector field operator applied to the local displacement field obtained after a non-rigid registration between two successive temporal images. On the other hand, quantitative measurements, such as the volume variation of lesions or segmentation of evolving lesions, are important. By studying the information of apparent shrinking areas in the direct and reverse displacement fields between images, we are able to segment evolving lesions. Then we propose a method to segment lesions in a whole temporal series of images. In this article we apply this approach to automatically detect and segment multiple sclerosis lesions that evolve in time series of MRI scans of the brain. At this stage, we have only applied the approach to a few experimental cases to demonstrate its potential. A clinical validation remains to be done, which will require important additional work.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Automation, Brain, pathology, Human, Image Processing Computer-Assisted, methods, Imaging Three-Dimensional, methods, Magnetic Resonance Imaging, methods, Models Neurological, Multiple Sclerosis, diagnosis, Reproducibility of Results, Sensitivity and Specificity, Support Non-U.S. Gov't}, URL = {https://www-sop.inria.fr/asclepios/Publications/Rey/rey-media-2002.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Ayache:IMIA:02, OPTADDRESS = {}, AUTHOR = {N. Ayache}, BOOKTITLE = {Medical Imaging Informatics (IMIA Yearbook of Medical Informatics)}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {R Haux and C Kulikowski}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Schattauer Verlagsgesellschaft mbH, Stuttgart}, OPTSERIES = {}, TITLE = {Medical Imaging Informatics. From Digital Anatomy to Virtual Scapels and Image Guided Therapy}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, ISBN = {3-7945-2193-5}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/ayache-preface-yearbook02.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Subsol-BAR-2002, OPTADDRESS = {}, AUTHOR = {G. Subsol and B. Mafart and A. Silvestre and de Lumley, M.A.}, BOOKTITLE = {Three-Dimensional Imaging in Paleoanthropology and Prehistoric Archaeology}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {B. Mafart and H. Delingette and G. Subsol}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {37--45}, PUBLISHER = {BAR International Series 1049}, OPTSERIES = {}, TITLE = {3D Image Processing for the Study of the Evolution of the Shape of the Human Skull: Presentation of the Tools and Preliminary Results}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.lirmm.fr/~subsol/BAR.0901.a.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Delingette:CVIU:01, AUTHOR = {H. Delingette and J. Montagnat}, JOURNAL = {Computer Vision and Image Understanding}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, PAGES = {140--171}, TITLE = {Shape and Topology Constraints on Parametric Active Contours}, VOLUME = {83}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {journal, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/cviu-2001.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Guimon:Roche:TMI:01, AUTHOR = {A. Guimond and A. Roche and N. Ayache and J. Meunier}, JOURNAL = {IEEE Transactions on Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1}, PAGES = {58--69}, TITLE = {Multimodal Brain Warping Using the Demons Algorithm and Adaptative Intensity Corrections}, VOLUME = {20}, YEAR = {2001}, ABSTRACT = {This paper presents an original method for three-dimensional elastic registration of multimodal images. We propose to make use of a scheme that iterates between correcting for intensity differences between images and performing standard monomodal registration. The core of our contribution resides in providing a method that finds the transformation that maps the intensities of one image to those of another. It makes the assumption that there are at most two functional dependencies between the intensities of structures present in the images to register, and relies on robust estimation techniques to evaluate these functions. We provide results showing successful registration between several imaging modalities involving segmentations, T1 magnetic resonance (MR), T2 MR, proton density (PD) MR and computed tomography (CT). We also argue that our intensity modeling may be more appropriate than mutual information (MI) in the context of evaluating high-dimensional deformations, as it puts more constraints on the parameters to be estimated and, thus, permits a better search of the parameter space.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, deformations}, URL = {https://www-sop.inria.fr/asclepios/Publications/Roche/tmi01.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Roche/tmi01.ps.gz}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Linguraru:Acta:01, AUTHOR = {M.G. Linguraru and J.M. Brady}, JOURNAL = {Acta Universitatis Cibiniensis, Technical Series}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {49--60}, TITLE = {An Anisotropic Diffusion Approach for Early Detection of Breast Cancer}, VOLUME = {XLIII}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Linguraru/Linguraru_ACTA_2001.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Gonzalez:MedReview:2001, AUTHOR = {Y. Machida and Y. Hamamura and González Ballester, M. A. and S. Nozaki and K. Okamoto and S. Uchizono and N. Ichinose and Y. Kassai and H. Kanazawa and Y. Usui}, JOURNAL = {Medical Review}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {52-58}, TITLE = {Development of MR Parallel Imaging, SPEEDER (in Japanese)}, VOLUME = {83}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Migneco:Neuroimage:01, AUTHOR = {O. Migneco and M. Benoit and P.M. Koulibaly and I. Dygai and C. Bertogliati and P. Desvignes and Ph. Robert and G. Malandain and F. Bussière and J. Darcourt}, JOURNAL = {NeuroImage}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {5}, PAGES = {896--902}, TITLE = {Perfusion brain SPECT and Statistical Parametric Mapping analysis indicate that apathy is a cingulate syndrome: a study in Alzheimer's disease and non-demented patients}, VOLUME = {13}, YEAR = {2001}, ABSTRACT = {Apathy is the most frequent behavioral symptom in Alzheimer's disease and is also frequently reported in other brain organic disorders occurring in the elderly. Based on the literature, we hypothesized that apathy was related to an anterior cingulate hypofunction. Forty-one subjects were studied. According to ICD 10 diagnostic criteria, 28 patients had Alzheimer dementia (demented: diagnostic group 1), and 13 had organic personality disorders or mild cognitive impairment not attributable to dementia (nondemented: diagnostic group 2). Apathy was evaluated by the Neuro-Psychiatric Inventory. As a result each diagnostic group was divided into two symptomatic subgroups: apathetic or nonapathetic. Brain perfusion was measured by 99mTc-labeled bicisate (ECD) brain SPECT and the images were compared using Statistical Parametric Mapping (SPM96). We began by comparing apathetic vs nonapathetic patients, whatever their diagnostic group (whole population), then analyzed them within each group. Twenty-one subjects were apathetic (14 in group 1 and 7 in group 2) and 20 were not (14 in group 1 and 6 in group 2). For the whole population, the Z map showed a significant decrease in ECD uptake for the apathetic patients in the anterior cingulate (P < 0.002) bilaterally. This area was also identified as hypoactive by SPM analysis in the demented (P < 0.035) and in the nondemented (P < 0.02) apathetic patient groups. Finally, conjunction analysis indicated that the anterior cingulate was the common hypoactive structure of the two apathetic subgroups (Z = 4.35, P < 0.0009). These results point to a close relationship between apathy and the anterior cingulate region.}, DOI = {10.1006/nimg.2000.0741}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {apathy, cingulate, statistical parametric mapping, ECD}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Montagnat:IVC:01, AUTHOR = {J. Montagnat and H. Delingette and N. Ayache}, JOURNAL = {Image and Vision Computing}, MONTH = {December}, OPTNOTE = {}, NUMBER = {14}, PAGES = {1023-1040}, TITLE = {A review of deformable surfaces: topology, geometry and deformation}, VOLUME = {19}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {journal, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/ivc00.montagnat.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Ourselin:IVC:01, AUTHOR = {Sébastien Ourselin and Alexis Roche and Gérard Subsol and Xavier Pennec and Nicholas Ayache}, JOURNAL = {Image and Vision Computing}, MONTH = {January}, OPTNOTE = {}, NUMBER = {1-2}, PAGES = {25--31}, TITLE = {Reconstructing a 3D Structure from Serial Histological Sections}, VOLUME = {19}, YEAR = {2001}, OPTABSTRACT = {}, DOI = {10.1016/S0262-8856(00)00052-4}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, histology}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Ourselin_Roche_IVC2001.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/cea-00333669/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Roche:TMI:01, AUTHOR = {Alexis Roche and Xavier Pennec and Grégoire Malandain and Nicholas Ayache}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {October}, OPTNOTE = {}, NUMBER = {10}, PAGES = {1038--1049}, TITLE = {Rigid Registration of 3D Ultrasound with MR Images: a New Approach Combining Intensity and Gradient Information}, VOLUME = {20}, YEAR = {2001}, ABSTRACT = {We present a new image-based technique to rigidly register intraoperative three-dimensional ultrasound (US) with preoperative magnetic resonance (MR) images. Automatic registration is achieved by maximization of a similarity measure which generalizes the correlation ratio, and whose novelty is to incorporate multivariate information from the MR data (intensity and gradient). In addition, the similarity measure is built upon a robust intensity-based distance measure, which makes it possible to handle a variety of US artifacts. A cross-validation study has been carried out using a number of phantom and clinical data. This indicates that the method is quite robust and that the worst registration errors are of the order of the MR image resolution.}, DOI = {10.1109/42.959301}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, ultrasound, magnetic resonance, correlation ratio, robust estimation, multimodal}, URL = {https://www-sop.inria.fr/asclepios/Publications/Roche/Roche_MR_US_TMI_2001.pdf}, URL-PUBLISHER = {http://ieeexplore.ieee.org/xpl/tocresult.jsp?isYear=2001&isnumber=20734}, PMID = {11686439}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Roche/roche-tmi01.ps.gz}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/cea-00333699/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{soler:cas:2001, AUTHOR = {L Soler and H Delingette and G Malandain and J Montagnat and N Ayache and C Koehl and O Dourthe and B Malassagne and M Smith and D Mutter and J Marescaux}, JOURNAL = {Comput Aided Surg}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {3}, PAGES = {131-42}, TITLE = {Fully automatic anatomical, pathological, and functional segmentation from CT scans for hepatic surgery}, VOLUME = {6}, YEAR = {2001}, ABSTRACT = {OBJECTIVE: To improve the planning of hepatic surgery, we have developed a fully automatic anatomical, pathological, and functional segmentation of the liver derived from a spiral CT scan. MATERIALS AND METHODS: From a 2 mm-thick enhanced spiral CT scan, the first stage automatically delineates skin, bones, lungs, kidneys, and spleen by combining the use of thresholding, mathematical morphology, and distance maps. Next, a reference 3D model is immersed in the image and automatically deformed to the liver contours. Then an automatic Gaussian fitting on the imaging histogram estimates the intensities of parenchyma, vessels, and lesions. This first result is next improved through an original topological and geometrical analysis, providing an automatic delineation of lesions and veins. Finally, a topological and geometrical analysis based on medical knowledge provides hepatic functional information that is invisible in medical imaging: portal vein labeling and hepatic anatomical segmentation according to the Couinaud classification. RESULTS: Clinical validation performed on more than 30 patients shows that delineation of anatomical structures by this method is often more sensitive and more specific than manual delineation by a radiologist. CONCLUSION: This study describes the methodology used to create the automatic segmentation of the liver with delineation of important anatomical, pathological, and functional structures from a routine CT scan. Using the methods proposed in this study, we have confirmed the accuracy and utility of the creation of a 3D liver model compared with the conventional reading of the CT scan by a radiologist. This work may allow improved preoperative planning of hepatic surgery by more precisely delineating liver pathology and its relationship to normal hepatic structures. In the future, this data may be integrated with computer-assisted surgery and thus represents a first step towards the development of an augmented-reality surgical system.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Human, Image Processing Computer-Assisted, methods, Liver, anatomy & histology, Support Non-U.S. Gov't, Surgery Computer-Assisted, Tomography X-Ray Computed}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/cas2001_soler.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{ayache2000, AUTHOR = {N. Ayache}, JOURNAL = {Technique et Science Informatiques}, MONTH = {January}, OPTNOTE = {}, NUMBER = {1}, OPTPAGES = {}, TITLE = {Imagerie et robotique médicales: du microscope informatique au simulateur de chirurgie}, VOLUME = {19}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{cotinVisualComputer, AUTHOR = {S. Cotin and H. Delingette and N. Ayache}, JOURNAL = {The Visual Computer}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {8}, PAGES = {437--452}, TITLE = {A Hybrid Elastic Model allowing Real-Time Cutting, Deformations and Force-Feedback for Surgery Training and Simulation}, VOLUME = {16}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {journal, simulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/TensorMass-VC2000.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{ayache2000b, AUTHOR = {J. Duncan and N. Ayache}, JOURNAL = {IEEE Transactions on Pattern Analysis and Machine Intelligence}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1}, PAGES = {85--106}, TITLE = {Medical Image Analysis: Progress over two decades and the challenges ahead}, VOLUME = {22}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/Ayache_Duncan_2000.pdf}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Gonzalez:Media:2000, AUTHOR = {González Ballester, M. A. and A. Zisserman and M. Brady}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {3}, PAGES = {189--200}, PUBLISHER = {Elsevier}, TITLE = {Segmentation and Measurement of Brain Structures in MRI Including Confidence Bounds}, VOLUME = {4}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gonzalez/Gonzalez_MedIA_2000.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{guimond99.1, AUTHOR = {A. Guimond and J. Meunier and J.-P. Thirion}, JOURNAL = {Computer Vision and Image Understanding}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, PAGES = {192-210}, TITLE = {Average Brain Models: A Convergence Study}, VOLUME = {77}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {atlas}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{krissian-al2000, AUTHOR = {K. Krissian and G. Malandain and N. Ayache and R. Vaillant and Y. Trousset}, JOURNAL = {Computer Vision and Image Understanding}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, PAGES = {130--171}, TITLE = {Model-Based Detection of Tubular Structures in 3D Images}, VOLUME = {80}, YEAR = {2000}, ABSTRACT = {Detection of tubular structures in 3D images is an important issue for vascular detection in medical imaging. We present in this paper a new approach for centerline detection and reconstruction of 3D tubular structures. Several models of vessels are introduced for estimating the sensivity of the image second order derivatives according to elliptical cross-section, to curvature of the axis, or to partial volume effects. Our approach uses a multiscale analysis for extracting vessels of different sizes according to the scale. For a given model of vessel, we derive an analytic expression of the relationship between the radius of the structure and the scale at which it is detected. The algorithm gives both centerline extraction and radius estimation of the vessels allowing their reconstruction. The method has been tested on both synthetic and real images, with encouraging results. This work was done in collaboration with GEMS (General Electric Medical Systems, Buc, France).}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {filtering, vessel detection, multiscale analysis, segmentation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/krissian-cviu-2000.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Roche:IJST:2000, AUTHOR = {A. Roche and G. Malandain and N. Ayache}, JOURNAL = {International Journal of Imaging Systems and Technology}, OPTMONTH = {}, NOTE = {Special Issue on 3D Imaging}, NUMBER = {1}, PAGES = {71--80}, PUBLISHER = {John Wiley and Sons, inc.}, TITLE = {Unifying Maximum Likelihood Approaches in Medical Image Registration}, VOLUME = {11}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, similarity measures}, URL = {https://www-sop.inria.fr/asclepios/Publications/Roche/ijist00.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Roche/roche-ijist.ps.gz}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/cea-00333642/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{soler:shti:2000, AUTHOR = {L Soler and H Delingette and G Malandain and N Ayache and C Koehl and J M Clement and O Dourthe and J Marescaux}, JOURNAL = {Stud Health Technol Inform}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {316-22}, TITLE = {An automatic virtual patient reconstruction from CT-scans for hepatic surgical planning}, VOLUME = {70}, YEAR = {2000}, ABSTRACT = {PROBLEM/BACKGROUND: In order to help hepatic surgical planning we perfected automatic 3D reconstruction of patients from conventional CT-scan, and interactive visualization and virtual resection tools. TOOLS AND METHODS: From a conventional abdominal CT-scan, we have developed several methods allowing the automatic 3D reconstruction of skin, bones, kidneys, lung, liver, hepatic lesions, and vessels. These methods are based on deformable modeling or thresholding algorithms followed by the application of mathematical morphological operators. From these anatomical and pathological models, we have developed a new framework for translating anatomical knowledge into geometrical and topological constraints. More precisely, our approach allows to automatically delineate the hepatic and portal veins but also to label the portal vein and finally to build an anatomical segmentation of the liver based on Couinaud definition which is currently used by surgeons all over the world. Finally, we have developed a user friendly interface for the 3D visualization of anatomical and pathological structures, the accurate evaluation of volumes and distances and for the virtual hepatic resection along a user-defined cutting plane. RESULTS: A validation study on a 30 patients database gives 2 mm of precision for liver delineation and less than 1 mm for all other anatomical and pathological structures delineation. An in vivo validation performed during surgery also showed that anatomical segmentation is more precise than the delineation performed by a surgeon based on external landmarks. This surgery planning system has been routinely used by our medical partner, and this has resulted in an improvement of the planning and performance of hepatic surgery procedures. CONCLUSION: We have developed new tools for hepatic surgical planning allowing a better surgery through an automatic delineation and visualization of anatomical and pathological structures. These tools represent a first step towards the development of an augmented reality system combined with computer assisted tele-robotical surgery.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Computer Graphics, Computer Simulation, Hepatectomy, Human, Image Processing Computer-Assisted, Liver Diseases, radiography, Tomography X-Ray Computed, User-Computer Interface}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/soler-shti-2000.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Thirion00a, AUTHOR = {J.-P. Thirion and S. Prima and G. Subsol and N. Roberts}, JOURNAL = {Medical Image Analysis}, MONTH = {June}, OPTNOTE = {}, NUMBER = {2}, PAGES = {111--121}, TITLE = {Statistical Analysis of Normal and Abnormal Dissymmetry in Volumetric Medical Images}, VOLUME = {4}, YEAR = {2000}, ABSTRACT = {We present a general method to study the dissymmetry of anatomical structures such as those found in the human brain. Our method relies on the estimate of 3D dissymmetry fields, the use of 3D vector field operators, and T2 statistics to compute significance maps. We also present a fully automated implementation of this method which relies mainly on the intensive use of a 3D non-rigid inter-patient matching tool. Such a tool is applied successively between the images and their symmetric versions with respect to an arbitrary plane, both to realign the images with respect to the mid-plane of the subject and to compute a dense 3D dissymmetry map. Inter-patient matching is also used to fuse the data of a population of subjects. We then describe three main application fields: the study of the normal dissymmetry within a given population, the comparison of the dissymmetry between two populations, and the detection of the significant abnormal dissymmetries of a patient with respect to a reference population. Finally, we present preliminary results illustrating these three applications for the case of the human brain.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Aphasia, pathology, Brain, anatomy & histology, Computer Simulation, Epilepsies Partial, pathology, Human, Image Processing Computer-Assisted, Imaging Three-Dimensional, Laterality, Magnetic Resonance Imaging, Male}, URL = {https://www-sop.inria.fr/asclepios/Publications/Thirion/Thirion00a.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/RR-3178.html}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073511/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Pennec:HMIP:00, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Nicholas Ayache and Jean-Philippe Thirion}, BOOKTITLE = {Handbook of Medical Imaging}, CHAPTER = {31}, OPTEDITION = {}, EDITOR = {I. Bankman}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {499--513}, PUBLISHER = {Academic Press}, OPTSERIES = {}, TITLE = {Landmark-based registration using features identified through differential geometry}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, validation, uncertainty}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.HMIP.pdf}, URL-PUBLISHER = {http://www.elsevier.com/wps/find/bookdescription.cws_home/673450/description}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.HMIP.ps.gz}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616082}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Ayache99, AUTHOR = {N. Ayache and G. Subsol}, JOURNAL = {Mundo Cientifico}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {30-33}, TITLE = {El Cerebro in Cuatro Dimensiones}, VOLUME = {203}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Ayache99-1, AUTHOR = {N. Ayache and G. Subsol}, JOURNAL = {La Recherche}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {46-49}, TITLE = {Le cerveau en quatre dimensions}, VOLUME = {320}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.lirmm.fr/~subsol/laRecherche.0599.pdf}, URL-PUBLISHER = {http://www.larecherche.fr/arch/99/05}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{cotin99, AUTHOR = {S. Cotin and H. Delingette and N. Ayache}, JOURNAL = {IEEE Transactions on Visualization and Computer Graphics}, MONTH = {January-March}, OPTNOTE = {}, NUMBER = {1}, PAGES = {62--73}, TITLE = {Real-time elastic deformations of soft tissues for surgery simulation}, VOLUME = {5}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {journal, simulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/paper_tvcg.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{delingette-ijcv99, AUTHOR = {H. Delingette}, JOURNAL = {International Journal of Computer Vision}, MONTH = {September}, OPTNOTE = {}, NUMBER = {2}, PAGES = {111-146}, TITLE = {General Object Reconstruction based on Simplex Meshes}, VOLUME = {32}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {journal, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/ijcv99.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{dugelay-tsi99, AUTHOR = {J.-L. Dugelay and K. Fintzel and S. Valente and H. Delingette}, JOURNAL = {Traitement du signal}, MONTH = {July}, OPTNOTE = {}, NUMBER = {1}, PAGES = {60--72}, TITLE = {Clonage de visage et spatialisation video : Outils pour la téléconférence virtuelle}, VOLUME = {16}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {journal, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/tsi-dugelay99.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Ourselin99.2, AUTHOR = {S. Ourselin and C. Sattonnet and A. Roche and G. Subsol}, JOURNAL = {Analytical Cellular Pathology}, OPTMONTH = {}, NOTE = {Abstracts of the 1999 Annual Meeting of the Association Française de Cytométrie, Dijon, 12-15 October 1999}, NUMBER = {3}, PAGES = {123}, TITLE = {Automatic alignement of histological sections for 3D reconstruction and analysis}, VOLUME = {18}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, histology, MRI}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Thirion99, AUTHOR = {J.-P. Thirion and G. Calmon}, JOURNAL = {IEEE Transactions on Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {5}, PAGES = {429-441}, TITLE = {Deformation Analysis to Detect and Quantify Active Lesions in Three-Dimensional Medical Image Sequences}, VOLUME = {18}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Lesion, mass effect, motion field analysis, multiple sclerosis, stereology, volume measurement}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/thirion-tmi-1999.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{webb99.1, AUTHOR = {J. Webb and A. Guimond and N. Roberts and P. Eldridge and D. Chadwick and J. Meunier and J.-P. Thirion}, JOURNAL = {Magnetic Resonance Imaging}, MONTH = {April}, OPTNOTE = {}, NUMBER = {8}, PAGES = {1149-1161}, TITLE = {Automatic detection of hippocampal atrophy on magnetic resonance images}, VOLUME = {17}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{ayache-pasteur98, AUTHOR = {Nicholas Ayache}, JOURNAL = {Annales de l'Institut Pasteur}, MONTH = {avril--juin}, NOTE = {numéro spécial sur les progrès récents de l'imagerie médicale}, NUMBER = {1}, PAGES = {13--21}, PUBLISHER = {Elsevier}, TITLE = {L'analyse automatique des images médicales, état de l'art et perspectives}, VOLUME = {9}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{cotin_mitat, AUTHOR = {N. Ayache and S. Cotin and H. Delingette and J.-M. Clément and J. Marescaux and M. Nord}, JOURNAL = {Journal of Minimally Invasive Therapy and Allied Technologies (MITAT)}, MONTH = {July}, OPTNOTE = {}, NUMBER = {2}, PAGES = {71-77}, TITLE = {Simulation of Endoscopic Surgery}, VOLUME = {7}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {journal, simulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/mitat.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Bardinet:CVIU:98, AUTHOR = {Eric Bardinet and Laurent D. Cohen and Nicholas Ayache}, JOURNAL = {Computer Vision and Image Understanding}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1}, PAGES = {39--54}, TITLE = {A parametric deformable model to fit unstructured 3D data}, VOLUME = {71}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Misc/CVIU_Bardinet.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Benayoun:IJCV:98, AUTHOR = {Serge Benayoun and Nicholas Ayache}, JOURNAL = {International Journal of Computer Vision}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1}, PAGES = {25--40}, TITLE = {Dense non-rigid motion estimation in sequences of medical images using differential constraints}, VOLUME = {26}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, deformations, motion tracking}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/BenayounIJCV1998.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Declerck-98.6, AUTHOR = {J. Declerck and J. Feldmar and N. Ayache}, JOURNAL = {Medical Image Analysis}, MONTH = {June}, OPTNOTE = {}, NUMBER = {2}, PAGES = {197-213}, TITLE = {Definition of a four-dimensional continuous planispheric transformation for the tracking and the analysis of left-ventricle motion}, VOLUME = {2}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Motion tracking, Heart, 4D}, URL = {https://www-sop.inria.fr/asclepios/Publications/Misc/MEDIA2_2.2.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{delingette_ieee98, AUTHOR = {H. Delingette}, JOURNAL = {Proceedings of the IEEE}, MONTH = {April}, NOTE = {Special Issue on Surgery Simulation}, OPTNUMBER = {}, PAGES = {512--523}, TITLE = {Towards Realistic Soft Tissue Modeling in Medical Simulation}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {journal, simulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/ieee-proceedings98.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Fidrich98d, AUTHOR = {Márta Fidrich}, JOURNAL = {Image and Vision Computing}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {8}, PAGES = {545-556}, TITLE = {Iso-surface Extraction in $n$-D applied to Tracking Feature Curves across Scale}, VOLUME = {16}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Fidrich98b, AUTHOR = {Márta Fidrich and Jean-Philippe Thirion}, JOURNAL = {Computer Vision and Image Understanding}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1}, PAGES = {72--83}, TITLE = {Stability of Corner Points in Scale Space: The Effect of Small Non-Rigid Deformations}, VOLUME = {72}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{malandain-vidal98, AUTHOR = {G. Malandain and S. Fernández-Vidal}, JOURNAL = {Image and Vision Computing}, MONTH = {April}, OPTNOTE = {}, NUMBER = {5}, PAGES = {317--327}, TITLE = {Euclidean Skeletons}, VOLUME = {16}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/malandain-ivc-1998.ps.gz}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{marescaux:as:1998, AUTHOR = {J Marescaux and J M Clement and V Tassetti and C Koehl and S Cotin and Y Russier and D Mutter and H Delingette and N Ayache}, JOURNAL = {Annals of Surgery}, MONTH = {November}, OPTNOTE = {}, NUMBER = {5}, PAGES = {627-34}, TITLE = {Virtual reality applied to hepatic surgery simulation: the next revolution}, VOLUME = {228}, YEAR = {1998}, ABSTRACT = {OBJECTIVE: This article describes a preliminary work on virtual reality applied to liver surgery and discusses the repercussions of assisted surgical strategy and surgical simulation on tomorrow's surgery. SUMMARY BACKGROUND DATA: Liver surgery is considered difficult because of the complexity and variability of the organ. Common generic tools for presurgical medical image visualization do not fulfill the requirements for the liver, restricting comprehension of a patient's specific liver anatomy. METHODS: Using data from the National Library of Medicine, a realistic three-dimensional image was created, including the envelope and the four internal arborescences. A computer interface was developed to manipulate the organ and to define surgical resection planes according to internal anatomy. The first step of surgical simulation was implemented, providing the organ with real-time deformation computation. RESULTS: The three-dimensional anatomy of the liver could be clearly visualized. The virtual organ could be manipulated and a resection defined depending on the anatomic relations between the arborescences, the tumor, and the external envelope. The resulting parts could also be visualized and manipulated. The simulation allowed the deformation of a liver model in real time by means of a realistic laparoscopic tool. CONCLUSIONS: Three-dimensional visualization of the organ in relation to the pathology is of great help to appreciate the complex anatomy of the liver. Using virtual reality concepts (navigation, interaction, and immersion), surgical planning, training, and teaching for this complex surgical procedure may be possible. The ability to practice a given gesture repeatedly will revolutionize surgical training, and the combination of surgical planning and simulation will improve the efficiency of intervention, leading to optimal care delivery.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Computer Simulation, Digestive System Surgical Procedures, methods, Image Processing Computer-Assisted, Liver, surgery, Support Non-U.S. Gov't, journal, simulation}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{marescaux:chirurgie:1998, AUTHOR = {J Marescaux and J M Clement and M Vix and Y Russier and V Tassetti and D Mutter and S Cotin and N Ayache}, JOURNAL = {Chirurgie}, MONTH = {February}, NOTE = {in french}, NUMBER = {1}, PAGES = {16-24}, TITLE = {[A new concept in surgery of the digestive tract: surgical procedure assisted by computer, from virtual reality to telemanipulation]}, VOLUME = {123}, YEAR = {1998}, ABSTRACT = {Surgical simulation increasingly appears to be an essential aspect of tomorrow's surgery. The development of a hepatic surgery simulator is an advanced concept calling for a new writing system which will transform the medical world: virtual reality. Virtual reality extends the perception of our five senses by representing more than the real state of things by the means of computer sciences and robotics. It consists of three concepts: immersion, navigation and interaction. Three reasons have led us to develop this simulator: the first is to provide the surgeon with a comprehensive visualisation of the organ. The second reasons is to allow for planning and surgical simulation that could be compared with the detailed flight-plan for a commercial jet pilot. The third lies in the fact that virtual reality is an integrated part of the concept of computer assisted surgical procedure. The project consists of a sophisticated simulator which must include five requirements: a) visual fidelity, b) interactivity, c) physical properties, d) physiological properties, e) sensory input and output. In this report we describe how to obtain a realistic 3D model of the liver from bi-dimensional 2D medical images for anatomical and surgical training. The introduction of a tumor and the consequent planning and virtual resection is also described, as are force feedback and real-time interaction.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Anatomy Cross-Sectional, Computer Simulation, English Abstract, Forecasting, Hepatectomy, instrumentation, Human, Image Processing Computer-Assisted, instrumentation, Liver Neoplasms, surgery, Phantoms Imaging, Robotics, instrumentation, Surgical Procedures Operative, trends, User-Computer Interface}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Montagnat-SPAIJ98, AUTHOR = {J. Montagnat and H. Delingette}, JOURNAL = {Signal Processing}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, PAGES = {173--186}, TITLE = {Globally constrained deformable models for 3D object reconstruction}, VOLUME = {71}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {journal, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/spaij.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Pennec:Videre:98, AUTHOR = {Xavier Pennec}, JOURNAL = {Videre: Journal of Computer Vision Research}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, PAGES = {58--87}, TITLE = {Toward a generic framework for recognition based on uncertain geometric features}, VOLUME = {1}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, uncertainty}, URL = {http://mitpress.mit.edu/e-journals/Videre/001/articles/v1n2003.pdf}, URL-PUBLISHER = {http://mitpress.mit.edu/e-journals/Videre/001/v12.html}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Pennec:CABIOS:98, AUTHOR = {Xavier Pennec and Nicholas Ayache}, JOURNAL = {Bioinformatics}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {6}, PAGES = {516--522}, TITLE = {A geometric algorithm to find small but highly similar 3D substructures in proteins}, VOLUME = {14}, YEAR = {1998}, OPTABSTRACT = {}, DOI = {10.1093/bioinformatics/14.6.516}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, protein structure}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.Bioinformatics98.pdf}, URL-PUBLISHER = {http://bioinformatics.oxfordjournals.org/cgi/content/abstract/14/6/516}, PMID = {9694990}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.Bioinformatics98.official.ps.gz}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Pennec:JMIV:98, AUTHOR = {Xavier Pennec and Nicholas Ayache}, JOURNAL = {Journal of Mathematical Imaging and Vision}, MONTH = {July}, NOTE = {A preliminary version appeared as INRIA Research Report 2820, March 1996.}, NUMBER = {1}, PAGES = {49--67}, TITLE = {Uniform distribution, distance and expectation problems for geometric features processing}, VOLUME = {9}, YEAR = {1998}, OPTABSTRACT = {}, DOI = {10.1023/A:1008270110193}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {statistics, geometry, Riemannian geometry}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.JMIV98.pdf}, URL-PUBLISHER = {http://www.springerlink.com/openurl.asp?genre=article&issn=0924-9907&volume=9&issue=1&spage=49}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.JMIV98.ps.gz}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615085}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{robert-al98, AUTHOR = {L. Robert and G. Malandain}, JOURNAL = {Computer Vision and Image Understanding}, MONTH = {October}, OPTNOTE = {}, NUMBER = {1}, PAGES = {1--9}, TITLE = {Fast Binary Image Processing Using Binary Decision Diagrams}, VOLUME = {72}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{soler-tsi98, AUTHOR = {L. Soler and G. Malandain and H. Delingette}, JOURNAL = {Traitement du signal}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {5}, PAGES = {411-431}, TITLE = {Segmentation automatique : application aux angioscanners 3D du foie}, VOLUME = {15}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {journal, reconstruction}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Subsol98, AUTHOR = {G. Subsol and J.-Ph. Thirion and N. Ayache}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1}, PAGES = {37-60}, TITLE = {A Scheme for Automatically Building 3D Morphometric Anatomical Atlases: application to a Skull Atlas}, VOLUME = {2}, YEAR = {1998}, ABSTRACT = {We present a general scheme for automatically building a morphometric anatomical atlas. We detail each stage of the method, including the non-rigid registration algorithm, three-dimensional line averaging and statistical processes. We apply the method to obtain a quantitative atlas of skull crest lines. Finally, we use the resulting atlas to study a craniofacial disease; we show how we can obtain qualitative and quantitative results by contrasting a skull affected by a mandible deformation with the atlas.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, atlas, deformations, Algorithms, Anatomy Artistic, methods, Comparative Study, Craniofacial Abnormalities, pathology, Diagnosis Computer-Assisted, methods, Human, Medical Illustration, Skull, anatomy & histology}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/SubsolMedia1998.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Thirion98, AUTHOR = {J.-P. Thirion}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {3}, PAGES = {243--260}, TITLE = {Image matching as a diffusion process: an analogy with Maxwell's demons}, VOLUME = {2}, YEAR = {1998}, ABSTRACT = {In this paper, we present the concept of diffusing models to perform image-to-image matching. Having two images to match, the main idea is to consider the objects boundaries in one image as semi-permeable membranes and to let the other image, considered as a deformable grid model, diffuse through these interfaces, by the action of effectors situated within the membranes. We illustrate this concept by an analogy with Maxwell's demons. We show that this concept relates to more traditional ones, based on attraction, with an intermediate step being optical flow techniques. We use the concept of diffusing models to derive three different non-rigid matching algorithms, one using all the intensity levels in the static image, one using only contour points, and a last one operating on already segmented images. Finally, we present results with synthesized deformations and real medical images, with applications to heart motion tracking and three-dimensional inter-patients matching.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, deformations, Algorithms, Animals, Brain, anatomy & histology, Computer Simulation, Diagnostic Imaging, methods, Dogs, Heart, anatomy & histology, Human, Image Processing Computer-Assisted, methods, Models Theoretical, Thermodynamics}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/thirion-media-1998.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{ayache-isrr98, OPTADDRESS = {}, AUTHOR = {Nicholas Ayache and Stephane Cotin and Hervé Delingette}, BOOKTITLE = {Robotics Research, the Eigth International Symposium}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {Y. Shirai and S. Hirose}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {311--316}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {Surgery Simulation with visual and haptic feedback}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, simulation}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Subsol98.2, OPTADDRESS = {}, AUTHOR = {G. Subsol}, BOOKTITLE = {Brain Warping}, CHAPTER = {13}, OPTEDITION = {}, EDITOR = {A. W. Toga}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {225-246}, PUBLISHER = {Academic Press}, OPTSERIES = {}, TITLE = {Crest Lines for Curve Based Warping}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{Thirion98b, OPTADDRESS = {}, AUTHOR = {J.-P. Thirion}, BOOKTITLE = {Brain Warping}, CHAPTER = {9}, OPTEDITION = {}, EDITOR = {A. W. Toga}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {143--155}, PUBLISHER = {Academic Press}, OPTSERIES = {}, TITLE = {Diffusing Models and Applications}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{chauvel:frto:1997, AUTHOR = {P Chauvel and W Sauerwein and N Bornfeld and W Friedrichs and N Brassart and A Courdi and J Herault and J P Pignol and P Y Bondiau and G Malandain}, JOURNAL = {Front Radiat Ther Oncol}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {133-42}, TITLE = {Clinical and technical requirements for proton treatment planning of ocular diseases. The SERAG (South Europe Radiotherapy Group)}, VOLUME = {30}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Comparative Study, Conjunctival Neoplasms, diagnosis, Dose-Response Relationship Radiation, Follow-Up Studies, Fundus Oculi, Human, Image Processing Computer-Assisted, Magnetic Resonance Imaging, Melanoma, diagnosis, Neoplasm Recurrence Local, diagnosis, Predictive Value of Tests, Protons, therapeutic use, Radiotherapy Planning Computer-Assisted, methods, Retrospective Studies, Tomography X-Ray Computed, Treatment Outcome, Uveal Neoplasms, diagnosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{cotin_rbm, AUTHOR = {S. Cotin and H. Delingette and N. Ayache and J.M. Clement and J. Marescaux and M. Nord}, JOURNAL = {Revue Européenne de Technologie Biomédicale (RBM)}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {5}, PAGES = {167--172}, TITLE = {Simulation Active de Chirurgie Endoscopique}, VOLUME = {19}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {journal, simulation}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{declerck:tmi:97, AUTHOR = {J. Declerck and J. Feldmar and M.L. Goris and F. Betting}, JOURNAL = {IEEE Transactions on Medical Imaging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {6}, PAGES = {727--737}, TITLE = {Automatic registration and alignment on a template of cardiac stress & rest SPECT reoriented images}, VOLUME = {16}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, deformations}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{ree97, AUTHOR = {H. Delingette}, JOURNAL = {Revue de la société des électriciens et des électroniciens (REE)}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {43--45}, TITLE = {Réalité virtuelle et médecine}, VOLUME = {8}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {journal, simulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/ree.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Feldmar4, AUTHOR = {J. Feldmar and N. Ayache and F. Betting}, JOURNAL = {Journal of Computer Vision and Image Understanding}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {3}, PAGES = {403-424}, TITLE = {3D-2D projective registration of free-form curves and surfaces}, VOLUME = {65}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/FeldmarCVIU1997.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{feldmar-al97, AUTHOR = {J. Feldmar and J. Declerck and G. Malandain and N. Ayache}, JOURNAL = {Computer Vision and Image Understanding}, MONTH = {May}, OPTNOTE = {}, NUMBER = {2}, PAGES = {193--206}, TITLE = {Extension of the ICP Algorithm to Non-Rigid Intensity-Based Registration of 3D Volumes}, VOLUME = {66}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, deformations}, URL = {https://www-sop.inria.fr/asclepios/Publications/Misc/CVIU-97-1.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{guimond97.3, AUTHOR = {Alexandre Guimond and Gérard Subsol and Jean-Philippe Thirion}, JOURNAL = {International Journal of Pattern Recognition and Artificial Intelligence}, MONTH = {December}, OPTNOTE = {}, NUMBER = {8}, PAGES = {1345--1366}, TITLE = {Automatic MRI Database Exploration and Applications}, VOLUME = {11}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.lirmm.fr/~subsol/IJPRAI.1297.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{GueziecPennecAyache:CSE:97, AUTHOR = {André Guéziec and Xavier Pennec and Nicholas Ayache}, JOURNAL = {IEEE Computational Science and Engineering}, MONTH = {Oct-Dec}, NOTE = {special issue on Geometric Hashing}, NUMBER = {4}, PAGES = {29--41}, TITLE = {Medical Image Registration using Geometric Hashing}, VOLUME = {4}, YEAR = {1997}, OPTABSTRACT = {}, DOI = {10.1109/99.641607}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Gueziec.Pennec.Ayache.CSE.GH.pdf}, URL-PUBLISHER = {http://computer.org/cse/cs1997/c4toc.htm}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Gueziec.Pennec.Ayache.CSE.GH.a4.ps.gz}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615068}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{marescaux:banm:1997, AUTHOR = {J Marescaux and J M Clement and M Nord and Y Russier and V Tassetti and D Mutter and S Cotin and N Ayache}, JOURNAL = {Bull Acad Natl Med}, MONTH = {November}, OPTNOTE = {}, NUMBER = {8}, PAGES = {1609-21}, TITLE = {[A new concept in digestive surgery: the computer assisted surgical procedure, from virtual reality to telemanipulation]}, VOLUME = {181}, YEAR = {1997}, ABSTRACT = {Surgical simulation increasingly appears to be an essential aspect of tomorrow's surgery. The development of a hepatic surgery simulator is an advanced concept calling for a new writing system which will transform the medical world: virtual reality. Virtual reality extends the perception of our five senses by representing more than the real state of things by the means of computer sciences and robotics. It consists of three concepts: immersion, navigation and interaction. Three reasons have led us to develop this simulator: the first is to provide the surgeon with a comprehensive visualisation of the organ. The second reason is to allow for planning and surgical simulation that could be compared with the detailed flight-plan for a commercial jet pilot. The third lies in the fact that virtual reality is an integrated part of the concept of computer assisted surgical procedure. The project consists of a sophisticated simulator which has to include five requirements: visual fidelity, interactivity, physical properties, physiological properties, sensory input and output. In this report we will describe how to get a realistic 3D model of the liver from bi-dimensional 2D medical images for anatomical and surgical training. The introduction of a tumor and the consequent planning and virtual resection is also described, as are force feedback and real-time interaction.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {review, survey, review, survey, Computer Simulation, Digestive System Surgical Procedures, English Abstract, Human, Telemedicine, User-Computer Interface}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Pennec:IJCV:97, AUTHOR = {Xavier Pennec and Jean-Philippe Thirion}, JOURNAL = {International Journal of Computer Vision}, MONTH = {December}, OPTNOTE = {}, NUMBER = {3}, PAGES = {203--229}, TITLE = {A Framework for Uncertainty and Validation of 3D Registration Methods based on Points and Frames}, VOLUME = {25}, YEAR = {1997}, OPTABSTRACT = {}, DOI = {10.1023/A:1007976002485}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, uncertainty, statistics, validation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.IJCV97.pdf}, URL-PUBLISHER = {http://www.springerlink.com/openurl.asp?genre=article&issn=0920-5691&volume=25&issue=3&spage=203}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.IJCV97.ps.gz}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615070}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{picard:sfn:1997, AUTHOR = {L Picard and E Maurincomme and M Soderman and J Feldmar and R Anxionnat and L Launay and K Ericson and G Malandain and S Bracard and E Kerrien and O Flodmark and N Ayache}, JOURNAL = {Stereotact Funct Neurosurg}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1-4 Pt 1}, PAGES = {117-20}, TITLE = {X-ray angiography in stereotactic conditions: techniques and interest for interventional neuroradiology}, VOLUME = {68}, YEAR = {1997}, ABSTRACT = {This paper reports work in progress on X-ray angiography acquired under stereotactic conditions. The objective is to be able to match multimodality images (typically {MRI} and X-ray) without a stereotactic frame but with stereotactic precision. We have identified potential problems and have studied them in detail. We conclude that, although the overall application is feasible, much work remains to be done on the estimation of the X-ray system conic projection and on automatic matching based on vascular structures.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Angiography Digital Subtraction, methods, Carotid Arteries, anatomy & histology, Cerebral Angiography, methods, Human, Image Enhancement, Magnetic Resonance Angiography, methods, Radiology Interventional, methods, Stereotaxic Techniques}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Quatrehomme97b, AUTHOR = {G. Quatrehomme and S. Cotin and G. Subsol and H. Delingette and Y. Garidel and G. Grévin and M. Fidrich}, JOURNAL = {Journal of Forensic Sciences}, MONTH = {July}, OPTNOTE = {}, NUMBER = {4}, PAGES = {649-652}, TITLE = {A Fully Three-Dimensional Method for Facial Reconstruction Based on Deformable Models}, VOLUME = {42}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {journal, medical}, URL = {http://www.lirmm.fr/~subsol/JFS.0797.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Subsol97, AUTHOR = {G. Subsol and N. Roberts and M. Doran and J.-Ph. Thirion}, JOURNAL = {Magnetic Resonance Imaging}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {8}, PAGES = {917-927}, TITLE = {Automatic Analysis of Cerebral Atrophy}, VOLUME = {15}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.lirmm.fr/~subsol/MRI.1297.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{West.etal:JCAT:97, AUTHOR = {J. West and J. M. Fitzpatrick and M. Y. Wang and B. M. Dawant and Maurer, Jr., C. R. and R. M. Kessler and R. J. Maciunas and C. Barillot and D. Lemoine and A. Collignon and F. Maes and P. Suetens and D. Vandermeulen and van den Elsen, P. A. and S. Napel and T. S. Sumanaweera and B. Harkness and P. F. Hemler and D. L. G. Hill and D. J. Hawkes and C. Studholme and J. B. A. Maintz and M. A. Viergever and G. Malandain and X. Pennec and M. E. Noz and Maguire, Jr., G. Q. and M. Pollack and C. A. Pelizzari and R. A. Robb and D. Hanson and R. P. Woods}, JOURNAL = {Journal of Computer Assisted Tomography}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {4}, PAGES = {554--566}, TITLE = {Comparison and evaluation of retrospective intermodality brain image registration techniques}, VOLUME = {21}, YEAR = {1997}, ABSTRACT = {PURPOSE: The primary objective of this study is to perform a blinded evaluation of a group of retrospective image registration techniques using as a gold standard a prospective, marker-based registration method. To ensure blindedness, all retrospective registrations were performed by participants who had no knowledge of the gold standard results until after their results had been submitted. A secondary goal of the project is to evaluate the importance of correcting geometrical distortion in MR images by comparing the retrospective registration error in the rectified images, i.e., those that have had the distortion correction applied, with that of the same images before rectification. METHOD: Image volumes of three modalities (CT, MR, and PET) were obtained from patients undergoing neurosurgery at Vanderbilt University Medical Center on whom bone-implanted fiducial markers were mounted. These volumes had all traces of the markers removed and were provided via the Internet to project collaborators outside Vanderbilt, who then performed retrospective registrations on the volumes, calculating transformations from CT to MR and/ or from PET to MR. These investigators communicated their transformations again via the Internet to Vanderbilt, where the accuracy of each registration was evaluated. In this evaluation, the accuracy is measured at multiple volumes of interest (VOIs), i.e., areas in the brain that would commonly be areas of neurological interest. A VOI is defined in the MR image and its centroid c is determined. Then, the prospective registration is used to obtain the corresponding point c' in CT or PET. To this point, the retrospective registration is then applied, producing c" in MR. Statistics are gathered on the target registration error (TRE), which is the distance between the original point c and its corresponding point c". RESULTS: This article presents statistics on the TRE calculated for each registration technique in this study and provides a brief description of each technique and an estimate of both preparation and execution time needed to perform the registration. CONCLUSION: Our results indicate that retrospective techniques have the potential to produce satisfactory results much of the time, but that visual inspection is necessary to guard against large errors.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, multimodal, validation, uncertainty}, URL = {http://www.jcat.org/pt/re/jcat/abstract.00004728-199707000-00007.htm}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615072}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{ayache:neuroimage:1996, AUTHOR = {N Ayache}, JOURNAL = {NeuroImage}, MONTH = {December}, OPTNOTE = {}, NUMBER = {3 Pt 2}, OPTPAGES = {}, TITLE = {Analyzing 3D images of the brain}, VOLUME = {4}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Brain Mapping, Computer Graphics, Human, Image Processing Computer-Assisted, Robotics, Software, User-Computer Interface}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/AyacheNeuroIm1996.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{BCA96e, AUTHOR = {E. Bardinet and L.D. Cohen and N. Ayache}, JOURNAL = {Medical Image Analysis}, OPTMONTH = {}, NOTE = {also INRIA Research Report RR-2797, INRIA Sophia-Antipolis, February 1996}, NUMBER = {2}, OPTPAGES = {}, TITLE = {Tracking and motion analysis of the left ventricle with deformable superquadrics}, VOLUME = {1}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Misc/Bardinet_MedIA_1996.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{cotin:shti:1996, AUTHOR = {S Cotin and H Delingette and M Bro-Nielsen and N Ayache and J M Clement and V Tassetti and J Marescaux}, JOURNAL = {Stud Health Technol Inform}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {139-51}, TITLE = {Geometric and physical representations for a simulator of hepatic surgery}, VOLUME = {29}, YEAR = {1996}, ABSTRACT = {Despite the large interest in simulators of minimally invasive surgery, it is still unclear to what extent simulators can achieve the task of training medical students in surgical procedures. The answer to that question is certainly linked to the realism of displays and force-feedback systems and to the level of interaction provided by the computer system. In this paper, we describe the virtual environment for anatomical and surgical training on the liver, currently under construction at INRIA. We specifically address the problems of geometric representation and physical modeling and their impact on the two aforementioned problems: realism and real-time interaction.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Computer Simulation, Education Medical, Human, Image Processing Computer-Assisted, Liver, anatomy & histology, Support Non-U.S. Gov't, User-Computer Interface}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Feldmar-ayache-ijcv96, AUTHOR = {J. Feldmar and N. Ayache}, JOURNAL = {International Journal of Computer Vision}, MONTH = {May}, OPTNOTE = {}, NUMBER = {2}, PAGES = {99--120}, TITLE = {Rigid, Affine and Locally Affine Registration of Free-Form Surfaces}, VOLUME = {18}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {matching, registration, deformations}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/FeldmarIJCV1996.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Nastar-Ayache, AUTHOR = {C. Nastar and N. Ayache}, JOURNAL = {IEEE Transactions on Pattern Analysis and Machine Intelligence}, MONTH = {novembre}, OPTNOTE = {}, NUMBER = {11}, PAGES = {1067--1079}, TITLE = {Frequency-based Non-rigid Motion Analysis: Application to Four Dimensional Medical Images}, VOLUME = {18}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/NastarTPAMI1996.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Roberts96, AUTHOR = {N. Roberts and G. Subsol and J.-Ph. Thirion and M. Puddephat and G. W. Whitehouse}, JOURNAL = {Magnetic Resonance Materials in Physics, Biology and Medicine}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, PAGES = {62-63}, TITLE = {Automatic Analysis of Deformation of the Cerebral Ventricles}, VOLUME = {4}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Subsol97.2, AUTHOR = {G. Subsol and J.-Ph. Thirion and N. Ayache}, JOURNAL = {Traitement du signal}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {6}, PAGES = {651-674}, TITLE = {Construction automatique d'atlas anatomiques morphométriques à partir d'images médicales tridimensionnelles : application à un atlas du crâne}, VOLUME = {13}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gerard.Subsol/TS.0096.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Thirion96d, AUTHOR = {J.-P. Thirion}, JOURNAL = {International Journal of Computer Vision}, MONTH = {May}, OPTNOTE = {}, NUMBER = {2}, PAGES = {121--137}, TITLE = {New Feature Points based on Geometric Invariants for 3D Image Registration}, VOLUME = {18}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Thirion96e, AUTHOR = {J.-P. Thirion}, JOURNAL = {International Journal of Computer Vision}, MONTH = {August}, OPTNOTE = {}, NUMBER = {2}, PAGES = {115--128}, TITLE = {The Extremal Mesh and the Understanding of 3D Surfaces}, VOLUME = {19}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{OFTA96, OPTADDRESS = {}, AUTHOR = {H. Delingette and G. Subsol}, BOOKTITLE = {Nouvelles Interfaces Homme-Machine}, OPTCHAPTER = {}, OPTEDITION = {}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {18}, OPTPAGES = {}, PUBLISHER = {Observatoire Français des Techniques Avancées}, SERIES = {ARAGO}, TITLE = {L'Image dans la Réalité Virtuelle}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {chapter-book, simulation}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{ayache-ivc, AUTHOR = {N. Ayache}, JOURNAL = {Image and Vision Computing}, MONTH = {May}, OPTNOTE = {}, NUMBER = {4}, PAGES = {295--313}, TITLE = {Medical Computer Vision, Virtual Reality and Robotics}, VOLUME = {13}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/AyacheIVC1995.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{bertrand-al95, AUTHOR = {G. Bertrand and G. Malandain}, JOURNAL = {Graphical Models and Image Processing}, MONTH = {November}, OPTNOTE = {}, NUMBER = {6}, PAGES = {537--538}, TITLE = {A note on ``Building skeleton models via 3D medial surface-axis thinning algorithms''}, VOLUME = {57}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{delingette_pami_95, AUTHOR = {M. Hébert and H. Delingette and K. Ikeuchi}, JOURNAL = {IEEE Transactions on Pattern Analysis and Machine Intelligence}, MONTH = {June}, OPTNOTE = {}, NUMBER = {7}, OPTPAGES = {}, TITLE = {Shape Representation and Image Segmentation Using Deformable Surfaces}, VOLUME = {17}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {journal, recognition}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/pami.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{monga-benayoun95, AUTHOR = {O. Monga and S. Benayoun}, JOURNAL = {Computer Vision and Image Understanding}, MONTH = {March}, NOTE = {aussi rapport de recherche INRIA numero 1599, Février 1992}, NUMBER = {2}, PAGES = {171-189}, TITLE = {Using partial derivatives of 3D images to extract typical surface features}, VOLUME = {61}, YEAR = {1995}, ABSTRACT = {Three-dimensional edge detection in voxel images is used to locate points corresponding to surfaces of 3D structures. The next stage is to characterize the local geometry of these surfaces in order to extract points or lines which may be used by registration and tracking procedures. Typically one must calculate second-order differential characteristics of the surfaces such as the maximum, mean, and Gaussian curvature. The classical approach is to use local surface fitting, thereby confronting the problem of establishing links between 3D edge detection and local surface approximation. To avoid this problem, we propose to compute the curvatures at locations designated as edge points using directly the partial derivatives of the image. By assuming that the surface is defined locally by a isointensity contour (i.e., the 3D gradient at an edge point corresponds to the normal to the surface), one can calculate directly the curvatures and characterize the local curvature extrema (ridge points) from the first, second, and third derivatives of the gray level function. These partial derivatives can be computed using the operators of the edge detection. In the more general case where the contours are not isocontours (i.e., the gradient at an edge point only approximates the normal to the surface), the only differential invariants of the image are in R^4. This leads us to treat the 3D image as a hypersurface (a three-dimensional manifold) in R^4. We give the relationships between the curvatures of the hypersurface and the curvatures of the surface defined by edge points. The maximum curvature at a point on the hypersurface depends on the second partial derivatives of the 3D image. We note that it may be more efficient to smooth the data in R^4. Moreover, this approach could also be used to detect corners of vertices. We present experimental results obtained using real data (X ray scanner data) and applying these two methods. As an example of the stability, we extract ridge lines in two 3D X ray scanner data of a skull taken in different positions.}, DOI = {doi:10.1006/cviu.1995.1014}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Thirion95c, AUTHOR = {J.-P. Thirion and A Gourdon}, JOURNAL = {Journal of Computer Vision and Image Understanding}, MONTH = {March}, OPTNOTE = {}, NUMBER = {2}, PAGES = {190--202}, TITLE = {Computing the Differential Characteristics of Isointensity Surfaces}, VOLUME = {61}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{ayache_inbook, OPTADDRESS = {}, AUTHOR = {N. Ayache and P. Cinquin and I. Cohen and L. D. Cohen and I. L. Herlin and F. Leitner and O. Monga}, BOOKTITLE = {Computer Integrated Surgery}, OPTCHAPTER = {}, OPTEDITION = {}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {MIT-Press}, OPTSERIES = {}, TITLE = {Segmentation of Complex 3D medical Objects: a challenge and a requirement for computer assisted surgery planning and performing}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00532673/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{bertrand-al94, AUTHOR = {G. Bertrand and G. Malandain}, JOURNAL = {Pattern Recognition Letters}, MONTH = {February}, OPTNOTE = {}, NUMBER = {2}, PAGES = {169--175}, TITLE = {A new characterization of three-dimensional simple points}, VOLUME = {15}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Gueziec&Ayache:IJCV, AUTHOR = {A. Guéziec and N. Ayache}, JOURNAL = {International Journal of Computer Vision}, MONTH = {January}, OPTNOTE = {}, NUMBER = {1}, PAGES = {79--104}, TITLE = {Smoothing and Matching of 3-D Space Curves}, VOLUME = {12}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/GueziecIJCV1994.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{malandain-al95b, AUTHOR = {G. Malandain and S. Fernández-Vidal and J.-M. Rocchisani}, JOURNAL = {Traitement du signal}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {6}, PAGES = {541--558}, TITLE = {Mise en correspondance d'objets 3D par une approche mécanique : application aux images médicales multimodales}, VOLUME = {11}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Thirion94d, AUTHOR = {J.-P. Thirion}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {June}, OPTNOTE = {}, NUMBER = {2}, PAGES = {322--328}, TITLE = {Direct Extraction of Boundaries from Computed Tomography Scans}, VOLUME = {13}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Cohen_CohenPAMI92, AUTHOR = {Laurent D. Cohen and Isaac Cohen}, JOURNAL = {IEEE Transactions on Pattern Analysis and Machine Intelligence}, MONTH = {November}, OPTNOTE = {}, NUMBER = {11}, OPTPAGES = {}, TITLE = {Finite Element Methods for active contour models and balloons from 2-D to 3-D}, VOLUME = {15}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{malandain-al93, AUTHOR = {G. Malandain and G. Bertrand and N. Ayache}, JOURNAL = {International Journal of Computer Vision}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, PAGES = {183--197}, TITLE = {Topological segmentation of discrete surfaces}, VOLUME = {10}, YEAR = {1993}, OPTABSTRACT = {}, DOI = {10.1007/BF01420736}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/malandain-ijcv-1993.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{ayache93a, OPTADDRESS = {}, AUTHOR = {N. Ayache}, BOOKTITLE = {6th Int. Symposium on Robotics Research}, OPTCHAPTER = {}, OPTEDITION = {}, EDITOR = {T. Kanade and R. Paul}, OPTMONTH = {}, NOTE = {Available as INRIA Research Report 2050.}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {MIT-Press}, OPTSERIES = {}, TITLE = {Computer Vision Applied to 3D Medical Images: Results, Trends and Future Challenges}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/Ayache1993.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{NastarSPRINGER, OPTADDRESS = {}, AUTHOR = {Chahab Nastar and Nicholas Ayache}, BOOKTITLE = {Geometric Reasoning - from Perception to Action}, OPTCHAPTER = {}, OPTEDITION = {}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {Lecture notes in computer science}, TITLE = {A New Physically Based Model for Efficient Tracking and Analysis of Deformations}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Cohen_Cohen_Ayache:cvgip92, AUTHOR = {I. Cohen and L.D. Cohen and N. Ayache}, JOURNAL = {Computer Vision, Graphics, and Image Processing: Image Understanding}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, PAGES = {242--263}, TITLE = {Using deformable surfaces to segment 3-D images and infer differential structures}, VOLUME = {56}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/CohenCVGIPIU1992.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{delingette_ivc_92, AUTHOR = {H. Delingette and M. Hébert and K. Ikeuchi}, JOURNAL = {Image and Vision Computing}, MONTH = {April}, OPTNOTE = {}, NUMBER = {3}, PAGES = {132--144}, TITLE = {Shape Representation and Image Segmentation using deformable surfaces}, VOLUME = {10}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {journal, reconstruction}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Gueziec&Ayache:TS, AUTHOR = {A. Guéziec and N. Ayache}, JOURNAL = {Traitement du signal}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {6}, OPTPAGES = {}, TITLE = {Lissage et reconnaissance de courbes gauches bruitées}, VOLUME = {9}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{tsi-herlin-92, AUTHOR = {I.L. Herlin and N. Ayache}, JOURNAL = {Technique et Science Informatiques}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {4}, OPTPAGES = {}, TITLE = {Extraction de traits caractéristiques dans des séquences d'images échocardiographiques}, VOLUME = {11}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{herlin-ayache-ivc92, AUTHOR = {Isabelle L. Herlin and Nicholas Ayache}, JOURNAL = {Image and Vision Computing}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {10}, PAGES = {673--682}, TITLE = {Feature Extraction and analysis methods for sequences of ultrasound images}, VOLUME = {10}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/HerlinIVC1992.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{monga-ayache-sander91, AUTHOR = {O. Monga and N. Ayache and P. Sander}, JOURNAL = {Image and Vision Computing}, MONTH = {Août}, OPTNOTE = {}, NUMBER = {6}, PAGES = {673--682}, TITLE = {Using uncertainty to link edge detection and local surface modelling}, VOLUME = {10}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/MongaIVC1992.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{monga-sander-ayache-ivc92, AUTHOR = {Olivier Monga and Peter Sander and Nicholas Ayache}, JOURNAL = {Image and Vision Computing}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {6}, PAGES = {403--417}, TITLE = {From Voxel to Intrinsic Surface Features}, VOLUME = {10}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/MongaIVC1992b.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Thirion91a, AUTHOR = {J.-Ph. Thirion}, JOURNAL = {Computer Vision, Graphics and Image Processing}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {82--90}, TITLE = {Realistic 3D Simulation of Shapes and Shadows for Image Processing}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{Thirion91b, AUTHOR = {J.-Ph. Thirion}, JOURNAL = {IEEE Transactions on Medical Imaging}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {102--110}, TITLE = {Segmentation of Tomographic Data without Image Reconstruction}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INCOLLECTION{na-isaac-isa, OPTADDRESS = {}, AUTHOR = {N. Ayache and I. Cohen and I.L. Herlin}, BOOKTITLE = {Active Vision, Andrew Blake and Alan Yuille}, CHAPTER = {17}, OPTEDITION = {}, OPTEDITOR = {}, OPTMONTH = {}, NOTE = {In press}, OPTNUMBER = {}, OPTPAGES = {}, PUBLISHER = {MIT Press}, OPTSERIES = {}, TITLE = {Medical Image Tracking}, OPTTYPE = {}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/AyacheInBook1992.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{ayache-lustman-pami91, AUTHOR = {Nicholas Ayache and Francis Lustman}, JOURNAL = {IEEE Transactions on Pattern Analysis and Machine Intelligence}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1}, OPTPAGES = {}, TITLE = {Trinocular Stereovision for Robotics}, VOLUME = {13}, YEAR = {1991}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/AyachePAMI1991.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{monga-al91b, AUTHOR = {O. Monga and R. Deriche and G. Malandain and J.-P. Cocquerez}, JOURNAL = {Image and Vision Computing}, MONTH = {August}, OPTNOTE = {}, NUMBER = {4}, PAGES = {203--214}, TITLE = {Recursive filtering and edge tracking: two primary tools for 3-D edge detection}, VOLUME = {9}, YEAR = {1991}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{rocchisani90, AUTHOR = {J.-M Rocchisani and O. Monga and R. Deriche and G. Malandain}, JOURNAL = {European Journal of Nuclear Medicine}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {419}, TITLE = {Automatic multidimensional segmentation of nuclear medicine images using fast recursive filters}, VOLUME = {16}, YEAR = {1990}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{ayache-faugeras-ijra89, AUTHOR = {Nicholas Ayache and Olivier Faugeras}, JOURNAL = {International Journal of Robotics and Automation}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {6}, PAGES = {804--819}, TITLE = {Maintaining Representations of the Environment of a Mobile Robot}, VOLUME = {5}, YEAR = {1989}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/AyacheIJRA1989.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{ayache-faugeras-ijrr88, AUTHOR = {Nicholas Ayache and Olivier Faugeras}, JOURNAL = {International Journal of Robotics Research}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {6}, PAGES = {45--65}, TITLE = {Building, registrating and fusing noisy visual maps}, VOLUME = {7}, YEAR = {1988}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/AyacheIJRR1988.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{ayache-faverjon-IJCV87, AUTHOR = {Nicholas Ayache and Bernard Faverjon}, JOURNAL = {International Journal of Computer Vision}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {107--131}, TITLE = {Efficient Registration of stereo images by matching graph descriptions of edge segments}, OPTVOLUME = {}, YEAR = {1987}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/AyacheIJCV1987.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @ARTICLE{ayache-pami86, AUTHOR = {Nicholas Ayache and Olivier Faugeras}, JOURNAL = {IEEE Transactions on Pattern Analysis and Machine Intelligence}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {1}, PAGES = {44-54}, TITLE = {HYPER: a new approach for the recognition and positioning of 2D objects}, VOLUME = {8}, YEAR = {1986}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicholas.Ayache/Ayache-Faugeras-Pami86.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {}, X-INTERNATIONAL-AUDIENCE = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{soulier:hal-04362506, ADDRESS = {San Diego, United States}, AUTHOR = {Théodore Soulier and Mariem Hamzaoui and Sales Pitombeira, Milena and De Paula Faria, Daniele and Arya Yazdan-Panah and Matteo Tonietto and Claire Leroy and Michel Bottlaender and Benedetta Bodini and Ninon Burgos and Nicholas Ayache and Olivier Colliot and Bruno Stankoff}, BOOKTITLE = {SPIE Medical Imaging}, OPTEDITOR = {}, MONTH = {February}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = 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{} } @INPROCEEDINGS{dadoun:hal-03984528, ADDRESS = {Cartagena de Indias, Colombia}, AUTHOR = {Hind Dadoun and Hervé Delingette and Anne-Laure Rousseau and de Kerviler, Eric and Nicholas Ayache}, BOOKTITLE = {IEEE ISBI 2023 - International Symposium on Biomedical Imaging}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IEEE}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Joint representation learning from french radiological reports and ultrasound images}, OPTVOLUME = {}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = { multimodal learning deep clustering natural language processing ultrasound examinations kidneys, multimodal learning, deep clustering, natural language processing, ultrasound examinations, kidneys}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03984528/file/HIND_DADOUN_ISBI_2023.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03984528}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{fang:hal-04189905, ADDRESS = {Vancouver, Canada}, AUTHOR = {Zhijie Fang and Hervé Delingette and Nicholas Ayache}, BOOKTITLE = {MICCAI ASMUS 2023 - 4th International Workshop of Advances in Simplifying Medical UltraSound - a workshop held in conjunction with MICCAI 2023, the 26th International Conference on Medical Image Computing and Computer Assisted Intervention}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Anatomical Landmark Detection for Initializing US and MR Image Registration}, OPTVOLUME = {}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Landmark detection, Image-guided intervention, Convolutional neural network and Prostate cancer}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-04189905/file/Fang-ASMUS-camera-ready-version-18Aug2023.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-04189905}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{fraboni:hal-04417106, ADDRESS = {Toronto, Canada}, AUTHOR = {Yann Fraboni and Lucia Innocenti and Michela Antonelli and Richard Vidal and Laetitia Kameni and Sebastien Ourselin and Marco Lorenzi}, BOOKTITLE = {DECAF MICCAI 2023 Workshops}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {Medical Image Computing and Computer Assisted Intervention}, PAGES = {322-333}, PUBLISHER = {Springer Nature Switzerland}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Validation of Federated Unlearning on Collaborative Prostate Segmentation}, VOLUME = {14393}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1007/978-3-031-47401-9_31}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {federated unlearning, prostate cancer, segmentation, Medical imaging}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-04417106/file/DeCaf___Federated_Unlearning_of_Prostate_Segmentation___vf-1.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04417106}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{haxholli:hal-03911870, ADDRESS = {New Orleans, Louisiana, United States}, AUTHOR = {Etrit Haxholli and Marco Lorenzi}, BOOKTITLE = {DLDE-III Workshop in the 37th Conference on Neural Information Processing Systems (NeurIPS 2023)}, OPTEDITOR = {}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Enhanced Distribution Modelling via Augmented Architectures For Neural ODE Flows}, OPTVOLUME = {}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03911870v2/file/Enhanced_distribution_modelling_AFFJORD_HAL.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03911870}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{haxholli:hal-04032669, ADDRESS = {New Orleans, Louisiana, United States}, AUTHOR = {Etrit Haxholli and Marco Lorenzi}, BOOKTITLE = {NeurIPS 2023 Workshop on Diffusion Models}, OPTEDITOR = {}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Faster Training of Diffusion Models and Improved Density Estimation via Parallel Score Matching}, OPTVOLUME = {}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-04032669/file/Improving_Training_Speed_and_Density_Estimation_of_Diffusion_Models_via_Parallel_Score_Matching__HAL_.pdf.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04032669}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{innocenti:hal-04357349, ADDRESS = {Turin (IT), Italy}, AUTHOR = {Lucia Innocenti and Michela Antonelli and Francesco Cremonesi and Kenaan Sarhan and Alejandro Granados and Vicky Goh and Sebastien Ourselin and Marco Lorenzi}, BOOKTITLE = {ECML - PharML - Applications of Machine Learning in Pharma and Healthcare (Workshop at ECML PKDD 2023)}, OPTEDITOR = {}, MONTH = {September}, NOTE = {Workshop at ECML PKDD 2023}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {arXiv}, OPTSERIES = {}, TITLE = {Benchmarking Collaborative Learning Methods Cost-Effectiveness for Prostate Segmentation}, OPTVOLUME = {}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.48550/arXiv.2309.17097}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Collaborative Learning, Cost-Effectiveness, Prostate Segmentation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-04357349/file/ConsensusBenchmarkV2.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04357349}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{maignant:hal-04122754, ADDRESS = {Saint-Malo, (France), France}, AUTHOR = {Elodie Maignant and Alain Trouvé and Xavier Pennec}, BOOKTITLE = {GSI 2023: Geometric Science of Information}, OPTEDITOR = {}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {12-20}, PUBLISHER = {Springer Nature Switzerland}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Riemannian Locally Linear Embedding with Application to Kendall Shape Spaces}, VOLUME = {14071}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1007/978-3-031-38271-0_2}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Locally Linear Embedding, Optimisation on Quotient Manifolds, Shape Spaces}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-04122754/file/Riemannian_Locally_Linear_Embedding_with_Application_to_Kendall_Shape_Spaces.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04122754}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{sreedhar:hal-04209622, ADDRESS = {Vancouver, Canada}, AUTHOR = {Hari Sreedhar and Guillaume P R Lajoinie and Charles Raffaelli and Hervé Delingette}, BOOKTITLE = {DALI 2023 - Data Augmentation, Labelling, and Imperfections / MICCAI Workshop 2023}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, SERIES = {MICCAI Workshop on Data Augmentation, Labelling, and Imperfections, DALI 2023, held in conjunction with MICCAI 2023 Proceedings}, TITLE = {Active Learning Strategies on a Real-World Thyroid Ultrasound Dataset}, OPTVOLUME = {}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Thyroid cancer, Active learning, Ultrasound imaging}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-04209622/file/manuscript.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04209622}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{szwagier:hal-04100534, ADDRESS = {Saint-Malo, (France), France}, AUTHOR = {Tom Szwagier and Xavier Pennec}, BOOKTITLE = {GSI 2023: Geometric Science of Information}, OPTEDITOR = {}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {375-383}, PUBLISHER = {Springer Nature Switzerland}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Rethinking the Riemannian Logarithm on Flag Manifolds as an Orthogonal Alignment Problem}, VOLUME = {14071}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1007/978-3-031-38271-0_37}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Flag manifolds, Riemannian logarithm, Orthogonal alignment, Procrustes analysis, Flag manifolds Riemannian logarithm Orthogonal alignment Procrustes analysis}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-04100534/file/GSI-119.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04100534}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{thanwerdas:hal-04229093, ADDRESS = {Saint Malo, France, France}, AUTHOR = {Yann Thanwerdas and Xavier Pennec}, BOOKTITLE = {GSI 2023 - International Conference on Geometric Science of Information}, OPTEDITOR = {}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {384-391}, PUBLISHER = {Springer Nature Switzerland}, SERIES = {Geometric Science of Information: 6th International Conference, GSI 2023, St. Malo, France, August 30 -- September 1, 2023, Proceedings, Part I}, TITLE = {Characterization of Invariant Inner Products}, VOLUME = {LNCS-14071}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.1007/978-3-031-38271-0_38}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = { Invariant inner product Invariant Riemannian metric Group action Representation theory, Invariant inner product, Invariant Riemannian metric, Group action, Representation theory}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-04229093/file/GSI-105.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04229093}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{yang:hal-04109721, ADDRESS = {Lyon, France}, AUTHOR = {Yingyu Yang and Maxime Sermesant}, BOOKTITLE = {FIMH 2023 - The 12th International Conference on Functional Imaging and Modeling of The Heart}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Unsupervised Polyaffine Transformation Learning for Echocardiography Motion Estimation}, OPTVOLUME = {}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = { Motion Estimation Echocardiography Polyaffine Transformation, Motion Estimation, Echocardiography, Polyaffine Transformation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-04109721/file/Unsupervised_Polyaffine_Motion_Model_for_Echocardiography_Analysis__final_-2.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04109721}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{fraboni:hal-03500307, ADDRESS = {Vienna, Austria}, AUTHOR = {Yann Fraboni and Richard Vidal and Laetitia Kameni and Marco Lorenzi}, BOOKTITLE = {International Workshop on Trustworthy Federated Learning in Conjunction with IJCAI 2022 (FL-IJCAI'22)}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A General Theory for Client Sampling in Federated Learning}, OPTVOLUME = {}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03500307v2/file/A_General_Theory_for_Client_Sampling_in_Federated_Learning.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03500307}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{hamzaoui:hal-03775967, ADDRESS = {Singapore, Singapore}, AUTHOR = {Dimitri Hamzaoui and Sarah Montagne and Raphaele Renard-Penna and Nicholas Ayache and Hervé Delingette}, BOOKTITLE = {MICCAI Workshop UNSURE 2022: Uncertainty for Safe Utilization of Machine Learning in Medical Imaging}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {MOrphologically-aware Jaccard-based ITerative Optimization (MOJITO) for Consensus Segmentation}, OPTVOLUME = {}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Consensus Algorithm, Segmentation 2D et 3D, Jaccard distance, STAPLE}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03775967/file/JaccardConsensus__Anonymized_%285%29.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03775967}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{kashtanova:hal-03687596, ADDRESS = {Zurich, Switzerland}, AUTHOR = {Victoriya Kashtanova and Ibrahim Ayed and Andony Arrieula and Mark Potse and Patrick Gallinari and Maxime Sermesant}, BOOKTITLE = {MIDL 2022 - Medical Imaging with Deep Learning}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Deep Learning for Model Correction in Cardiac Electrophysiological Imaging}, OPTVOLUME = {}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Electrophysiology, Deep learning, Simulations, Physics-based learning}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03687596/file/Kashtanova_MIDL22_Camera_Ready.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03687596}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{kashtanova:hal-03894974, ADDRESS = {Singapore, Singapore}, AUTHOR = {Victoriya Kashtanova and Mihaela Pop and Ibrahim Ayed and Patrick Gallinari and Maxime Sermesant}, BOOKTITLE = {STACOM 2022 - 13th Workhop on Statistical Atlases and Computational Modelling of the Heart}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {APHYN-EP: Physics-based deep learning framework to learn and forecast cardiac electrophysiology dynamics}, OPTVOLUME = {}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = { Physics-based learning Deep Learning Electrophysiology Simulations, Physics-based learning, Deep Learning, Electrophysiology, Simulations}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03894974/file/STACOM2022_Workshop-ready.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03894974}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{li:hal-03775940, ADDRESS = {Singapore, Singapore}, AUTHOR = {Huiyu Li and Nicholas Ayache and Hervé Delingette}, BOOKTITLE = {DeCaF 2022 - International Workshop on Distributed, Collaborative, and Federated Learning}, EDITOR = {Springer Nature}, MONTH = {September}, NOTE = {Best Paper Award}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, SERIES = {Distributed, Collaborative, and Federated Learning, and Affordable AI and Healthcare for Resource Diverse Global Health Third MICCAI Workshop, DeCaF 2022, and Second MICCAI Workshop, FAIR 2022, Held in Conjunction with MICCAI 2022, Singapore, September 18 and 22, 2022, Proceedings}, TITLE = {Data Stealing Attack on Medical Images: Is it Safe to Export Networks from Data Lakes?}, VOLUME = {LNCS - 13573}, YEAR = {2022}, OPTABSTRACT = {}, DOI = {10.1007/978-3-031-18523-6_3}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Data Stealing Attack, Privacy, Medical Images}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03775940/file/Paper.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03775940}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{ly:hal-03829609, ADDRESS = {Singapore, Singapore}, AUTHOR = {Buntheng Ly and Sonny Finsterbach and Marta Nuñez-Garcia and Pierre Jaïs and Damien Garreau and Hubert Cochet and Maxime Sermesant}, BOOKTITLE = {STACOM 2022 - 13th Workhop on Statistical Atlases and Computational Modelling of the Heart}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Interpretable Prediction of Post-Infarct Ventricular Arrhythmia using Graph Convolutional Network}, OPTVOLUME = {}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Graph Neural Network, Ventricular Arrhythmia, Interpretable AI, Cardiac CT}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03829609/file/STACOM2022_Graph_Learning_Paper_camready.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03829609}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{taiello:hal-03697446, ADDRESS = {Singapore, Singapore}, AUTHOR = {Riccardo Taiello and Melek Önen and Olivier Humbert and Marco Lorenzi}, BOOKTITLE = {MICCAI 2022 - Medical Image Computing and Computer Assisted Intervention}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Privacy Preserving Image Registration}, OPTVOLUME = {}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Image Registration, Privacy enhancing technologies, Trustworthiness}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03697446v3/file/Privacy_Preserving_Image_Registration.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03697446}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{terrail:hal-03900026, ADDRESS = {New Orleans, United States}, AUTHOR = {Jean Ogier Du Terrail and Samy-Safwan Ayed and Edwige Cyffers and Felix Grimberg and Chaoyang He and Regis Loeb and Paul Mangold and Tanguy Marchand and Othmane Marfoq and Erum Mushtaq and Boris Muzellec and Constantin Philippenko and Santiago Silva and Maria Telenczuk and Shadi Albarqouni and Salman Avestimehr and Aurélien Bellet and Aymeric Dieuleveut and Martin Jaggi and Sai Praneeth Karimireddy and Marco Lorenzi and Giovanni Neglia and Marc Tommasi and Mathieu Andreux}, BOOKTITLE = {NeurIPS 2022 - Thirty-sixth Conference on Neural Information Processing Systems}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, SERIES = {Proceedings of NeurIPS}, TITLE = {FLamby: Datasets and Benchmarks for Cross-Silo Federated Learning in Realistic Healthcare Settings}, OPTVOLUME = {}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03900026}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{wang:hal-03792276, ADDRESS = {Singapore, Singapore}, AUTHOR = {Zihao Wang and Yingyu Yang and Maxime Sermesant and Hervé Delingette}, BOOKTITLE = {STACOM 2022 - 13th workshop on Statistical Atlases and Computational Models of the Heart}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Unsupervised Echocardiography Registration through Patch-based MLPs and Transformers}, OPTVOLUME = {}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Unsupervised Registration, MLP, Transformer, Echocardiography}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03792276/file/REG_STACOM2022.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03792276}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{yang:hal-03888791, ADDRESS = {Singapore, Singapore}, AUTHOR = {Yingyu Yang and Marie Rocher and Pamela Moceri and Maxime Sermesant}, BOOKTITLE = {STACOM 2022 - 13th workshop on Statistical Atlases and Computational Models of the Heart}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Explainable Electrocardiogram Analysis with Wave Decomposition: Application to Myocardial Infarction Detection}, OPTVOLUME = {}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {ECG analysis, Reconstruction, Explainable ML, Myocardial infarction classification}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03888791/file/ECG_STACOM2022.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03888791}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{audelan:hal-03538729, ADDRESS = {Virtual, United Kingdom}, AUTHOR = {Benoît Audelan and Lopez Stéphanie and Pierre Fillard and Yann Diascorn and Bernard Padovani and Hervé Delingette}, BOOKTITLE = {ERS 2021 - European Respiratory Society International Congress}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Validation of lung nodule detection a year before diagnosis in NLST dataset based on a deep learning system}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1183/13993003.congress-2021.OA4317}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03538729}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{balelli:hal-03152886, ADDRESS = {Bornholm, Denmark}, AUTHOR = {Irene Balelli and Santiago Silva and Marco Lorenzi}, BOOKTITLE = {International Conference on Information Processing in Medical Imaging}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, SERIES = {Information processing in medical imaging: proceedings of the 27th International Conference, IPMI 2021}, TITLE = {A Probabilistic Framework for Modeling the Variability Across Federated Datasets of Heterogeneous Multi-View Observations}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Federated Learning, Hierarchical Generative Model, Heterogeneity}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03152886v2/file/Balelli_IPMI2021_CameraReady.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03152886}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{burgosfernandez:hal-03513023, ADDRESS = {Online, Spain}, AUTHOR = {Francisco J Burgos-Fernández and Buntheng Ly and Fernando Dìaz-Doutón and Meritxell Vilaseca and Jaume Pujol and Maxime Sermesant}, BOOKTITLE = {Libro de Resúmenes RNO2021}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Automatic classification of multispectral eye fundus images using deep learning}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03513023/file/RNO2021_FranciscoJBurgos.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03513023}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{dadoun:hal-03127809, ADDRESS = {Nice, France}, AUTHOR = {Hind Dadoun and Hervé Delingette and Anne-Laure Rousseau and de Kerviler, Eric and Nicholas Ayache}, BOOKTITLE = {ISBI 2021 - 18th IEEE International Symposium on Biomedical Imaging}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Combining Bayesian and Deep Learning Methods for the Delineation of the Fan in Ultrasound Images}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1109/ISBI48211.2021.9434112}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Ultrasound imaging, Deep Learning, Ultrasound fan area detection, pre-processing}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03127809/file/root.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03127809}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{desrues:hal-03369345, ADDRESS = {Stanford, CA, United States}, AUTHOR = {Gaëtan Desrues and Delphine Feuerstein and Thierry Legay and Serge Cazeau and Maxime Sermesant}, BOOKTITLE = {FIMH 2021 - 11th International Conference on Functional Imaging and Modeling of the Heart}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Personal-by-design: a 3D Electromechanical Model of the Heart Tailored for Personalisation}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-78710-3_43}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Personalisation, Digital twin, Cardiac electromechanical model, Electrophysiology, Electrocardiogram}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03369345/file/fimh_2021.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03369345}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{difolco:hal-03203378, ADDRESS = {Stanford, United States}, AUTHOR = {Di Folco, Maxime and Nicolas Guigui and Patrick Clarysse and Pamela Moceri and Nicolas Duchateau}, BOOKTITLE = {FIMH 2021 - 11th International Conference on Functional Imaging and Modeling of the Heart}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {223--231}, PUBLISHER = {Springer}, SERIES = {Lectune notes in computer science (LNCS)}, TITLE = {Investigation of the impact of normalization on the study of interactions between myocardial shape and deformation}, VOLUME = {12738}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-78710-3_22}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac imaging, manifold learning, myocardial strain, heart shape}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03203378/file/Difolco_FIMH_2021.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03203378}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{fraboni:hal-03232421, ADDRESS = {online, United States}, AUTHOR = {Yann Fraboni and Richard Vidal and Laetitia Kameni and Marco Lorenzi}, BOOKTITLE = {ICML 2021 - 38th International Conference on Machine Learning}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Clustered Sampling: Low-Variance and Improved Representativity for Clients Selection in Federated Learning}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Client sampling, federated learning, sampling variance, data representativity}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03232421/file/ICML_clustered_sampling.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03232421}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{fraboni:hal-03123638, ADDRESS = {San Diego, United States}, AUTHOR = {Yann Fraboni and Richard Vidal and Marco Lorenzi}, BOOKTITLE = {AISTATS 2021 - 24th International Conference on Artificial Intelligence and Statistics}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Free-rider Attacks on Model Aggregation in Federated Learning}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03123638/file/free_riding_AISTATS_vf.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03123638}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{guigui:hal-03160677, ADDRESS = {Paris, France}, AUTHOR = {Nicolas Guigui and Elodie Maignant and Alain Trouvé and Xavier Pennec}, BOOKTITLE = {GSI 2021 - 5th conference on Geometric Science of Information}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {103-110}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Parallel Transport on Kendall Shape Spaces}, VOLUME = {12829}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-80209-7_12}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03160677/file/parallel_transport_shape.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03160677}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{guigui:hal-03142196, ADDRESS = {Nice, France}, AUTHOR = {Nicolas Guigui and Pamela Moceri and Maxime Sermesant and Xavier Pennec}, BOOKTITLE = {ISBI 2021 - 18th IEEE International Symposium on Biomedical Imaging}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {pp. 1394-1397}, PUBLISHER = {IEEE}, SERIES = {IEEE 18th International Symposium on Biomedical Imaging (ISBI), 2021}, TITLE = {Cardiac Motion Modeling with Parallel Transport and Shape Splines}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1109/ISBI48211.2021.9433887}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {LDDMM, Cardiac Modelling, Shape Analysis}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03142196/file/root.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03142196}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{guigui:hal-03154318, ADDRESS = {Paris, France}, AUTHOR = {Nicolas Guigui and Xavier Pennec}, BOOKTITLE = {GSI 2021 - 5th conference on Geometric Science of Information}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {119-126}, PUBLISHER = {Springer, Cham}, SERIES = {Lecture Notes in Computer Science}, TITLE = {A reduced parallel transport equation on Lie Groups with a left-invariant metric}, VOLUME = {12829}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-80209-7_14}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03154318v2/file/parallel_transport_lie_group.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03154318}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{hamzaoui:hal-03826791, ADDRESS = {Strasbourg, France}, AUTHOR = {Mariem Hamzaoui and Théodore Soulier and Arya Yazdan-Panah and Schmidt- Mengin, Marius and Olivier Colliot and Nicholas Ayache and Bruno Stankoff}, BOOKTITLE = {MICCAI 2021 MSSEG2 - 24th International Conference on Medical Image Computing and Computer Assisted Intervention - Challenge on multiple sclerosis new lesions segmentation challenge using a data management and processing infrastructure - MICCAI-MSSEG-2}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Intensity based Regions Of Interest (ROIs) preselection followed by Convolutional Neuronal Network (CNN) based segmentation for new lesions detection in Multiple Sclerosis}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Classical image processing, CNNs, Hybrid approach}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03826791/file/maryem_MSSEG2.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03826791}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{harrison:hal-03375871, ADDRESS = {Strasbourg, France}, AUTHOR = {Josquin Harrison and Marco Lorenzi and Benoit Legghe and Xavier Iriart and Hubert Cochet and Maxime Sermesant}, BOOKTITLE = {MICCAI 2021 - 24th International Conference on Medical Image Computing and Computer Assisted Intervention}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, SERIES = {LNCS - Lecture Notes in Computer Science}, TITLE = {Phase-independent Latent Representation for Cardiac Shape Analysis}, VOLUME = {12906}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-87231-1_52}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Shape Analysis, Atrial Fibrillation, Thrombosis, Graph Representation, Latent Space Model, Multi-Task Learning, Meta-Learning}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03375871/file/paper1929.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03375871}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{jousse:hal-03500440, ADDRESS = {JODHPUR, India}, AUTHOR = {Florent Jousse and Xavier Pennec and Hervé Delingette and Matilde Gonzalez}, BOOKTITLE = {FG 2021 - IEEE International Conference on Automatic Face and Gesture Recognition}, OPTEDITOR = {}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Geodesic squared exponential kernel for non-rigid shape registration}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1109/FG52635.2021.9666997}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03500440/file/sample_FG2021.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03500440}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{kashtanova:hal-03369201, ADDRESS = {Stanford, CA (virtual), United States}, AUTHOR = {Victoriya Kashtanova and Ibrahim Ayed and Nicolas Cedilnik and Patrick Gallinari and Maxime Sermesant}, BOOKTITLE = {FIMH 2021 - 11th International Conference on Functional Imaging and Modeling of the Heart}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {482-492}, PUBLISHER = {Springer International Publishing}, SERIES = {Lecture Notes in Computer Science}, TITLE = {EP-Net 2.0: Out-of-Domain Generalisation for Deep Learning Models of Cardiac Electrophysiology}, VOLUME = {12738}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-78710-3_46}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Electrophysiology, Deep learning, Simulation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03369201/file/FIMH_2021_final.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03369201}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{ly:hal-03378951, ADDRESS = {Stanford, United States}, AUTHOR = {Buntheng Ly and Sonny Finsterbach and Marta Nuñez-Garcia and Hubert Cochet and Maxime Sermesant}, BOOKTITLE = {FIMH 2021 - 11th International Conference on Functional Imaging and Modeling of the Heart}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {461-470}, PUBLISHER = {Springer International Publishing}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Scar-Related Ventricular Arrhythmia Prediction from Imaging Using Explainable Deep Learning}, VOLUME = {12738}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-78710-3_44}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Conditional-VAE, Sustained Ventricular Arrhythmia, CTcardiac imaging, Myocardium thickness, Image Classification}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03378951/file/scar_related_va_pred__fimh2021_buntheng%20%281%29.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03378951}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{schmidtmengin:hal-03826787, ADDRESS = {Strasbourg, France}, AUTHOR = {Marius Schmidt-Mengin and Arya Yazdan-Panah and Théodore Soulier and Mariem Hamzaoui and Nicholas Ayache and Olivier Colliot}, BOOKTITLE = {MICCAI-MSSEG-2 - 25th International Conference on Medical Image Computing and Computer Assisted Intervention - challenge on multiple sclerosis new lesions segmentation challenge using a data management and processing infrastructure}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Segmentation of new multiple sclerosis lesions on FLAIR MRI using online hard example mining}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Segmentation, Deep learning, Hard example mining, Multiple Sclerosis, MRI}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03826787/file/marius_MSSEG2.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03826787}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{thanwerdas:hal-03157992, ADDRESS = {Paris, France}, AUTHOR = {Yann Thanwerdas and Xavier Pennec}, BOOKTITLE = {GSI 2021 - 5th conference on Geometric Science of Information}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {93-102}, PUBLISHER = {Springer, Cham}, SERIES = {Proceedings of Geometric Science of Information}, TITLE = {Geodesics and Curvature of the Quotient-Affine Metrics on Full-Rank Correlation Matrices}, VOLUME = {12829}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-80209-7_11}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Correlation matrices, SPD matrices, Quotient manifold, Quotient-affine metric, Riemannian geometry}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03157992v3/file/main.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03157992}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{tourniaire:hal-03342963, ADDRESS = {Strasbourg, France}, AUTHOR = {Paul Tourniaire and Marius Ilie and Paul Hofman and Nicholas Ayache and Hervé Delingette}, BOOKTITLE = {MICCAI 2021 - Workshop on Computational Pathology}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {216-226}, PUBLISHER = {PMLR}, SERIES = {Proceedings of Machine Learning Research}, TITLE = {Attention-based Multiple Instance Learning with Mixed Supervision on the Camelyon16 Dataset}, VOLUME = {156}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Attention Mechanism, Mixed Supervision, Histopathology}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03342963/file/Compay_hal.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03342963}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{wang:hal-03024759, ADDRESS = {strasbourg, France}, AUTHOR = {Zihao Wang and Clair Vandersteen and Charles Raffaelli and Nicolas Guevara and François Patou and Hervé Delingette}, BOOKTITLE = {MICCAI 2021 - Workshop on Data Augmentation, Labeling, and Imperfections}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {163-172}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science (LNCS)}, TITLE = {One-shot Learning Landmarks Detection}, VOLUME = {13003}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-88210-5_15}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03024759v2/file/Camera_Ready__MICCAI2021_Workshop_Landmarks_Detection.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03024759}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{yang:hal-03371358, ADDRESS = {Stanford, United States}, AUTHOR = {Yingyu Yang and Maxime Sermesant}, BOOKTITLE = {FIMH 2021 - 11th International Conference on Functional Imaging and Modeling of the Heart}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Shape Constraints in Deep Learning for Robust 2D Echocardiography Analysis}, OPTVOLUME = {}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-78710-3_3}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Segmentation, Deep Learning, Deformation, Echocardiography}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03371358/file/FIMH_2021_YingyuYANG.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03371358}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{audelan:hal-02934590, ADDRESS = {Lima/ Virtuel, Peru}, AUTHOR = {Benoît Audelan and Dimitri Hamzaoui and Sarah Montagne and Raphaële Renard-Penna and Hervé Delingette}, BOOKTITLE = {MICCAI 2020 - 23rd International Conference on Medical Image Computing and Computer Assisted Intervention}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Robust Fusion of Probability Maps}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02934590/file/paper2268.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02934590}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{banus:hal-02952576, ADDRESS = {Lima / Virtual, Peru}, AUTHOR = {Jaume Banus and Maxime Sermesant and Oscar Camara and Marco Lorenzi}, BOOKTITLE = {MICCAI 2020 - 23th International Conference on Medical Image Computing and Computer Assisted Intervention}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {478-486}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Joint data imputation and mechanistic modelling for simulating heart-brain interactions in incomplete datasets}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-59725-2_46}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Gaussian Process, Variational Inference, Lumped model, Missing features, Biomechanical simulation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02952576v2/file/MICCAI_2020_Jaume%2823%29.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02952576}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{chevallier:hal-03154401, ADDRESS = {Les Houches, France}, AUTHOR = {Emmanuel Chevallier and Nicolas Guigui}, BOOKTITLE = {Joint Structures and Common Foundations of Statistical Physics, Information Geometry and Inference for Learning}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Wrapped statistical models on manifolds: motivations, the case SE(n), and generalization to symmetric spaces}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Non-Euclidean statistics, wrapped distributions, exponential map, moment matching estimator}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03154401/file/WrappedModelsOnManifoldsChevallierGuigui.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03154401}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{hamzaoui:hal-03126932, ADDRESS = {Paris, France}, AUTHOR = {Dimitri Hamzaoui and Sarah Montagne and Pierre Mozer and Raphaële Renard-Penna and Hervé Delingette}, BOOKTITLE = {Congrès Francais d'Urologie}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {696-697}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Segmentation automatique de la prostate à l'aide d'un réseau de neurones profond}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, DOI = {10.1016/j.purol.2020.07.010}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03126932}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{miolane:hal-02908006, ADDRESS = {Austin, Texas, United States}, AUTHOR = {Nina Miolane and Nicolas Guigui and Hadi Zaatiti and Christian Shewmake and Hatem Hajri and Daniel Brooks and Le Brigant, Alice and Johan Mathe and Benjamin Hou and Yann Thanwerdas and Stefan Heyder and Olivier Peltre and Niklas Koep and Yann Cabanes and Thomas Gerald and Paul Chauchat and Bernhard Kainz and Claire Donnat and Susan Holmes and Xavier Pennec}, BOOKTITLE = {SciPy 2020 - 19th Python in Science Conference}, EDITOR = {Meghann Agarwal and Chris Calloway and Dillon Niederhut and David Shupe}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {48-57}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Introduction to Geometric Learning in Python with Geomstats}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, DOI = {10.25080/Majora-342d178e-007}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Index Terms-differential geometry, statistics, manifold, machine learning}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02908006/file/geomstats.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02908006}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{moceri:hal-02445303, ADDRESS = {Paris, France}, AUTHOR = {Pamela Moceri and Nicolas Duchateau and N Dursent and Xavier Iriart and Sébastien Hascoet and D Baudouy and Emile Ferrari and Maxime Sermesant}, BOOKTITLE = {JESFC 2020 - 30es Journées Européennes de la Société Française de Cardiologie}, OPTEDITOR = {}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {163-4}, OPTPUBLISHER = {}, SERIES = {Archives of Cardiovascular Diseases Supplements}, TITLE = {Right ventricular remodelling in CHD-PAH patients using 3D speckle tracking}, VOLUME = {12}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02445303}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{nunezgarcia:hal-02961506, ADDRESS = {Lima, Peru}, AUTHOR = {Marta Nuñez-Garcia and Nicolas Cedilnik and Shuman Jia and Hubert Cochet and Marco Lorenzi and Maxime Sermesant}, BOOKTITLE = {STACOM 2020 - 11th International Workshop on Statistical Atlases and Computational Models of the Heart}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {p.108--116}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Estimation of imaging biomarker's progression in post-infarct patients using cross-sectional data}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Post-infarct cardiac remodeling, Ventricular arrhythmia, Cross-sectional data, Disease progression modeling}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02961506v2/file/scar_maturation_stacom2020_cr.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02961506}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{nunezgarcia:hal-02961500, ADDRESS = {Lima, Peru}, AUTHOR = {Marta Nuñez-Garcia and Nicolas Cedilnik and Shuman Jia and Maxime Sermesant and Hubert Cochet}, BOOKTITLE = {STACOM 2020 - 11th International Workshop on Statistical Atlases and Computational Models of the Heart}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {p.108--116}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Automatic multiplanar CT reformatting from trans-axial into left ventricle short-axis view}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Automatic image reformatting, Short-axis view, Deep learning segmentation, Cardiac imaging}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02961500/file/SAX_reformat_Stacom2020_cr.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02961500}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{orlhac:inserm-02952453, ADDRESS = {Virtual Meeting, United States}, AUTHOR = {Fanny Orlhac and Thibaut Cassou-Mounat and Jean-Yves Pierga and Marie Luporsi and Christophe Nioche and Charles Bouveyron and Nicholas Ayache and Nina Jehanno and Alain Livartowski and Irene Buvat}, BOOKTITLE = {SNMMI Annual Meeting}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Can we identify ''twin patients'' to predict response to neoadjuvant chemotherapy in breast cancer?}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inserm.hal.science/inserm-02952453/file/Abstract_twin_HAL.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inserm.hal.science/inserm-02952453}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{orlhac:inserm-02952445, ADDRESS = {Virtual Meeting, Austria}, AUTHOR = {Fanny Orlhac and Anne-Capucine Rollet and Irène Buvat and Jacques Darcourt and Véronique Bourg and Christophe Nioche and Charles Bouveyron and Nicholas Ayache and Olivier Humbert}, BOOKTITLE = {EANM Annual Meeting - Annual Meeting of the European Association of Nuclear Medicine}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Identifying a reliable radiomic signature from scarce data: illustration for 18F-FDOPA PET images in glioblastoma patients}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inserm.hal.science/inserm-02952445/file/Absrract_Gliomes_HAL.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inserm.hal.science/inserm-02952445}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{silva:hal-02966789, ADDRESS = {Lima/ Virtuel, Peru}, AUTHOR = {Santiago Silva and Andre Altmann and Boris Gutman and Marco Lorenzi}, BOOKTITLE = {MICCAI 2020 - 23rd International Conference on Medical Image Computing and Computer Assisted Intervention - 1st Workshop on Distributed and Collaborative Learning}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {201-210}, PUBLISHER = {Springer}, SERIES = {DCL: MICCAI Workshop on Distributed and Collaborative Learning}, TITLE = {Fed-BioMed: A general open-source frontendframework for federated learning in healthcare}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {federated learning, healthcare, medical imaging}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-02966789/file/DCL_MICCAI_2020_Paper-1%281%29.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02966789}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{wang:hal-02570026, ADDRESS = {Montréal, Canada}, AUTHOR = {Zihao Wang and Clair Vandersteen and Thomas Demarcy and Dan Gnansia and Charles Raffaelli and Nicolas Guevara and Hervé Delingette}, BOOKTITLE = {MIDL 2020 - Medical Imaging with Deep Learning}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A Deep Learning based Fast Signed Distance Map Generation}, OPTVOLUME = {}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02570026/file/MIDL2020__A_Deep_Learning_based_Fast_Signed_Distance_MapGeneration%20%281%29.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02570026}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{antelmi:hal-02154181, ADDRESS = {Long Beach, United States}, AUTHOR = {Luigi Antelmi and Nicholas Ayache and Philippe Robert and Marco Lorenzi}, BOOKTITLE = {ICML 2019 - 36th International Conference on Machine Learning}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Sparse Multi-Channel Variational Autoencoder for the Joint Analysis of Heterogeneous Data}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02154181/file/antelmi19a.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02154181}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{audelan:hal-02265131, ADDRESS = {Shenzhen, China}, AUTHOR = {Benoît Audelan and Hervé Delingette}, BOOKTITLE = {MICCAI 2019 - 22nd International Conference on Medical Image Computing and Computer Assisted Intervention}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Unsupervised Quality Control of Image Segmentation based on Bayesian Learning}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Image segmentation, Bayesian learning, Quality control}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02265131/file/paper2106.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02265131}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{ayache:hal-02063234, ADDRESS = {Fukuoka, Japan}, AUTHOR = {Nicholas Ayache}, BOOKTITLE = {5th International Symposium on Multidiscplinary Computational Anatomy}, OPTEDITOR = {}, MONTH = {March}, NOTE = {Talk given by M. Nicholas Ayache at the MCA 2019}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {AI and Healthcare: towards a Digital Twin?}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02063234/file/Ayache_invited_talk_MCA_FY2019.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02063234}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{ayed:hal-02106618, ADDRESS = {Bordeaux, France}, AUTHOR = {Ibrahim Ayed and Nicolas Cedilnik and Patrick Gallinari and Maxime Sermesant}, BOOKTITLE = {FIMH 2019 - 10th International Conference on Functional Imaging of the Hearth}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {55-63}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {EP-Net: Learning Cardiac Electrophysiology Models for Physiology-based Constraints in Data-Driven Predictions}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02106618/file/LearningModel_FIMH_2019%285%29.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02106618}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{bacoyannis:hal-02108958, ADDRESS = {Bordeaux, France}, AUTHOR = {Tania Bacoyannis and Julian Krebs and Nicolas Cedilnik and Hubert Cochet and Maxime Sermesant}, BOOKTITLE = {FIMH 2019 - 10th International Conference on Functional Imaging and Modeling of the Heart}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {20-28}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {Deep Learning Formulation of ECGI for Data-driven Integration of Spatiotemporal Correlations and Imaging Information}, VOLUME = {LNCS 11504}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {ECGI, Deep learning, Generative Model, Simulation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02108958v2/file/tania_fimh.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02108958}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{banus:hal-02361466, ADDRESS = {Bordeaux, France}, AUTHOR = {Jaume Banus and Marco Lorenzi and Oscar Camara and Maxime Sermesant}, BOOKTITLE = {FIMH 2019 - 10th International Conference on Functional Imaging and Modeling of the Heart}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {285-293}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Large Scale Cardiovascular Model Personalisation for Mechanistic Analysis of Heart and Brain Interactions}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-21949-9_31}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02361466/file/FIMH_Jaume_2019_Updated.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02361466}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{cedilnik:hal-02106609, ADDRESS = {Bordeaux, France}, AUTHOR = {Nicolas Cedilnik and Josselin Duchateau and Frederic Sacher and Pierre Jaïs and Hubert Cochet and Maxime Sermesant}, BOOKTITLE = {FIMH 2019 - 10th International Conference on Functional Imaging and Modeling of the Heart}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {325-333}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Fully Automated Electrophysiological Model Personalisation Framework from CT Imaging}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Model Personalisation, Segmentation, Deep learning, Imaging}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02106609/file/cedilnik_fimh2019%287%29.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02106609}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{cedilnik:hal-02181793, ADDRESS = {Lisbonne, Portugal}, AUTHOR = {Nicolas Cedilnik and Shuman Jia and Pierre Jaïs and Hubert Cochet and Maxime Sermesant}, BOOKTITLE = {EHRA 2019 - European Heart Rhythm Association}, OPTEDITOR = {}, MONTH = {March}, OPTNOTE = {}, NUMBER = {2}, OPTORGANIZATION = {}, PAGES = {720-739}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Automatic non-invasive substrate analysis from CT images in post-infarction VT}, VOLUME = {21}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1093/europace/euz105}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02181793}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{cedilnik:hal-02368288, ADDRESS = {Shenzen, China}, AUTHOR = {Nicolas Cedilnik and Maxime Sermesant}, BOOKTITLE = {STACOM 2019 - 10th Workshop on Statistical Atlases and Computational Modelling of the Heart}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Eikonal Model Personalisation using Invasive Data to Predict Cardiac Resynchronisation Therapy Electrophysiological Response}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Electrophysiology, Computer model, Personalisation, Cardiac resynchronisation therapy}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02368288/file/cedilnik_stacom2019.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02368288}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{desrues:hal-02429678, ADDRESS = {Shenzhen, China}, AUTHOR = {Gaëtan Desrues and Hervé Delingette and Maxime Sermesant}, BOOKTITLE = {STACOM 2019: Statistical Atlases and Computational Models of the Heart}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Towards Hyper-Reduction of Cardiac Models using Poly-Affine Deformation}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02429678/file/STACOM_FinalVersion.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02429678}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{garbarino:hal-02165021, ADDRESS = {Hong Kong, Hong Kong SAR China}, AUTHOR = {Sara Garbarino and Marco Lorenzi}, BOOKTITLE = {IPMI 2019 - International Conference on Information Processing in Medical Imaging}, OPTEDITOR = {}, MONTH = {June}, NOTE = {Bayesian non--parametric model, protein propagation, Alzheimer'sdisease, Gaussian process, dynamical systems, spatio--temporal model, disease progression modeling}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {57-69}, PUBLISHER = {springer}, SERIES = {Lecture Notes in Computer Science book series}, TITLE = {Modeling and inference of spatio-temporal protein dynamics across brain networks}, VOLUME = {11492}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02165021/file/IPMI_01-10-2018.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02165021}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{guigui:hal-02148832, ADDRESS = {Toulouse, France}, AUTHOR = {Nicolas Guigui and Shuman Jia and Maxime Sermesant and Xavier Pennec}, BOOKTITLE = {GSI 2019 - 4th conference on Geometric Science of Information}, OPTEDITOR = {}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {F. Nielsen and F. Barbaresco}, PAGES = {759--768}, PUBLISHER = {Springer}, SERIES = {Proceedings of Geometric Science of Information}, TITLE = {Symmetric Algorithmic Components for Shape Analysis with Diffeomorphisms}, VOLUME = {Lecture Notes in Computer Science 11712}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-26980-7_79}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Symmetric Spaces, Parallel Transport, Shape Registration}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02148832/file/55-Guigui.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02148832}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{krebs:hal-02239318, ADDRESS = {Shenzhen, China}, AUTHOR = {Julian Krebs and Tommaso Mansi and Nicholas Ayache and Hervé Delingette}, BOOKTITLE = {STACOM 2019 - 10th Workshop on Statistical Atlases and Computational Modelling of the Heart}, OPTEDITOR = {}, MONTH = {October}, NOTE = {Probabilistic Motion Model, Motion Tracking, Temporal Super-Resolution, Diffeomorphic Registration, Temporal Variational Autoencoder}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Probabilistic Motion Modeling from Medical Image Sequences: Application to Cardiac Cine-MRI}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02239318v2/file/stacom_2019_final.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02239318}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{lazaridis:hal-03374557, ADDRESS = {Shenzhen, China}, AUTHOR = {Georgios Lazaridis and Marco Lorenzi and Sebastien Ourselin and David Garway-Heath}, BOOKTITLE = {MICAI 2019 - 22nd International Conference on Medical Image Computing and Computer-Assisted Intervention}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {3-11}, PUBLISHER = {Springer International Publishing}, SERIES = {Medical Image Computing and Computer Assisted Intervention -- MICCAI 2019}, TITLE = {Enhancing OCT Signal by Fusion of GANs: Improving Statistical Power of Glaucoma Clinical Trials}, VOLUME = {LNCS. LNIP - 11764}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-32239-7_1}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03374557}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{legay:hal-03687459, ADDRESS = {Shenzhen, China}, AUTHOR = {Alexandre Legay and Thomas Tiennot and Jean-François Gelly and Maxime Sermesant and Jean Bulté}, BOOKTITLE = {STACOM 2019 - 10th International Workshop on Statistical Atlases and Computational Models of the Heart: Atrial Segmentation and LV Quantification Challenges}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {167-175}, PUBLISHER = {Springer International Publishing}, SERIES = {Statistical Atlases and Computational Models of the Heart. Multi-Sequence CMR Segmentation, CRT-EPiggy and LV Full Quantification Challenges}, TITLE = {End-to-end Cardiac Ultrasound Simulation for a Better Understanding of Image Quality}, VOLUME = {LNCS. LNIP - 12009}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-39074-7_18}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Ultrasound, Cardiac Modelling, Probe Design, Image Quality}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03687459/file/Article_STACOM_authors_version.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03687459}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{ly:hal-02401643, ADDRESS = {Shenzhen, China}, AUTHOR = {Buntheng Ly and Hubert Cochet and Maxime Sermesant}, BOOKTITLE = {STACOM 2019 - 10th Workhop on Statistical Atlases and Computational Modelling of the Heart}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Style Data Augmentation for Robust Segmentation of Multi-Modality Cardiac MRI}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Deep Learning, Image segmentation, Cardiac Magnetic Resonance Imaging, Multi-modality, Late Gadolinium Enhanced}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02401643v3/file/stacom_ms_seg_hal.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02401643}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{marinescu:hal-03374569, ADDRESS = {Shenzhen, China}, AUTHOR = {R azvan Marinescu and Marco Lorenzi and Stefano Blumberg and Alexandra Young and Pere Planell-Morell and Neil Oxtoby and Arman Eshaghi and Keir Yong and Sebastian Crutch and Polina Golland and Daniel Alexander}, BOOKTITLE = {MICCAI 2019 - 22nd International Conference on Medical Image Computing and Computer-Assisted Intervention}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {860-868}, PUBLISHER = {Springer International Publishing}, SERIES = {Medical Image Computing and Computer Assisted Intervention -- MICCAI 2019}, TITLE = {Disease Knowledge Transfer Across Neurodegenerative Diseases}, VOLUME = {LNCS. LNIP - 11765}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-32245-8_95}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03374569}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{moceri:hal-02161692, ADDRESS = {Paris, France}, AUTHOR = {Pamela Moceri and Nicolas Duchateau and Delphine Baudouy and Céline Sanfiorenzo and Fabien Squara and Emile Ferrari and Maxime Sermesant}, BOOKTITLE = {JE SFC 2019 - 29es Journées Européennes de la Société Française de Cardiologie}, OPTEDITOR = {}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Incremental prognostic value of changes in 3D right ventricular function in pulmonary hypertension}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02161692}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{moceri:hal-02161694, ADDRESS = {Paris, France}, AUTHOR = {Pamela Moceri and Nicolas Duchateau and Delphine Baudouy and Fabien Squara and Emile Ferrari and Maxime Sermesant}, BOOKTITLE = {JE SFC 2019 - 29es Journées Européennes de la Société Française de Cardiologie}, OPTEDITOR = {}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {3D right ventricular strain and shape in volume overload: comparative analysis of Tetralogy of Fallot and atrial septal defect patients}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02161694}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{thanwerdas:hal-02158525, ADDRESS = {Toulouse, France}, AUTHOR = {Yann Thanwerdas and Xavier Pennec}, BOOKTITLE = {GSI 2019 - 4th conference on Geometric Science of Information}, OPTEDITOR = {}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {484--493}, PUBLISHER = {Springer}, SERIES = {Proceedings of Geometric Science of Information}, TITLE = {Exploration of Balanced Metrics on Symmetric Positive Definite Matrices}, VOLUME = {Lecture Notes in Computer Science 11712}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-26980-7_50}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Dually flat connections, SPD matrices, Information geometry}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-02158525/file/Thanwerdas_GSI19_Balanced%20metrics.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02158525}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{thanwerdas:hal-02147020, ADDRESS = {Toulouse, France}, AUTHOR = {Yann Thanwerdas and Xavier Pennec}, BOOKTITLE = {GSI 2019 - 4th conference on Geometric Science of Information}, OPTEDITOR = {}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {502-510}, PUBLISHER = {Springer}, SERIES = {Proceedings of Geometric Science of Information}, TITLE = {Is affine invariance well defined on SPD matrices? A principled continuum of metrics}, VOLUME = {Lecture Notes in Computer Science 11712}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-26980-7_52}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {SPD matrices, Riemannian symmetric spaces}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-02147020/file/main.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02147020}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{wang:hal-02196557, ADDRESS = {Shenzhen, China}, AUTHOR = {Zihao Wang and Clair Vandersteen and Thomas Demarcy and Dan Gnansia and Charles Raffaelli and Nicolas Guevara and Hervé Delingette}, BOOKTITLE = {MICCAI 2019 - 22nd International Conference on Medical Image Computing and Computer Assisted Intervention}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {121-129}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Deep Learning based Metal Artifacts Reduction in post-operative Cochlear Implant CT Imaging}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Metal Artifacts Reduction, Generative adversarial networks}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02196557/file/paper2371.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02196557}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{wimmer:hal-02402475, ADDRESS = {Shenzhen, China}, AUTHOR = {Wilhelm Wimmer and Clair Vandersteen and Nicolas Guevara and Marco Caversaccio and Hervé Delingette}, BOOKTITLE = {MICCAI 2019 - 22nd International Conference on Medical Image Computing and Computer Assisted Intervention}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {3-10}, OPTPUBLISHER = {}, SERIES = {Medical Image Computing and Computer Assisted Intervention -- MICCAI 2019. MICCAI 2019. Lecture Notes in Computer Science}, TITLE = {Robust Cochlear Modiolar Axis Detection in CT}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-32254-0_1}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Approximate maximum like-lihood, Natural growth, Kinematic surface recognition}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02402475}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{yang:hal-02382941, ADDRESS = {Shenzhen, China}, AUTHOR = {Yingyu Yang and Stephane Gillon and Jaume Banus and Pamela Moceri and Maxime Sermesant}, BOOKTITLE = {STACOM 2019 - 10th Workshop on Statistical Atlases and Computational Modelling of the Heart}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Non-Invasive Pressure Estimation in Patients with Pulmonary Arterial Hypertension: Data-driven or Model-based?}, OPTVOLUME = {}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac modelling, Machine learning, Pulmonary hypertension}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02382941/file/stacom_2019.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02382941}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{abinader:hal-01882450, ADDRESS = {Granada, Spain}, AUTHOR = {Abi Nader, Clement and Nicholas Ayache and Philippe Robert and Marco Lorenzi}, BOOKTITLE = {Machine Learning in Clinical Neuroimaging (MLCN) workshop}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Alzheimer's Disease Modelling and Staging through Independent Gaussian Process Analysis of Spatio-Temporal Brain Changes}, OPTVOLUME = {}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Alzheimer's Disease, Disease Progression Modelling, Gaussian Process}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01882450/file/MLCN_2018_no_appendix.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01882450}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{antelmi:hal-02397737, ADDRESS = {Granada, Spain}, AUTHOR = {Luigi Antelmi and Nicholas Ayache and Philippe Robert and Marco Lorenzi}, BOOKTITLE = {Understanding and Interpreting Machine Learning in Medical Image Computing Applications}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {15-23}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Multi-Channel Stochastic Variational Inference for the Joint Analysis of Heterogeneous Biomedical Data in Alzheimer's Disease}, VOLUME = {11038}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02397737v2/file/mcvae.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02397737}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{chakraborty:hal-02024010, ADDRESS = {Kobe, Japan}, AUTHOR = {Bidisha Chakraborty and Sophie Giffard-Roisin and Martino Alessandrini and Brecht Heyde and M Sermesant and Jan d'Hooge}, BOOKTITLE = {IUS 2018 - IEEE International Ultrasonics Symposium}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1-9}, PUBLISHER = {IEEE}, OPTSERIES = {}, TITLE = {Estimation of the Spatial Resolution of a 2D Strain Estimator Using Synthetic Cardiac Images}, OPTVOLUME = {}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-02024010/file/IUS_Proceedings_bidisha_2018.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02024010}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{jia:hal-01860285, ADDRESS = {Granada, Spain}, AUTHOR = {Shuman Jia and Antoine Despinasse and Zihao Wang and Hervé Delingette and Xavier Pennec and Pierre Jaïs and Hubert Cochet and Maxime Sermesant}, BOOKTITLE = {STACOM: Statistical Atlases and Computational Models of the Heart. Atrial Segmentation and LV Quantification Challenges}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {221-229}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Automatically Segmenting the Left Atrium from Cardiac Images Using Successive 3D U-Nets and a Contour Loss}, VOLUME = {11395}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-12029-0_24}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {distance map, ensemble prediction, loss function, contour loss, left atrium, deep learning, segmentation, 3D U-Net}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01860285v4/file/Segmenting_STACOM_Cameraready-2.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01860285}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{jia:hal-01860274, ADDRESS = {Granada, Spain}, AUTHOR = {Shuman Jia and Nicolas Duchateau and Pamela Moceri and Maxime Sermesant and Xavier Pennec}, BOOKTITLE = {Shape in Medical Imaging. ShapeMI 2018.}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {116-124}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Parallel Transport of Surface Deformations from Pole Ladder to Symmetrical Extension}, VOLUME = {11167}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-04747-4_11}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01860274/file/Paper.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01860274}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{krebs:hal-01845688, ADDRESS = {Granada, Spain}, AUTHOR = {Julian Krebs and Tommaso Mansi and Boris Mailhé and Nicholas Ayache and Hervé Delingette}, BOOKTITLE = {Deep Learning in Medical Image Analysis (MICCAI workshop)}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Unsupervised Probabilistic Deformation Modeling for Robust Diffeomorphic Registration}, OPTVOLUME = {}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Image registration, Deep learning, Medical imaging analysis}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01845688/file/32_dlmia18.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01845688}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{lorenzi:hal-01843006, ADDRESS = {Stockholm, Sweden}, AUTHOR = {Marco Lorenzi and Maurizio Filippone}, BOOKTITLE = {ICML 2018 - The 35th International Conference on Machine Learning}, OPTEDITOR = {}, MONTH = {July}, NOTE = {13 pages}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {3233-3242}, OPTPUBLISHER = {}, SERIES = {PMLR - Proceedings of Machine Learning Research}, TITLE = {Constraining the Dynamics of Deep Probabilistic Models}, VOLUME = {80}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {machine learning, dynamical systems, gradient matching, gaussian process}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01843006}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{moceri:hal-01994488, ADDRESS = {Munich, Germany}, AUTHOR = {Pamela Moceri and Nicolas Duchateau and D Baudouy and C Sanfiorenzo and F Squara and E. Ferrari and M Sermesant}, BOOKTITLE = {ESC congress}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Incremental prognostic value of changes in 3D right ventricular function in pulmonary hypertension}, OPTVOLUME = {}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01994488}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{moceri:hal-01994486, ADDRESS = {Munich, Germany}, AUTHOR = {Pamela Moceri and Nicolas Duchateau and Delphine Baudouy and Fabien Squara and Emile Ferrari and M Sermesant}, BOOKTITLE = {ESC congress}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Volume overload impact on 3D right ventricular shape and strain: comparative analysis of tetralogy of Fallot and atrial septal defect patients}, OPTVOLUME = {}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01994486}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{moceri:hal-01994483, ADDRESS = {Milan, Italy}, AUTHOR = {Pamela Moceri and Nicolas Duchateau and N Dursent and Xavier Iriart and Sébastien Hascoet and Delphine Baudouy and Emile Ferrari and M Sermesant}, BOOKTITLE = {EuroEcho 2018 - 22nd Annual Congressof the European Association of Cardiovascular Imaging}, OPTEDITOR = {}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Right ventricular remodelling in CHD-PAH patients using 3D speckle tracking}, OPTVOLUME = {}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01994483}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{moceri:hal-01994484, ADDRESS = {Milan, Italy}, AUTHOR = {Pamela Moceri and Nicolas Duchateau and Benjamin Sartre and M Sermesant and Emile Ferrari}, BOOKTITLE = {Euroecho}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Right ventricular function in acute pulmonary embolism: a three-dimensional strain study}, OPTVOLUME = {}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01994484}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{orlhac:hal-01736154, ADDRESS = {Lille, France}, AUTHOR = {Fanny Orlhac and Charles Bouveyron and Thierry Pourcher and Lun Jing and Jean-Marie Guigonis and Jacques Darcourt and Nicholas Ayache and Olivier Humbert}, BOOKTITLE = {2018 - 4èmes Journées Francophones de Médecine Nucléaire}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, NUMBER = {3}, OPTORGANIZATION = {}, PAGES = {169}, OPTPUBLISHER = {}, SERIES = {Médecine Nucléaire}, TITLE = {Identification des cancers mammaires triple-négatifs : analyse statistique de variables radiomiques issues des images TEP et de variables métabolomiques}, VOLUME = {42}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Analyse de texture, Cancer du sein, Hétérogénéité tumorale, Traitement des images, Triple-négatif}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01736154/file/JFMN_Radio_Metabo_version_HAL.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01736154}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{orlhac:hal-01736147, ADDRESS = {Lille, France}, AUTHOR = {Fanny Orlhac and Olivier Humbert and Sarah Boughdad and Maud Lasserre and Michael Soussan and Christophe Nioche and Nicholas Ayache and Jacques Darcourt and Frédérique Frouin and Irène Buvat}, BOOKTITLE = {2018 - 4èmes Journées Francophones de Médecine Nucléaire}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, NUMBER = {3}, OPTORGANIZATION = {}, PAGES = {170}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Validation d'une méthode d'harmonisation des mesures SUV et des variables radiomiques pour les études TEP multicentriques rétrospectives}, VOLUME = {42}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Etude multicentrique, Normalisation, Quantification, Analyse de texture, Hétérogénéité tumorale}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01736147/file/JFMN_ComBat_version_HAL.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01736147}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{orlhac:hal-01759334, ADDRESS = {Philadelphia, United States}, AUTHOR = {Fanny Orlhac and Olivier Humbert and Sarah Boughdad and Maud Lasserre and Michael Soussan and Christophe Nioche and Nicholas Ayache and Jacques Darcourt and Frédérique Frouin and Irène Buvat}, BOOKTITLE = {SNMMI Annual Meeting}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {288}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Validation of a harmonization method to correct for SUV and radiomic features variability in multi-center studies}, VOLUME = {59}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01759334/file/Abstract_SNM_ComBat.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01759334}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{orlhac:hal-01736164, ADDRESS = {Nice, France}, AUTHOR = {Fanny Orlhac and Olivier Humbert and Thierry Pourcher and Lun Jing and Jean-Marie Guigonis and Jacques Darcourt and Nicholas Ayache and Charles Bouveyron}, BOOKTITLE = {12ème Conférence Francophone d'Epidémiologie Clinique (EPICLIN) et 25èmes Journées des statisticiens des Centre de Lutte Contre le Cancer (CLCC)}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, NUMBER = {s3}, OPTORGANIZATION = {}, PAGES = {S180-S181}, OPTPUBLISHER = {}, SERIES = {Revue d'épidémiologie et de santé publique}, TITLE = {Analyse statistique de données radiomiques et métabolomiques : prédiction des lésions mammaires triple-négatives}, VOLUME = {66}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1016/j.respe.2018.03.307}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Métabolomique, Analyse statistique, Analyse discriminante, Sélection de variables, Radiomique}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01736164/file/Abstract_EPICLIN_version_HAL.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01736164}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{orlhac:hal-01759330, ADDRESS = {Philadelphia, United States}, AUTHOR = {Fanny Orlhac and Olivier Humbert and Thierry Pourcher and Lun Jing and Jean-Marie Guigonis and Jacques Darcourt and Nicholas Ayache and Charles Bouveyron}, BOOKTITLE = {SNMMI Annual Meeting}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, NUMBER = {supplement 1}, OPTORGANIZATION = {}, PAGES = {1755}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Statistical analysis of PET radiomic features and metabolomic data: prediction of triple-negative breast cancer}, VOLUME = {59}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01759330/file/Abstract_SNM_Radio_Metabo.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01759330}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{silva:hal-01963637, ADDRESS = {Venice, Italy}, AUTHOR = {Santiago Silva and Boris A Gutman and Eduardo Romero and Paul M. Thompson and Andre Altmann and Marco Lorenzi}, BOOKTITLE = {International Symposium on Biomedical Imaging}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Federated Learning in Distributed Medical Databases: Meta-Analysis of Large-Scale Subcortical Brain Data}, OPTVOLUME = {}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01963637}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{wei:hal-01810822, ADDRESS = {Granada, Spain}, AUTHOR = {Wen Wei and Emilie Poirion and Benedetta Bodini and Stanley Durrleman and Nicholas Ayache and Bruno Stankoff and Olivier Colliot}, BOOKTITLE = {MICCAI 2018 -- 21st International Conference On Medical Image Computing & Computer Assisted Intervention}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Learning Myelin Content in Multiple Sclerosis from Multimodal MRI through Adversarial Training}, VOLUME = {11072}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1007/978-3-030-00931-1_59}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01810822/file/paper.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01810822}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{wei:hal-01723070, ADDRESS = {Paris, France}, AUTHOR = {Wen Wei and Emilie Poirion and Benedetta Bodini and Stanley Durrleman and Olivier Colliot and Bruno Stankoff and Nicholas Ayache}, BOOKTITLE = {ISMRM-ESMRMB 2018 - Joint Annual Meeting}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1-6}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {FLAIR MR Image Synthesis By Using 3D Fully Convolutional Networks for Multiple Sclerosis}, OPTVOLUME = {}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01723070/file/ismrm_2018_wen_final.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01723070}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{cedilnik:hal-01498672, ADDRESS = {Toronto, Canada}, AUTHOR = {Nicolas Cedilnik and Josselin Duchateau and Rémi Dubois and Pierre Jaïs and Hubert Cochet and Maxime Sermesant}, BOOKTITLE = {Functional Imaging and Modelling of the Heart}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {271-279}, PUBLISHER = {Springer International Publishing}, SERIES = {Functional Imaging and Modelling of the Heart}, TITLE = {VT Scan: Towards an Efficient Pipeline from Computed Tomography Images to Ventricular Tachycardia Ablation}, OPTVOLUME = {}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-59448-4_26}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Electrophysiological modelling, Heart imaging, Ventricular tachycardia, Catheter ablation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01498672v2/file/vtscan.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01498672}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{devilliers:hal-01481074, ADDRESS = {Boone, United States}, AUTHOR = {Loïc Devilliers and Xavier Pennec and Stéphanie Allassonnière}, BOOKTITLE = {Information Processing in Medical Imaging. IPMI 2017.}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {Martin Styner and Marc Niethammer and Dinggang Shen and Stephen Aylward and Ipek Oguz and Hongtu Zhu}, PAGES = {16-27}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Inconsistency of Template Estimation with the Fréchet mean in Quotient Space}, VOLUME = {10265}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-59050-9_2}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01481074v2/file/IPMIversionHAL.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01481074}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{doste:hal-01533389, ADDRESS = {Toronto, Canada}, AUTHOR = {Rubén Doste and David Soto-Iglesias and Gabriel Bernardino and Rafael Sebastian and Sophie Giffard-Roisin and Rocìo Cabrera-Lozoya and Maxime Sermesant and Antonio Berruezo and Damián Sánchez-Quintana and Oscar Camara}, BOOKTITLE = {Functional imaging and modelling of the heart 2017}, EDITOR = {in Computer Science, Lecture Notes}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, SERIES = {Functional imaging and modelling of the heart 2017 Proceedings}, TITLE = {A Rule-Based Method to Model Myocardial Fiber Orientation for Simulating Ventricular Outflow Tract Arrhythmias}, VOLUME = {10263}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-59448-4_33}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Fiber orientation, Rule-based method, Electrophysiological simulations, Arrhythmias, Outflow tracts}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01533389}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{giffardroisin:hal-01498602, ADDRESS = {Toronto, Canada}, AUTHOR = {Sophie Giffard-Roisin and Hervé Delingette and Thomas Jackson and Lauren Fovargue and Jack Lee and Aldo Rinaldi and Nicholas Ayache and Reza Razavi and Maxime Sermesant}, BOOKTITLE = {Functional imaging and modelling of the heart 2017}, EDITOR = {Mihaela Pop}, MONTH = {June}, NOTE = {Best paper award FIMH 2017, category: Electrophysiology}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {230-238}, PUBLISHER = {Springer International Publishing}, SERIES = {Functional imaging and modelling of the heart 2017}, TITLE = {Sparse Bayesian Non-linear Regression for Multiple Onsets Estimation in Non-invasive Cardiac Electrophysiology}, OPTVOLUME = {}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-59448-4_22}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {ECG Imaging, Cardiac Electrophysiology, Relevance Vector Machine, Personalisation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01498602/file/FIMH_2017_cameraready.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01498602}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{jia:hal-01574831, ADDRESS = {Toronto, Canada}, AUTHOR = {Shuman Jia and Claudia Camaioni and Marc-Michel Rohé and Pierre Jaïs and Xavier Pennec and Hubert Cochet and Maxime Sermesant}, BOOKTITLE = {FIMH 2017 - International Conference on Functional Imaging and Modeling of the Heart}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {314 - 321}, OPTPUBLISHER = {}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Prediction of Post-Ablation Outcome in Atrial Fibrillation Using Shape Parameterization and Partial Least Squares Regression}, VOLUME = {10263}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-59448-4_30}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {atrial fibrillation, catheter ablation, post-ablation outcome, left atrial remodeling, statistical shape analysis, partial least squares, regression}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01574831/file/FIMH_ShapePLS-1.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01574831}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{krebs:hal-01569447, ADDRESS = {Quebec, Canada}, AUTHOR = {Julian Krebs and Tommaso Mansi and Hervé Delingette and Li Zhang and Florin C Ghesu and Shun Miao and Andreas Maier and Nicholas Ayache and Rui Liao and Ali Kamen}, BOOKTITLE = {Medical Image Computing and Computer Assisted Interventions (MICCAI)}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {344-352}, PUBLISHER = {Springer International Publishing}, SERIES = {Medical Image Computing and Computer Assisted Intervention -- MICCAI 2017}, TITLE = {Robust non-rigid registration through agent-based action learning}, OPTVOLUME = {}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-66182-7_40}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {reinforcement learning, Image registration}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01569447/file/miccai17-2.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01569447}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{lluch:hal-01533371, ADDRESS = {Toronto, Canada}, AUTHOR = {Eric Lluch and Rubén Doste and Sophie Giffard-Roisin and Alexandre This and Maxime Sermesant and Oscar Camara and de Craene, Mathieu and Hernán G Morales}, BOOKTITLE = {FIMH 2017 - 9th International Conference on Functional Imaging and Modelling of the Heart}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {333-343}, PUBLISHER = {Springer International Publishing}, SERIES = {Functional imaging and modelling of the heart 2017 Proceedings}, TITLE = {Smoothed Particle Hydrodynamics for Electrophysiological Modeling: An Alternative to Finite Element Methods}, VOLUME = {141}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-59448-4_32}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Meshless, FEM, Cardiac electrophysiology, SPH}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01533371/file/paperFIMH.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01533371}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{marinescu:hal-01843387, ADDRESS = {Boone, United States}, AUTHOR = {R azvan Valentin Marinescu and Arman Esaghi and Marco Lorenzi and Alexandra L. Young and Neil P. Oxtoby and Sara Garbarino and Timothy J. Shakespeare and Sebastian Crutch and Daniel C Alexander}, BOOKTITLE = {International Conference on Information Processing in Medical Imaging (IPMI)}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A Vertex Clustering Model for Disease Progression: Application to Cortical Thickness Images}, OPTVOLUME = {}, YEAR = {2017}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01843387}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{mcleod:hal-01574837, ADDRESS = {Toronto, Canada}, AUTHOR = {Kristin Mcleod and Maxime Sermesant and Xavier Pennec}, BOOKTITLE = {FIMH 2017 - 9th International Conference on Functional Imaging and Modeling of the Heart}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {51 - 59}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Improving Understanding of Long-Term Cardiac Functional Remodelling via Cross-Sectional Analysis of Polyaffine Motion Parameters}, VOLUME = {10263}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-59448-4_6}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01574837/file/MeanMotionEvolutionFIMH-1.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01574837}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{moceri:hal-02161690, ADDRESS = {Paris, France}, AUTHOR = {Pamela Moceri and Nicolas Duchateau and Delphine Baudouy and Elie-Dan Schouver and P Bouvier and S Leroy and P Cerboni and P Gibelin and Maxime Sermesant and Emile Ferrari}, BOOKTITLE = {Journées Européennes de la Société Française de Cardiologie}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Three-dimensional speckle tracking of the right ventricle : implications on survival}, OPTVOLUME = {}, YEAR = {2017}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02161690}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{moceri:hal-01994491, ADDRESS = {Lisbon, Portugal}, AUTHOR = {P Moceri and M Sermesant and D Baudouy and E. Ferrari and Nicolas Duchateau}, BOOKTITLE = {Euroecho-Imaging 2017 - Twenty-First Annual Meeting of the European Association of Echocardiography}, OPTEDITOR = {}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {3D right ventricular strain: comparative analysis of Tetralogy of Fallot and atrial septal defect}, OPTVOLUME = {}, YEAR = {2017}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01994491}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{mollero:hal-01569735, ADDRESS = {Québec City, Canada}, AUTHOR = {Roch Molléro and Hervé Delingette and Manasi Datar and Tobias Heimann and Jakob Hauser and Dilveer Panesar and Alexander Jones and Andrew Taylor and Marcus Kelm and Titus Kuehne and Marcello Chinali and Gabriele Rinelli and Nicholas Ayache and Xavier Pennec and Maxime Sermesant}, BOOKTITLE = {Medical Image Computing and Computer Assisted Intervention (MICCAI)}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {350-358}, PUBLISHER = {Springer International Publishing}, SERIES = {Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2017}, TITLE = {Longitudinal Analysis using Personalised 3D Cardiac Models with Population-Based Priors: Application to Paediatric Cardiomyopathies}, OPTVOLUME = {}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-66185-8_40}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01569735/file/paper729.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01569735}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{mollero:hal-01522598, ADDRESS = {Toronto, Canada}, AUTHOR = {Roch Molléro and Jakob Hauser and Xavier Pennec and Manasi Datar and Hervé Delingette and Alexander Jones and Nicholas Ayache and Tobias Heimann and Maxime Sermesant}, BOOKTITLE = {FIMH 2017 - 9th international conference on Functional Imaging and Modeling of the Heart}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {432-440}, PUBLISHER = {Springer International Publishing}, SERIES = {Functional Imaging and Modelling of the Heart}, TITLE = {Longitudinal Parameter Estimation in 3D Electromechanical Models: Application to Cardiovascular Changes in Digestion}, OPTVOLUME = {}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-59448-4_41}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01522598/file/FIMH_2017_Camera_Ready.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01522598}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{pennec:hal-01574895, ADDRESS = {Paris, France}, AUTHOR = {Xavier Pennec}, BOOKTITLE = {Geometric Sciences of Information (GSI 2017)}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {20-28}, PUBLISHER = {Springer International Publishing}, SERIES = {Geometric Science of Information}, TITLE = {Sample-limited L p Barycentric Subspace Analysis on Constant Curvature Spaces}, OPTVOLUME = {}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-68445-1_3}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01574895/file/62-Pennec.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01574895}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{rohe:hal-01557417, ADDRESS = {Québec, Canada}, AUTHOR = {Marc-Michel Rohé and Manasi Datar and Tobias Heimann and Maxime Sermesant and Xavier Pennec}, BOOKTITLE = {MICCAI 2017 - the 20th International Conference on Medical Image Computing and Computer Assisted Intervention}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {266-274}, PUBLISHER = {Springer International Publishing}, SERIES = {Medical Image Computing and Computer Assisted Intervention -- MICCAI 2017}, TITLE = {SVF-Net: Learning Deformable Image Registration Using Shape Matching}, OPTVOLUME = {}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-66182-7_31}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Deep Learning, Cardiac Imaging, Registration}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01557417/file/paper_324.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01557417}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{rohe:hal-01575297, ADDRESS = {Québec, Canada}, AUTHOR = {Marc-Michel Rohé and Maxime Sermesant and Xavier Pennec}, BOOKTITLE = {STACOM: Statistical Atlases and Computational Models of the Heart. ACDC and MMWHS Challenges}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {170-177}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Automatic Multi-Atlas Segmentation of Myocardium with SVF-Net}, VOLUME = {10663}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-75541-0_18}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01575297/file/stacom_seg_v2.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01575297}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{bruse:hal-01519862, ADDRESS = {Heidelberg, Germany}, AUTHOR = {Jan L. Bruse and Kristin Mcleod and Elena Cervi and Giovanni Biglino and T.-y Hsia and Maxime Sermesant and Xavier Pennec and Andrew Taylor and Silvia Schievano}, BOOKTITLE = {Computer Assisted Radiology, 30th International Congress and Exhibition}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Discovering clusters in pathologic cardiac morphology: MR-based hierarchical 3D shape clustering of surgically repaired aortic arches}, OPTVOLUME = {}, YEAR = {2016}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01519862}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{cury:hal-01440061, ADDRESS = {Athens, Greece}, AUTHOR = {Claire Cury and Marc M Lorenzi and David M Cash and Jennifer M Nicholas and Alexandre M Routier and Jonathan Rohrer and Sebastien M Ourselin and Stanley M Durrleman and Marc M Modat}, BOOKTITLE = {SeSAMI 2016 - First International Workshop Spectral and Shape Analysis in Medical Imaging}, EDITOR = {Martin Reuter and Christian Wachinger and Hervé Lombaert}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {63 - 75}, PUBLISHER = {Springer}, SERIES = {Spectral and Shape Analysis in Medical Imaging}, TITLE = {Spatio-Temporal Shape Analysis of Cross-Sectional Data for Detection of Early Changes in Neurodegenerative Disease}, VOLUME = {10126}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-51237-2_6}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {thalamus, spatio-temporal geodesic regression, FTD, parallel transport, shape}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01440061/file/Cury_SSAMI_16.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01440061}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{demarcy:hal-01398676, ADDRESS = {Paris, France}, AUTHOR = {Thomas Demarcy and Clair Vandersteen and Dan Gnansia and Charles Raffaelli and Hervé Delingette and Nicholas Ayache and Nicolas Guevara}, BOOKTITLE = {123ème Congrès de la Société Française d'Oto-Rhino-Laryngologie et de Chirurgie de la Face et du Cou}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {Congrès de la Société Française d'Oto-Rhino-Laryngologie et de Chirurgie de la Face et du Cou}, OPTPAGES = {}, OPTPUBLISHER = {}, SERIES = {Annales françaises d'Oto-rhino-laryngologie et de Pathologie Cervico-faciale}, TITLE = {Estimation de la position post-implantation cochléaire de l'électrode à partir d'images tomodensitométriques cliniques}, OPTVOLUME = {}, YEAR = {2016}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cochlear Implant, Computed Tomography}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01398676}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{demarcy:hal-01393323, ADDRESS = {Athens, Greece}, AUTHOR = {Thomas Demarcy and Clair Vandersteen and Charles Raffaelli and Dan Gnansia and Nicolas Guevara and Nicholas Ayache and Hervé Delingette}, BOOKTITLE = {5th International Workshop on Clinical Image-Based Procedures - CLIP 2016, Held in Conjunction with MICCAI 2016}, EDITOR = {Raj Shekhar and Stefan Wesarg and Miguel Angel Gonzalez Ballester and Klaus Drechsler and Yoshinobu Sato and Marius Erdt and Marius George Linguraru and Cristina Oyarzun Laura}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {27-35}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Uncertainty Quantification of Cochlear Implant Insertion from CT Images}, VOLUME = {9958}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-46472-5_4}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {cochlear implant, uncertainty quantification, shape modeling}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01393323/file/demarcymiccai.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01393323}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{duchateau:hal-02161688, ADDRESS = {Paris, France}, AUTHOR = {Nicolas Duchateau and de Craene, Mathieu and Pascal Allain and Eric Saloux and Maxime Sermesant}, BOOKTITLE = {GRIC - Journées Francophones de Radiologie}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Infarct localization from myocardial deformation: Prediction and uncertainty quantification by regression from a low-dimensional space}, OPTVOLUME = {}, YEAR = {2016}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02161688}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{giffardroisin:hal-01372924, ADDRESS = {Athens, Greece}, AUTHOR = {Sophie Giffard-Roisin and Lauren Fovargue and Jessica Webb and Roch Molléro and Jack Lee and Hervé Delingette and Nicholas Ayache and Reza Razavi and Maxime Sermesant}, BOOKTITLE = {7th International Statistical Atlases and Computational Modeling of the Heart (STACOM) Workshop, Held in Conjunction with MICCAI 2016}, OPTEDITOR = {}, MONTH = {October}, NOTE = {In press}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Estimation of Purkinje Activation from ECG: an Intermittent Left Bundle Branch Block Study}, OPTVOLUME = {}, YEAR = {2016}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Electrophysiology, Electrophysiological Model, Forward EP Model, Parameter Estimation, Purkinje System}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01372924/file/Stacom_sophie_ECG.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01372924}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{jia:hal-01373238, ADDRESS = {Athens, Greece}, AUTHOR = {Shuman Jia and Loïc Cadour and Hubert Cochet and Maxime Sermesant}, BOOKTITLE = {7th International Statistical Atlases and Computational Modeling of the Heart (STACOM) Workshop, Held in Conjunction with MICCAI 2016}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {211-219}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {STACOM-SLAWT Challenge: Left Atrial Wall Segmentation and Thickness Measurement Using Region Growing and Marker-Controlled Geodesic Active Contour}, VOLUME = {10124}, YEAR = {2016}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {geodesic active contour, atrial fibrillation, left atrial wall thickness, 3-dimensional image segmentation, cardiac computed tomography (CT), region growing}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01373238/file/STACOM2016_021_final_v1.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01373238}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{marchesseau:hal-01352460, ADDRESS = {Athens, Greece}, AUTHOR = {Stephanie Marchesseau and Nicolas Duchateau and Hervé Delingette}, BOOKTITLE = {7th International Statistical Atlases and Computational Modeling of the Heart (STACOM) Workshop, Held in Conjunction with MICCAI 2016}, OPTEDITOR = {}, MONTH = {October}, NOTE = {In press}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {48-56}, OPTPUBLISHER = {}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Segmentation and registration coupling from short-axis Cine MRI: application to infarct diagnosis}, VOLUME = {10124}, YEAR = {2016}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Regional Volumes, Segmentation, Registration, Infarct diagnosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01352460/file/cMarchesseau_STACOM_2016.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01352460}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{moceri:hal-01315011, ADDRESS = {Rome, Italy}, AUTHOR = {Pamela Moceri and Nicolas Duchateau and Delphine Baudouy and Sylvie Leroy and Priscille Bouvier and Dan Schouver, Elie and Maxime Sermesant and Emile Ferrari}, BOOKTITLE = {European Society of Cardiology (ESC) Congress}, OPTEDITOR = {}, MONTH = {August}, OPTNOTE = {}, NUMBER = {S1}, OPTORGANIZATION = {}, PAGES = {994}, OPTPUBLISHER = {}, SERIES = {European Heart Journal, Abstracts from the European Society of Cardiology (ESC) Congress}, TITLE = {Three-dimensional speckle tracking of the right ventricle: implications on survival in pulmonary hypertension}, VOLUME = {37}, YEAR = {2016}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01315011}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{mollero:hal-01360908, ADDRESS = {Athens, Greece}, AUTHOR = {Roch Molléro and Xavier Pennec and Hervé Delingette and Nicholas Ayache and Maxime Sermesant}, BOOKTITLE = {MICCAI 2016 - Medical Image Computing and Computer Assisted Intervention}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {174-182}, OPTPUBLISHER = {}, SERIES = {MICCAI 2016, Lecture Notes in Computer Science}, TITLE = {A Multiscale Cardiac Model for Fast Personalisation and Exploitation}, VOLUME = {9902}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-46726-9_21}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01360908/file/paper_725.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01360908}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{rohe:hal-01373715, ADDRESS = {Bordeaux, France}, AUTHOR = {Marc-Michel Rohé and Roch Molléro and Maxime Sermesant and Xavier Pennec}, BOOKTITLE = {IEEE - IVMSP Workshop 2016}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {5}, PUBLISHER = {IEEE}, SERIES = {Image, Video, and Multidimensional Signal Processing Workshop (IVMSP), 2016 IEEE 12th}, TITLE = {Highly Reduced Model of the Cardiac Function for Fast Simulation}, OPTVOLUME = {}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1109/IVMSPW.2016.7528214}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Reduction Order Model, Biomechanical Model, Simulation 3D}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01373715/file/IVMSP.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01373715}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{rohe:hal-01373706, ADDRESS = {Athens, Greece}, AUTHOR = {Marc-Michel Rohé and Maxime Sermesant and Xavier Pennec}, BOOKTITLE = {MICCAI 2016 - Medical Image Computing and Computer Assisted Intervention}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, NUMBER = {448-456}, OPTORGANIZATION = {}, PAGES = {300-307}, OPTPUBLISHER = {}, SERIES = {MICCAI 2016, Lecture Notes in Computer Science}, TITLE = {Barycentric Subspace Analysis: a new Symmetric Group-wise Paradigm for Cardiac Motion Tracking}, VOLUME = {9902}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-46726-9_35}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Medical Image Analysis, Atlas Framework, Registration, Manifold atlas}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01373706/file/paper929.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01373706}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{sanchezmartinez:hal-01352285, ADDRESS = {Leipzig, Germany}, AUTHOR = {Sergio Sanchez-Martinez and Nicolas Duchateau and Tamas Erdei and Gabor Kunszt and Anna Degiovanni and Erberto Carluccio and Alan Fraser and Gemma Piella and Bart Bijnens}, BOOKTITLE = {EuroEcho-Imaging}, OPTEDITOR = {}, MONTH = {December}, NOTE = {In press}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, SERIES = {European Heart Journal: Cardiovascular Imaging, Abstracts from the EuroEcho-Imaging congress}, TITLE = {Machine-learning based diagnosis of heart failure with preserved ejection fraction: how much do we agree with the guidelines?}, OPTVOLUME = {}, YEAR = {2016}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01352285}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{zhou:hal-02048117, ADDRESS = {Athens, Greece}, AUTHOR = {Yitian Zhou and de Craene, Mathieu and Maxime Sermesant and Olivier Bernard}, BOOKTITLE = {International Workshop on Statistical Atlases and Computational Models of the Heart}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {39-47}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Phase-Based Registration of Cardiac Tagged MR Images by Incorporating Anatomical Constraints}, OPTVOLUME = {}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-52718-5_5}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac tagged MR, Strain, Tag number constant constraint}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02048117}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{zhou:hal-02048135, ADDRESS = {Athens, Greece}, AUTHOR = {Yitian Zhou and de Craene, Mathieu and Oudom Somphone and Maxime Sermesant and Olivier Bernard}, BOOKTITLE = {International Workshop on Simulation and Synthesis in Medical Imaging}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {108-117}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Generation of Realistic 4D Synthetic CSPAMM Tagged MR Sequences for Benchmarking Cardiac Motion Tracking Algorithms}, OPTVOLUME = {}, YEAR = {2016}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-46630-9_11}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02048135}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{alessandrini:hal-01265886, ADDRESS = {Nice, France}, AUTHOR = {Martino Alessandrini and Adrian Basarab and de Craene, Mathieu and Maxime Sermesant and Hervé Liebgott and Olivier Bernard and Jan d'Hooge}, BOOKTITLE = {EUSIPCO 2015 - 23rd European Signal Processing Conference}, OPTEDITOR = {}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {2796-2800}, PUBLISHER = {IEEE}, OPTSERIES = {}, TITLE = {The role of the image phase in cardiac strain imaging}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1109/EUSIPCO.2015.7362894}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Simulations, Medical imaging, Heart, Quality assurance, Echocardiography, MRI, Deformation imaging}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01265886v2/file/alessandrini_14906.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01265886}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{alessandrini:hal-01117557, ADDRESS = {New York, United States}, AUTHOR = {Martino Alessandrini and Brecht Heyde and Sophie Giffard-Roisin and Hervé Delingette and Maxime Sermesant and Pascal Allain and Olivier Bernard and de Craene, Mathieu and Jan d'Hooge}, BOOKTITLE = {International Symposium on BIOMEDICAL IMAGING: From Nano to Macro (ISBI 2015)}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {756-759}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Generation of ultra-realistic synthetic echocardiographic sequences to facilitate standardization of deformation imaging}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1109/ISBI.2015.7163982}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01117557}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{allassonniere:hal-01203816, ADDRESS = {Munich, Germany}, AUTHOR = {Stéphanie Allassonnière and Loïc Devilliers and Xavier Pennec}, BOOKTITLE = {Mathematical Foundations of Computational Anatomy (MFCA'15)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {131-142}, OPTPUBLISHER = {}, SERIES = {Proceedings of the fifth international workshop on Mathematical Foundation sof Computational Anatomy (MFCA'15)}, TITLE = {Estimating the Template in the Total Space with the Fréchet Mean on Quotient Spaces may have a Bias: a Case Study on Vector Spaces Quotiented by the Group of Translations}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01203816/file/MFCA15_4_1.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01203816}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{audigier:hal-01184543, ADDRESS = {Munich, Germany}, AUTHOR = {Chloé Audigier and Tommaso Mansi and Hervé Delingette and Saikiran Rapaka and Tiziano Passerini and Viorel Mihalef and Raoul Pop and Michele Diana and Luc Soler and Ali Kamen and Dorin Comaniciu and Nicholas Ayache}, BOOKTITLE = {Computational Biomechanics for Medicine X}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {29-40}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Challenges to Validate Multi-physics Model of Liver Tumor Radiofrequency Ablation from Pre-clinical Data}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01184543/file/CBMX_2015_CHLOE_AUDIGIER-v2.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01184543}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{bleton:hal-01203579, ADDRESS = {Munich, Germany}, AUTHOR = {Héloïse Bleton and Jan Margeta and Herve Lombaert and Hervé Delingette and Nicholas Ayache}, BOOKTITLE = {Statistical Atlases and Computational Modeling of the Heart (STACOM 2015)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Myocardial Infarct Localization using Neighborhood Approximation Forests}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Machine Learning, Neighbourhood Approximation Forests, myocardial infarction, wall thickness}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01203579/file/MICCAI-STACOM-Myocardial-Infarction-NAF.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01203579}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{bruse:hal-01205515, ADDRESS = {Munich, Germany}, AUTHOR = {Jan L. Bruse and Kristin Mcleod and Giovanni Biglino and Hopewell N. Ntsinjana and Claudio Capelli and Tain-Yen Hsia and Maxime Sermesant and Xavier Pennec and Andrew Taylor and Silvia Schievano}, BOOKTITLE = {Statistical Atlases and Computational Modeling of the Heart (STACOM 2015)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {A Non-parametric Statistical Shape Model for Assessment of the Surgically Repaired Aortic Arch in Coarctation of the Aorta: How Normal is Abnormal?}, VOLUME = {9534}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-28712-6_3}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01205515/file/Bruse_STACOM2015_04.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01205515}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{courtecuisse:hal-01184113, ADDRESS = {Hamburg, Germany}, AUTHOR = {Hadrien Courtecuisse and Yinoussa Adagolodjo and Hervé Delingette and Christian Duriez}, BOOKTITLE = {2015 IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS)}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {591-596}, PUBLISHER = {IEEE}, OPTSERIES = {}, TITLE = {Haptic Rendering of Hyperelastic Models with Friction}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1109/IROS.2015.7353432}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01184113/file/IROS15_1122_FI.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01184113}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{duchateau:hal-01207989, ADDRESS = {New York, France}, AUTHOR = {Nicolas Duchateau and Nerea Mangado and Mario Ceresa and Pavel Mistrik and Sergio Vera and Gonzalez Ballester, Miguel Angel}, BOOKTITLE = {Biomedical Imaging (ISBI), 2015 IEEE 12th International Symposium on}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1398 - 1401}, OPTPUBLISHER = {}, SERIES = {Biomedical Imaging (ISBI), 2015 IEEE 12th International Symposium on}, TITLE = {Virtual cochlear electrode insertion via parallel transport frame}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1109/ISBI.2015.7164137}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01207989/file/cDuchateau_ISBI_2015_FINALok.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01207989}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{duchateau:hal-01208019, ADDRESS = {Munich, Germany}, AUTHOR = {Nicolas Duchateau and Maxime Sermesant}, BOOKTITLE = {Statistical Atlases and Computational Modeling of the Heart (STACOM 2015)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, NUMBER = {51-59}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, SERIES = {Statistical Atlases and Computational Modeling of the Heart}, TITLE = {Prediction of infarct localization from myocardial deformation}, VOLUME = {9534}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-28712-6_6}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01208019v2/file/cDuchateau_STACOM_2015b-ok.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01208019}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{duchateau:hal-01217956, ADDRESS = {Seville, Spain}, AUTHOR = {Nicolas Duchateau and Maxime Sermesant and Pierre Gibelin and Emile Ferrari and Pamela Moceri}, BOOKTITLE = {EuroEcho-Imaging}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {S2}, OPTORGANIZATION = {}, PAGES = {ii69}, OPTPUBLISHER = {}, SERIES = {European Heart Journal: Cardiovascular Imaging, Abstracts from the EuroEcho-Imaging congress.}, TITLE = {3D regional right ventricular function in pulmonary hypertension}, VOLUME = {16}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1093/ehjci/jev251}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01217956}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{duchateau:hal-01217963, ADDRESS = {Seville, Spain}, AUTHOR = {Nicolas Duchateau and de Craene, Mathieu and Damien Legallois and Fabien Labombarda and Arnaud Pellissier and Maxime Sermesant and Eric Saloux}, BOOKTITLE = {EuroEcho-Imaging}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {S2}, OPTORGANIZATION = {}, PAGES = {ii81}, OPTPUBLISHER = {}, SERIES = {European Heart Journal: Cardiovascular Imaging, Abstracts from the EuroEcho-Imaging congress}, TITLE = {Statistical significance of 3D motion and deformation indexes for the analysis of LAD infarction}, VOLUME = {16}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1093/ehjci/jev278}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01217963}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{gori:hal-01142628, ADDRESS = {Isle of Skye, United Kingdom}, AUTHOR = {Pietro Gori and Olivier Colliot and Linda Marrakchi-Kacem and Yulia Worbe and Alexandre Routier and Cyril Poupon and Andreas Hartmann and Nicholas Ayache and Stanley Durrleman}, BOOKTITLE = {IPMI - Information Processing in Medical Imaging}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {275-287}, OPTPUBLISHER = {}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Joint Morphometry of Fiber Tracts and Gray Matter structures using Double Diffeomorphisms}, VOLUME = {9123}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-19992-4_21}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {diffeomorphism, morphometry, atlas, structural connectivity, shape}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01142628/file/19.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01142628}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{gori:hal-01187461, ADDRESS = {Honolulu, United States}, AUTHOR = {Pietro Gori and Olivier Colliot and Linda Marrakchi-Kacem and Yulia Worbe and Alexandre Routier and Cyril Poupon and Andreas Hartmann and Nicholas Ayache and Stanley Durrleman}, BOOKTITLE = {Organisation for Human Brain Mapping}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Unified analysis of shape and structural connectivity of neural pathways}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01187461/file/OHBM2015_Gori.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01187461}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{gupta:hal-01261115, ADDRESS = {Munich, Germany}, AUTHOR = {Vikash Gupta and Grégoire Malandain and Nicholas Ayache and Xavier Pennec}, BOOKTITLE = {MICCAI 2015 Workshop on Computational Diffusion MRI (CDMRI'15)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {99-108}, OPTPUBLISHER = {}, SERIES = {Computational Diffusion MRI}, TITLE = {A framework for creating population specific multimodal brain atlas using clinical T1 and diffusion tensor images}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-28588-7_9}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Multimodal brain atlas, Probabilistic white matter parcel-lation map, HIV, DTI-T1 brain template}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01261115/file/Gupta_CDMRI_2015.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01261115}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{khanal:hal-01217080, ADDRESS = {Munich, France}, AUTHOR = {Bishesh Khanal and Marco Lorenzi and Nicholas Ayache and Xavier Pennec}, BOOKTITLE = {Workshop on Computational Biomechanics for Medicine - X}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {167--176}, PUBLISHER = {Springer International Publishing}, SERIES = {Computational Biomechanics for Medicine: Imaging, Modeling and Computing}, TITLE = {Simulating Patient Specific Multiple Time-point MRIs From a Biophysical Model of Brain Deformation in Alzheimer's Disease}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-28329-6_15}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {biophysical modeling, Alzheimer's disease, biomechanical simulation, MRI, longitudinal MRI}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01217080/file/khanal2015_CBM.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01217080}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{lombaert:hal-01203570, ADDRESS = {Scotland, United Kingdom}, AUTHOR = {Herve Lombaert and Michael Arcaro and Nicholas Ayache}, BOOKTITLE = {Information Processing in Medical Imaging (IPMI 2015)}, EDITOR = {Sebastien Ourselin and Daniel C. Alexander and Carl-Fredrik Westin and M. Jorge Cardoso}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {474-487}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Brain Transfer: Spectral Analysis of Cortical Surfaces and Functional Maps}, VOLUME = {9123}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-19992-4_37}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01203570/file/IPMI-BrainTransfer.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01203570}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{lombaert:hal-01203574, ADDRESS = {Chicago, United States}, AUTHOR = {Herve Lombaert and Michael Arcaro and Sabine Kastner and Nicholas Ayache}, BOOKTITLE = {Society for Neuroscience (SfN)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Brain Transfer for the Analysis of Cortical Data}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01203574}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{lombaert:hal-01203568, ADDRESS = {Munich, Germany}, AUTHOR = {Herve Lombaert and Antonio Criminisi and Nicholas Ayache}, BOOKTITLE = {Medical Image Computingand Computer Assisted Intervention (MICCAI 2015)}, EDITOR = {Nassir Navab and Joachim Hornegger and William M. Wells and Alejandro F. Frangi}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {547-555}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Spectral Forests: Learning of Surface Data, Application to Cortical Parcellation}, VOLUME = {9349}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-24553-9_67}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01203568/file/MICCAI-SpectralForests.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01203568}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{le:hal-01155075, ADDRESS = {Munich, Germany}, AUTHOR = {Matthieu Lê and Hervé Delingette and Jayashree Kalpathy-Cramer and Elizabeth R Gerstner and Tracy Batchelor and Jan Unkelbach and Nicholas Ayache}, BOOKTITLE = {MICCAI - Medical Image Computing and Computer Assisted Intervention - 2015}, EDITOR = {Alejandro F. Frangi and Joachim Hornegger and Nassir Navab and William M. Wells}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {424-432}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science - LNCS}, TITLE = {Bayesian Personalization of Brain Tumor Growth Model}, VOLUME = {9350}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-24571-3_51}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Glioma Modeling, Bayesian, Personalization}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01155075v2/file/paper295.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01155075}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{le:hal-01155078, ADDRESS = {Munich, Germany}, AUTHOR = {Matthieu Lê and Jan Unkelbach and Nicholas Ayache and Hervé Delingette}, BOOKTITLE = {MICCAI - Medical Image Computing and Computer Assisted Intervention - 2015}, EDITOR = {Alejandro F. Frangi and Joachim Hornegger and Nassir Navab and William M. Wells}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {38-46}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science - LNCS}, TITLE = {GPSSI: Gaussian Process for Sampling Segmentations of Images}, VOLUME = {9351}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-24574-4_5}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Sampling, Gaussian process, Radiotherapy, Segmentation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01155078/file/paper435.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01155078}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{mahe:hal-01208437, ADDRESS = {Munich, Germany}, AUTHOR = {Jessie Mahé and Nicolas Linard and Kohandani Tafreshi, Marzieh and Tom Vercauteren and Nicholas Ayache and Francois Lacombe and Remi Cuingnet}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2015}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {447-454}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Motion-Aware Mosaicing for Confocal Laser Endomicroscopy}, VOLUME = {9349}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-24553-9_55}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01208437/file/miccai2015_VideoMosaicing_cameraready.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01208437}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{mangado:hal-01213341, ADDRESS = {Barcelona, Spain}, AUTHOR = {Nerea Mangado and Mario Ceresa and Nicolas Duchateau and Hector Dejea and Hans Martin Kjer and Rasmus Paulsen and Sergio Vera and Pavel Mistrik and Javier Herrero and Gonzalez Ballester, Miguel Angel}, BOOKTITLE = {Computer Assisted Radiology and Surgery (CARS)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {S1}, OPTORGANIZATION = {}, PAGES = {S67-S68}, OPTPUBLISHER = {}, SERIES = {International Journal of Computer Assisted Radiology and Surgery}, TITLE = {Automatic generation of a computational model for monopolar stimulation of cochlear implants}, VOLUME = {10}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/s11548-015-1213-2}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01213341/file/cMangado_CARS_2015-01ok.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01213341}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{mangado:hal-01213345, ADDRESS = {Barcelona, Spain}, AUTHOR = {Nerea Mangado and Nicolas Duchateau and Mario Ceresa and Hans Martin Kjer and Sergio Vera and Pavel Mistrik and Javier Herrero and Gonzalez Ballester, Miguel Angel}, BOOKTITLE = {Computer Assisted Radiology and Surgery (CARS)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {S1}, OPTORGANIZATION = {}, PAGES = {S102-S103}, OPTPUBLISHER = {}, SERIES = {International Journal of Computer Assisted Radiology and Surgery}, TITLE = {Patient-specific virtual insertion of electrode array for electrical simulation of cochlear implants}, VOLUME = {10}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/s11548-015-1213-2}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01213345/file/cMangado_CARS_2015-02ok.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01213345}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{mcleod:hal-01205535, ADDRESS = {Munich, Germany}, AUTHOR = {Kristin Mcleod and Maxime Sermesant and Philipp Beerbaum and Xavier Pennec}, BOOKTITLE = {Medical Image Computing and Computer Assisted Intervention (MICCAI 2015)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {419-426}, OPTPUBLISHER = {}, SERIES = {Lecture notes in computer science (LNCS)}, TITLE = {Descriptive and Intuitive Population-Based Cardiac Motion Analysis via Sparsity Constrained Tensor Decomposition}, VOLUME = {9351}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-24574-4_50}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01205535/file/McLeod_CardiacMotionAnalysis_MICCAI2015.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01205535}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{miolane:hal-01203518, ADDRESS = {Munich, Germany}, AUTHOR = {Nina Miolane and Xavier Pennec}, BOOKTITLE = {MICCAI Workshop on Medical Computer Vision: Algorithms for Big Data. MCV 2015.}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {155-167}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {A survey of mathematical structures for extending 2D neurogeometry to 3D image processing}, VOLUME = {9601}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-42016-5_15}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {sub-Riemannian geometry, Image processing, neurogeometry}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01203518/file/Miolane_Pennec_MCV2015.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01203518}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{miolane:hal-01203805, ADDRESS = {Palaiseau, France}, AUTHOR = {Nina Miolane and Xavier Pennec}, BOOKTITLE = {Geometric Science of Information. Second International Conference, GSI 2015.}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {130-139}, PUBLISHER = {Springer}, SERIES = {Lecture notes in computer science (LNCS)}, TITLE = {Biased estimators on Quotient spaces}, VOLUME = {9389}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-25040-3_15}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01203805/file/Miolane_Pennec_GSI2015.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01203805}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{mollero:hal-01241896, ADDRESS = {Maastricht, Netherlands}, AUTHOR = {Roch Molléro and Dominik Neumann and Marc-Michel Rohé and Manasi Datar and Herve Lombaert and Nicholas Ayache and Dorin Comaniciu and Olivier Ecabert and Marcello Chinali and Gabriele Rinelli and Xavier Pennec and Maxime Sermesant and Tommaso Mansi}, BOOKTITLE = {Functional Imaging and Modeling of the Heart, LNCS.}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {448-456}, OPTPUBLISHER = {}, SERIES = {8th International Conference, FIMH 2015, Maastricht, The Netherlands, June 25-27, 2015. Proceedings}, TITLE = {Propagation of Myocardial Fibre Architecture Uncertainty on Electromechanical Model Parameter Estimation: A Case Study}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-20309-6_51}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01241896/file/FIMH2015_UncertaintyPropagation_camera_ready.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01241896}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{pennec:hal-01203815, ADDRESS = {Munich, Germany}, AUTHOR = {Xavier Pennec}, BOOKTITLE = {Mathematical Foundation sof Computational Anatomy (MFCA'15)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {71-82}, OPTPUBLISHER = {}, SERIES = {Proceedings of the fifth international workshop on Mathematical Foundation sof Computational Anatomy (MFCA'15)}, TITLE = {Barycentric Subspaces Analysis on Spheres}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01203815/file/MFCA15_2_3.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01203815}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{pennec:hal-01164463, ADDRESS = {Palaiseau, France}, AUTHOR = {Xavier Pennec}, BOOKTITLE = {Geometric Science of Information GSI'2015, Second International Conference}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {12-21}, OPTPUBLISHER = {}, SERIES = {Lecture Notes in Compuer Science}, TITLE = {Barycentric Subspaces and Affine Spans in Manifolds}, VOLUME = {9389}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-25040-3_2}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01164463/file/Pennec_AffineSpan_GSI2015.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01164463}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{rohe:hal-01206710, ADDRESS = {Munich, Germany}, AUTHOR = {Marc-Michel Rohé and Nicolas Duchateau and Maxime Sermesant and Xavier Pennec}, BOOKTITLE = {Statistical Atlases and Computational Models of the Heart. Imaging and Modelling Challenges. STACOM 2015.}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {190-198}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Combination of Polyaffine Transformations and Supervised Learning for the Automatic Diagnosis of LV Infarct}, VOLUME = {9534}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Medical Imaging, Cardiac Motion, Machine Learning}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01206710/file/STACOM_2015_final.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01206710}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{sanchezmartinez:hal-01208016, ADDRESS = {Maastricht, Netherlands}, AUTHOR = {Sergio Sanchez-Martinez and Nicolas Duchateau and Bart Bijnens and Tamás Erdei and Alan Fraser and Gemma Piella}, BOOKTITLE = {8th International Conference, FIMH 2015, Maastricht, The Netherlands, June 25-27, 2015. Proceedings}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {65-73}, OPTPUBLISHER = {}, SERIES = {Functional Imaging and Modeling of the Heart, LNCS}, TITLE = {Characterization of myocardial motion by multiple kernel learning: application to heart failure with preserved ejection fraction}, VOLUME = {9126}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-20309-6_8}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01208016/file/cSanchez_FIMH_2015_FINALok.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01208016}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{sanchezmartinez:hal-01217975, ADDRESS = {Seville, Spain}, AUTHOR = {Sergio Sanchez-Martinez and Nicolas Duchateau and Tamás Erdei and Alan Fraser and Gemma Piella and Bart Bijnens}, BOOKTITLE = {EuroEcho-Imaging}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {S2}, OPTORGANIZATION = {}, PAGES = {ii38-9}, OPTPUBLISHER = {}, SERIES = {European Heart Journal: Cardiovascular Imaging, Abstracts from the EuroEcho-Imaging congress}, TITLE = {Can machine learning help to identify heart failure with preserved ejection fraction?}, VOLUME = {16}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1093/ehjci/jev263}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01217975}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{sanchezmartinez:hal-01217993, ADDRESS = {Seville, Spain}, AUTHOR = {Sergio Sanchez-Martinez and Nicolas Duchateau and Tamás Erdei and Alan Fraser and Gemma Piella and Bart Bijnens}, BOOKTITLE = {EuroEcho-Imaging}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {S2}, OPTORGANIZATION = {}, PAGES = {ii234}, OPTPUBLISHER = {}, SERIES = {European Heart Journal: Cardiovascular Imaging, Abstracts from the EuroEcho-Imaging congress}, TITLE = {Quantifying the contribution of stress echocardiography to the diagnosis of heart failure with preserved ejection fraction}, VOLUME = {16}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1093/ehjci/jev271}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01217993}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{sotoiglesias:hal-01208006, ADDRESS = {Maastricht, Netherlands}, AUTHOR = {David Soto-Iglesias and Nicolas Duchateau and Constantine Butakoff and David Andreu and Juan Fernández-Armenta and Bart Bijnens and Antonio Berruezo and Marta Sitges and Oscar Camara}, BOOKTITLE = {FIMH: Functional Imaging and Modeling of the Heart}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, NUMBER = {9126}, OPTORGANIZATION = {}, PAGES = {74-82}, OPTPUBLISHER = {}, SERIES = {Functional Imaging and Modeling of the Heart}, TITLE = {Quantitative analysis of lead position vs. correction of electrical dyssynchrony in an experimental model of LBBB/CRT}, VOLUME = {LNCS}, YEAR = {2015}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-20309-6_9}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01208006/file/cSoto_FIMH_2015_FINALok.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01208006}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{talbot:hal-01195719, ADDRESS = {Barcelona, Spain}, AUTHOR = {Hugo Talbot and Stephane Cotin and Reza Razavi and Christopher Rinaldi and Hervé Delingette}, BOOKTITLE = {Computer Assisted Radiology and Surgery (CARS 2015)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Personalization of Cardiac Electrophysiology Model using the Unscented Kalman Filtering}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01195719/file/CARS2015-HTalbot.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01195719}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{talbot:hal-01160297, ADDRESS = {Zurich, Switzerland}, AUTHOR = {Hugo Talbot and Nazim Haouchine and Igor Peterlik and Jeremie Dequidt and Christian Duriez and Hervé Delingette and Stephane Cotin}, BOOKTITLE = {Eurographics}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Surgery Training, Planning and Guidance Using the SOFA Framework}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01160297/file/Sofa-EG2015.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01160297}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{vemuri:hal-01203463, ADDRESS = {Munich, Germany}, AUTHOR = {Anant S. Vemuri and Stéphane Nicolau and Jacques Marescaux and Luc Soler and Nicholas Ayache}, BOOKTITLE = {Medical Content-based Retrieval for Clinical Decision Support}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {Tanveer Syeda-Mahmood and Hayit Greenspan and Anant Madabhushi}, PAGES = {1-8}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Automatic View-Point Selection for Inter-Operative Endoscopic Surveillance}, OPTVOLUME = {}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Computer assisted intervention, Endoscopic Image classification, Endoluminal surgery, Barrett's Oesophagus}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01203463/file/anant_MCBR_2015_compressed.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01203463}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{alessandrini:hal-01095790, ADDRESS = {Chicago, United States}, AUTHOR = {Martino Alessandrini and Brecht Heyde and Szymon Cygan and Maxime Sermesant and Hervé Delingette and Olivier Bernard and De Craene and Jan d'Hooge}, BOOKTITLE = {IEEE International Ultrasonics Symposium}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {608 - 611}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Elastic registration vs. block matching for quantification of cardiac function with 3D ultrasound: Initial results of a direct comparison in silico based on a new evaluation pipeline}, OPTVOLUME = {}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1109/ULTSYM.2014.0149}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01095790/file/radD71C8.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01095790}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{audigier:hal-01067709, ADDRESS = {Boston, United States}, AUTHOR = {Chloé Audigier and Tommaso Mansi and Hervé Delingette and Saikiran Rapaka and Viorel Mihalef and Daniel Carnegie and Emad Boctor and Michael Choti and Ali Kamen and Dorin Comaniciu and Nicholas Ayache}, BOOKTITLE = {MICCAI Workshop on Abdominal Imaging -- Computational and Clinical Applications}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Parameter Estimation For Personalization of Liver Tumor Radiofrequency Ablation}, OPTVOLUME = {}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01067709/file/paper.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01067709}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{cabreralozoya:hal-01069085, ADDRESS = {Boston, United States}, AUTHOR = {Cabrera Lozoya, Rocio and Jan Margeta and Le Folgoc, Loic and Yuki Komatsu and Berte Benjamin and Jatin Relan and Hubert Cochet and Michel Haïssaguerre and Pierre Jais and Nicholas Ayache and Maxime Sermesant}, BOOKTITLE = {bigMCV Workshop MICCAI 2014}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Confidence-based Training for Clinical Data Uncertainty in Image-based Prediction of Cardiac Ablation Targets}, OPTVOLUME = {}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01069085/file/RCL_miccai2014.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01069085}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{darmante:hal-01094711, ADDRESS = {Paris, France}, AUTHOR = {Hugo Darmanté and Benoit Bugnas and Regis Bernard De Dompsure and Laurent Barresi and Nina Miolane and Xavier Pennec and de Peretti, Fernand and Nicolas Bronsard}, BOOKTITLE = {89e Réunion annuelle de la SOFCOT}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, NUMBER = {7}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, SERIES = {Revue de Chirurgie Orthopédique et Traumatologique}, TITLE = {Analyse biométrique de l'anneau pelvien en 3 dimensions - à propos de 100 scanners}, VOLUME = {100}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1016/j.rcot.2014.09.076}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01094711}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{giffardroisin:hal-01087841, ADDRESS = {Boston, United States}, AUTHOR = {Sophie Giffard-Roisin and Stéphanie Marchesseau and Le Folgoc, Loic and Hervé Delingette and Maxime Sermesant}, BOOKTITLE = {Proceedings of the 5th international STACOM workshop (Boston, September 18, 2014)}, EDITOR = {O. Camara and T. Mansi and M. Pop and K. Rhode and M. Sermesant and A. Young}, MONTH = {September}, OPTNOTE = {}, NUMBER = {8896}, ORGANIZATION = {Pop M.}, PAGES = {74-82}, PUBLISHER = {Springer}, SERIES = {5th International Workshop, STACOM 2014, Held in Conjunction with MICCAI 2014, Boston, MA, USA, September 18, 2014, Revised Selected Papers}, TITLE = {Evaluation of Personalised Canine Electromechanical Models}, OPTVOLUME = {}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-14678-2_8}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac Modelling, Mechanical modeling, Modelling and Simulation, Personalised modelling, Personalized modeling, Cardiac electrical activity, Cardiac Modeling, Cardiac Electrophysiology modeling, Cardiac Electrophisiology, Modelisation cardiaque}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01087841/file/miccaiPaper.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01087841}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{gori:hal-01010702, ADDRESS = {Boston, United States}, AUTHOR = {Pietro Gori and Olivier Colliot and Linda Marrakchi-Kacem and Yulia Worbe and de Vico Fallani, Fabrizio and Mario Chavez and Sophie Lecomte and Cyril Poupon and Andreas Hartmann and Nicholas Ayache and Stanley Durrleman}, BOOKTITLE = {MICCAI 2014 - 17th International Conference on Medical Image Computing and Computer Assisted Intervention}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A Prototype Representation to Approximate White Matter Bundles with Weighted Currents}, OPTVOLUME = {}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01010702/file/paper466_MICCAI2014.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01010702}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{khanal:hal-01006478, ADDRESS = {Boston, United States}, AUTHOR = {Bishesh Khanal and Marco Lorenzi and Nicholas Ayache and Xavier Pennec}, BOOKTITLE = {MICCAI 2014 - 17th International Conference Medical Image Computing and Computer-Assisted Intervention}, EDITOR = {P. GOLLAND and N. HATA and C. BARILLOT and J. HORNEGGER and R. HOWE}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {41-48}, PUBLISHER = {Springer}, SERIES = {LNCS - Lecture Notes in Computer Science, Springer}, TITLE = {A Biophysical Model of Shape Changes due to Atrophy in the Brain with Alzheimer's Disease}, VOLUME = {8674}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-10470-6_6}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Alzheimer's disease, Biophysical model, Atrophy model, Atrophy simulation, Longitudinal modeling}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01006478/file/Khanal2014_MiccaiFinalSubmitted.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01006478}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{kohandanitafreshi:hal-01010765, ADDRESS = {Chicago, United States}, AUTHOR = {Kohandani Tafreshi, Marzieh and Virendra Joshi and Alexander Meining and Charles Lightdale and Marc Giovannini and Julien Dauguet and Nicholas Ayache and Barbara André}, BOOKTITLE = {Digestive Disease Week (DDW 2014)}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Smart Atlas for Supporting the Interpretation of probe-based Confocal Laser Endomicroscopy (pCLE) of Biliary Strictures: First Classification Results of a Computer-Aided Diagnosis Software based on Image Recognition}, OPTVOLUME = {}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01010765/file/DDW-ASGE-Abstract-BiliaryStrictures.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01010765}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{kohandanitafreshi:hal-01010762, ADDRESS = {Chicago, United States}, AUTHOR = {Kohandani Tafreshi, Marzieh and Yan-Qing Li and Rapat Pittayanon and Douglas Pleskow and Virendra Joshi and Philip Chiu and Julien Dauguet and Nicholas Ayache and Barbara André}, BOOKTITLE = {Digestive Disease Week (DDW 2014)}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Smart Atlas for Supporting the Interpretation of probe-based Confocal Laser Endomicroscopy (pCLE) of Gastric Lesions: First Classification Results of a Computer-Aided Diagnosis Software based on Image Recognition}, OPTVOLUME = {}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01010762/file/DDW-ASGE-Abstract-GastricLesions.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01010762}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{kohandanitafreshi:hal-01010673, ADDRESS = {Boston, United States}, AUTHOR = {Kohandani Tafreshi, Marzieh and Nicolas Linard and Barbara André and Nicholas Ayache and Tom Vercauteren}, BOOKTITLE = {Medical Image Computing and Computer Assisted Intervention (MICCAI)}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Semi-automated Query Construction for Content-based Endomicroscopy Video Retrieval}, OPTVOLUME = {}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Microscopic imaging, Biological Imaging, Abdominal imaging, Optical imaging, Machine learning, Database retrieval and data mining, Computer vision, Minimally invasive procedure, Pathology, Intraoperative imaging, Endoscopic imaging}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01010673/file/paper-841.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01010673}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{kohandanitafreshi:hal-01010701, ADDRESS = {Chicago, United States}, AUTHOR = {Kohandani Tafreshi, Marzieh and Bertrand Napoléon and Anne-Isabelle Lemaistre and Marc Giovannini and Virendra Joshi and Julien Dauguet and Nicholas Ayache and Barbara André}, BOOKTITLE = {Digestive Disease Week (DDW 2014)}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Smart Atlas for Supporting the Interpretation of needle-based Confocal Laser Endomicroscopy (nCLE) of Pancreatic Cysts: First Classification Results of a Computer-Aided Diagnosis Software based on Image Recognition}, OPTVOLUME = {}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01010701/file/DDW-ASGE-Abstract-PancreaticCysts.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01010701}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{lefolgoc:hal-01006605, ADDRESS = {Boston, United States}, AUTHOR = {Le Folgoc, Loic and Hervé Delingette and Antonio Criminisi and Nicholas Ayache}, BOOKTITLE = {MICCAI - 17th International Conference on Medical Image Computing and Computer Assisted Intervention}, EDITOR = {Polina Golland and Nobuhiko Hata and Christian Barillot and Joachim Hornegger and Robert Howe}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {235-242}, PUBLISHER = {Springer}, SERIES = {LNCS - Lecture Notes in Computer Science, Springer}, TITLE = {Sparse Bayesian Registration}, VOLUME = {8673}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-10404-1_30}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Sparse, Bayesian, Registration, Automatic Relevance Determination, MRI}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01006605/file/paper945.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01006605}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{lombaert:hal-01009672, ADDRESS = {Boston, United States}, AUTHOR = {Herve Lombaert and Darko Zikic and Antonio Criminisi and Nicholas Ayache}, BOOKTITLE = {MICCAI 2014 - 17th International Conference Medical Image Computing and Computer-Assisted Intervention}, EDITOR = {Polina Golland and Nobuhiko Hata and Christian Barillot and Joachim Hornegger and Robert Howe}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {LNCS - Lecture Notes in Computer Science}, TITLE = {Laplacian Forests: Semantic Image Segmentation by Guided Bagging}, VOLUME = {8674}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-10470-6_62}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01009672/file/MICCAI-LaplacianForest.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01009672}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{lorenzi:hal-01015978, ADDRESS = {Copenhagen, Denmark}, AUTHOR = {Marco Lorenzi and Xavier Pennec and Nicholas Ayache and For The Alzheimer'S Disease Neuroimaging Initiative, (adni)}, BOOKTITLE = {Alzheimer's Association International Conference}, OPTEDITOR = {}, MONTH = {July}, NOTE = {Oral podium presentation}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Regional flux analysis of longitudinal atrophy in Alzheimer's disease}, OPTVOLUME = {}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01015978}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{le:hal-01093397, ADDRESS = {Boston, United States}, AUTHOR = {Matthieu Lê and Hervé Delingette and Jayashree Kalpathy-Cramer and Elisabeth Gerstner and Helen A. Shih and Tracy Batchelor and Jan Unkelbach and Nicholas Ayache}, BOOKTITLE = {Workshop Image-Guided Adaptive Radiation Therapy}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Multimodal Analysis of Vasogenic Edema in Glioblastoma Patients for Radiotherapy Planning}, OPTVOLUME = {}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01093397/file/mle_IGART_camera_ready.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01093397}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{margeta:hal-01009952, ADDRESS = {London, United Kingdom}, AUTHOR = {Jan Margeta and Antonio Criminisi and Daniel C. Lee and Nicholas Ayache}, BOOKTITLE = {MIUA - Medical Image Understanding and Analysis Conference - 2014}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {Reyes-Aldasoro, Constantino Carlos and Slabaugh, Gregory}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Recognizing cardiac magnetic resonance acquisition planes}, OPTVOLUME = {}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {random forests, cardiac MR}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01009952/file/view_recognition.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01009952}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{miolane:hal-01091515, ADDRESS = {Amboise, France}, AUTHOR = {Nina Miolane and Xavier Pennec}, BOOKTITLE = {Bayesian inference and Maximum Entropy Methods in Science and Engineering (MaxEnt 2014)}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {59--66}, PUBLISHER = {AIP Proceedings}, SERIES = {AIP Conference Proceedings}, TITLE = {Statistics on Lie groups : a need to go beyond the pseudo-Riemannian framework}, VOLUME = {1641}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1063/1.4905963}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {manifold, metric, exponential barycenter, Lie group, computational anatomy, Statistics, pseudo-Riemannian}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01091515/file/69_paper.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01091515}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{talbot:hal-01078209, ADDRESS = {Strabsourg, France}, AUTHOR = {H Talbot and F Spadoni and Christian Duriez and M Sermesant and Stéphane Cotin and Hervé Delingette}, BOOKTITLE = {6th International Symposium on Biomedical Simulation - ISBMS 2014}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {11 - 19}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Interactive Training System for Interventional Electrocardiology Procedures}, OPTVOLUME = {}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-12057-7_2}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Electrophysiology, Radio-Frequency Ablation, Arrhythmia, Training System}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01078209/file/HugoTalbot-ISBMS2014.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01078209}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{vemuri:hal-01089196, ADDRESS = {Chambéry, France}, AUTHOR = {Anant S. Vemuri and Adrien Sportes and Stéphane Nicolau and Jacques Marescaux and Nicholas Ayache and Luc Soler}, BOOKTITLE = {Proceedings of Surgetica'2014 : Computer-Assisted Medical Interventions: scientific problems, tools and clinical applications}, OPTEDITOR = {}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {Jocelyne TROCCAZ}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Video Synchronization: An Approach to Biopsy Site Re-localization}, OPTVOLUME = {}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Inter operative Relocalization, Endoluminal surgery, Endoscopy}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01089196/file/Anant_Vemuri_IHU.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01089196}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{decraene:hal-01095133, ADDRESS = {Beijing, China}, AUTHOR = {de Craene, Mathieu and Martino Alessandrini and Pascal Allain and Stephanie Marchesseau and I Waechter-Stehle and J Weese and E Saloux and H. G. Morales and R Cuingnet and Hervé Delingette and M Sermesant and Olivier Bernard and D 'Hooge, J}, BOOKTITLE = {Biomedical Imaging (ISBI), 2014 IEEE 11th International Symposium on}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {73 - 76}, PUBLISHER = {IEEE}, OPTSERIES = {}, TITLE = {Generation of ultra-realistic synthetic echocardiographic sequences}, OPTVOLUME = {}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.1109/ISBI.2014.6867812}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Ultra-sound imaging, Motion detection and tracking, Modeling of image formation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01095133/file/IsbiSyrus.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01095133}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{audigier:hal-00804147, ADDRESS = {Nagoya, Japan}, AUTHOR = {Chloé Audigier and Tommaso Mansi and Hervé Delingette and Saikiran Rapaka and Viorel Mihalef and Puneet Sharma and Ali Kamen and Daniel Carnegie and Emad Boctor and Michael Choti and Dorin Comaniciu and Nicholas Ayache}, BOOKTITLE = {MICCAI - Medical Image Computing and Computer Assisted Intervention - 2013}, EDITOR = {Kensaku Mori and Ichiro Sakuma and Yoshinobu Sato and Christian Barillot and Nassir Navab}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {323-330}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science - LNCS}, TITLE = {Lattice Boltzmann Method For Fast Patient-Specific Simulation of Liver Tumor Ablation from CT Images}, VOLUME = {8151}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-40760-4_41}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00804147v2/file/paper.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00804147}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{benseghir:hal-00833196, ADDRESS = {Nagoya, Japan}, AUTHOR = {Thomas Benseghir and Grégoire Malandain and Régis Vaillant}, BOOKTITLE = {MICCAI - Medical Image Computing and Computer Assisted Intervention}, EDITOR = { Mori and Kensaku and Sakuma and Ichiro and Sato and Yoshinobu and Barillot and Christian and Navab and Nassir}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {179-186}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Iterative Closest Curve: a Framework for Curvilinear Structure Registration Application to 2D/3D Coronary Arteries Registration}, VOLUME = {8149}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-40811-3_23}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, curvilinear structure, ICP, chronic total occlusion, CTO, coronary, X-ray, computed tomography angiography, CTA}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-00833196/file/paper974.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-00833196}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{breuilly:hal-00799368, ADDRESS = {San Francisco, United States}, AUTHOR = {Marine Breuilly and Grégoire Malandain and Nicholas Ayache and Julien Guglielmi and Thierry Pourcher and Philippe R. Franken and Jacques Darcourt}, BOOKTITLE = {ISBI - International Symposium on Biomedical Imaging}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {792-795}, PUBLISHER = {IEEE}, SERIES = {Proceedings of the 2013 IEEE 10th International Symposium on Biomedical Imaging: From Nano to Macro}, TITLE = {Image-based motion detection in 4D images and application to respiratory motion suppression}, OPTVOLUME = {}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1109/ISBI.2013.6556597}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00799368/file/Breuilly_ISBI_13.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00799368}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{cordier:hal-00917084, ADDRESS = {Nagoya, Japan}, AUTHOR = {Nicolas Cordier and Bjoern Menze and Hervé Delingette and Nicholas Ayache}, BOOKTITLE = {MICCAI Challenge on Multimodal Brain Tumor Segmentation}, EDITOR = {Bjoern Menze and Mauricio Reyes and Andras Jakab and Elisabeth Gerstner and Justin Kirby and Keyvan Farahani}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {6 - 17}, PUBLISHER = {IEEE}, SERIES = {Proceedings of the MICCAI Challenge on Multimodal Brain Tumor Image Segmentation (BRATS) 2013}, TITLE = {Patch-based Segmentation of Brain Tissues}, OPTVOLUME = {}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00917084/file/Cordier-MICCAI-2013-Challenge.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00917084}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{dittmann:hal-00912667, ADDRESS = {Nagoya, Japan}, AUTHOR = {Florian Dittmann and Bjoern Menze and Ender Konukoglu and Jan Unkelbach}, BOOKTITLE = {Multimodal Brain Image Analysis}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {63-73}, OPTPUBLISHER = {}, SERIES = {Lecture Notes in Computer Scienc}, TITLE = {Use of Diffusion Tensor Images in Glioma Growth Modeling for Radiotherapy Target Delineation}, VOLUME = {8159}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/978-3-319-02126-3_7}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00912667/file/MBIA-Florian-13.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00912667}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{geremia:hal-00840035, ADDRESS = {San Francisco, CA, United States}, AUTHOR = {Ezequiel Geremia and Bjoern H. Menze and Nicholas Ayache}, BOOKTITLE = {2013 IEEE International Symposium on Biomedical Imaging: From Nano to Macro}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1332-35}, PUBLISHER = {IEEE}, OPTSERIES = {}, TITLE = {Spatially Adaptive Random Forest}, OPTVOLUME = {}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1109/ISBI.2013.6556781}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00840035/file/Geremia_ISBI_2013.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00840035}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{gori:hal-01188791, ADDRESS = {Nagoya, Japan}, AUTHOR = {Pietro Gori and Olivier Colliot and Yulia Worbe and Linda Marrakchi-Kacem and Sophie Lecomte and Cyril Poupon and Andreas Hartmann and Nicholas Ayache and Stanley Durrleman}, BOOKTITLE = {MICCAI 2013 : Medical Image Computing and Computer Assisted Intervention}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {267-274}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Bayesian Atlas Estimation for the Variability Analysis of Shape Complexes}, OPTVOLUME = {}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-40811-3_34}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01188791/file/MICCAI2013_GORI.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01188791}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{gori:hal-00816138, ADDRESS = {Seattle, United States}, AUTHOR = {Pietro Gori and Olivier Colliot and Yulia Worbe and Linda Marrakchi-Kacem and Sophie Lecomte and Cyril Poupon and Andreas Hartmann and Nicholas Ayache and Stanley Durrleman}, BOOKTITLE = {Human Brain Mapping}, OPTEDITOR = {}, OPTMONTH = {}, NOTE = {Organization for Human Brain Mapping 2013}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Towards joint morphometry of white matter tracts and gray matter surfaces}, OPTVOLUME = {}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00816138/file/HBM_2013.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00816138}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{gupta:hal-00845927, ADDRESS = {Nagoya, Japan}, AUTHOR = {Vikash Gupta and Nicholas Ayache and Xavier Pennec}, BOOKTITLE = {Proceedings of Medical Image Computing and Computer Assisted Intervention 2013 (MICCAI)}, EDITOR = {Kensaku Mori and Ichiro Sakuma and Yoshinobu Sato and Christian Barillot and Nassir Navab}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {477-484}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science - LNCS}, TITLE = {Improving DTI Resolution from a Single Clinical Acquisition: A Statistical Approach using Spatial Prior}, VOLUME = {8151}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-40760-4_60}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {DTI, Super-resolution, Partial volume effect, Diffusion Tensor Imaging, Clinical Medical Imaging}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00845927/file/paper504.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00845927}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{lorenzi:hal-00874722, ADDRESS = {Boston, United States}, AUTHOR = {Marco Lorenzi and Martina Bochetta and Nicholas Ayache and Xavier Pennec and Giovanni B. Frisoni}, BOOKTITLE = {Alzheimer's Association International Conference 2013}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {P596}, OPTPUBLISHER = {}, SERIES = {Alzheimer's & Dementia: The Journal of the Alzheimer's Association}, TITLE = {Conversion to MCI in healthy individuals with abnormal CSF Ab42 levels is associated with specific longitudinal morphological changes}, VOLUME = {9, issue 4 (supplement)}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1016/j.jalz.2013.05.1189}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00874722}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{lorenzi:hal-00845758, ADDRESS = {Nagoya, Japan}, AUTHOR = {Marco Lorenzi and Bjoern H. Menze and Marc Niethammer and Nicholas Ayache and Xavier Pennec}, BOOKTITLE = {Medical Image Computing and Computer Aided Intervention (MICCAI)}, EDITOR = {Kensaku Mori and Ichiro Sakuma and Yoshinobu Sato and Christian Barillot and Nassir Navab}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {328-335}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science - LNCS}, TITLE = {Sparse Scale-Space Decomposition of Volume Changes in Deformations Fields}, VOLUME = {8150}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-40763-5_41}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Scale-space decomposition, non-rigid registration, longitudinal analysis, stationary velocity fields}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00845758/file/Submission562.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00845758}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{lorenzi:hal-00819898, ADDRESS = {Paris, France}, AUTHOR = {Marco Lorenzi and Xavier Pennec}, BOOKTITLE = {GSI2013 - Geometric Science of Information}, EDITOR = { Nielsen and Frank and Barbaresco and F.}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {68-75}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science - LNCS}, TITLE = {Parallel Transport with Pole Ladder: Application to Deformations of time Series of Images}, VOLUME = {8085}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-40020-9_6}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00819898/file/0069_MarcoLorenzi.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00819898}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{margeta:hal-00860580, ADDRESS = {Nagoya, Japan}, AUTHOR = {Jan Margeta and Kristin Mcleod and Antonio Criminisi and Nicholas Ayache}, BOOKTITLE = {4th International Workshop on Statistical Atlases and Computational Models of the Heart}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Decision forests for segmentation of left atrium from 3D MRI}, OPTVOLUME = {}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00860580}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{mcleod:hal-00840041, ADDRESS = {Nagoya, Japan}, AUTHOR = {Kristin Mcleod and Christof Seiler and Maxime Sermesant and Xavier Pennec}, BOOKTITLE = {MICCAI - Medical Image Computing and Computer Assisted Intervention - 2013}, EDITOR = {Kensaku Mori and Ichiro Sakuma and Yoshinobu Sato and Christian Barillot and Nassir Navab}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {501-508}, PUBLISHER = {Springer, Heidelberg}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Spatio-Temporal Dimension Reduction of Cardiac Motion for Group-Wise Analysis and Statistical Testing}, VOLUME = {8150}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-40763-5_62}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00840041/file/MICCAI_mcleod_2013.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00840041}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{mcleod:hal-00840042, ADDRESS = {London, United Kingdom}, AUTHOR = {Kristin Mcleod and Christof Seiler and Nicolas Toussaint and Maxime Sermesant and Xavier Pennec}, BOOKTITLE = {Functional Imaging and Modeling of the Heart 2013 (FIMH)}, EDITOR = {Sébastien Ourselin and Daniel Rueckert and Nicolas Smith}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {483-490}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Regional Analysis of Left Ventricle Function using a Cardiac-Specific Polyaffine Motion Model}, VOLUME = {7945}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-38899-6_57}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00840042/file/PolyAffineHeartRegionalAnalysis.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00840042}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{mhiri:hal-01104410, ADDRESS = {Batumi, Georgia}, AUTHOR = {Mariem Mhiri and Vineeth Varma and Maël Le and Samson Lasaulce and Abdelaziz Samet}, BOOKTITLE = {BlackSeaCom 2013}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {On the benefits of repeated game models for green cross-layer power control in small cells}, OPTVOLUME = {}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {channel state information, repeated game, energy efficiency, Index Terms-distributed power control, channel state information}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://centralesupelec.hal.science/hal-01104410/file/Blackseacom_RG%20power%20control%20%281%29.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://centralesupelec.hal.science/hal-01104410}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{pennec:hal-00846373, ADDRESS = {Paris, France}, AUTHOR = {Xavier Pennec}, BOOKTITLE = {Geometric Science of Information (GSI 2013)}, EDITOR = { Nielsen and Frank and Barbaresco and F.}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {59-67}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science - LNCS}, TITLE = {Bi-invariant means on Lie groups with Cartan-Schouten connections}, VOLUME = {8085}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-40020-9_5}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00846373/file/GSI13_CartanConnections.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00846373}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{seiler:hal-00847185, ADDRESS = {Paris, France}, AUTHOR = {Christof Seiler and Xavier Pennec and Susan Holmes}, BOOKTITLE = {GSI - Geometric Science of Information - 2013}, OPTEDITOR = {}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {120-127}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science - LNCS}, TITLE = {Random Spatial Structure of Geometric Deformations and Bayesian Nonparametrics}, VOLUME = {8085}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-40020-9_12}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00847185/file/BayesianNonparametricsGeometricDeformationsSeiler2013.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00847185}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{somphone:hal-00840038, ADDRESS = {San Francisco, United States}, AUTHOR = {Oudom Somphone and de Craene, Mathieu and Roberto Ardon and Benoit Mory and Pascal Allain and Hang Gao and Jan d'Hooge and Stéphanie Marchesseau and Maxime Sermesant and Eric Saloux}, BOOKTITLE = {International Symposium on Biomedical Imaging (ISBI), 2013}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1182-1185}, PUBLISHER = {IEEE}, OPTSERIES = {}, TITLE = {Fast Myocardial Motion and Strain Estimation in 3D Cardiac Ultrasound with Sparse Demons}, OPTVOLUME = {}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1109/ISBI.2013.6556691}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00840038}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{stretton:hal-00840036, ADDRESS = {San Francisco, CA, United States}, AUTHOR = {Erin Stretton and Ezequiel Geremia and Bjoern H. Menze and Hervé Delingette and Nicholas Ayache}, BOOKTITLE = {2013 IEEE International Symposium on Biomedical Imaging: From Nano to Macro}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1130-32}, PUBLISHER = {IEEE}, OPTSERIES = {}, TITLE = {Importance of patient DTI's to accurately model glioma growth using the reaction diffusion equation}, OPTVOLUME = {}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00840036/file/Stretton_ISBI_2013.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00840036}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{tarabalka:hal-00856634, ADDRESS = {Bristol, United Kingdom}, AUTHOR = {Yuliya Tarabalka and Guillaume Charpiat and Ludovic Brucker and Bjoern H. Menze}, BOOKTITLE = {BMVC - British Machine Vision Conference}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Enforcing Monotonous Shape Growth or Shrinkage in Video Segmentation}, OPTVOLUME = {}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00856634/file/2013_BMVC_TarabalkaEtAl.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00856634}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{tunc:hal-00846431, ADDRESS = {Asilomar, United States}, AUTHOR = {Birkan Tunç and Alex Smith and Demian Wasserman and Xavier Pennec and William M. Wells and Ragini Verma and Kilian M. Pohl}, BOOKTITLE = {IPMI 2013 - Information Processing in Medical Imaging}, EDITOR = { Gee and J. C. and Joshi and Sarang and Pohl and Kilian M. and Wells and William M. and Zollei and L.}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {730-741}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Multinomial Probabilistic Fiber Representation for Connectivity Driven Clustering}, VOLUME = {7917}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-38868-2_61}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00846431/file/tunc-ipmi-2013.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00846431}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{vemuri:hal-00841712, ADDRESS = {Nagoya, Japan}, AUTHOR = {Anant S. Vemuri and Stéphane Nicolau and Nicholas Ayache and Jacques Marescaux and Luc Soler}, BOOKTITLE = {International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI)}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {372-379}, PUBLISHER = {Springer}, SERIES = {Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013}, TITLE = {Inter-Operative Trajectory Registration for Endoluminal Video Synchronization: Application to Biopsy Site Re-localization}, VOLUME = {8149}, YEAR = {2013}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-40811-3_47}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Computer assisted surgery, Surgical Navigation, Biopsy relocalization}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00841712/file/anant_miccai13.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00841712}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{BouSleimanSeiler:MICCAI:12, OPTADDRESS = {}, AUTHOR = {H. Bou-Sleiman and Christof Seiler and T. Iizuka and L. Nolte and Mauricio Reyes}, BOOKTITLE = {Proceedings of Medical Image Computing and Computer Assisted Intervention 2012 (MICCAI)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {66--73}, PUBLISHER = {Springer, Heidelberg}, SERIES = {LNCS}, TITLE = {Population-Based Design of Mandibular Plates Based on Bone Quality and Morphology}, VOLUME = {7510}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {CH}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813819}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{DeCraene:cMAC2, OPTADDRESS = {}, AUTHOR = {De Craene, Mathieu and Pascal Allain and Hang Gao and Adityo Prakosa and Stéphanie Marchesseau and Loic Hilpert and Oudom Somphone and Hervé Delingette and Sherif Makram-Ebeid and Nicolas Villain and Jan D'hooge and Maxime Sermesant and Eric Saloux}, BOOKTITLE = {Proc. MICCAI Workshop on Statistical Atlases and Computational Models of the Heart: Imaging and Modelling Challenge (STACOM12)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Synthetic and Phantom Setups for the Second cardiac Motion Analysis Challenge (cMAC2)}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Duchateau:STIA:12, OPTADDRESS = {}, AUTHOR = {Nicolas Duchateau and De Craene, Mathieu and Xavier Pennec and Beatriz Merino and Marta Sitges and Bart Bijnens}, BOOKTITLE = {Proc. of STIA 2012 (Spatio-=Temporal Image Analysis for Longitudinal and Time-Series Image Data}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {25-37}, PUBLISHER = {Springer, Heidelberg}, SERIES = {LNCS}, TITLE = {Which Reorientation Framework for the Atlas-Based Comparison of Motion from Cardiac Image Sequences?}, VOLUME = {7570}, YEAR = {2012}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-33555-6_3}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {SP}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813822}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Geremia:BRATS:12, OPTADDRESS = {}, AUTHOR = {Ezequiel Geremia and Bjoern H. Menze and Nicholas Ayache}, BOOKTITLE = {MICCAI Challenge on Multimodal Brain Tumor Segmentation}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Spatial Decision Forests for Glioma Segmentation in Multi-Channel MR Images}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Ezequiel.Geremia/Geremia-BRATS-2012.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813827}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Geremia:MCV:12, OPTADDRESS = {}, AUTHOR = {Ezequiel Geremia and Bjoern H. Menze and Marcel Prastawa and Marc-André Weber and Antonio Criminisi and Nicholas Ayache}, BOOKTITLE = {MICCAI Workshop on Medical Computer Vision}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Brain tumor cell density estimation from multi-modal MR images based on a synthetic tumor growth model}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Ezequiel.Geremia/Geremia-MCV-2012.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813828}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Le_Folgoc:MCV:12, OPTADDRESS = {}, AUTHOR = {Le Folgoc, Loic and Hervé Delingette and Antonio Criminisi and Nicholas Ayache}, BOOKTITLE = {Proceedings of MCV Workshop at MICCAI 2012}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Current-based 4D shape analysis for the mechanical personalization of heart models}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Loic.Le_Folgoc/LL_MCV2012.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00746740}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Lombaert:ECCV:12, OPTADDRESS = {}, AUTHOR = {Hervé Lombaert and Leo Grady and Xavier Pennec and Nicholas Ayache and Farida Cheriet}, BOOKTITLE = {Proc. of ECCV (2)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {7573}, OPTORGANIZATION = {}, PAGES = {30-44}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Spectral Demons - Image Registration via Global Spectral Correspondence}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-33709-3_3}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {US}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813833}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Lombaert:MCV:12, OPTADDRESS = {}, AUTHOR = {Hervé Lombaert and Leo Grady and Xavier Pennec and Jean-Marc Peyrat and Nicholas Ayache and Farida Cheriet}, BOOKTITLE = {Medical Computer Vision (MCV'12) MICCAI workshop}, OPTEDITOR = {}, OPTMONTH = {}, NOTE = {Best paper award}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Groupwise Spectral Log-Demons Framework for Atlas Construction}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://step.polymtl.ca/~rv101/ECCV-Spectral-Demons.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {US}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813834}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Lorenzi:NIBAD:12, OPTADDRESS = {}, AUTHOR = {Marco Lorenzi and Nicholas Ayache and Xavier Pennec}, BOOKTITLE = {MICCAI workshop on Novel Imaging Biomarkers for Alzheimer's Disease and Related Disorders (NIBAD'12)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {145-154}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Disentangling the normal aging from the pathological Alzheimer's disease progression on cross-sectional structural MR images}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, ISBN = {9781479261994}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Marco.Lorenzi/Lorenzi-NIBAD2012.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {IT}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813836}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Lorenzi:MICCAI:12, OPTADDRESS = {}, AUTHOR = {Marco Lorenzi and Nicholas Ayache and Xavier Pennec}, BOOKTITLE = {Proceedings of Medical Image Computing and Computer Assisted Intervention 2012 (MICCAI)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {739--746}, PUBLISHER = {Springer, Heidelberg}, SERIES = {LNCS}, TITLE = {Regional flux analysis of longitudinal atrophy in Alzheimer's disease}, VOLUME = {7510}, YEAR = {2012}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-33415-3_91}, ISBN = {978-3-642-33414-6}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Marco.Lorenzi/RegionalFluxAnalysis.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {IT}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813837}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Lorenzi:NIBAD-ch:12, OPTADDRESS = {}, AUTHOR = {Marco Lorenzi and Giovanni B. Frisoni and Nicholas Ayache and Xavier Pennec}, BOOKTITLE = {MICCAI workshop on Novel Imaging Biomarkers for Alzheimer's Disease and Related Disorders (NIBAD'12)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {256-265}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Probabilistic Flux Analysis of Cerebral Longitudinal Atrophy}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, ISBN = {9781479261994}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {IT}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813846}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Marchesseau:MICCAI:2012, OPTADDRESS = {}, AUTHOR = {Stéphanie Marchesseau and Hervé Delingette and Maxime Sermesant and Kawal Rhode and S.G. Duckett and C. Aldo Rinaldi and Reza Razavi and Nicholas Ayache}, BOOKTITLE = {Proceedings of Medical Image Computing and Computer Assisted Intervention 2012 (MICCAI)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer, Heidelberg}, SERIES = {LNCS}, TITLE = {Cardiac Mechanical Parameter Calibration based on the Unscented Transform}, VOLUME = {7511}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Stephanie.Marchesseau/MICCAI-2012-Marchesseau.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813848}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{McLeod:STACOM:2011, ADDRESS = {Toronto}, AUTHOR = {Kristin McLeod and Adityo Prakosa and Tommaso Mansi and Maxime Sermesant and Xavier Pennec}, BOOKTITLE = {Proc. MICCAI Workshop on Statistical Atlases and Computational Models of the Heart: Mapping Structure and Function (STACOM11)}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, NUMBER = {7085}, OPTORGANIZATION = {}, PAGES = {55-67}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {An Incompressible Log-Domain Demons Algorithm for Tracking Heart Tissue}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-28326-0_6}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Kristin.McLeod/iLogDemons.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813851}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{MCLEOD:STACOM:2012, ADDRESS = {Nice}, AUTHOR = {Kristin McLeod and Christof Seiler and Maxime Sermesant and Xavier Pennec}, BOOKTITLE = {Proc. MICCAI Workshop on Statistical Atlases and Computational Models of the Heart: Mapping Structure and Function + a Cardiac Electrophysiological Simulation Challenge (STACOM+CESC'12)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {A Near-Incompressible Poly-Affine Motion Model for Cardiac Function Analysis}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Kristin.McLeod/PolyAffineHeart.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813852}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Prakosa:STACOM:12, OPTADDRESS = {}, AUTHOR = {Adityo Prakosa and Kristin McLeod and Maxime Sermesant and Xavier Pennec}, BOOKTITLE = {Proc. MICCAI Workshop on Statistical Atlases and Computational Models of the Heart: Imaging and Modelling Challenge (STACOM12)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Evaluation of iLogDemons Algorithm for Cardiac Motion Tracking in Synthetic Ultrasound Sequence}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Adityo.Prakosa/PrakosaSTACOM12.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813860}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Andre:MICCAI:12, OPTADDRESS = {}, AUTHOR = {Nicolas Savoire and Barbara André and Tom Vercauteren}, BOOKTITLE = {Proceedings of Medical Image Computing and Computer Assisted Intervention 2012 (MICCAI)}, OPTEDITOR = {}, MONTH = {October}, NOTE = {To appear}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer, Heidelberg}, SERIES = {LNCS}, TITLE = {Online Blind Calibration of Non-Uniform Photodetectors: Application to Endomicroscopy}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Barbara.Andre/MICCAI-2012-SavoireAndreVercauteren.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Seiler:MICCAI:12, OPTADDRESS = {}, AUTHOR = {Christof Seiler and Xavier Pennec and Mauricio Reyes}, BOOKTITLE = {Proceedings of Medical Image Computing and Computer Assisted Intervention 2012 (MICCAI)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {130--137}, PUBLISHER = {Springer, Heidelberg}, SERIES = {LNCS}, TITLE = {Simultaneous Multiscale Polyaffine Registration by Incorporating Deformation Statistics}, VOLUME = {7511}, YEAR = {2012}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-33418-4_17}, ISBN = {978-3-642-33417-7}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Christof.Seiler/SeilerMultiscaleGroupwisePolyaffineRegistrationMICCAI2012.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {CH}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813867}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Sommer:MMBIA:2012, ADDRESS = {Breckenridge, Colorado, USA}, AUTHOR = {Stefan Sommer and Mads Nielsen and Xavier Pennec}, BOOKTITLE = {IEEE Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA 2012)}, OPTEDITOR = {}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Sparsity and Scale: Compact Representations of Deformation for Diffeomorphic Registration}, OPTVOLUME = {}, YEAR = {2012}, ABSTRACT = {In order to detect small-scale deformations during disease propagation while allowing large-scale deformation needed for inter-subject registration, we wish to model deformation at multiple scales and represent the deformation at the relevant scales only. With the LDDMM registration framework, enforcing sparsity results in compact representations but with limited ability to represent deformation across scales. In contrast, the LDDKBM extension of LDDMM allows representations of deformation at multiple scales but it does not favour compactness and hence may represent deformation at more scales than necessary. In this paper, we combine a sparsity prior with the multi-scale framework resulting in an algorithm allowing compact representation of deformation across scales. We present a mathematical formulation of the algorithm and evaluate it on a dataset of annotated lung CT images.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://hal.inria.fr/hal-00641357/PDF/Sommer.mmbia12.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {DK}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00641357}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {Anglais} } @INPROCEEDINGS{Stretton:STIA:2012, ADDRESS = {Nice}, AUTHOR = {Erin Stretton and Emmanuel Mandonnet and Ezequiel Geremia and Bjoern H. Menze and Hervé Delingette and Nicholas Ayache}, BOOKTITLE = {Proceedings of 2nd International MICCAI Workshop on Spatiotemporal Image Analysis for Longitudinal and Time-Series Image Data (STIA'12)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Predicting the Location of Glioma Recurrence After a Resection Surgery}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Erin.Stretton/Miccai2012_Workshop_ErinStretton-Submit.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {ES}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813870}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{talbot:hal-00750835, ADDRESS = {Nice, France}, AUTHOR = {Hugo Talbot and Christian Duriez and Hadrien Courtecuisse and Jatin Relan and Maxime Sermesant and Stéphane Cotin and Hervé Delingette}, BOOKTITLE = {Statistical Atlases and Computational Models of the Heart - STACOM 2012 in the 15th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2012}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Towards Real-Time Computation of Cardiac Electrophysiology for Training Simulator}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00750835}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Talbot:VPH2012, OPTADDRESS = {}, AUTHOR = {Hugo Talbot and Stéphanie Marchesseau and Christian Duriez and Hadrien Courtecuisse and Jatin Relan and Maxime Sermesant and Stéphane Cotin and Hervé Delingette}, BOOKTITLE = {Virtual Human Project (VPH)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Interactive Electromechanical Model of the Heart for Patient-Specific Therapy Planning and Training using SOFA}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://hal.inria.fr/docs/00/75/15/37/PDF/VPH2012.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00751537}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{unkelbach_12_glioblastoma, OPTADDRESS = {}, AUTHOR = {J. Unkelbach and Bjoern H. Menze and A. Motamedi and F. Dittmann and Ender Konukoglu and Nicholas Ayache and H. Shih}, BOOKTITLE = {Proc MICCAI Workshop on Image-Guidance and Multimodal Dose Planning in Radiation Therap.}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {12 pages}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Glioblastoma growth modeling for radiotherapy target delineation.}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://people.csail.mit.edu/menze/papers/unkelbach_12_glioblastoma.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813872}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Ken:MICCAI:12, OPTADDRESS = {}, AUTHOR = {Ken C. L. Wong and Jatin Relan and Linwei Wang and Maxime Sermesant and Hervé Delingette and Nicholas Ayache and Pengcheng Shi}, BOOKTITLE = {Proceedings of Medical Image Computing and Computer Assisted Intervention 2012 (MICCAI)}, OPTEDITOR = {}, MONTH = {October}, NOTE = {To appear}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer, Heidelberg}, SERIES = {LNCS}, TITLE = {Strain-Based Regional Nonlinear Cardiac Material Properties Estimation From Medical Images}, OPTVOLUME = {}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jatin.Relan/KenMICCAI2012.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813874}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Andre:MCBRCDS:11, OPTADDRESS = {}, AUTHOR = {Barbara André and Tom Vercauteren and Nicholas Ayache}, BOOKTITLE = {Proceedings of the MICCAI Workshop - Medical Content-based Retrieval for Clinical Decision (MCBR-CDS'11)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Content-Based Retrieval in Endomicroscopy: Toward an Efficient Smart Atlas for Clinical Diagnosis}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Barbara.Andre/BarbaraANDRE_MCBR-CDS_11.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {yes}, X-PAYS = {US}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813791}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Andre:MICCAI:11, OPTADDRESS = {}, AUTHOR = {Barbara André and Tom Vercauteren and Anna M. Buchner and Michael B. Wallace and Nicholas Ayache}, BOOKTITLE = {Proceedings of Medical Image Computing and Computer Assisted Intervention (MICCAI)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {8p}, PUBLISHER = {Springer, Heidelberg}, SERIES = {LNCS}, TITLE = {Retrieval evaluation and distance learning from perceived similarity between endomicroscopy videos}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Barbara.Andre/Barbara_ANDRE_MICCAI11_CameraReadyFinal.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {}, X-PROCEEDINGS = {yes}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00598301}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{BonarettiSeiler:WorkshopMICCAI:11, OPTADDRESS = {}, AUTHOR = {S. Bonaretti and Christof Seiler and C. Boichon and P. Bchler and Mauricio Reyes}, BOOKTITLE = {Mesh Processing in Medical Image Analysis Workshop MICCAI}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Mesh-based vs. Image-based Statistical Model of Appearance of the Human Femur: A Preliminary Comparison Study for the Creation of Finite Element Meshes}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {}, X-PROCEEDINGS = {no}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813794}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Hubert:RSNA:11, OPTADDRESS = {}, AUTHOR = {H. Cochet and A. S. Jadidi and O. Corneloup and M. Lederlin and J. Relan and M. Montaudon and M. Sermesant and P. Jaïs and F. Laurent}, BOOKTITLE = {Radiological Society of North America, RSNA'11}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Myocardial Scar Modeling from Delayed Enhancement MRI: Usefulness for the Guidance of Ventricular Tachycardia Mapping and Ablation}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813795}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Hubert:HeartRhythm:11, OPTADDRESS = {}, AUTHOR = {H. Cochet and A. S. Jadidi and F. Sacher and N. Derval and M. Sermesant and J. Relan and S. J. Kim and P. Bordachar and P. Ritter and M. Hocini and M. Montaudon and F. Laurent and N. Ayache and M. Haïssaguerre and P. Jais}, BOOKTITLE = {Heart Rhythm Society '11}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Ventricular Scar At Cardiac CT Correlates To Critical Isthmuses Of Ventricular Tachycardia Circuits And Sites Of Slow Conduction During Sinus Rhythm - Evidence For Clinical Use Of CT Integration Into 3D Mapping Systems}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616206}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gibaud:CARS:11, OPTADDRESS = {}, AUTHOR = {B. Gibaud and F. Ahmad and C. Barillot and F. Michel and B. Wali and B. Batrancourt and M. Dojat and P. Girard and A. Gaignard and D. Lingrand and J. Montagnat and J. Rojas Balderrama and G. Malandain and X. Pennec and D. Godard and G. Kassel and M. Pélégrini-Issac}, BOOKTITLE = {Proc. of Computer Assisted Radiology and Surgery 2011 (CARS 2011)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A federated system for sharing and reuse of images and image processing tools in neuroimaging}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.archives-ouvertes.fr/hal-00690921}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Amir:HeartRhythm:11, OPTADDRESS = {}, AUTHOR = {A. S. Jadidi and H. Cochet and F. Sacher and S. J. Kim and M. Sermesant and J. Relan and N. Derval and S. Miyazaki and A. Shah and D. Scherr and S. B. Wilton and P. Pascale and L. Roten and M. Pederson and S. Knecht and P. Bordachar and P. Ritter and M. Hocini and M. Montaudon and F. Laurent and N. Ayache and M. Haïssaguerre and P. Jaïs}, BOOKTITLE = {Heart Rhythm Society '11}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Ventricular Scar imaging at MRI Correlates to Critical Isthmuses of Ventricular Tachycardia Circuits and Sites of Slow Conduction during Sinus Rhythm - Utility of integrating MR-data into 3D Mapping Systems}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616207}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Lombaert:FIMH:11, OPTADDRESS = {}, AUTHOR = {Herve Lombaert and Jean-Marc Peyrat and Pierre Croisille and Stanislas Rapacchi and Laurent Fanton and Patrick Clarysse and Hervé Delingette and Nicholas Ayache}, BOOKTITLE = {Proceedings of FIMH Conference 2011}, EDITOR = {Leon Axel and Dimitris Metaxas}, MONTH = {May}, NOTE = {Best Paper Award}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {171--179}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Statistical Analysis of the Human Cardiac Fiber Architecture from DT-MRI}, VOLUME = {6666}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/FIMH-lombaert.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {USA}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616208}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Lombaert:STACOM:11a, OPTADDRESS = {}, AUTHOR = {Herve Lombaert and Jean-Marc Peyrat and Laurent Fanton and Farida Cheriet and Hervé Delingette and Nicholas Ayache and Patrick Clarysse and Isabelle Magnin and Pierre Croisille}, BOOKTITLE = {Proceedings of STACOM Workshop at MICCAI 2011}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {Statistical Atlas of Human Cardiac Fibers: Comparison with Abnormal Hearts}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/MICCAI-STACOM-Lombaert-Abnormal-Hearts.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {CA}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813799}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Lombaert:STACOM:11b, OPTADDRESS = {}, AUTHOR = {Herve Lombaert and Jean-Marc Peyrat and Laurent Fanton and Farida Cheriet and Hervé Delingette and Nicholas Ayache and Patrick Clarysse and Isabelle Magnin and Pierre Croisille}, BOOKTITLE = {Proceedings of STACOM Workshop at MICCAI 2011}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {Variability of the Human Cardiac Laminar Structure}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/MICCAI-STACOM-Lombaert-Laminar-Sheet.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {CA}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813800}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Lombaert:ISMRM:11, OPTADDRESS = {}, AUTHOR = {Herve Lombaert and Jean-Marc Peyrat and Stanislas Rapacchi and Laurent Fanton and Herve Delingette and Nicholas Ayache and Pierre Croisille}, BOOKTITLE = {Proceedings of Intl. Soc. Mag. Reson. Med. (ISMRM) 2011}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {280}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Human Statistical Atlas of Cardiac Fiber Architecture from DT-MRI}, VOLUME = {19}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/ISMRM-lombaert.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {CA}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616212}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Lorenzi:MICCAI:11, OPTADDRESS = {}, AUTHOR = {Marco Lorenzi and Nicholas Ayache and Giovanni B. Frisoni and Xavier Pennec}, BOOKTITLE = {Proceedings of Medical Image Computing and Computer Assisted Intervention (MICCAI)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {663--670}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Mapping the effects of A$\beta_{1-42}$ levels on the longitudinal changes in healthy aging: hierarchical modeling based on stationary velocity fields}, VOLUME = {6892}, YEAR = {2011}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-23629-7_81}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Marco.Lorenzi/LorenziMICCAI2011.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {}, X-PROCEEDINGS = {yes}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00616213/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Lorenzi:IPMI:11, OPTADDRESS = {}, AUTHOR = {Marco Lorenzi and Nicholas Ayache and Xavier Pennec}, BOOKTITLE = {Proceedings of Information Processing in Medical Imaging (IPMI'11)}, EDITOR = {G. Szekely and H. Hahn}, OPTMONTH = {}, NOTE = {Honorable Mention (runner-up) for the Erbsmann Award}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {463--474}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Schilds Ladder for the parallel transport of deformations in time series of images}, VOLUME = {6801}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Marco.Lorenzi/IPMI2011-Lorenzi.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {}, X-PROCEEDINGS = {yes}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616210}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Lorenzi:MFCA:11, OPTADDRESS = {}, AUTHOR = {Marco Lorenzi and Xavier Pennec}, BOOKTITLE = {3rd MICCAI workshop on Mathematical Foundations of Computational Anatomy Workshop}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Geodesics, parallel transport & one-parameter subgroups}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Marco.Lorenzi/LorenziMFCA2011c.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {no}, X-INVITED-CONFERENCE = {no}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00616202/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Lorenzi:AAICAD:11, OPTADDRESS = {}, AUTHOR = {Marco Lorenzi and Xavier Pennec and Giovanni B. Frisoni}, BOOKTITLE = {Alzheimer's Association 2011 International Conference on Alzheimer's Disease (AAICAD)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Monitoring the brain's longitudinal changes in clinical trials for Alzheimers disease: a robust and reliable non-rigid registration framework}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {}, X-PROCEEDINGS = {no}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616203}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Margeta:STACOM:11, OPTADDRESS = {}, AUTHOR = {Jan Margeta and Ezequiel Geremia and Antonio Criminisi and Nicholas Ayache}, BOOKTITLE = {Proceedings of STACOM Workshop at MICCAI 2011}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {Layered Spatio-temporal Forests for Left Ventricle Segmentation from 4D Cardiac MRI Data}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jan.Margeta/MargetaMICCAI-STACOM2011.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {CA}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/hal-00646674/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Menze:IPMI:11, OPTADDRESS = {}, AUTHOR = {Bjoern H. Menze and Van Leemput, Koen and Antti Honkela and Ender Konukoglu and Marc-Andre Weber and Nicholas Ayache and Polina Golland}, BOOKTITLE = {Proceedings of Information Processing in Medical Imaging (IPMI'11)}, EDITOR = {G. Szekely and H. Hahn}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {13p}, OPTPUBLISHER = {}, SERIES = {LNCS 6801}, TITLE = {A Generative Approach for Image-Based Modeling of Tumor Growth}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://people.csail.mit.edu/menze/papers/menze_11_generative.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {}, X-PROCEEDINGS = {yes}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616211}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pennec:GRETSI:11, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Marco Lorenzi}, BOOKTITLE = {Colloque GRETSI '11}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Which parallel transport for the statistical analysis of longitudinal deformations?}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/GRETSI11_Pennec_Lorenzi.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {no}, X-INVITED-CONFERENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616204}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pop:FIMH:2011, OPTADDRESS = {}, AUTHOR = {Mihaela Pop and Maxime Sermesant and Jean-Marc Peyrat and Eugene Crystal and Sudip Ghate and Tommaso Mansi and Ilan Lashevsky and Beiping Qiang and Elliot R. McVeigh and Nicholas Ayache and Graham A. Wright}, BOOKTITLE = {FIMH}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {195-205}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A 3D MRI-Based Cardiac Computer Model to Study Arrhythmia and Its In-vivo Experimental Validation}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/Pop-FIMH2011.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616205}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{prakosa:MICCAI:2011, ADDRESS = {Toronto, Canada}, AUTHOR = {Adityo Prakosa and Maxime Sermesant and Hervé Delingette and Eric Saloux and Pascal Allain and Pascal Cathier and Patrick Etyngier and Nicolas Villain and Nicholas Ayache}, BOOKTITLE = {Proceedings of Medical Image Computing and Computer Assisted Intervention (MICCAI)}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {8p}, PUBLISHER = {Springer, Heidelberg}, SERIES = {LNCS}, TITLE = {Synthetic Echocardiographic Image Sequences for Cardiac Inverse Electro-Kinematic Learning}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Adityo.Prakosa/PrakosaMICCAI11.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616214}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Relan:STACOM:11, OPTADDRESS = {}, AUTHOR = {J. Relan and M. Sermesant and H. Delingette and N. Ayache}, BOOKTITLE = {Statistical Atlases and Computational Models of the Heart. Imaging and Modelling Challenges - Second International Workshop, STACOM 2011, Held in Conjunction with MICCAI 2011}, CROSSREF = {DBLP:conf/miccai/2011stacom}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {14-22}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Personalisation of a 3D Ventricular Electrophysiological Model, Using Endocardial and Epicardial Contact Mapping and MRI}, OPTVOLUME = {}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jatin.Relan/STACOM_II_Jatin_Relan.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813804}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Seiler:MICCAI:11, OPTADDRESS = {}, AUTHOR = {Christof Seiler and Xavier Pennec and Mauricio Reyes}, BOOKTITLE = {Proceedings of Medical Image Computing and Computer Assisted Intervention 2011 (MICCAI)}, OPTEDITOR = {}, MONTH = {September}, NOTE = {Young Scientist Award}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {631-638}, PUBLISHER = {Springer, Heidelberg}, SERIES = {LNCS}, TITLE = {Geometry-Aware Multiscale Image Registration Via OBBTree-Based Polyaffine Log-Demons}, VOLUME = {6892}, YEAR = {2011}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-23629-7_77}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Christof.Seiler/SeilerOBBTreeMultiscalePolyLogDemonsMICCAI2011.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616215}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Seiler:SPIE:11, OPTADDRESS = {}, AUTHOR = {Christof Seiler and Xavier Pennec and Lucas Ritacco and Mauricio Reyes}, BOOKTITLE = {Proceedings of SPIE Medical Imaging '11}, EDITOR = {Benoit M. Dawant and David R. Haynor}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {Paper 7962-15}, PUBLISHER = {SPIE Publishing}, OPTSERIES = {}, TITLE = {Femur Specific Polyaffine Model to Regularize the Log-Domain Demons Registration}, VOLUME = {7962}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, ISBN = {9780819485045}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Christof.Seiler/SeilerFemurPolyaffineLogDemonsSPIE2011.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {CH}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616216}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{SILESS:MBIA:2011, OPTADDRESS = {}, AUTHOR = {Viviana Siless and Pamela Guevara and Xavier Pennec and Pierre Fillard}, BOOKTITLE = {Multimodal Brain Image Analysis (First Int. MICCAI Workshop on)}, EDITOR = {Tianming Liu and Dinggang Shen and Luis Ibanez and Xiaodong Tao}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {10-18}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Joint T1 and Brain Fiber Diffeomorphic Registration Using the Demons}, VOLUME = {7012}, YEAR = {2011}, ABSTRACT = {Non-linear image registration is one of the most challenging task in medical image analysis. In this work, we propose an extension of the well-established diffeomorphic Demons registration algorithm to take into account geometric constraints. Combining the deformation field induced by the image and the geometry, we define a mathematically sound framework to jointly register images and geometric descriptors such as fibers or sulcal lines. We demonstrate this framework by registering simultaneously T 1 images and 50 fiber bundles consistently extracted in 12 subjects. Results show the improvement of fibers alignment while maintaining, and sometimes improving image registration. Further comparisons with non-linear T 1 and tensor registration demonstrate the superiority of the Geometric Demons over their purely iconic counterparts.}, DOI = {10.1007/978-3-642-24446-9_2}, ISBN = {978-3-642-24445-2}, OPTISSN = {}, KEYWORDS = { Registration - neural fibers - diffeomorphism - Demons Algorithm - intensity-base registration - tensor-base registration}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {http://hal.inria.fr/inria-00627971/PDF/Joint_T1_and_Brain_Fiber_Diffeomorphic_Registration_Using_the_Demons_.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00627971}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {Anglais} } @INPROCEEDINGS{Sommer:IPMI:11, OPTADDRESS = {}, AUTHOR = {Stefan Sommer and François Lauze and Mads Nielsen and Xavier Pennec}, BOOKTITLE = {Proceedings of Information Processing in Medical Images IPMI'11}, EDITOR = {Gabor Szekely and Horst Hahn}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {624--635}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {A Multi-scale Kernel Bundle for LDDMM: Towards Sparse Deformation Description Across Space and Scales}, VOLUME = {6801}, YEAR = {2011}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-22092-0_51}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Sommer.IPMI11.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {DK}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616209}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Sommer:SSVM:2011, ADDRESS = {Ein-Gedi, Israël}, AUTHOR = {Stefan Sommer and François Lauze and Mads Nielsen and Xavier Pennec}, BOOKTITLE = {Scale Space and Variational Methods in Computer Vision}, EDITOR = {A.M. Bruckstein and ter Haar Romeny, B. and A.M. Bronstein and M.M. Bronstein}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Kernel Bundle EPDiff: Evolution Equations for Multi-Scale Diffeomorphic Image Registration}, VOLUME = {6667}, YEAR = {2011}, ABSTRACT = {In the LDDMM framework, optimal warps for image registration are found as end-points of critical paths for an energy functional, and the EPDiff equations describe the evolution along such paths. The Large Deformation Diffeomorphic Kernel Bundle Mapping (LDDKBM) extension of LDDMM allows scale space information to be automatically incorporated in registrations and promises to improve the standard framework in several aspects. We present the mathematical foundations of LDDKBM and derive the KB-EPDiff evolution equations, which provide optimal warps in this new framework. To illustrate the resulting diffeomorphism paths, we give examples showing the decoupled evolution across scales and how the method automatically incorporates deformation at appropriate scales.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {http://hal.inria.fr/hal-00644965/PDF/Sommer.SSVM11.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {DK}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00644965}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {Anglais} } @INPROCEEDINGS{Andre:MICCAI:10, ADDRESS = {Beijing, China}, AUTHOR = {Barbara André and Tom Vercauteren and Anna M. Buchner and Muhammad Waseem Shahid and Michael B. Wallace and Nicholas Ayache}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'10)}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, NUMBER = {6362}, OPTORGANIZATION = {}, PAGES = {480--487}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {An image retrieval approach to setup difficulty levels in training systems for endomicroscopy diagnosis}, OPTVOLUME = {}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Barbara.Andre/Barbara_ANDRE_MICCAI10.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {US}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616153}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Andre:ISBI:10, OPTADDRESS = {}, AUTHOR = {Barbara André and Tom Vercauteren and Michael B. Wallace and Anna M. Buchner and Nicholas Ayache}, BOOKTITLE = {Proceedings of the Seventh IEEE International Symposium on Biomedical Imaging 2010 (ISBI'10)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1419--1422}, PUBLISHER = {IEEE}, OPTSERIES = {}, TITLE = {Endomicroscopic video retrieval using mosaicing and visual words}, OPTVOLUME = {}, YEAR = {2010}, OPTABSTRACT = {}, DOI = {10.1109/ISBI.2010.5490265}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Barbara.Andre/ANDRE_ISBI_10.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {US}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616164}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{BauerSeiler:EMBC:10, OPTADDRESS = {}, AUTHOR = {S. Bauer and Christof Seiler and T. Bardyn and P. Büchler and Mauricio Reyes}, BOOKTITLE = {EMBC}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Atlas-Based Segmentation of Brain Tumor Images Using a Markov Random Field-Based Tumor Growth Model and Non-Rigid Registration}, OPTVOLUME = {}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{BonarettiSeiler:CMBBE:10, OPTADDRESS = {}, AUTHOR = {S. Bonaretti and M. Kistler and C. Seiler and M. Reyes and P. Büchler}, BOOKTITLE = {CMBBE}, OPTEDITOR = {}, MONTH = {February}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Combined Statistical Model of Bone Shape and Mechanical Properties for Bone and Implant Modeling}, OPTVOLUME = {}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00847603}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Brun:MLMI:2010, ADDRESS = {Beijing}, AUTHOR = {Caroline Brun and Natasha Leporé and Y.-Y. Chou and Xavier Pennec and de Zubicaray, Greig and K.L. McMahon and M.J. Wright and James C. Gee and Paul M. Thompson}, BOOKTITLE = {Workshop on Machine Learning in Medical Imaging (MLMI'2010)}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A 3D Statistical Fluid Registration Algorithm}, OPTVOLUME = {}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Brun_Safira_MLMI2010.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {US}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616169}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Brun:ISBI:10, OPTADDRESS = {}, AUTHOR = {Caroline Brun and Natasha Leporé and Xavier Pennec and Y.-Y. Chou and A.D. Lee and M. Barysheva and de Zubicaray, Greig and K.L. McMahon and M.J. Wright and Paul M. Thompson}, BOOKTITLE = {Proceedings of the Seventh IEEE International Symposium on Biomedical Imaging 2010 (ISBI'10)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {364--367}, PUBLISHER = {IEEE}, OPTSERIES = {}, TITLE = {Statistically assisted fluid image registration algorithm - SAFIRA}, OPTVOLUME = {}, YEAR = {2010}, OPTABSTRACT = {}, DOI = {10.1109/ISBI.2010.5490335}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Brun.ISBI2010.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {US}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616165}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Durrleman:STIA:2010, ADDRESS = {Beijing, China}, AUTHOR = {Stanley Durrleman and Xavier Pennec and Alain Trouvé and Nicholas Ayache and José Braga}, BOOKTITLE = {Miccai Workshop on Spatio-Temporal Image Analysis for Longitudinal and Time-Series Image Data}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Comparison of the endocast growth of chimpanzees and bonobos via temporal regression and spatiotemporal registration}, OPTVOLUME = {}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Stanley.Durrleman/Durrleman_STIA10.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616154}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Durrleman:AAPA:10, OPTADDRESS = {}, AUTHOR = {Stanley Durrleman and Xavier Pennec and Alain Trouvé and Nicholas Ayache and José Braga}, BOOKTITLE = {Abstracts of the 79-th annual meeting of the American Assoc. of Physical Anthropologists (AAPA), April 2010, Albuquerque}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {78-79}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Measuring the inter-species variability of endocast growth using shape regression and spatiotemporal registration}, OPTVOLUME = {}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://physanth.org/annual-meeting/2010/79th-annual-meeting-2010/2010 AAPA Abstracts.pdf}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00875361}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Garcia:2010:EMPIRE10:2, ADDRESS = {Beijing, China}, AUTHOR = {Vincent Garcia and Olivier Commowick and Grégoire Malandain}, BOOKTITLE = {Grand Challenges in Medical Image Analysis (MICCAI workshop)}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A Robust and Efficient Block Matching Framework for Non Linear Registration of Thoracic CT Images}, OPTVOLUME = {}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Vincent.Garcia/Garcia_2010_EMPIRE10_2.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616148}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } 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Duckett and Anoop Shetty and Radomir Chabiniok and Tommaso Mansi and Florence Billet and Jean-Marc Peyrat and Hervé Delingette and Philippe Moireau and Michel Sorine and Dominique Chapelle and Nicholas Ayache and Matthew Ginks and Reza Razavi}, BOOKTITLE = {Heart Rhythm 2010 : 31st Annual Scientific Sessions}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Biophysical Modelling To Predict Acute Hemodynamic Response To Cardiac Resynchronization Therapy In Human}, OPTVOLUME = {}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/hal-00793657}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Seiler:ISBI:10, OPTADDRESS = {}, AUTHOR = {Christof Seiler and Xavier Pennec and Mauricio Reyes}, BOOKTITLE = {Proceedings of the Seventh IEEE International Symposium on Biomedical Imaging 2010 (ISBI'10)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {452--455}, PUBLISHER = {IEEE}, OPTSERIES = {}, TITLE = {Parametric regression of 3D medical images through the exploration of non-parametric regression models}, OPTVOLUME = {}, YEAR = {2010}, OPTABSTRACT = {}, DOI = {10.1109/ISBI.2010.5490313}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Seiler.ISBI2010.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {CH}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616168}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Sweet:CDMRI:2010, ADDRESS = {Beijing, China}, AUTHOR = {Andrew Sweet and Xavier Pennec}, BOOKTITLE = {Proc. of MICCAI Workshop on Computational Diffusion MRI 2010}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A Log-Euclidean Statistical Analysis of DTI Brain Deformations}, OPTVOLUME = {}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {diffusion tensor imaging, computational anatomy, diffeomorphic registration, exponential map}, URL = {https://www-sop.inria.fr/asclepios/Publications/Andrew.Sweet/cdmri2010.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-01525407}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Sweet:WBIR:2010, ADDRESS = {Lübeck, Germany}, AUTHOR = {Andrew Sweet and Xavier Pennec}, BOOKTITLE = {Proc. of Workshop on Biomedical Image Registration 2010}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {198-209}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Log-Domain Diffeomorphic Registration of Diffusion Tensor Images}, VOLUME = {6204}, YEAR = {2010}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-14366-3_18}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {diffusion tensor imaging, computational anatomy, diffeomorphic registration, exponential map}, URL = {https://www-sop.inria.fr/asclepios/Publications/Andrew.Sweet/wbir2010.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616163}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Toussaint:MICCAI:10, ADDRESS = {Beijing, China}, AUTHOR = {Nicolas Toussaint and Christian T. 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Batchelor}, BOOKTITLE = {Book of Abstracts, International Society in Magnetic Resonance in Medicine (ISMRM'10)}, OPTEDITOR = {}, MONTH = {2-7 June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Three-dimensional Prolate Spheroidal Extrapolation for Sparse DTI of the In-vivo Heart}, OPTVOLUME = {}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicolas.Toussaint/Toussaint.ISMRM.10.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {GB}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616146}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Ken:STACOM:2010, OPTADDRESS = {}, AUTHOR = {Ken C. L. 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Prince and Dzung L. Pham and Kyle J. Myers}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {114-125}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {A Statistical Model of White Matter Fiber Bundles based on Currents}, VOLUME = {5636}, YEAR = {2009}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-02498-6_10}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Stanley.Durrleman/DurrlemanIPMI09.pdf}, OPTURL-PUBLISHER = {}, PMID = {19694257}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {}, X-PROCEEDINGS = {yes}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00502721/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Durrleman:MICCAI:09, ADDRESS = {London, UK}, AUTHOR = {Stanley Durrleman and Xavier Pennec and Alain Trouvé and Guido Gerig and Nicholas Ayache}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'09), Part I}, EDITOR = {Guang-Zhong Yang and David Hawkes and Daniel Rueckert and Alison Noble and Chris Taylor}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {297--304}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Spatiotemporal Atlas Estimation for Developmental Delay Detection in Longitudinal Datasets}, VOLUME = {5761}, YEAR = {2009}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-04268-3_37}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Stanley.Durrleman/MICCAI09_Durrleman.pdf}, OPTURL-PUBLISHER = {}, PMID = {20426000}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {US}, X-PROCEEDINGS = {yes}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00408293}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gorbunova:WPIA:09, ADDRESS = {London United Kingdom}, AUTHOR = {V. Gorbunova and Stanley Durrleman and P. Lo and Xavier Pennec and de Bruijne, M.}, BOOKTITLE = {Proc. of Second International Workshop on Pulmonary Image Analysis}, EDITOR = {M. Brown and de Bruijne, M. and van Ginneken, B. and A. Kiraly and J.M. Kuhnigk and C. Lorenz and J.R. McClelland and K. Mori and A.P. Reeves and J. Reinhardt}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {15--25}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Curve- and surface-based registration of lung CT images via currents}, OPTVOLUME = {}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.lungworkshop.org/2009/proc2009/15.pdf}, URL-PUBLISHER = {http://www.lungworkshop.org/2009/proc2009/}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {DK}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616136}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Heimann:CBMW:09, OPTADDRESS = {}, AUTHOR = {Tobias Heimann and François Chung and Hans Lamecker and Hervé Delingette}, BOOKTITLE = {Computational Biomechanics for Medicine IV Workshop 2009}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Subject-Specific Ligament Models: Towards Real-Time Simulation of the Knee Joint}, OPTVOLUME = {}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://hal.inria.fr/inria-00616129/document}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616129}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Hufnagel:WC:09, OPTADDRESS = {}, AUTHOR = {Heike Hufnagel and Jan Ehrhardt and Xavier Pennec and Heinz Handels}, BOOKTITLE = {World Congress on Medical Physics and Biomedical Engineering, WC 2009, München}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {2181--2184}, PUBLISHER = {Springer}, SERIES = {IFMBE Proceedings}, TITLE = {Application of a Probabilistic Statistical Shape Model to Automatic Segmentation}, VOLUME = {25/4}, YEAR = {2009}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-03882-2_579}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Heike.Hufnagel/Hufnagel_WC09.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {DE}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616144}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Hufnagel:PMMIA:09, OPTADDRESS = {}, AUTHOR = {Heike Hufnagel and Jan Ehrhardt and Xavier Pennec and Alexander Schmidt-Richberg and Heinz Handels}, BOOKTITLE = {Proc. of MICCAI Workshop Probabilistic Model for Medical Image Analysis (PMMIA'09)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Level Set Segmentation Using a Point-Based Statistical Shape Model Relying on Correspondence Probabilities}, OPTVOLUME = {}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Heike.Hufnagel/Hufnagel_PMMIA09.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {DE}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Kainmueller-2009a, OPTADDRESS = {}, AUTHOR = {D. Kainmüller and Hans Lamecker and H. Seim and M. Zinser and S. Zachow}, BOOKTITLE = {Proc. Medical Image Computing and Computer Assisted Intervention}, EDITOR = {Guang-Zhong Yang and David Hawkes and Daniel Rueckert and Alison Noble and Chris Taylor}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {76-83}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Automatic Extraction of Mandibular Nerve and Bone from Cone-Beam CT Data}, VOLUME = {5762}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.springerlink.com/content/372l6n99476115h7/}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {DE}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616134}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{LAMECKER:2009:INRIA-00417371:1, ADDRESS = {London United Kingdom}, AUTHOR = {Hans Lamecker and Tommaso Mansi and Jatin Relan and Florence Billet and Maxime Sermesant and Nicholas Ayache and Hervé Delingette}, BOOKTITLE = {MICCAI Workshop on Cardiovascular Interventional Imaging and Biophysical Modelling (CI2BM09)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {149-158}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Adaptive Tetrahedral Meshing for Personalized Cardiac Simulations}, OPTVOLUME = {}, YEAR = {2009}, ABSTRACT = {{P}ersonalized simulation for therapy planning in the clinical routine requires fast and accurate computations. {F}inite-element ({FE}) simulations belong to the most commonly used approaches. {B}ased on medical images the geometry of the patient's anatomy must be faithfully represented and discretized in a way to find a reasonable compromise between accuracy and speed. {T}his can be achieved by adapting the mesh resolution, and by providing well-shaped elements to improve the convergence of iterative solvers. {W}e present a pipeline for generating high-quality, adaptive meshes, and show how the framework can be applied to specific cardiac simulations. {O}ur aim is to analyze the meshing requirements for applications in electrophysiological modeling of ventricular tachycardia and electromechanical modeling of {T}etralogy of {F}allot.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {elements, modeling, mesh quality, mesh size control}, URL = {http://hal.inria.fr/docs/00/41/73/71/PDF/4_7_paper108.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00417371}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Mansi:MICCAI:09, ADDRESS = {London, UK}, AUTHOR = {Tommaso Mansi and Stanley Durrleman and Boris Bernhardt and Maxime Sermesant and Hervé Delingette and Ingmar Voigt and Philipp Lurz and Andrew M Taylor and Julie Blanc and Younes Boudjemline and Xavier Pennec and Nicholas Ayache}, BOOKTITLE = {Proc. Medical Image Computing and Computer Assisted Intervention (MICCAI'09)}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {214-221}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {A Statistical Model of Right Ventricle in Tetralogy of Fallot for Prediction of Remodelling and Therapy Planning}, VOLUME = {5761}, YEAR = {2009}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-04268-3_27}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tommaso.Mansi/mansi09MICCAI.pdf}, OPTURL-PUBLISHER = {}, PMID = {20425990}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {DE,UK}, X-PROCEEDINGS = {yes}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616175}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Mansi:FIMH:09, OPTADDRESS = {}, AUTHOR = {Tommaso Mansi and Jean-Marc Peyrat and Maxime Sermesant and Hervé Delingette and Julie Blanc and Younes Boudjemline and Nicholas Ayache}, BOOKTITLE = {Proceedings of Functional Imaging and Modeling of the Heart 2009 (FIMH'09)}, OPTEDITOR = {}, MONTH = {3-5 June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {201-210}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Physically-Constrained Diffeomorphic Demons for the Estimation of 3D Myocardium Strain from Cine-MRI}, VOLUME = {5528}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tommaso.Mansi/mansi09FIMH.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616138}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pop:FIMH:09, OPTADDRESS = {}, AUTHOR = {Mihaela Pop and Maxime Sermesant and Tommaso Mansi and Eugene Crystal and Jay Detsky and _Yuesong Yang and Paul Fefer and Elliot McVeigh and Alexander Dick and Nicholas Ayache and Graham Wright}, BOOKTITLE = {Proceedings of Functional Imaging and Modeling of the Heart 2009 (FIMH'09)}, OPTEDITOR = {}, MONTH = {3-5 June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1-10}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Characterization of Post-infarct Scars in a Porcine Model - a Combined Experimental and Theoretical Study}, VOLUME = {5528}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/pop09-FIMH.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {GB,US,CA}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616176}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Ramus:ISBI:09, ADDRESS = {Boston, MA}, AUTHOR = {Liliane Ramus and Grégoire Malandain}, BOOKTITLE = {Proceedings of the Sixth IEEE International Symposium on Biomedical Imaging 2009 (ISBI'09)}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Using consensus measures for atlas construction}, OPTVOLUME = {}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Liliane.Ramus/isbi09_lramus.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616142}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Relan:ISBI:09, ADDRESS = {Boston, MA}, AUTHOR = {Jatin Relan and Maxime Sermesant and Hervé Delingette and Mihaela Pop and Graham Wright and Nicholas Ayache}, BOOKTITLE = {IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'09)}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1027-1030}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Quantitative comparison of two cardiac electrophysiology models using personalisation to optical and MR data}, OPTVOLUME = {}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {bioelectric phenomena, biomedical MRI, biomedical optical imaging, cardiology, image resolution, medical image processing, physiological modelsAliev-Panfilov model, MRI, cardiac models, depolarisation, electrophysiology, optical imaging, phenomenological model, porcine healthy heart, repolarisation, spatial resolution, temporal resolution}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jatin.Relan/relan_ISBI.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {CA}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616130}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Relan:IFMBEProceedings:WorldCongress:09, ADDRESS = {Munich, Germany}, AUTHOR = {Jatin Relan and Maxime Sermesant and Mihaela Pop and Hervé Delingette and Michel Sorine and Graham Wright and Nicholas Ayache}, BOOKTITLE = {World Congress on Medical Physics and Biomedical Engineering}, EDITOR = {Olaf Dössel and Wolfgang C. Schlegel}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1716--1719}, PUBLISHER = {Springer}, SERIES = {IFMBE Proceedings}, TITLE = {Parameter Estimation of a 3D Cardiac Electrophysiology Model Including the Restitution Curve Using Optical and MR Data}, VOLUME = {25/IV}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jatin.Relan/relan_WorldCongress09.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {CA}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616143}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{RELAN:2009:INRIA-00418471:1:MICCAI_CI2BM_Workshop, ADDRESS = {London, UK}, AUTHOR = {Jatin Relan and Maxime Sermesant and Mihaela Pop and Hervé Delingette and Michel Sorine and Graham Wright and Nicholas Ayache}, BOOKTITLE = {MICCAI Workshop on Cardiovascular Interventional Imaging and Biophysical Modelling - CI2BM09}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {19--27}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Volumetric Prediction of Cardiac Electrophysiology using a Heart Model Personalised to Surface Data}, OPTVOLUME = {}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://hal.inria.fr/docs/00/41/84/71/PDF/1_5_paper118a4.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {CA}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00418471}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Riklin-Raviv:MICCAI-PMMIA:2009, ADDRESS = {London, UK}, AUTHOR = {Tammy Riklin-Raviv and Bjoern H. Menze and Van Leemput, Koen and Bram Stieltjes and Marc-André Weber and Nicholas Ayache and William M. Wells and Polina Golland}, BOOKTITLE = {MICCAI Workshop on Probabilistic Methods in Medical Image Analysis (PMMIA'09))}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Joint segmentation via patient-specific latent anatomy model}, OPTVOLUME = {}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://people.csail.mit.edu/menze/papers/riklinraviv_09_joint.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {US,DE}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616174}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Sabuncu:MICCAI:09, ADDRESS = {London, UK}, AUTHOR = {Mert Sabuncu and Boon Thye Thomas Yeo and Tom Vercauteren and Van Leemput, Koen and Polina Golland}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'09), Part I}, EDITOR = {Guang-Zhong Yang and David Hawkes and Daniel Rueckert and Alison Noble and Chris Taylor}, MONTH = {September}, NOTE = {PMID:20426033}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {565--573}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Asymmetric Image-Template Registration}, VOLUME = {5761}, YEAR = {2009}, OPTABSTRACT = {}, DOI = {10.1007/978-3-642-04268-3_70}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://people.csail.mit.edu/msabuncu/Sabuncu_AsymmetricRegistration_Miccai09.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {US}, X-PROCEEDINGS = {yes}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616131}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Sermesant:FIMH:09, OPTADDRESS = {}, AUTHOR = {Maxime Sermesant and Florence Billet and Radomir Chabiniok and Tommaso Mansi and Phani Chinchapatnam and Philippe Moireau and Jean-Marc Peyrat and Kawal Rhode and Matt Ginks and Pier Lambiase and Simon Arridge and Hervé Delingette and Michel Sorine and Aldo Rinaldi and Dominique Chapelle and Reza Razavi and Nicholas Ayache}, BOOKTITLE = {Proceedings of Functional Imaging and Modeling of the Heart 2009 (FIMH'09)}, OPTEDITOR = {}, MONTH = {3-5 June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {239-248}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Personalised Electromechanical Model of the Heart for the Prediction of the Acute Effects of Cardiac Resynchronisation Therapy}, VOLUME = {5528}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/sermesant09-FIMH.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {UK}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616177}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Toussaint:ESMRMB:09, ADDRESS = {Antalya, Turkey}, AUTHOR = {N. Toussaint and S. Durrleman and M. Sermesant and S. Kozerke and P. Batchelor}, BOOKTITLE = {Book of Abstracts, European Society of Magnetic Resonance in Medicine (ESMRMB) 26th Annual Scientific Meeting}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {59}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Error Assessment on myocardial fiber orientations from DTI measurements}, VOLUME = {22}, YEAR = {2009}, OPTABSTRACT = {}, DOI = {10.1007/s10334-009-0175-1}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {UK}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616173}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Andre:ISBMS:08, ADDRESS = {London, UK}, AUTHOR = {Barbara André and Hervé Delingette}, BOOKTITLE = {Fourth International Symposium on BioMedical Simulation (ISBMS'08)}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {147--156}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Versatile design of changing mesh topologies for surgery simulation}, VOLUME = {5104}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://hal.inria.fr/inria-00616115/document}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616115}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Billet:MICCAI:08, OPTADDRESS = {}, AUTHOR = {Florence Billet and Maxime Sermesant and Hervé Delingette and Nicholas Ayache}, BOOKTITLE = {Proc. of the Workshop on Computational Biomechanics for Medicine III. (Workshop MICCAI-2008)}, EDITOR = {K. Miller and P.M.F. Nielsen}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Cardiac Motion Recovery by Coupling an Electromechanical Model and Cine-MRI Data: First Steps}, OPTVOLUME = {}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Florence.Billet/Billet_MICCAI08.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616127}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Brun:MICCAI:08, ADDRESS = {New York, USA}, AUTHOR = {Caroline Brun and Natasha Leporé and Xavier Pennec and Yi-Yu Chou and Agatha D. Lee and Marina Barysheva and de Zubicaray, Greig I. and Matthew Meredith and Katie McMahon and Margaret J. Wright and Arthur W. Toga and Paul M. Thompson}, BOOKTITLE = {Proc. 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Lee and de Zubicaray, Greig I. and Katie McMahon and Margaret J. Wright and Marina Barysheva and Arthur W. Toga and Paul M. Thompson}, BOOKTITLE = {Proc. of the 2008 IEEE Int. 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This has been corrected in the pdf available here.}, AUTHOR = {Olivier Commowick and Pierre Fillard and Olivier Clatz and Simon K. Warfield}, BOOKTITLE = {Proc. 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Joshi}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Comparing algorithms for diffeomorphic registration: Stationary LDDMM and Diffeomorphic Demons}, OPTVOLUME = {}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/events/MFCA08/Proceedings/mfca08_1_3.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {ES}, X-PROCEEDINGS = {yes}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00629883}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Hufnagel:BVM:08, OPTADDRESS = {}, AUTHOR = {Heike Hufnagel and Xavier Pennec and Jan Ehrhardt and Nicholas Ayache and Heinz Handels}, BOOKTITLE = {Bildverarbeitung für die Medizin 2008}, EDITOR = { Springer}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {277-282}, OPTPUBLISHER = {}, SERIES = {Informatik aktuell}, TITLE = {A Global Criterion for the Computation of Statistical Shape Model Parameters Based on Correspondence Probabilities}, VOLUME = {14}, YEAR = {2008}, OPTABSTRACT = {}, DOI = {10.1007/978-3-540-78640-5_56}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Heike.Hufnagel/Hufnagel_BVM08.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {no}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {DE}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616114}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Hufnagel:SPIE:08, ADDRESS = {San Diego, USA}, AUTHOR = {H. 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Toussaint and T. Mansi and H. Delingette and Nicholas Ayache and M. Sermesant}, BOOKTITLE = {Proc. Eurographics Workshop on Visual Computing for Biomedicine (VCBM)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {An Integrated Platform for Dynamic Cardiac Simulation and Image Processing: Application to Personalised Tetralogy of Fallot Simulation}, OPTVOLUME = {}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Cardiac Simulation, Freeware, Dynamics, Visualization, VTK}, URL = {https://www-sop.inria.fr/asclepios/Publications/Nicolas.Toussaint/Toussaint.VCBM08.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616120}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Vercauteren:SPIEBIOS:08, ADDRESS = {San Jose, CA, USA}, AUTHOR = {Tom Vercauteren and Alexander Meining and François Lacombe and Aymeric Perchant}, BOOKTITLE = {Proc. 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Ayache}, BOOKTITLE = {Proceedings of the 20th International Conference on Information Processing in Medical Imaging (IPMI'07)}, OPTEDITOR = {}, MONTH = {2-6 July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {686-699}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {A Recursive Anisotropic Fast Marching Approach to Reaction Diffusion Equation: Application to Tumor Growth Modeling}, VOLUME = {4584}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Ender.Konukoglu/ipmi_2007_konukoglu-color.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616056}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{landabaso07:3DTV, OPTADDRESS = {}, AUTHOR = {J. L. Landabaso and T. 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Toga and Paul M. Thompson}, BOOKTITLE = {Proc. Medical Image Computing and Computer Assisted Intervention (MICCAI'07)}, EDITOR = {Nicholas Ayache and Sébastien Ourselin and Anthony Maeder}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {826-833}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Mean Template for Tensor-Based Morphometry using Deformation Tensors}, VOLUME = {4792}, YEAR = {2007}, OPTABSTRACT = {}, DOI = {10.1007/978-3-540-75759-7_100}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Lepore_MICCAI07.pdf}, OPTURL-PUBLISHER = {}, PMID = {18044645}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616043}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{nemo-glatard-etal:2007, ADDRESS = {Salt Lake City, Utah, USA}, AUTHOR = {Clémentine Nemo and Tristan Glatard and Mireille Blay-Fornarino and Johan Montagnat}, BOOKTITLE = {International Conference on Services Computing (SCC 2007)}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IEEE Computer Engineering}, PAGES = {364--371}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Merging overlapping orchestrations: an application to the Bronze Standard medical application}, OPTVOLUME = {}, YEAR = {2007}, OPTABSTRACT = {}, DOI = {10.1109/SCC.2007.79}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.i3s.unice.fr/~johan/publis/SCC07.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.archives-ouvertes.fr/hal-00683168}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Nicolau:MICCAI:07, ADDRESS = {Brisbane, Australia}, AUTHOR = {Stephane Nicolau and Xavier Pennec and Luc Soler and Nicholas Ayache}, BOOKTITLE = {Proc. 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Maeder}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {77--85}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Clinical Evaluation of a Respiratory Gated Guidance System for Liver Punctures}, VOLUME = {4792}, YEAR = {2007}, OPTABSTRACT = {}, DOI = {10.1007/978-3-540-75759-7_10}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PMID = {18044555}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616044}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Perchant:ISBI:07, ADDRESS = {Metro Washington DC, USA}, AUTHOR = {Aymeric Perchant and Tom Vercauteren and Fabien Oberrietter and Nicolas Savoire and Nicholas Ayache}, BOOKTITLE = {Proceedings IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'07)}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {260--263}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Region Tracking Algorithms on Laser Scanning Devices Applied to Cell Traffic Analysis}, OPTVOLUME = {}, YEAR = {2007}, OPTABSTRACT = {}, DOI = {10.1109/ISBI.2007.356838}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tom.Vercauteren/RegionTrackingCellTraffic-ISBI07-Perchant.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00166610}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Peyrat:FIMH:07, OPTADDRESS = {}, AUTHOR = {Jean-Marc Peyrat and Maxime Sermesant and Hervé Delingette and Xavier Pennec and Chenyang Xu and Elliot McVeigh and Nicholas Ayache}, BOOKTITLE = {Proceedings of Functional Imaging and Modeling of the Heart 2007 (FIMH'07)}, OPTEDITOR = {}, MONTH = {7-9 June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {413-423}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Statistical Comparison of Cardiac Fibre Architectures}, VOLUME = {4466}, YEAR = {2007}, OPTABSTRACT = {}, DOI = {10.1007/978-3-540-72907-5_42}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jean-Marc.Peyrat/Peyrat_2007_FIMH.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616049}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pop:FIMH:07, OPTADDRESS = {}, AUTHOR = {M. 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Ayache and L.-P. Nolte and González Ballester, M. A.}, BOOKTITLE = {Proceedings of IEEE International Symposium on Biomedical Imaging (ISBI)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1216-1219}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Statistical Shape Analysis via Principal Factor Analysis}, OPTVOLUME = {}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Mauricio.Reyes/reyes_ISBI07.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616053}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Sermesant:FIMH:07, OPTADDRESS = {}, AUTHOR = {M. Sermesant and E. Konukoglu and H. Delingette and Y. Coudiere and P. Chinchaptanam and K.S. Rhode and R. Razavi and N. Ayache}, BOOKTITLE = {Proceedings of Functional Imaging and Modeling of the Heart 2007 (FIMH'07)}, OPTEDITOR = {}, MONTH = {7-9 June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {160-169}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {An anisotropic multi-front fast marching method for real-time simulation of cardiac electrophysiology}, VOLUME = {4466}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/FIMH2007Sermesant.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616051}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Toussaint:MiccaiOpenWorkshop:07, ADDRESS = {Brisbane, Australia}, AUTHOR = {N. Toussaint and M. 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Information Processing in Medical Imaging (IPMI'07)}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {495--506}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Insight Into Efficient Image Registration Techniques and the Demons Algorithm}, VOLUME = {4584}, YEAR = {2007}, OPTABSTRACT = {}, DOI = {10.1007/978-3-540-73273-0_41}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tom.Vercauteren/InsightEffRegDemons-IPMI07-Vercauteren.pdf}, OPTURL-PUBLISHER = {}, PMID = {17633724}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00165534}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Vercauteren:IJ:07, OPTADDRESS = {}, AUTHOR = {Tom Vercauteren and Xavier Pennec and Aymeric Perchant and Nicholas Ayache}, BOOKTITLE = {Insight Journal -- ISC/NA-MIC Workshop on Open Science at MICCAI 2007}, OPTEDITOR = {}, MONTH = {October}, NOTE = {Source code available at rlhttp://hdl.handle.net/1926/510}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Diffeomorphic Demons Using ITK's Finite Difference Solver Hierarchy}, OPTVOLUME = {}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://hdl.handle.net/1926/510}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616035}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Vercauteren:MICCAI:07, ADDRESS = {Brisbane, Australia}, AUTHOR = {Tom Vercauteren and Xavier Pennec and Aymeric Perchant and Nicholas Ayache}, BOOKTITLE = {Proc. 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Pluim and B. Likar and F.A. Gerritsen}, MONTH = {9 - 11 July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {120-127}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {A Log-Euclidean Polyaffine Framework for Locally Rigid or Affine Registration}, VOLUME = {4057}, YEAR = {2006}, OPTABSTRACT = {}, DOI = {10.1007/11784012_15}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Polyaffine transformations, Diffeomorphisms, Non-rigid registration, Multi-affine registration, Lie groups, Log-Euclidean metrics, Magnetic Resonance Imaging}, URL = {https://www-sop.inria.fr/asclepios/Publications/Arsigny/arsigny_wbir.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615607}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Arsigny:MFCA:06, OPTADDRESS = {}, AUTHOR = {Vincent Arsigny and Olivier Commowick and Xavier Pennec and Nicholas Ayache}, BOOKTITLE = {Proc. of the International Workshop on the Mathematical Foundations of Computational Anatomy (MFCA-2006)}, EDITOR = {X. Pennec and S. Joshi}, MONTH = {1st of October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {16-17}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Statistics on Diffeomorphisms in A Log-Euclidean Framework}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Non-rigid registration, Lie groups, Diffeomorphisms, Log-Euclidean metrics, Magnetic Resonance Imaging}, URL = {https://www-sop.inria.fr/asclepios/Publications/Arsigny/arsigny_mfca.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Audette:mmvr:2006, OPTADDRESS = {}, AUTHOR = {M. A. Audette and H. Delingette and A. Fuchs and O. Burgert and K. 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and Aymeric Perchant}, BOOKTITLE = {MICCAI Workshop on Microscopic Image Analysis with Applications in Biology (MIAAB'06)}, OPTEDITOR = {}, MONTH = {October}, NOTE = {Invited}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Processing and Mosaicing of Fibered Confocal Images}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Ayache/ExAbstractMIIAB06-Ayache-light.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615589}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Azar:ISBI:06, ADDRESS = {Crystal Gateway Marriott, Arlington, Virginia, USA}, AUTHOR = {Antoine Azar and Chenyang Xu and Xavier Pennec and Nicholas Ayache}, BOOKTITLE = {Proceedings of the IEEE International Symposium on Biomedical Imaging (ISBI 2006)}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {824--827}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {An interactive Intensity- and Feature-Based Non-Rigid Registration Framework for 3D Medical Images}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, DOI = {10.1109/ISBI.2006.1625045}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Spine, variability model, Riemannian geometry}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Azar.ISBI06.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615601}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Boisvert:IRSSD_model:06, OPTADDRESS = {}, AUTHOR = {Jonathan Boisvert and Farida Cheriet and Xavier Pennec and Nicholas Ayache and Hubert Labelle}, BOOKTITLE = {Research into Spinal Deformities}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {176--182}, OPTPUBLISHER = {}, SERIES = {Studies in Health Technology and Informatics}, TITLE = {A Novel Framework for the 3D Analysis of Spine Deformation Modes}, VOLUME = {123}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Boisvert.IRSSD_spine.pdf}, URL-PUBLISHER = {http://www.booksonline.iospress.nl/Content/View.aspx?piid=3635}, PMID = {17108423}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Boisvert:IRSSD_brace:06, OPTADDRESS = {}, AUTHOR = {Jonathan Boisvert and Farida Cheriet and Xavier Pennec and Nicholas Ayache and Hubert Labelle}, BOOKTITLE = {Research into Spinal Deformities}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {372--378}, OPTPUBLISHER = {}, SERIES = {Studies in Health Technology and Informatics}, TITLE = {Assessment of Brace Local Action on Vertebrae Relative Poses}, VOLUME = {123}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Boisvert.IRSSD_brace.pdf}, URL-PUBLISHER = {http://www.booksonline.iospress.nl/Content/View.aspx?piid=3670}, PMID = {17108454}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615609}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Boisvert:ISBI:06, ADDRESS = {Crystal Gateway Marriott, Arlington, Virginia, USA}, AUTHOR = {Jonathan Boisvert and Xavier Pennec and Nicholas Ayache and Hubert Labelle and Farida Cheriet}, BOOKTITLE = {Proceedings of the IEEE International Symposium on Biomedical Imaging (ISBI 2006)}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {750--753}, PUBLISHER = {IEEE}, OPTSERIES = {}, TITLE = {3D Anatomic Variability Assesment of the Scoliotic Spine Using Statistics on Lie Groups}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, DOI = {10.1109/ISBI.2006.1625025}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Spine, variability model, Riemannian geometry}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Boisvert.ISBI06.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615602}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Boisvert:AMDO:06, OPTADDRESS = {}, AUTHOR = {Jonathan Boisvert and Xavier Pennec and Hubert Labelle and Farida Cheriet and Nicholas Ayache}, BOOKTITLE = {Proc of the IV Conference on Articulated Motion and Deformable Objects, Andratx, Mallorca, Spain, 11-14 July}, OPTEDITOR = {}, OPTMONTH = {}, NOTE = {AMDO best paper award 2006}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {346--355}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Principal Spine Shape Deformation Modes Using Riemannian Geometry and Articulated Models}, VOLUME = {4069}, YEAR = {2006}, OPTABSTRACT = {}, DOI = {10.1007/11789239_36}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Boisvert.AMDO06.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615592}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Chrisochoides:SC:06, ADDRESS = {Tampa, Florida, USA}, AUTHOR = {Nikos Chrisochoides and Andriy Fedorov and Andriy Kot and Neculai Archip and Peter Black and Olivier Clatz and Alexandra Golby and Ron Kikinis and Simon K. Warfield}, BOOKTITLE = {SuperComputing06}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Toward Real-Time, Image Guided Neurosurgery Using Distributed and Grid Computing}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Olivier.Clatz/chrisochoides_SC_06.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615612}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Chung:MICCAI:06, OPTADDRESS = {}, AUTHOR = {Desmond Chung and Mihaela Pop and Maxime Sermesant and Graham Wright}, BOOKTITLE = {MICCAI Workshop on Biophotonics Imaging for Diagnostics and Treatment}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {33-40}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Stereo Reconstruction of the Epicardium for Optical Fluorescence Imaging}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/MICCAI2006Chung.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615588}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Clatz:CMBBE:06, OPTADDRESS = {}, AUTHOR = {Olivier Clatz and Stéphane Lanteri and Serge Piperno}, BOOKTITLE = {7th International Symposium on Computer Methods in Biomechanics and Biomedical Engineering}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Unstructured mesh solvers for the simulation of electromagnetic wave propagation and induced temperature elevation in living tissues}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615586}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{colliot06:ISBI, OPTADDRESS = {}, AUTHOR = {O. Colliot and T. Mansi and P. Besson and N. Bernasconi and A. Bernasconi}, BOOKTITLE = {3rd IEEE International Symposium on Biomedical Imaging: Nano to Macro (ISBI)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {323-326}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Improved segmentation of focal cortical dysplasia lesions on MRI using expansion towards cortical boundaries}, OPTVOLUME = {}, YEAR = {2006}, ABSTRACT = {Focal cortical dysplasia (FCD), a malformation of cortical development, is an important cause of intractable epilepsy. On magnetic resonance images (MRI), FCD lesions are difficult to distinguish from healthy cortex and defining their spatial extent is challenging. We previously introduced a method to segment FCD lesions on MRI, relying on a 3D deformable model driven by MR features of FCD. In the present paper, we propose to improve our approach by adding a second evolution step which expands the result towards the cortical boundaries. A quantitative evaluation was performed in 18 FCD patients by comparison with manually traced lesion labels. The proposed approach achieved a strong agreement with the manual labels and substantially improved the results obtained with our previous method.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tommaso.Mansi/colliot06ISBI.pdf}, URL-PUBLISHER = {http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=1624918}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615584}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Commowick:ISBI:06, ADDRESS = {Crystal Gateway Marriott, Arlington, Virginia, USA}, AUTHOR = {Olivier Commowick and Vincent Arsigny and Jimena Costa and Nicholas Ayache and Grégoire Malandain}, BOOKTITLE = {Proceedings of the Third IEEE International Symposium on Biomedical Imaging (ISBI 2006)}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {478-481}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {An Efficient Locally Affine Framework for the Registration of Anatomical Structures}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Non-rigid registration, Multi-affine registration, Magnetic Resonance Imaging, Polyaffine transformations, Log-Euclidean metrics, Diffeomorphisms}, URL = {https://www-sop.inria.fr/asclepios/Publications/Commowick/CommowickIsbi2006.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615606}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Commowick:SA2PM:06, ADDRESS = {Copenhagen}, AUTHOR = {Olivier Commowick and Grégoire Malandain}, BOOKTITLE = {Proceedings of the SA2PM Workshop (From Statistical Atlases to Personalized Models)}, OPTEDITOR = {}, MONTH = {October}, NOTE = {held in conjunction with MICCAI 2006}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Evaluation of Atlas Construction Strategies in the Context of Radiotherapy Planning}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Non-rigid registration, Atlas, Head And Neck}, URL = {https://www-sop.inria.fr/asclepios/Publications/Commowick/CommowickMiccai2006.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615605}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Fillard:ISBI:06, ADDRESS = {Crystal Gateway Marriott, Arlington, Virginia, USA}, AUTHOR = {Pierre Fillard and Vincent Arsigny and Xavier Pennec and Nicholas Ayache}, BOOKTITLE = {Proceedings of the IEEE International Symposium on Biomedical Imaging (ISBI 2006)}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {786-789}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Clinical DT-MRI estimation, smoothing and fiber tracking with log-Euclidean metrics}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, DOI = {10.1109/ISBI.2006.1625034}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {DT-MRI, tensor estimation, Riemannian geometry, Log-Euclidean metrics}, URL = {https://www-sop.inria.fr/asclepios/Publications/Fillard/Fillard.ISBI.06.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615579}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{HeC:HealthGrid:06, ADDRESS = {Valancia, Spain}, AUTHOR = {J. Freund and D. Comaniciu and Y. Ioannis and P. Liu and R. McClatchey and E. Moley-Fletcher and X. Pennec and G. Pongiglione and X.S. Zhou}, BOOKTITLE = {Proc of Health-Grid 2006}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {259-270}, OPTPUBLISHER = {}, SERIES = {Studies in Health Technology and Informatics}, TITLE = {Health-e-Child: An Integrated Biomedical Platform for Grid-Based Pediatrics}, VOLUME = {120}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Health-e-Child_HG06.pdf}, OPTURL-PUBLISHER = {}, PMID = {16823144}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615591}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Glatard:GELA:06, OPTADDRESS = {}, AUTHOR = {Tristan Glatard and David Emsellem and Johan Montagnat}, BOOKTITLE = {Grid-Enabling Legacy Applications and Supporting End Users Workshop (GELA'06), Paris, France, June 19-23}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Generic web service wrapper for efficient embedding of legacy codes in service-based workflows}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.i3s.unice.fr/~johan/publis/GELA06.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.archives-ouvertes.fr/hal-00683196}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Glatard:EXPGRID:06, OPTADDRESS = {}, AUTHOR = {Tristan Glatard and Johan Montagnat and Xavier Pennec}, BOOKTITLE = {Proc of the Workshop on Experimental Grid testbeds for the assessment of large-scale distributed applications and tools (EXPGRID'06), Paris, France, June 19-23}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {An experimental comparison of Grid5000 clusters and the EGEE grid}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.i3s.unice.fr/~johan/publis/EXPGRID06.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.archives-ouvertes.fr/hal-00683199}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Glatard:HPDC:06, OPTADDRESS = {}, AUTHOR = {Tristan Glatard and Johan Montagnat and Xavier Pennec}, BOOKTITLE = {Proceedings of the IEEE International Symposium on High Performance Distributed Computing (HPDC'06), Paris, France, June 19}, EDITOR = { IEEE}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IEEE}, PAGES = {333--334}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Efficient services composition for grid-enabled data-intensive applications}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, DOI = {10.1109/HPDC.2006.1652170}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.i3s.unice.fr/~johan/publis/HPDC06.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.archives-ouvertes.fr/hal-00683201}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Glatard:HealthGrid:06, OPTADDRESS = {}, AUTHOR = {Tristan Glatard and Johan Montagnat and Xavier Pennec}, BOOKTITLE = {Proc. of the HealthGrid conference (HealthGrid'06), Valencia, Spain, June 7-9}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {93--103}, OPTPUBLISHER = {}, SERIES = {Studies in Health Technology and Informatics}, TITLE = {Medical image registration algorithms assessment: Bronze Standard application enactment on grids using the MOTEUR workflow engine}, VOLUME = {120}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.i3s.unice.fr/~johan/publis/HealthGrid06b.pdf}, OPTURL-PUBLISHER = {}, PMID = {16823126}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.archives-ouvertes.fr/hal-00683188}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Glatard:PDP:2006, ADDRESS = {Montbéliard-Sochaux}, AUTHOR = {Tristan Glatard and Johan Montagnat and Xavier Pennec}, BOOKTITLE = {14th euromicro conference on Parallel, Distributed and network-based Processing (PDP06)}, OPTEDITOR = {}, MONTH = {February}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {231-238}, PUBLISHER = {IEEE}, OPTSERIES = {}, TITLE = {Probabilistic and dynamic optimization of job partitioning on a grid infrastructure}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, DOI = {10.1109/PDP.2006.61}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.i3s.unice.fr/~johan/publis/PDP06.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.archives-ouvertes.fr/hal-00683203}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Glatard:MICCAI:06, OPTADDRESS = {}, AUTHOR = {Tristan Glatard and Xavier Pennec and Johan Montagnat}, BOOKTITLE = {Proc. of the 9th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI'06), Part II}, OPTEDITOR = {}, MONTH = {2-4 October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {152--160}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Performance evaluation of grid-enabled registration algorithms using bronze-standards}, VOLUME = {4191}, YEAR = {2006}, OPTABSTRACT = {}, DOI = {10.1007/11866763_19}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Glatard.MICCAI06.pdf}, OPTURL-PUBLISHER = {}, PMID = {17354767}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.archives-ouvertes.fr/hal-00683176}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Konukoglu:MICCAI:06, OPTADDRESS = {}, AUTHOR = {Ender Konukoglu and Olivier Clatz and Pierre-Yves Bondiau and Hervé Delingette and Nicholas Ayache}, BOOKTITLE = {Proc. of the 9th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI'06), Part I}, OPTEDITOR = {}, MONTH = {2-4 October}, OPTNOTE = {}, NUMBER = {4190}, OPTORGANIZATION = {}, PAGES = {338--346}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Extrapolating Tumor Invasion Margins for Physiologically Determined Radiotherapy Regions}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Tumor growth modeling, Glioma, brain tumors, radiotherapy, hamilton jacobi, DT-MRI, DTI, Diffusion Tensor, fisher kolmogorov, F-KPP}, URL = {https://www-sop.inria.fr/asclepios/Publications/Ender.Konukoglu/41900338.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615595}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Linguraru:SPIE:06, OPTADDRESS = {}, AUTHOR = {M.G. Linguraru and R.D. Howe}, BOOKTITLE = {SPIE Medical Imaging '06}, EDITOR = {E.L. Siegel and E. Krupinski and M. Sonka}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {SPIE Publishing}, OPTSERIES = {}, TITLE = {Texture-based Segmentation of Instruments in 3D Ultrasound}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Linguraru/Linguraru_SPIE_2006.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Linguraru:MICCAI:2006, OPTADDRESS = {}, AUTHOR = {M.G. Linguraru and N.V. Vasilyev and del Nido, P.J. and R.D. Howe}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention - MICCAI'06}, EDITOR = {R. Larsen and M. Nielsen and M. Sporring}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {596-603}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Atrial Septal Defect Tracking in 3D Cardiac Ultrasound}, VOLUME = {4190}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Linguraru/Linguraru_MICCAI_2006.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Montagnat:WORKS:06, ADDRESS = {Paris, France}, AUTHOR = {Johan Montagnat and Tristan Glatard and Diane Lingrand}, BOOKTITLE = {Workshop on Workflows in Support of Large-Scale Science (WORKS'06)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Data composition patterns in service-based workflows}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.i3s.unice.fr/~johan/publis/WORKS06.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.archives-ouvertes.fr/hal-00683193}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pennec:MFCA:06, ADDRESS = {Copenhagen, Danemark}, AUTHOR = {Xavier Pennec}, BOOKTITLE = {1st MICCAI Workshop on Mathematical Foundations of Computational Anatomy: Geometrical, Statistical and Registration Methods for Modeling Biological Shape Variability}, EDITOR = {Xavier Pennec and Sarang Joshi}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1-13}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Left-Invariant Riemannian Elasticity: a distance on shape diffeomorphisms ?}, OPTVOLUME = {}, YEAR = {2006}, ABSTRACT = {In inter-subject registration, one often lacks a good model of the transformation variability to choose the optimal regularization. Some works attempt to model the variability in a statistical way, but the re-introduction in a registration algorithm is not easy. In [1], we interpreted the elastic energy as the distance of the Green-St Venant strain tensor to the identity. By changing the Euclidean metric for a more suitable Riemannian one, we defined a consistent statistical framework to quantify the amount of deformation. In particular, the mean and the covariance matrix of the strain tensor could be efficiently computed from a population of non-linear transformations and introduced as parameters in a Mahalanobis distance to measure the statistical deviation from the observed variability. This statistical Riemannian elasticity was able to handle anisotropic deformations but its isotropic stationary version was locally inverse-consistent. In this paper, we investigate how to modify the Riemannian elasticity to make it globally inverse consistent. This allows to define a left-invariant "distance" between shape diffeomorphisms that we call the left-invariant Riemannian elasticity. Such a closed form energy on diffeomorphisms can optimize it directly without relying on a time and memory consuming numerical optimization of the geodesic path.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {http://hal.inria.fr/inria-00634098/PDF/Pennec_MFCA06.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00634098}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Peyrat:MICCAI:06, OPTADDRESS = {}, AUTHOR = {Jean-Marc Peyrat and Maxime Sermesant and Hervé Delingette and Xavier Pennec and Chenyang Xu and Elliot McVeigh and Nicholas Ayache}, BOOKTITLE = {Proc. of the 9th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI'06), Part I}, OPTEDITOR = {}, MONTH = {2-4 October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {297--304}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Towards a Statistical Atlas of Cardiac Fiber Structure}, VOLUME = {4190}, YEAR = {2006}, OPTABSTRACT = {}, DOI = {10.1007/11866565_37}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {DT-MRI, DTI, Diffusion Tensor, Log-Euclidean, Cardiac Fiber, Heart, Myocardium, Atlas}, URL = {https://www-sop.inria.fr/asclepios/Publications/Peyrat/Peyrat_MICCAI_2006.pdf}, OPTURL-PUBLISHER = {}, PMID = {17354903}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615596}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pop:ISBI:06, OPTADDRESS = {}, AUTHOR = {Mihaela Pop and Maxime Sermesant and Yves Coudière and J. Graham and M. Bronskill and A. Dick and Graham Wright}, BOOKTITLE = {3rd IEEE International Symposium on Biomedical Imaging: Macro to Nano (ISBI'06)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {33-36}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A theoretical model of ventricular reentry and its radiofrequency ablation therapy}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615583}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pop:Cardiostim:06a, OPTADDRESS = {}, AUTHOR = {Mihaela Pop and Maxime Sermesant and Alexander Dick and John Graham and Yves Coudière and Graham Wright}, BOOKTITLE = {15th World Congress in Cardiac Electrophysiology and Cardiac Techniques (Cardiostim'06)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Aid of Computer Modelling to Identify Ventricular Reentries due to Infarct Scars}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615581}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pop:Cardiostim:06b, OPTADDRESS = {}, AUTHOR = {Mihaela Pop and Maxime Sermesant and Alexander Dick and John Graham and Yves Coudière and Graham Wright}, BOOKTITLE = {15th World Congress in Cardiac Electrophysiology and Cardiac Techniques (Cardiostim'06)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Assessment of Radio-frequency Ablation of Ventricular Arrhythmias Via Magnetic Resonance Imaging and Computer Modelling}, OPTVOLUME = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615582}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Arsigny:MICCAI:05, ADDRESS = {Palm Springs, CA, USA, October 26-29}, AUTHOR = {Vincent Arsigny and Pierre Fillard and Xavier Pennec and Nicholas Ayache}, BOOKTITLE = {Proceedings of the 8th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2005, Part I}, EDITOR = {J. Duncan and G. Gerig}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {115-122}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Fast and Simple Calculus on Tensors in the Log-Euclidean Framework}, VOLUME = {3749}, YEAR = {2005}, OPTABSTRACT = {}, DOI = {10.1007/11566465_15}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {DT-MRI, Magnetic Resonance Imaging, Tensors, brain, Riemannian geometry, Lie group, regularization, interpolation, Log-Euclidean metrics}, URL = {https://www-sop.inria.fr/asclepios/Publications/Arsigny/arsigny_miccai05.pdf}, URL-PUBLISHER = {http://springerlink.metapress.com/openurl.asp?genre=article&issn=0302-9743&volume=3749&spage=115}, PMID = {16685836}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00502669/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Audette:cvbia:2005, ADDRESS = {Beijing, China}, AUTHOR = {M. A. Audette and H. Delingette and A. Fuchs and O. Burgert and K. Chinzei}, BOOKTITLE = {Computer Vision for Biomedical Image Applications (CVBIA)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {178-188}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {A topologically faithful, tissue-guided, spatially varying meshing strategy for computing patient-specific head models for endoscopic pituitary surgery simulation}, OPTVOLUME = {}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615611}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{bardinet:miccai:2005, ADDRESS = {Palm Springs, California}, AUTHOR = {Eric Bardinet and Didier Dormont and Grégoire Malandain and Manik Bhattacharjee and Bernard Pidoux and Christian Saleh and Philippe Cornu and Nicholas Ayache and Yves Agid and Jérôme Yelnik}, BOOKTITLE = {Proceedings of MICCAI'05}, EDITOR = {J. Duncan and G. Gerig}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {385--393}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Retrospective cross-evaluation of an histological and deformable 3D atlas of the basal ganglia on series of Parkinsonian patients treated by deep brain stimulation (DBS)}, VOLUME = {3750}, YEAR = {2005}, OPTABSTRACT = {}, DOI = {10.1007/11566489_48}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/bardinet-miccai-2005.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616005}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{bricault:sur:2005, ADDRESS = {Chambéry}, AUTHOR = {Ivan Bricault and Simon DiMaio and Olivier Clatz and Sonia Pujol and Kirby Vosburgh and Ron Kikinis}, BOOKTITLE = {Surgetica}, OPTEDITOR = {}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Computer-Assisted Interventions on liver: Feasibility of the anchor needle technique for real-time targeting of lesions with respiratory motion}, OPTVOLUME = {}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Clatz/Bricault_Surgetica.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616014}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{charnoz:miccai:2005, ADDRESS = {Palm Springs, California}, AUTHOR = {Arnaud Charnoz and Vincent Agnus and Grégoire Malandain and Clément Forest and Mohamed Tajine and Luc Soler}, BOOKTITLE = {Proceedings of MICCAI'05}, EDITOR = {J. Duncan and G. Gerig}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {155--162}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Liver registration for the follow-up of hepatic tumors}, VOLUME = {3750}, YEAR = {2005}, OPTABSTRACT = {}, DOI = {10.1007/11566489_20}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616006}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{charnoz:gbr:2005, OPTADDRESS = {}, AUTHOR = {Arnaud Charnoz and Vincent Agnus and Grégoire Malandain and Luc Soler and Mohamed Tajine}, BOOKTITLE = {Graph-Based Representations in Pattern Recognition}, EDITOR = {Luc Brun and Mario Vento}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {183--192}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Tree Matching Applied to Vascular System}, VOLUME = {3434}, YEAR = {2005}, OPTABSTRACT = {}, DOI = {10.1007/b107037}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/charnoz-gbr-2005.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615996}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{charnoz:ipmi:2005, ADDRESS = {Glenwood springs, Colorado, USA}, AUTHOR = {Arnaud Charnoz and Vincent Agnus and Grégoire Malandain and Luc Soler and Mohamed Tajine}, BOOKTITLE = {Proc. of Information Processing in Medical Imaging 2005 (IPMI'05)}, EDITOR = {Gary Christensen and Milan Sonka}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {443--455}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Vascular system matching validated on the liver}, VOLUME = {3565}, YEAR = {2005}, OPTABSTRACT = {}, DOI = {10.1007/11505730_37}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/charnoz-ipmi-2005.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Clatz:cfm:2005, ADDRESS = {Troyes}, AUTHOR = {Olivier Clatz and Pierre-Yves Bondiau and Hervé Delingette and Nicholas Ayache}, BOOKTITLE = {Congrès Français de Mécanique (CFM)}, OPTEDITOR = {}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Modélisation macroscopique de la croissance des tumeurs cérébrales}, OPTVOLUME = {}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Clatz/cfm2005_clatz.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Clatz:MICCAI:05, OPTADDRESS = {}, AUTHOR = {Olivier Clatz and Hervé Delingette and Ion-Florin Talos and Alexandra J. Golby and Nicholas Ayache and Ron Kikinis and Ferenc A. Jolesz and Simon K. Warfield}, BOOKTITLE = {Proceedings of MICCAI'05}, EDITOR = {J. Duncan and G. Gerig}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {295--302}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Hybrid Formulation of the Model-Based Non-Rigid Registration Problem to Improve Accuracy and Robustness}, VOLUME = {3750}, YEAR = {2005}, OPTABSTRACT = {}, DOI = {10.1007/11566489_37}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Clatz/MICCAI_2005_clatz.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616007}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{colliot05:MIUA, OPTADDRESS = {}, AUTHOR = {O. Colliot and T. Mansi and N. Bernasconi and V. Naessens and D. Klironomos and A. Bernasconi}, BOOKTITLE = {Medical Image Understanding and Analysis (MIUA)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {239-242}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A level set driven by MR features of focal cortical dysplasia for lesion segmentation}, OPTVOLUME = {}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tommaso.Mansi/colliot05MIUA.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616016}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{colliot05:MICCAI, ADDRESS = {Palm Springs (CA), USA}, AUTHOR = {O. Colliot and T. Mansi and N. Bernasconi and V. Naessens and D. Klironomos and A. Bernasconi}, BOOKTITLE = {Proc. Medical Image Computing and Computer Assisted Intervention (MICCAI'05)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {375-382}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Segmentation of Focal Cortical Dysplasia Lesions Using a Feature-Based Level Set}, VOLUME = {3749}, YEAR = {2005}, ABSTRACT = {Focal cortical dysplasia (FCD), a malformation of cortical development, is an important cause of medically intractable epilepsy. FCD lesions are difficult to distinguish from non-lesional cortex and their delineation on MRI is a challenging task. This paper presents a method to segment FCD lesions on T1-weighted MRI, based on a 3D deformable model, implemented using the level set framework. The deformable model is driven by three MRI features: cortical thickness, relative intensity and gradient. These features correspond to the visual characteristics of FCD and allow to differentiate lesions from normal tissues. The proposed method was tested on 18 patients with FCD and its performance was quantitatively evaluated by comparison with the manual tracings of two trained raters. The validation showed that the similarity between the level set segmentation and the manual labels is similar to the agreement between the two human raters. This new approach may become a useful tool for the presurgical evaluation of patients with intractable epilepsy.}, DOI = {10.1007/11566465_47}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tommaso.Mansi/colliot05MICCAI.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616015}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Commowick:MICCAI:05, ADDRESS = {Palm Springs, CA, USA, October 26-29}, ANNOTE = {Erratum: The tensor $W_j$ should be defined as $W_j = J^T.J$ and not as $W_j = J.J^T$.}, AUTHOR = {Olivier Commowick and Radu Stefanescu and Pierre Fillard and Vincent Arsigny and Nicholas Ayache and Xavier Pennec and Grégoire Malandain}, BOOKTITLE = {Proceedings of the 8th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2005, Part II}, EDITOR = {J. Duncan and G. Gerig}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {927--934}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Incorporating Statistical Measures of Anatomical Variability in Atlas-to-Subject Registration for Conformal Brain Radiotherapy}, VOLUME = {3750}, YEAR = {2005}, OPTABSTRACT = {}, DOI = {10.1007/11566489_114}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, brain, Brain Stem, statistics, validation, Tensors}, URL = {https://www-sop.inria.fr/asclepios/Publications/Commowick/CommowickMiccai05.pdf}, URL-PUBLISHER = {http://springerlink.metapress.com/openurl.asp?genre=article&issn=0302-9743&volume=3750&spage=927}, PMID = {16686049}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00502673/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Fillard:DSSCV:05, OPTADDRESS = {}, AUTHOR = {Pierre Fillard and Vincent Arsigny and Nicholas Ayache and Xavier Pennec}, BOOKTITLE = {Deep Structure, Singularities, and Computer Vision (DSSCV)}, EDITOR = {Ole Fogh Olsen and Luc Florak and Arjan Kuijper}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {112--123}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {A Riemannian Framework for the Processing of Tensor-Valued Images}, OPTVOLUME = {}, YEAR = {2005}, OPTABSTRACT = {}, DOI = {10.1007/11577812_10}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Tensors, Riemannian geometry, Structure tensors, regularization}, URL = {https://www-sop.inria.fr/asclepios/Publications/Fillard/Fillard.DSSCV05.pdf}, URL-PUBLISHER = {www.springerlink.com/openurl.asp?genre=article&issn=0302-9743&volume=3753&spage=112}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615994}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Fillard:IPMI:05, ADDRESS = {Glenwood springs, Colorado, USA}, AUTHOR = {Pierre Fillard and Vincent Arsigny and Xavier Pennec and Paul M. 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Gaudeau and Tristan Glatard and Emmanuel Jeannot and Yannick Legré and Charles Loomis and Johan Montagnat and Jean-Marie Moureau and Angel Osorio and Xavier Pennec and Romain Texier}, BOOKTITLE = {proceedings of the IEEE/ACM International Symposium on Cluster Computing and the Grid (CCGRID'05)}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {487-495}, PUBLISHER = {IEEE}, OPTSERIES = {}, TITLE = {Grid-enabling medical image analysis}, VOLUME = {1}, YEAR = {2005}, OPTABSTRACT = {}, DOI = {10.1109/CCGRID.2005.1558593}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.i3s.unice.fr/~johan/publis/Biogrid05.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00174284}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Glatard:CBMS:2005, OPTADDRESS = {}, AUTHOR = {Tristan Glatard and Johan Montagnat and Xavier Pennec}, BOOKTITLE = {Proc. 18th IEEE Symp. on Computer Based Medical Systems (CBMS'05), Dublin, Ireland, June 23-24}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {537-542}, PUBLISHER = {IEEE}, OPTSERIES = {}, TITLE = {Grid-enabled workflows for data intensive applications}, OPTVOLUME = {}, YEAR = {2005}, OPTABSTRACT = {}, DOI = {10.1109/CBMS.2005.61}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {www.i3s.unice.fr/~johan/publis/CBMS05.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:SPIE:05, OPTADDRESS = {}, AUTHOR = {González Ballester, M. A. and M.G. Linguraru and Reyes Aguirre, M. and N. Ayache}, BOOKTITLE = {SPIE Medical Imaging '05}, EDITOR = {J.M. Fitzpatrick and J.M. Reinhardt}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1392--1399}, PUBLISHER = {SPIE Publishing}, OPTSERIES = {}, TITLE = {On the Adequacy of Principal Factor Analysis for the Study of Shape Variability}, VOLUME = {5747}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gonzalez/Gonzalez_SPIE_2005.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616012}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Haik:PRIONS:2005, OPTADDRESS = {}, AUTHOR = {S. Haïk and D. Galanaud and B.A. Faucheux and N. Privat and I. 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Brandel}, BOOKTITLE = {II International Symposium on The New Prion Biology: Basic Science, Diagnosis and Therapy}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Early diagnosis of human TSE by multimodality MRI: Spectroscopic detection of thalamic gliosis in a patient with FFI and normal FLAIR and diffusion-weighted imaging}, OPTVOLUME = {}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/ISTNPB2005.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616010}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{hufnagel:bvm:2005, ADDRESS = {Heidelberg, Germany}, AUTHOR = {Heike Hufnagel and Xavier Pennec and Grégoire Malandain and Hans Handels and Nicholas Ayache}, BOOKTITLE = {Bildverarbeitung fuer die Medizin 2005}, OPTEDITOR = {}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {Deutsches Krebsforschungszentrum}, PAGES = {325-329}, PUBLISHER = {Springer}, SERIES = {Informatik aktuell}, TITLE = {Non-Linear 2D and 3D Registration Using Block-Matching and B-Splines}, OPTVOLUME = {}, YEAR = {2005}, OPTABSTRACT = {}, DOI = {10.1007/3-540-26431-0_67}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Heike.Hufnagel/huf_bvm05.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615991}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Linguraru:MICCAI:2005, ADDRESS = {Palm Springs, USA}, AUTHOR = {M.G. Linguraru and N. Ayache and M.A. González Ballester and E. Bardinet and D. Galanaud and S. Haïk and B.A. Faucheux and P. Cozzone and D. Dormont and J.P. Brandel}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention, MICCAI 2005}, EDITOR = {J. Duncan and G. 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Howe}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention, MICCAI 2005}, OPTEDITOR = {}, OPTMONTH = {}, NOTE = {short paper}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Enhancement of Instrument Appearance in Ultrasound Images by Distribution and Spatial Analysis}, OPTVOLUME = {}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Linguraru:EMBC:2005, ADDRESS = {Shanghai, China}, AUTHOR = {K. Marias and M.G. Linguraru and M.A. González Ballester and S. Petroudi and M. Tsiknakis and J.M. Brady}, BOOKTITLE = {Proceedings of 27th IEEE Engineering in Medicine and Biology Society (EMBS) Annual International Conference}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, SERIES = {IEEE}, TITLE = {Automatic Labelling and BI-RADS Characterisation of Mammogram Densities}, OPTVOLUME = {}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Linguraru/Linguraru_EMBC_2005.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Moreau:FIMH05, OPTADDRESS = {}, AUTHOR = {Valérie Moreau-Villéger and Hervé Delingette and Maxime Sermesant and Hiroshi Ashikaga and Owen Faris and Elliot McVeigh and Nicholas Ayache}, BOOKTITLE = {Proc. of Functional Imaging and Modeling of the Heart 2005 (FIMH'O5)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {256-266}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Estimating Local Apparent Conductivity with a 2-D Electrophysiological Model of the Heart}, VOLUME = {3504}, YEAR = {2005}, OPTABSTRACT = {}, DOI = {10.1007/11494621_26}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Moreau/moreauFimh05.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616001}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Nicolau:MICCAI:05, ADDRESS = {Palm Springs, CA, USA, October 26-29}, AUTHOR = {Stéphane Nicolau and Xavier Pennec and Luc Soler and Nicholas Ayache}, BOOKTITLE = {Proceedings of the 8th Int. 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Gerig}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {539--547}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {A complete Augmented Reality Guidance System for Liver Punctures: First Clinical Evaluation}, VOLUME = {3749}, YEAR = {2005}, OPTABSTRACT = {}, DOI = {10.1007/11566465_67}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Nicolau.MICCAI05.pdf}, URL-PUBLISHER = {http://springerlink.metapress.com/openurl.asp?genre=article&issn=0302-9743&volume=3749&spage=539}, PMID = {16685888}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616011}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Linguraru:BMES:2005, ADDRESS = {Baltimore, USA}, AUTHOR = {P.M. Novotny and M.G. Linguraru and G. Marx and P. Del Nido and R.D. Howe}, BOOKTITLE = {Proceedings of Biomedical Engineering Society - BMES 2005}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1302}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Using Real-Time Three-Dimensional Ultrasound to Characterize Mitral Valve Motion}, OPTVOLUME = {}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Linguraru/Linguraru_BMES_2005.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pennec:MICCAI:05, ADDRESS = {Palm Springs, CA, USA, October 26-29}, AUTHOR = {Xavier Pennec and Radu Stefanescu and Vincent Arsigny and Pierre Fillard and Nicholas Ayache}, BOOKTITLE = {Proceedings of the 8th Int. 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Duncan and G. 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Razavi}, BOOKTITLE = {Proceedings of MICCAI'05}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {607--615}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {A Fast-Marching Approach to Cardiac Electrophysiology Simulation for XMR Interventional Imaging}, VOLUME = {3750}, YEAR = {2005}, OPTABSTRACT = {}, DOI = {10.1007/11566489_75}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/MICCAI2005Sermesant.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616008}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Sermesant:FIMH05, OPTADDRESS = {}, AUTHOR = {Maxime Sermesant and Philippe Moireau and Oscar Camara and Jacques Sainte-Marie and Rado Andriantsimiavona and Robert Cimrman and Derek L. G. Hill and Dominique Chapelle and Reza Razavi}, BOOKTITLE = {Proc. of Functional Imaging and Modeling of the Heart 2005 (FIMH'O5)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {325-337}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Cardiac Function Estimation from MRI Using a Heart Model and Data Assimilation: Advances and Difficulties}, VOLUME = {3504}, YEAR = {2005}, OPTABSTRACT = {}, DOI = {DOI:10.1007/11494621_26}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/SermesantFIMH2005.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Vercauteren:MICCAI:05, ADDRESS = {Palm Springs, CA, USA, October 26-29}, AUTHOR = {Tom Vercauteren and Aymeric Perchant and Xavier Pennec and Nicholas Ayache}, BOOKTITLE = {Proceedings of the 8th Int. 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USA}, AUTHOR = {Olivier Clatz and Hervé Delingette and Ion-Florin Talos and Alexandra Golby and Nicholas Ayache and Ron Kikinis and Ferenc Jolesz and Simon Warfield}, BOOKTITLE = {5th Interventional MRI Symposium}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Robust Nonrigid Registration to Capture Brain Shift from Intraoperative MRI}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Clatz/Interventional2004_clatz.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{dauguet:miccai:2004, ADDRESS = {Saint-Malo, France}, AUTHOR = {Julien Dauguet 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Christine Lebrun and Stéphane Chanalet and Caroline Bensa and Grégoire Malandain and Nicholas Ayache}, BOOKTITLE = {International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'04)}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IEEE}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Hierarchical Segmentation of Multiple Sclerosis Lesions in Multi-Sequence MRI}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis}, URL = {https://www-sop.inria.fr/asclepios/Publications/Dugas/Dugas_ISBI_2004.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{dugas:miccai:2004, ADDRESS = {Saint-Malo, France}, AUTHOR = {Guillaume Dugas-Phocion and González Ballester, Miguel Ángel and Grégoire Malandain and Christine Lebrun and Nicholas Ayache}, BOOKTITLE = {Proc. of MICCAI'04}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {26--33}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Improved EM-Based Tissue Segmentation and Partial Volume Effect Quantification in Multi-Sequence Brain MRI}, VOLUME = {3216}, YEAR = {2004}, OPTABSTRACT = {}, DOI = {10.1007/b100265}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis}, URL = {https://www-sop.inria.fr/asclepios/Publications/Dugas/Dugas_MICCAI_2004_final.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Flandin:HBM:04, ADDRESS = {Budapest, Hungary}, AUTHOR = {Guillaume Flandin and Xavier Pennec and Alexis Roche and Will Penny and Nicholas Ayache and Jean-Baptiste Poline}, BOOKTITLE = {NeuroImage (HBM'04)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Multi-subject anatomo-functional classification for activation studies}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.meetingassistant.com/ohbm/FORMATTED/CategoryAbstracts/1243.html}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Forest:ISMS:04, OPTADDRESS = {}, AUTHOR = {Clément Forest and Hervé Delingette and Nicholas Ayache}, BOOKTITLE = {International Symposium on Medical Simulation}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Surface Contact and Reaction Force Models for Laparoscopic Simulation}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Forest/ISMS04Forest.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{fouard:isbi:2004, ADDRESS = {Arlington, VA, USA}, AUTHOR = {Céline Fouard and Grégoire Malandain and Stefen Prohaska and Malte Westerhoff and Francis Cassot and Christophe Mazel and Didier Asselot and Jean-Pierre Marc-Vergnes}, BOOKTITLE = {International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'04)}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IEEE}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Skeletonization by blocks for large datasets: application to brain microcirculation}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Fouard/Fouard_et_al_ISBI_2004.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Fouard:RFIA:2004, ADDRESS = {Toulouse, France}, AUTHOR = {Céline Fouard and Grégoire Malandain and Stefen Prohaska and Malte Westerhoff and Francis Cassot and Christophe Mazel and Didier Asselot and Jean-Pierre Marc-Vergnes}, BOOKTITLE = {Proc. of RFIA'04}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Squelettisation par blocs pour des grands volumes de données 3D: application à la microcirculation cérébrale}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {skeletonisation, large datasets}, URL = {https://www-sop.inria.fr/asclepios/Publications/Fouard/Fouard_et_al_RFIA_2004.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Linguraru:GIS:04:2, OPTADDRESS = {}, AUTHOR = {D. Galanaud and M.G. Linguraru and S. Haïk and D. Dormont and E. Bardinet and B. Faucheaux and P. Cozzone and N. Ayache and J.P. Brandel}, BOOKTITLE = {Congrès du G.I.S. Infections à Prions}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {26}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Intérêt de l'IRM Multimodalitaire dand le Diagnostic des Maladies à Prions}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{IMM2004-02373, OPTADDRESS = {}, AUTHOR = {K. B. Hilger and R. R. Paulsen and R. Larsen}, BOOKTITLE = {SPIE - Medical Imaging (to appear)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Markov Random Field Restoration of Point Correspondences for Active Shape Modelling}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Bayesian statistics, Markov Random Field restoration, 3D statistical shape model, Point Correspondence, Thin Plate Spline Warping, Leave-one-out parameter estimation, Surface Curvature}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Hill:HealthGrid:04, ADDRESS = {Clermont-Ferrand}, AUTHOR = {Derek Hill and Xavier Pennec and Michael Burns and Michael Parkin and Jo Hajnal and Radu Stefanescu and Daniel Rueckert and Johan Montagnat}, BOOKTITLE = {Proc. of HealthGrid 2004}, OPTEDITOR = {}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {European Commission, DG Information Society}, OPTSERIES = {}, TITLE = {Intraoperable Medical Image Registration Grid Service}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, real time, parallelism}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Hill.Pennec.HealthGrid2004.pdf}, URL-PUBLISHER = {http://clermont2004.healthgrid.org}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{kolesik:fspm:2004, ADDRESS = {Montpellier, France}, AUTHOR = {P. Kolesik and C. Fouard and S. Prohaska and A. McNeill}, BOOKTITLE = {4th International Workshop on Functional-Structural Plant Models}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {27}, PUBLISHER = {UMR AMAP/CIRAD}, OPTSERIES = {}, TITLE = {Automated method for non-destructive 3D visualisation of plant root architecture using X-ray tomography}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Fouard/4thFSPM04_S1Kolesik.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{legoualher:miccai:2004, ADDRESS = {Saint-Malo, France}, AUTHOR = {Le Goualher, Georges and Aymeric Perchant and Magalie Genet and Charlotte Cave and Bertrand Viellerobe and Frederic Berier and Benjamin Abrat and Nicholas Ayache}, BOOKTITLE = {Proc. of MICCAI'04}, EDITOR = {Christian Barillot and David Haynor and Pierre Hellier}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {761--768}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Towards Optical Biopsies with an Integrated Fibered Confocal Fluorescence Microscope}, VOLUME = {3217}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Misc/legoualher-miccai-2004.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Linguraru:GIS:04:1, OPTADDRESS = {}, AUTHOR = {M.G. Linguraru and N. Ayache and E. Bardinet and González Ballester, M.A. and D. Galanaud and S. Haïk and B. Faucheaux and J.J. Hauw and J. Chiras and P. Cozzone and D. Dormont and J.P. Brandel}, BOOKTITLE = {Congrès du G.I.S. Infections à Prions}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {25}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Détection et Quantification Automatique des Hypersignaux en IRM dans la Maladie de Creutzfeldt-Jakob}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Linguraru:MICCAI:04, OPTADDRESS = {}, AUTHOR = {M.G. Linguraru and M. Brady and R. English}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention MICCAI'04}, EDITOR = {Barillot, C.and Haynor, D.R. and P. Hellier}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {813-820}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Foveal Algorithm for the Detection of Microcalcification Clusters: a FROC Analysis}, VOLUME = {3217}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Linguraru/Linguraru_MICCAI_2004.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Muthurangu:ISMRM:04, OPTADDRESS = {}, AUTHOR = {V. Muthurangu and M. Sermesant and A. Taylor and D. Hill and R. Razavi}, BOOKTITLE = {International Society for Magnetic Resonance in Medicine Scientific Meeting}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {559}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A Novel Non-Invasive Method of Pulmonary Vascular Resistence Quantification}, VOLUME = {7}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Nicolau:ECCV:04, ADDRESS = {Prague}, AUTHOR = {Stéphane Nicolau and Xavier Pennec and Luc Soler and Nicholas Ayache}, BOOKTITLE = {Proc. of the 8th European Conference on Computer Vision (ECCV 04), Part III}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {79--91}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {An Accuracy Certified Augmented Reality System for Therapy Guidance}, VOLUME = {3023}, YEAR = {2004}, OPTABSTRACT = {}, DOI = {10.1007/b97871}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Augmented reality, 3D/2D registration, uncertainty, validation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Nicolau_ECCV04.pdf}, URL-PUBLISHER = {http://link.springer.de/link/service/series/0558/bibs/3023/30230079.htm}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Nicolau:AMIARCS:04, OPTADDRESS = {}, AUTHOR = {Stéphane Nicolau and Xavier Pennec and Luc Soler and Nicholas Ayache}, BOOKTITLE = {Workshop AMI-ARCS 2004 held in conjunction with MICCAI'04}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IRISA Rennes}, PAGES = {77--86}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {An Augmented Reality System to Guide Liver Punctures}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://ami2004.loria.fr/}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Nicolau:MIAR:2004, ADDRESS = {Beijing, China}, AUTHOR = {Stéphane Nicolau and Jérôme Schmid and Xavier Pennec and Luc Soler and Nicholas Ayache}, BOOKTITLE = {Proc of the Second Int. Workshop on Medical Imaging and Augmented Reality MIAR 2004}, EDITOR = {Guang-Zhong Yang and Tianzi Jiang}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {302--310}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {An Augmented Reality and Virtuality Interface for a Puncture Guidance System: Design and Validation on an Abdominal Phantom}, VOLUME = {3150}, YEAR = {2004}, OPTABSTRACT = {}, DOI = {10.1007/b99698}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Nicolau_MIAR04.pdf}, URL-PUBLISHER = {http://springerlink.metapress.com/openurl.asp?genre=article&issn=0302-9743&volume=3150&spage=302}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00875246}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{IMM2004-02376, OPTADDRESS = {}, AUTHOR = {R. R. Paulsen and C. Nielsen and S. Laugesen and R. Larsen}, BOOKTITLE = {SPIE - Medical Imaging (to appear)}, OPTEDITOR = {}, MONTH = {February}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, SERIES = {The International Society for Optical Engineering - Medical Imaging}, TITLE = {Using a Shape Model in the Design of Hearing Aids}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Human Ear Canal Anatomy, Hearing Aid Design, 3D Active Shape Model, Iterative Closest Points, Faceplate Placement}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Rhode:SPIE:04, OPTADDRESS = {}, AUTHOR = {K. Rhode and S. Hegde and M. Sermesant and D. Hill and R. Razavi and D. Rueckert and G. Sanchez-Ortiz}, BOOKTITLE = {SPIE Medical Imaging}, OPTEDITOR = {}, OPTMONTH = {}, NOTE = {to appear}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {XMR Guided Cardiac Electrophysiology Study and Radio Frequency Ablation}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{SanchezOrtiz:ISBI:04, ADDRESS = {Arlington, USA}, AUTHOR = {G.I. Sanchez-Ortiz and M. Sermesant and R. Chandrashekara and K.S. Rhode and R. Razavi and D.L.G. Hill and D. Rueckert}, BOOKTITLE = {Proceedings of IEEE International Symposium on Biomedical Imaging}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1055--1058}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Detecting the onset of myocardial contraction for establishing inverse electro-mechanical coupling in XMR guided RF ablation}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Savoire:ISBI:04, ADDRESS = {Arlington (USA)}, AUTHOR = {Nicolas Savoire and Le Goualher, Georges and Aymeric Perchant and François Lacombe and Grégoire Malandain and Nicholas Ayache}, BOOKTITLE = {Proc. ISBI'04}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {456--459}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Measuring Blood Cells Velocity In Microvessels From a Single Image: Application To In Vivo and In Situ Confocal Microscopy}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {RBC velocity, confocal microscopy}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/savoire-isbi-2004.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Sermesant:MICCAI:04, OPTADDRESS = {}, AUTHOR = {M. Sermesant and K. Rhode and A. Anjorin and S. Hegde and G. Sanchez-Ortiz and D. Rueckert and P. Lambiase and C. Bucknall and D. Hill and R. Razavi}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'04)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {786--794}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science (LNCS)}, TITLE = {Simulation of the Electromechanical Activity of the Heart using XMR Interventional Imaging}, VOLUME = {3217}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Sermesant:SCMR:04, OPTADDRESS = {}, AUTHOR = {M. Sermesant and K. Rhode and S. Hegde and G. Sanchez-Ortiz and D. Rueckert and P. Lambiase and C. Bucknall and D. Hill and R. Razavi}, BOOKTITLE = {Annual SCMR Scientific Sessions (SCMR'04)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Electromechanical Modelling of the Myocardium using XMR Interventional Imaging}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Sermesant:ISMRM:04, OPTADDRESS = {}, AUTHOR = {M. Sermesant and K. Rhode and S. Hegde and G. Sanchez-Ortiz and D. Rueckert and P. Lambiase and C. Bucknall and D. Hill and R. Razavi}, BOOKTITLE = {International Society for Magnetic Resonance in Medicine Scientific Meeting}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1890}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Modelling the Cardiac Electromechanical Activity for Integration of Electrophysiological Studies with MR}, VOLUME = {7}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Soler:MRNV:04, ADDRESS = {RheinAhrCampus Remagen, Germany}, AUTHOR = {Luc Soler and Nicholas Ayache and Stéphane Nicolau and Xavier Pennec and Clément Forest and Hervé Delingette and Didier Mutter and Jacques Marescaux}, BOOKTITLE = {Perspectives in Image-guided Surgery. Proceedings of the Scientific Workshop on Medical Robotics, Navigation and Visualization (MRNV) 2004}, EDITOR = {Th. M. Buzug and T. C. Lueth}, MONTH = {March 11-12}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {476--484}, PUBLISHER = {World Scientific}, OPTSERIES = {}, TITLE = {Virtual Reality, Augmented Reality and Robotics in surgical procedures of the liver}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/soler-mnvr-2004.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Nicolau:ISMAR:04, OPTADDRESS = {}, AUTHOR = {Luc Soler and Stéphane Nicolau and Jérôme Schmid and Christophe Koehl and Jacques Marescaux and Xavier Pennec and Nicholas Ayache}, BOOKTITLE = {Proc. of IEEE International Symposium on Mixed and Augmented Reality (ISMAR'04)}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {278--279}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Virtual Reality and Augmented Reality in Digestive Surgery}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, DOI = {10.1109/ISMAR.2004.64}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Nicolau_ISMAR04.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Stefanescu:MICCAI:04, ADDRESS = {Saint-Malo, France}, AUTHOR = {Radu Stefanescu and Olivier Commowick and Grégoire Malandain and Pierre-Yves Bondiau and Nicholas Ayache and Xavier Pennec}, BOOKTITLE = {Proc. of the 7th Int. Conf on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2004}, EDITOR = {C. Barillot and D.R. Haynor and P. Hellier}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {704--711}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Non-Rigid Atlas to Subject Registration with Pathologies for Conformal Brain Radiotherapy}, VOLUME = {3216}, YEAR = {2004}, OPTABSTRACT = {}, DOI = {10.1007/b100265}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, non-rigid, conformal radiotherapy, atlas, pathology}, URL = {https://www-sop.inria.fr/asclepios/Publications/Stefanescu/MICCAI04_paper.pdf}, URL-PUBLISHER = {http://springerlink.metapress.com/openurl.asp?genre=article&issn=0302-9743&volume=3216&spage=704}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Stefanescu:HealthGrid:04, ADDRESS = {Clermont-Ferrand}, AUTHOR = {Radu Stefanescu and Xavier Pennec and Nicholas Ayache}, BOOKTITLE = {Proc. of HealthGrid 2004}, OPTEDITOR = {}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {European Commission, DG Information Society}, OPTSERIES = {}, TITLE = {A Grid Service for the Interactive Use of a Parallel Non-Rigid Registration Algorithm}, OPTVOLUME = {}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, real time, parallelism}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Stefanescu.HealthGrid2004.pdf}, URL-PUBLISHER = {http://clermont2004.healthgrid.org}, PMID = {15924183}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{stoeckel:miccai:2004, ADDRESS = {Saint-Malo, France}, AUTHOR = {Jonathan Stoeckel and Nicholas Ayache and Grégoire Malandain and Pierre M. Koulibaly and Klaus P. Ebmeier and Jacques Darcourt}, BOOKTITLE = {Proc. of MICCAI'04}, EDITOR = {Christian Barillot and David Haynor and Pierre Hellier}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {654--662}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Automatic Classification of SPECT Images of Alzheimer's Disease Patients and Control Subjects}, VOLUME = {3217}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Stoeckel/stoeckel-miccai-2004.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pitiot:BrainMapping:03, OPTADDRESS = {}, AUTHOR = {J Annese and A. Pitiot and L.D. Dinov and A.W. Toga}, BOOKTITLE = {Human Brain Mapping HBM'03}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A myelo-architectonic method for the structural classification of cortical areas}, OPTVOLUME = {}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Arsigny:MICCAI:2003, ADDRESS = {Montreal}, AUTHOR = {Vincent Arsigny and Xavier Pennec and Nicholas Ayache}, BOOKTITLE = {Proc. of MICCAI'03, Part II}, EDITOR = {Randy E. Ellis and Terry M. Peters}, MONTH = {November}, NOTE = {MICCAI 2003 Best Student Award in Image Processing and Visualization. PMID: 15948656}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {829--837}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Polyrigid and Polyaffine Transformations: A New Class of Diffeomorphisms for Locally Rigid or Affine Registration}, VOLUME = {2879}, YEAR = {2003}, OPTABSTRACT = {}, DOI = {10.1007/b93811}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Arsigny_MICCAI03.pdf}, URL-PUBLISHER = {http://www.springerlink.com/openurl.asp?genre=article&issn=0302-9743&volume=2879&spage=829}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{audette:CARS:03, ADDRESS = {London (UK)}, AUTHOR = {M.A. Audette and H. Delingette and A. Fuchs and Y. Koseki and K. Chinzei}, BOOKTITLE = {Seventh Annual Conference of the International Society for Computer Aided Surgery (ISCAS'03)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A procedure for computing patient-specific anatomical models for finite element-based surgical simulation}, OPTVOLUME = {}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{blondel:cars:2003, ADDRESS = {Londres, United Kingdom}, AUTHOR = {C. Blondel and G. Malandain and R. Vaillant and N. Ayache}, BOOKTITLE = {Computer Assisted Radiology and Surgery 2003 Proceedings}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Elsevier}, SERIES = {ICS}, TITLE = {4D deformation field of coronary arteries from monoplane rotational X-ray angiography}, VOLUME = {1256}, YEAR = {2003}, OPTABSTRACT = {}, DOI = {10.1016/S0531-5131(03)00256-5}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{blondel:miccai:2003, ADDRESS = {Montreal, Canada}, AUTHOR = {C. Blondel and G. Malandain and R. Vaillant and F. Devernay and È. Coste-Manière and N. Ayache}, BOOKTITLE = {Medical image computing and computer-assisted intervention (MICCAI 2003)}, EDITOR = {Randy E. Ellis and Terry M. Peters}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {416--423}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {4D Tomographic Representation of Coronary Arteries From One Rotational X-ray Sequence}, VOLUME = {2878}, YEAR = {2003}, ABSTRACT = {We present a complete and fully automatic method to compute a tomographic 4D representation of coronary arteries from one single rotational monoplane X-ray sequence. The major steps of our method are the following: (1) images filtering, (2) arteries segmentation, (3) arteries matching and reconstruction, (4) parametric deformation field computation, and (5) deformation-compensated tomographic reconstruction. Steps (2) and (3) involve only a few frames, acquired at the same cardiac cycle phase, while the steps (1), (4), and (5) use the frames acquired at all cardiac cycle phases. This method has been successfully applied to 4 patient data sets. The 4D representation allows the visualization of coronary arteries anatomy from any point of view, and at any cardiac cycle time.}, DOI = {10.1007/b93810}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00262367/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{blondel:3D:2003, ADDRESS = {Saint-Malo, France}, AUTHOR = {C. Blondel and R. Vaillant and G. Malandain and N. Ayache}, BOOKTITLE = {Proceedings of the VIIth International Conference on Fully 3D Reconstruction In Radiology and Nuclear Medicine}, EDITOR = {Yves Bizais}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {3D tomographic reconstruction of coronary arteries using a precomputed 4D motion field}, OPTVOLUME = {}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Cathier:WBIR:03, ADDRESS = {Philadelphia, PA, USA}, AUTHOR = {P. Cathier and N. Ayache}, BOOKTITLE = {Second International Workshop on Biomedical Image Registration WBIR'03}, EDITOR = {J.C. Gee and J.B. A. Maintz and M. W. Vannier}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1--10}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {New Vector Field Regularization Techniques for Nonrigid Registration}, VOLUME = {2717}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, regularization}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Clatz:CFM:03, OPTADDRESS = {}, AUTHOR = {Olivier Clatz and Hervé Delingette and Eric Bardinet and Didier Dormont and Nicholas Ayache}, BOOKTITLE = {Congrès Français de Mécanique (CFM)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Détermination d'un modèle biomécanique du cerveau par l'analyse d'images : application à la maladie de Parkinson}, OPTVOLUME = {}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Clatz/cfm2003_clatz.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Clatz:IS4TM:03, ADDRESS = {Juan-les-Pins, France}, AUTHOR = {Olivier Clatz and Hervé Delingette and Eric Bardinet and Didier Dormont and Nicholas Ayache}, BOOKTITLE = {International Symposium on Surgery Simulation and Soft Tissue Modeling (IS4TM'03)}, EDITOR = {N. Ayache and H. Delingette}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {INRIA Sophia Antipolis}, PAGES = {321--331}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Patient Specific Biomechanical Model of the Brain: Application to Parkinson's disease procedure}, VOLUME = {2673}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Clatz/is4tm2002_clatz.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Dauguet:ISMRM:03, ADDRESS = {Toronto}, AUTHOR = {J. Dauguet and V. Frouin and Y. Cointepas and D. Hervé and N. Ayache and P. Hantraye}, BOOKTITLE = {Proc of Int. Soc. for Magnetic Resonance in Medicine (ISMRM) 11th Scientific meeting}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Robust segmentation of the thalamus using Kohonen algorithm from diffusion tensor image}, OPTVOLUME = {}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Dauguet/Dauguet_ISMRM_03.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delzescaux:miccai:2003, ADDRESS = {Montreal, Canada}, AUTHOR = {T. Delzescaux and J. Dauguet and F. Condé and R. Maroy and V. Frouin}, BOOKTITLE = {Medical image computing and computer-assisted intervention (MICCAI 2003)}, EDITOR = {Randy E. Ellis and Terry M. Peters}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {965--966}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Using 3D Non Rigid FFD-Based Method to Register post mortem 3D Histological Data and in vivo MRI of a Baboon Brain}, VOLUME = {2879}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Fillard:MICCAI:03b, OPTADDRESS = {}, AUTHOR = {P. Fillard and G. Gerig}, BOOKTITLE = {Proc. of MICCAI'03, Part II}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {967-968}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Analysis Tool For Diffusion Tensor MR}, VOLUME = {2879}, YEAR = {2003}, OPTABSTRACT = {}, DOI = {10.1007/978-3-540-39903-2_126}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00502755/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Fillard:MICCAI:03a, OPTADDRESS = {}, AUTHOR = {P. Fillard and J. Gilmore and W. Lin and J. Piven and G. Gerig}, BOOKTITLE = {Proc of MICCAI'03, Part I}, OPTEDITOR = {}, MONTH = {November}, NOTE = {MICCAI'03 Award: Best Student Paper in Image Analysis.}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {16-23}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Quantitative Analysis of White Matter Fiber Properties along Geodesic Paths}, VOLUME = {2879}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00502744/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Flandin:HBM:03a, ADDRESS = {New York, USA}, AUTHOR = {Guillaume Flandin and Will Penny and Xavier Pennec and Nicholas Ayache and Jean-Baptiste Poline}, BOOKTITLE = {NeuroImage (HBM'03)}, EDITOR = {Tomas Paus and Ed Bullmore and Jonathan D. Cohen}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Academic Press}, OPTSERIES = {}, TITLE = {A multisubject anatomo-functional parcellation of the brain}, OPTVOLUME = {}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {fMRI}, OPTURL = {}, URL-PUBLISHER = {http://208.164.121.55/hbm2003/abstract/abstract824.htm}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Fouard:DGCI:2003, ADDRESS = {Napoly, Italy}, AUTHOR = {Céline Fouard and Grégoire Malandain}, BOOKTITLE = {Proc. of DGCI'03}, EDITOR = {Ingela Nyström and di Baja, Gabriella Sanniti and Stina Svensson}, MONTH = {November}, OPTNOTE = {}, NUMBER = {2886}, OPTORGANIZATION = {}, PAGES = {214--223}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Systematized calculation of optimal coefficients of 3-D chamfer norms}, OPTVOLUME = {}, YEAR = {2003}, OPTABSTRACT = {}, DOI = {10.1007/b94107}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {chamfer mask, norm constraints anysotropic grid}, URL = {https://www-sop.inria.fr/asclepios/Publications/Fouard/Fouard_Malandain_DGCI_2003.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Fouard/Fouard_Malandain_DGCI_2003.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/hal-00308962/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:MICCAI:03, ADDRESS = {Montreal, Canada}, AUTHOR = {González Ballester, Miguel Angel and Xavier Pennec and Nicholas Ayache}, BOOKTITLE = {Proc. of MICCAI'03}, EDITOR = {Randy E. Ellis and Terry M. Peters}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {150-157}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Generalized Image Models and Their Application as Statistical Models of Images}, VOLUME = {2879}, YEAR = {2003}, OPTABSTRACT = {}, DOI = {10.1007/b93811}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gonzalez/Gonzalez_MICCAI_2003.pdf}, URL-PUBLISHER = {http://www.springerlink.com/openurl.asp?genre=article&issn=0302-9743&volume=2879&spage=150}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Hamarneh:ISMRM:03, ADDRESS = {Toronto (CA)}, AUTHOR = {G. Hamarneh and H. Delingette and M. Henkelman}, BOOKTITLE = {International Society for Magnetic Resonance in Medicine, 11th Scientific Meeting (ISMRM'03)}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {3D segmentation of mouse organs from MR images using deformable simplex mesh models}, OPTVOLUME = {}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{kenwright:miccai:2003, ADDRESS = {Montreal, Canada}, AUTHOR = {C. Kenwright and E. Bardinet and S.A. Hojjat and G. Malandain and N. Ayache and A.C.F. Colchester}, BOOKTITLE = {Medical image computing and computer-assisted intervention (MICCAI 2003)}, EDITOR = {Randy E. Ellis and Terry M. Peters}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {935--944}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {2D to 3D Refinement of Post Mortem Optical and MRI Co-Registration}, VOLUME = {2879}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Flandin:HBM:03b, ADDRESS = {New York, USA}, AUTHOR = {Pierre-Jean Lahaye and Jean-Baptiste Poline and Guillaume Flandin and Line Garnero}, BOOKTITLE = {NeuroImage (HBM'03)}, EDITOR = {Tomas Paus and Ed Bullmore and Jonathan D. Cohen}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Academic Press}, OPTSERIES = {}, TITLE = {Functional connectivity: studying non-linear, asynchronous interactions between BOLD signals}, OPTVOLUME = {}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {fMRI}, OPTURL = {}, URL-PUBLISHER = {http://208.164.121.55/hbm2003/abstract/abstract865.htm}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Linguraru:MICCAI:03, ADDRESS = {Montreal, Canada}, AUTHOR = {M. G. Linguraru and González Ballester, M. A. and N. Ayache}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention'03}, EDITOR = {Randy E. Ellis and Terry M. Peters}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {738-745}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {A Multiscale Feature Detector for Morphological Analysis of the Brain}, VOLUME = {2879}, YEAR = {2003}, OPTABSTRACT = {}, DOI = {10.1007/b93811}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gonzalez/Linguraru_MICCAI_2003.pdf}, URL-PUBLISHER = {http://www.springerlink.com/openurl.asp?genre=article&issn=0302-9743&volume=2879&spage=738}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{malandain-bardinet:ipmi:2003, OPTADDRESS = {}, AUTHOR = {G. Malandain and E. Bardinet}, BOOKTITLE = {Proceedings of Information Processing in Medical Imaging (IPMI'03)}, EDITOR = {Chris Taylor and Alison Noble}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {487--498}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Fusion of autoradiographies with an MR volume using 2-D and 3-D linear transformations}, VOLUME = {2732}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {autoradiography, histology, MRI, matching, fusion}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{malandain:miccai:2003, ADDRESS = {Montreal, Canada}, AUTHOR = {Grégoire Malandain and Eric Bardinet}, BOOKTITLE = {Medical image computing and computer-assisted intervention (MICCAI 2003)}, EDITOR = {Randy E. Ellis and Terry M. Peters}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {41--49}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Intensity compensation within series of images}, VOLUME = {2879}, YEAR = {2003}, ABSTRACT = {This article addresses the problem of histogram matching in the context of medical image processing. Such a problem occurs while comparing two images of the same object, where intensity differences are due to different acquisition conditions. This can be compensated by histogram matching or equalization. To achieve this, we based our method on windowing techniques. This allows to match implicitly continuous probability density functions, yielding more robust results than the methods issued from discrete histograms.}, DOI = {10.1007/978-3-540-39903-2_6}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Nicolau:AVIR:03, ADDRESS = {Genève}, AUTHOR = {Stéphane Nicolau and Alain Garcia and Xavier Pennec and Luc Soler and Nicholas Ayache}, BOOKTITLE = {Proceedings of Augmented and Virtual Reality Workshop (AVIR03)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {34-35}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Augmented Reality guided radio-frequency tumor ablation}, OPTVOLUME = {}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {3D/2D registration, Augmented reality, validation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Nicolau_AVIR03.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Nicolau:IMVIE:03, ADDRESS = {Strasbourg}, AUTHOR = {Stéphane Nicolau and Alain Garcia and Xavier Pennec and Luc Soler and Nicholas Ayache}, BOOKTITLE = {Actes du colloque Imagerie pour les sciences du vivant et de l'ingénieur (IMVIE03)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Guidage de ponctions percutanées à l'aide d'un système de vision basé sur une méthode de recalage 3D/2D}, OPTVOLUME = {}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {3D/2D registration, Augmented reality, validation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Nicolau_IMVIE03.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Nicolau:IS4TM:03, ADDRESS = {Juan-les-Pins, France}, AUTHOR = {Stéphane Nicolau and Xavier Pennec and Luc Soler and Nicholas Ayache}, BOOKTITLE = {International Symposium on Surgery Simulation and Soft Tissue Modeling (IS4TM'03)}, EDITOR = {N. Ayache and H. Delingette}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {INRIA Sophia Antipolis}, PAGES = {270--283}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Evaluation of a New 3D/2D Registration Criterion for Liver Radio-Frequencies Guided by Augmented Reality}, VOLUME = {2673}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {3D/2D registration, Augmented reality, validation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Nicolau.IS4TM03.pdf}, URL-PUBLISHER = {http://www.springerlink.com/openurl.asp?genre=article&issn=0302-9743&volume=2673&spage=270}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Nicolau:03:SFO, ADDRESS = {Belfort}, AUTHOR = {Stéphane Nicolau and Xavier Pennec and Luc Soler and Nicholas Ayache}, BOOKTITLE = {Actes du quatrième colloque francophone. Méthodes et Techniques Optiques pour l'Industrie}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {413--418}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Vision augmentée de structures anatomiques abdominales recalées par stéréoscopie}, VOLUME = {1}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{IMM2003-02375, OPTADDRESS = {}, AUTHOR = {R. R. Paulsen and K. B. Hilger}, BOOKTITLE = {Information Processing in Medical Imaging}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, SERIES = {IPMI}, TITLE = {Shape Modelling Using Markov Random Field Restoration of Point Correspondences}, OPTVOLUME = {}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Markov Random Field, Statistical Shape Model, Registration, Thin Plate Spline}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pitiot:MICCAI:03, ADDRESS = {Montreal}, AUTHOR = {A. Pitiot and H. Delingette and N. Ayache and P. M. Thompson}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention MICCAI'03}, EDITOR = {Randy E. Ellis and Terry M. Peters}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {644--652}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Expert-Knowledge-Guided Segmentation System for Brain MRI}, VOLUME = {2879}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Pitiot/pitiot-miccai-2003.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pitiot:IPMI:03, OPTADDRESS = {}, AUTHOR = {A. Pitiot and H. Delingette and A. Toga and P. M. Thompson}, BOOKTITLE = {Information Processing in Medical Imaging IPMI'03}, EDITOR = {Chris Taylor and J. A. Noble}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {25--37}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Learning Object Correspondences with the Observed Transport Shape Measure}, VOLUME = {2732}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Pitiot/pitiot-ipmi-2003.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pitiot:WBIR:03, ADDRESS = {Philadelphia, PA, USA}, AUTHOR = {A. Pitiot and G. Malandain and E. Bardinet and P. M. Thompson}, BOOKTITLE = {Second International Workshop on Biomedical Image Registration WBIR'03}, EDITOR = {J.C. Gee and J.B. A. Maintz and M. W. Vannier}, OPTMONTH = {}, NOTE = {Also research report INRIA RR-4866}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {91--101}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Piecewise Affine Registration of Biological Images}, VOLUME = {2717}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, histology}, URL = {https://www-sop.inria.fr/asclepios/Publications/Pitiot/pitiot-wbir-2003.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Flandin:HBM:03c, ADDRESS = {New York, USA}, AUTHOR = {Alexis Roche and Ferath Kherif and Guillaume Flandin and Jean-Baptiste Poline}, BOOKTITLE = {NeuroImage (HBM'03)}, EDITOR = {Tomas Paus and Ed Bullmore and Jonathan D. Cohen}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Academic Press}, OPTSERIES = {}, TITLE = {Should fMRI data be analyzed using a single BOLD response model across regions?}, OPTVOLUME = {}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {fMRI}, OPTURL = {}, URL-PUBLISHER = {http://208.164.121.55/hbm2003/abstract/abstract927.htm}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Sermesant:WBIR:03, ADDRESS = {Philadelphia, PA, USA}, AUTHOR = {Maxime Sermesant and Olivier Clatz and Zhongze Li and Stéphane Lanteri and Hervé Delingette and Nicholas Ayache}, BOOKTITLE = {Second International Workshop on Biomedical Image Registration WBIR'03}, EDITOR = {J.C. Gee and J.B. A. Maintz and M. W. Vannier}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {398--407}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {A Parallel Implementation of Non-Rigid Registration Using a Volumetric Biomechanical Model}, VOLUME = {2717}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/WBIR2003Sermesant.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Sermesant:IS4TM:03, ADDRESS = {Juan-les-Pins, France}, AUTHOR = {M. Sermesant and O. Faris and F. Evans and E. McVeigh and Yves Coudière and H. Delingette and N. Ayache}, BOOKTITLE = {International Symposium on Surgery Simulation and Soft Tissue Modeling (IS4TM'03)}, EDITOR = {N. Ayache and H. Delingette}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {INRIA Sophia Antipolis}, PAGES = {230--243}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Preliminary validation using in vivo measures of a macroscopic electrical model of the heart}, VOLUME = {2673}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/IS4TM2003Sermesant.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Stefanescu:MICCAI:2003, ADDRESS = {Montreal}, AUTHOR = {Radu Stefanescu and Xavier Pennec and Nicholas Ayache}, BOOKTITLE = {Proc. of MICCAI'03, Part II}, EDITOR = {Randy E. Ellis and Terry M. Peters}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {804--811}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Grid Enabled Non-Rigid Registration with a Dense Transformation and A Priori Information}, VOLUME = {2879}, YEAR = {2003}, OPTABSTRACT = {}, DOI = {10.1007/978-3-540-39903-2_98}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.springerlink.com/openurl.asp?genre=article&issn=0302-9743&volume=2879&spage=804}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Stefanescu:HealthGrid:03, ADDRESS = {Lyon}, AUTHOR = {Radu Stefanescu and Xavier Pennec and Nicholas Ayache}, BOOKTITLE = {Proc. of HealthGrid'03}, EDITOR = {Sofie Norager}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {European Commission, DG Information Society}, OPTSERIES = {}, TITLE = {Parallel non-rigid registration on a cluster of workstations}, OPTVOLUME = {}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, real time, parallelism}, URL = {https://www-sop.inria.fr/asclepios/Publications/Stefanescu/ParallelDemons_preprint.pdf}, URL-PUBLISHER = {http://lyon2003.healthgrid.org}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Stefanescu/ParallelDemons_preprint.ps}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{bardinet:HBM:03, ADDRESS = {New York, USA}, AUTHOR = {Jérôme Yelnik and Eric Bardinet and Didier Dormont and Chantal François and Dominique Tandé and Karine Parain and Grégoire Malandain and Nicholas Ayache and Etienne Hirsch and Yves Agid}, BOOKTITLE = {NeuroImage (HBM'03)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Delineation of the basal ganglia in MR images of patients by automatic registration of a multimodal atlas based on histological and MR data}, OPTVOLUME = {}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {fMRI}, OPTURL = {}, URL-PUBLISHER = {http://208.164.121.55/hbm2003/abstract/abstract1000.htm}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pitiot:BrainMapping-a:02, OPTADDRESS = {}, AUTHOR = {J Annese and A. Pitiot and A. Toga}, BOOKTITLE = {Human Brain Mapping HBM'02}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {3D cortical thickness maps from histological volumes}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {histology}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Bardinet:Pneumo:MICCAI:02, ADDRESS = {Tokyo}, AUTHOR = {Eric Bardinet and Pascal Cathier and Alexis Roche and Nicholas Ayache and Didier Dormont}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'02)}, EDITOR = {Takeyoshi Dohi and Ron Kikinis}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {323--330}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {A posteriori validation of pre-operative planning in functional neurosurgery by quantification of brain pneumocephalus}, VOLUME = {2488}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {functional neurosurgery}, URL = {https://www-sop.inria.fr/asclepios/Publications/Bardinet/bardinet-pneumo-miccai-2002.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Bardinet:SIERA:MICCAI:02, ADDRESS = {Tokyo}, AUTHOR = {Eric Bardinet and Sébastien Ourselin and Didier Dormont and Grégoire Malandain and Dominique Tandé and Karine Parain and Nicholas Ayache and Jérôme Yelnik}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'02)}, EDITOR = {Takeyoshi Dohi and Ron Kikinis}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {548--555}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Co-registration of histological, optical and MR data of the human brain}, VOLUME = {2488}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, human brain atlas, histology, MRI}, URL = {https://www-sop.inria.fr/asclepios/Publications/Bardinet/bardinet-siera-miccai-2002.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Bardinet:ISBI:02, ADDRESS = {Washington, USA}, AUTHOR = {Eric Bardinet and Sébastien Ourselin and Grégoire Malandain and Dominique Tandé and Karine Parain and Nicholas Ayache and Jérôme Yelnik}, BOOKTITLE = {IEEE International Symposium on Biomedical Imaging}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {329--332}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Three dimensional functional cartography of the human basal ganglia by registration of optical and histological serial sections}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, human brain atlas, histology, MRI}, URL = {https://www-sop.inria.fr/asclepios/Publications/Bardinet/bardinet-isbi-2002.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{blondel:cars:2002, ADDRESS = {Paris}, AUTHOR = {Christophe Blondel and Régis Vaillant and Frédéric Devernay and Grégoire Malandain and Nicholas Ayache}, BOOKTITLE = {Computer Assisted Radiology and Surgery 2002 Proceedings}, OPTEDITOR = {}, MONTH = {June}, NOTE = {International Symposium on Cardiovascular Imaging - Invasive Coronary and Vascular Imaging}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1073-1078}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {Automatic trinocular 3D reconstruction of coronary artery centerlines from rotational X-ray angiography}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/chir/personnel/Christophe.Blondel/CARS_2002_Christophe_Blondel.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00262383/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{boissonnat:ms4cms:2002, OPTADDRESS = {}, AUTHOR = {Jean-Daniel Boissonnat and Raphaelle Chaine and P. Frey and G. Malandain and F. Nicoud and S. Salmon and E. Saltel and M. Thiriet}, BOOKTITLE = {Conference on Modelling and Simulation for Computer-aided Medicine and Surgery (MS4CMS'02)}, EDITOR = {Marc Thiriet}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1--7}, PUBLISHER = {European Series in Applied and Industrial Mathematics}, SERIES = {ESAIM: PROC}, TITLE = {From medical images to computational meshes}, VOLUME = {12}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.edpsciences.org/articlesproc/Vol.12/PDF/Boissonnat.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Bardinet:SympNeuroradio:2002, ADDRESS = {Paris}, AUTHOR = {Didier Dormont and Eric Bardinet and Alexis Roche and Pascal Cachier and François Bonneville and Nicholas Ayache and Philippe Cornu and Claude Marsault}, BOOKTITLE = {XVIIth Symposium Neuroradiologicum}, OPTEDITOR = {}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Study of per-operative pneumocephalus during functional stereotactic procedures using automated registration algorithms of pre and immediate post operative 3D MR acquisitions}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Flandin:MICCAI:02, ADDRESS = {Tokyo}, AUTHOR = {Guillaume Flandin and Ferath Kherif and Xavier Pennec and Grégoire Malandain and Nicholas Ayache and Jean-Baptiste Poline}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'02)}, EDITOR = {Takeyoshi Dohi and Ron Kikinis}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {467--474}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Improved Detection Sensitivity in Functional MRI Data using a Brain Parcelling Technique}, VOLUME = {2488}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {fMRI}, URL = {https://www-sop.inria.fr/asclepios/Publications/Flandin/flandin-miccai-2002.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Flandin:HBM:02, ADDRESS = {Sendai, Japan}, AUTHOR = {Guillaume Flandin and Ferath Kherif and Xavier Pennec and Denis Rivière and Nicholas Ayache and Jean-Baptiste Poline}, BOOKTITLE = {NeuroImage (HBM'02)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A new representation of fMRI data using anatomo-functional constraints}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {fMRI}, OPTURL = {}, URL-PUBLISHER = {http://www.academicpress.com/journals/hbm2002/14115.html}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Flandin:ISBI:02, ADDRESS = {Washington, USA}, AUTHOR = {Guillaume Flandin and Ferath Kherif and Xavier Pennec and Denis Rivière and Nicholas Ayache and Jean-Baptiste Poline}, BOOKTITLE = {IEEE International Symposium on Biomedical Imaging}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {907--910}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Parcellation of brain images with anatomical and functional constraints for fMRI data analysis}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, DOI = {10.1109/ISBI.2002.1029408}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {fMRI}, URL = {https://www-sop.inria.fr/asclepios/Publications/Flandin/flandin-isbi-2002.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Forest:MICCAI:02, ADDRESS = {Tokyo}, AUTHOR = {Clément Forest and Hervé Delingette and Nicholas Ayache}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'02)}, EDITOR = {Takeyoshi Dohi and Ron Kikinis}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {235--244}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Cutting Simulation of Manifold Volumetric Meshes}, VOLUME = {2488}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Forest/MICCAI2002Forest.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Forest:MS4CMS:02, OPTADDRESS = {}, AUTHOR = {Clément Forest and Hervé Delingette and Nicholas Ayache}, BOOKTITLE = {Modelling & Simulation for Computer-aided Medicine and Surgery (MS4CMS'02)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Cutting Simulation of Manifold Volumetric Meshes}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Forest/MS4CMSForest.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Forest:CA:02, ADDRESS = {Geneva, Switzerland}, AUTHOR = {Clément Forest and Hervé Delingette and Nicholas Ayache}, BOOKTITLE = {Computer Animation (CA'02)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {225--229}, PUBLISHER = {IEEE Computer Society}, OPTSERIES = {}, TITLE = {Removing Tetrahedra from a Manifold Mesh}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Forest/CA2002Forest.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{granger:eccv:2002, ADDRESS = {Copenhagen, Denmark}, AUTHOR = {Sébastien Granger and Xavier Pennec}, BOOKTITLE = {European Conference on Computer Vision (ECCV 2002)}, EDITOR = {A. Heyden and G. Sparr and M. Nielsen and P. Johansen}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {418--432}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Multi-scale EM-ICP: A Fast and Robust Approach for Surface Registration}, VOLUME = {2353}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {surface registration}, URL = {https://www-sop.inria.fr/asclepios/Publications/Granger/eccv-2002.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Jannin:validation:CARS02, OPTADDRESS = {}, AUTHOR = {P. Jannin and J.M. Fitzpatrick and D.J. Hawkes and X. Pennec and R. Sahidi and M.W. Vannier}, BOOKTITLE = {Proc. of Int. Conf. on Computer Assisted Radiology (CARS 2002)}, EDITOR = {H.U. Lemke and M.W. Vannier and K. Inamura and A.G. Farman and K. Doi and J.H.C. Reiber}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {299--305}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {White paper: validation of medical image processing in image-guided therapy}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Kherif:MICCAI:02, ADDRESS = {Tokyo}, AUTHOR = {Ferath Kherif and Guillaume Flandin and Philippe Ciuciu and Habib Benali and Olivier Simon and Jean-Baptiste Poline}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'02)}, EDITOR = {Takeyoshi Dohi and Ron Kikinis}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {509--516}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Model Based Spatial and Temporal Similarity Measures between Series of Functional Magnetic Resonance Images}, VOLUME = {2489}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {fMRI}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Kherif:HBM:02, ADDRESS = {Sendai, Japan}, AUTHOR = {Ferath Kherif and Guillaume Flandin and Olivier Simon and Habib Benali and Jean-Baptiste Poline}, BOOKTITLE = {NeuroImage (HBM'02)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {How much subjects are resembling each other? Spatial and temporal similarity measures for fMRI data}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {fMRI}, OPTURL = {}, URL-PUBLISHER = {http://www.academicpress.com/journals/hbm2002/14005.html}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Linguraru:IWDM:02:3, OPTADDRESS = {}, AUTHOR = {M.G. Linguraru and J.M. Brady}, BOOKTITLE = {Digital Mammography IWDM'02}, EDITOR = {H.O. Peitgen}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {339--341}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {A Non-Parametric Approach to Detecting Microcalcifications}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Linguraru:IWDM:02:1, OPTADDRESS = {}, AUTHOR = {M.G. Linguraru and J.M. Brady and M. Yam}, BOOKTITLE = {Digital Mammography IWDM'02}, EDITOR = {H.O. Peitgen}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {342--346}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {Detection of Microcalcifications using SMF}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Linguraru/Linguraru_IWDM_2002_1.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Linguraru:IWDM:02:2, OPTADDRESS = {}, AUTHOR = {M.G. Linguraru and K. Marias and J.M. Brady}, BOOKTITLE = {Digital Mammography IWDM'02}, EDITOR = {H.O. Peitgen}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {347--349}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {Temporal Mass Detection}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Linguraru/Linguraru_IWDM_2002_2.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pitiot:BrainMapping-c:02, OPTADDRESS = {}, AUTHOR = {A. Mackenzie-Graham and E. Lee and I. Dinov and A. Pitiot and G. Hu and M. Bota and Y. Ding and L. Capetillo-Cunlife and K. Crawford and B. Truong and A. Toga}, BOOKTITLE = {Human Brain Mapping HBM'02}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Atlas of the C57BL/6 mouse brain: A multimodal, multidimensional approach}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{malandain-boissonnat:dgci:2002, ADDRESS = {Bordeaux, France}, AUTHOR = {Grégoire Malandain and Jean-Daniel Boissonnat}, BOOKTITLE = {Discrete Geometry for Computer Imagery (DGCI 2002)}, EDITOR = {A. Braquelaire and J.-O. Lachaud and A. Vialard}, OPTMONTH = {}, NOTE = {also INRIA research report RR-4233}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Computing the Diameter of a Point Set}, VOLUME = {2301}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {computational geometry, diameter, width, approximation, point sets, furthest neighbors, double normal}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/dgci-2002.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/dgci-2002.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072354/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Moreau:ICPR:02, OPTADDRESS = {}, AUTHOR = {V. Moreau and L.D. Cohen and D. Pellerin}, BOOKTITLE = {International Conference on Pattern Recognition}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Estimation and Analysis of the Deformation of the Cardiac Wall using Doppler Tissue Imaging}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Moreau/icpr02.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Ourselin:MICCAI:02, ADDRESS = {Tokyo}, AUTHOR = {Sébastien Ourselin and Radu Stefanescu and Xavier Pennec}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'02)}, EDITOR = {Takeyoshi Dohi and Ron Kikinis}, MONTH = {September}, NOTE = {A preliminary version appeared as INRIA RR-4333}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {140--147}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Robust registration of multi-modal images: towards real-time clinical applications}, VOLUME = {2489}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {parallelism, robust estimation, registration, matching}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Ourselin_Stefanescu_Pennec_MICCAI02.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072254/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pitiot:IJCNN:02, OPTADDRESS = {}, AUTHOR = {A. Pitiot and A. Toga and N. Ayache and P. M. Thompson}, BOOKTITLE = {World Congress on Computational Intelligence / INNS-IEEE International Joint Conference on Neural Networks WCCI-IJCNN'02}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Texture based MRI segmentation with a two-stage hybrid neural classifier}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Pitiot/pitiot-wcci-2002.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Prima:Miccai:02, ADDRESS = {Tokyo}, AUTHOR = {S. Prima and N. Ayache and A. Janke and S. Francis and D. Arnold and L. Collins}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'02)}, EDITOR = {Takeyoshi Dohi and Ron Kikinis}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {363--371}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Statistical Analysis of Longitudinal MRI Data: Application for detection of Disease Activity in MS}, VOLUME = {2488}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Prima/Prima02b.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Sermesant:ISBI:02, OPTADDRESS = {}, AUTHOR = {M. Sermesant and Y. Coudière and H. Delingette and N. Ayache}, BOOKTITLE = {IEEE International Symposium on Biomedical Imaging (ISBI'02)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {10--14}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Progress towards an Electro-Mechanical Model of the Heart for Cardiac Image Analysis}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {4D, Heart, segmentation, medical images, motion tracking, electromechanical model}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/ISBI2002Sermesant.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Sermesant:MS4CMS:02, OPTADDRESS = {}, AUTHOR = {M. Sermesant and Y. Coudière and H. Delingette and N. Ayache and J. Sainte-Marie and D. Chapelle and F. Clément and M. Sorine}, BOOKTITLE = {Modelling and Simulation for Computer-aided Medicine and Surgery (MS4CMS'02)}, EDITOR = {Marc Thiriet}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {153--162}, PUBLISHER = {European Series in Applied and Industrial Mathematics}, SERIES = {ESAIM: PROC}, TITLE = {Progress Towards Model-Based Estimation of the Cardiac Electromechanical Activity from ECG Signals and 4D Images}, VOLUME = {12}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {4D, Heart, segmentation, medical images, motion tracking, electromechanical model}, OPTURL = {}, URL-PUBLISHER = {http://www.edpsciences.org/articlesproc/Vol.12/PDF/Sermesant.pdf}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/MS4CMS2002icema.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Sermesant:MICCAI:02, ADDRESS = {Tokyo}, AUTHOR = {Maxime Sermesant and Clément Forest and Xavier Pennec and Hervé Delingette and Nicholas Ayache}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'02)}, EDITOR = {Takeyoshi Dohi and Ron Kikinis}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {714--721}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Biomechanical Model Construction from Different Modalities: Application to Cardiac Images}, VOLUME = {2488}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {4D, Heart, segmentation, medical images, motion tracking}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/MICCAI2002Sermesant.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Bardinet:FENS:2002, ADDRESS = {Paris}, AUTHOR = {Jérôme Yelnik and Eric Bardinet and Didier Dormont and Chantal François and Dominique Tandé and Karine Parain and Sébastien Ourselin and Grégoire Malandain and Nicholas Ayache and Etienne Hirsch}, BOOKTITLE = {3rd Forum of European Neuroscience}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {The Federation of European Neuroscience Societies (FENS)}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Elaboration of a three-dimensional, functional and registrable atlas of the human basal ganglia}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, human brain atlas, histology, MRI}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pitiot:BrainMapping-b:02, OPTADDRESS = {}, AUTHOR = {S. Ying and J. Alger and A. Pitiot and M. Lee and J. Jen and R. Baloh and D. Perlman and D. Geschwind and M. Jacoboni and J. Mazziotta and A. Toga}, BOOKTITLE = {Human Brain Mapping HBM'02}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Cerebellar control of oculomotion in patients with neuronal calcium channel mutations: high resolution MRI, genotype-phenotype correlation, and functional anatomical correlation}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pitiot:Neurology:02, OPTADDRESS = {}, AUTHOR = {S. Ying and J. Alger and A. Pitiot and D. Rex and J. Jen and R. Baloh and M. Jacoboni and J. Mazziotta and A. Toga}, BOOKTITLE = {American Academy of Neurology}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Stochastic tomography, regional volumetric comparisons, and genotype-anatomical correlation in patients with spinocerebella ataxia type 6 and episodic ataxia type 2}, OPTVOLUME = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Allouche:FIMH:01, OPTADDRESS = {}, AUTHOR = {C. Allouche and S. Makram and N. Ayache and H. Delingette}, BOOKTITLE = {Functional Imaging and Modeling of the Heart (FIMH'01), Helsinki, Finland}, EDITOR = {T. Katila and I.E. Magnin and P. Clarysse and J. Montagnat and J. Nenonen}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {61-68}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {A new kinetic modeling scheme for the human left ventricle wall motion with MR-tagging imaging}, VOLUME = {2230}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Allouche:CARS:01, OPTADDRESS = {}, AUTHOR = {C. Allouche and S. Makram and N. Ayache and H. Delingette}, BOOKTITLE = {Computer Assisted Radiology and Surgery (CARS)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {911-916}, PUBLISHER = {Elsevier}, OPTSERIES = {}, TITLE = {New methods and algorithms for the accurate real-time motion analysis of the left ventricle with MRI-Tagging imaging}, VOLUME = {1230}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pitiot:BrainMapping:01, OPTADDRESS = {}, AUTHOR = {J. Annese and A. Pitiot and A.W. Toga}, BOOKTITLE = {Human Brain Mapping HBM'01}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Complex topological analysis of the human striate cortex (V1)}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Ayache:FIMH:01, OPTADDRESS = {}, AUTHOR = {N. Ayache and D. Chapelle and F. Clément and Y. Coudière and H. Delingette and J.A. Désidéri and M. Sermesant and M. Sorine and J. Urquiza}, BOOKTITLE = {Functional Imaging and Modeling of the Heart (FIMH'01), Helsinki, Finland}, EDITOR = {T. Katila and I.E. Magnin and P. Clarysse and J. Montagnat and Nenonen J.}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {120-127}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Towards Model-Based Estimation of the Cardiac Electro-Mechanical Activity from ECG Signals and Ultrasound Images}, VOLUME = {2230}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {4D, Heart, segmentation, medical images, motion tracking, electromechanical model}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/FIMH2001icema.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{ayache-pennec-al:EJMP:01, OPTADDRESS = {}, AUTHOR = {Nicholas Ayache and Xavier Pennec and Pascal Cachier}, BOOKTITLE = {Medical Physics and Clinical Engineering Conference}, OPTEDITOR = {}, OPTMONTH = {}, NOTE = {Invited talk, Physica Medica (European journal of Medical Physics) 17(3)}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Fusing 3-D ultrasound and MRI for real-time image-guided neurosurgery}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, ultrasound, magnetic resonance, multimodal, deformations}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Bardinet:MICCAI:01, ADDRESS = {Utrecht, The Netherlands}, AUTHOR = {E. Bardinet and A.C.F Colchester and A. Roche and Y. Zhu and Y. He and S. Ourselin and B. Nailon and S.A. Hojjat and J. Ironside and S. Al-Sarraj and N. Ayache and J. Wardlaw}, BOOKTITLE = {4th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01)}, EDITOR = {W.J. Niessen and M.A. Viergever}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {957--965}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Registration of Reconstructed Post Mortem Optical Data with MR Scans of the Same Patient}, VOLUME = {2208}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, histology}, URL = {https://www-sop.inria.fr/asclepios/Publications/Bardinet/22080957.pdf}, URL-PUBLISHER = {http://link.springer.de/link/service/series/0558/bibs/2208/22080957.htm}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Cachier:MICCAI:01, ADDRESS = {Utrecht, The Netherlands}, AUTHOR = {P. Cachier}, BOOKTITLE = {4th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01)}, EDITOR = {W.J. Niessen and M.A. Viergever}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1285--1286}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {How to trade off between Regularization and Image Similarity in Non-rigid Registration?}, VOLUME = {2208}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, deformations}, URL = {https://www-sop.inria.fr/asclepios/Publications/Cachier/Cachier-MICCAI01-b.pdf}, URL-PUBLISHER = {http://link.springer.de/link/service/series/0558/bibs/2208/22081285.htm}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Cachier/Cachier-MICCAI01-b.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Cachier:Mangin:MICCAI:01, ADDRESS = {Utrecht, The Netherlands}, AUTHOR = {Pascal Cachier and Jean-François Mangin and Xavier Pennec and Denis Rivière and Dimitri Papadopoulos-Orfanos and Jean Régis and Nicholas Ayache}, BOOKTITLE = {4th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01)}, EDITOR = {W.J. Niessen and M.A. Viergever}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {734--742}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Multisubject Non-Rigid Registration of Brain MRI using Intensity and Geometric Features}, VOLUME = {2208}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, multisubject, magnetic resonance, Deformations}, URL = {https://www-sop.inria.fr/asclepios/Publications/Cachier/Cachier-MICCAI01.pdf}, URL-PUBLISHER = {http://link.springer.de/link/service/series/0558/bibs/2208/22080734.htm}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Cachier/Cachier-MICCAI01.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Delingette:VLSM:01, ADDRESS = {Vancouver, Canada}, AUTHOR = {H. Delingette}, BOOKTITLE = {IEEE Workshop on Variational and Level Set Methods in Computer Vision (VLSM 2001)}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {43--50}, PUBLISHER = {IEEE Society}, OPTSERIES = {}, TITLE = {On Smoothness Measures of Active Contours and Surfaces}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, regularization}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/delingette-vlsm01.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Delingette:AIM:01, ADDRESS = {CHU La Pitié-Salpétrière, Paris}, AUTHOR = {H. 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Sugimoto}, BOOKTITLE = {3rd International Symposium of the Japanese Society of Magnetic Resonance in Medicine JSMRM}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Robust Estimation of Coil Sensitivities for PPA Reconstruction}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:ISMRMa:2001, ADDRESS = {Glasgow, UK}, AUTHOR = {González Ballester, M. A. and Y. Machida and Y. Kassai and Y. Hamamura and H. Sugimoto}, BOOKTITLE = {9th Scientific Meeting of the International Society of Magnetic Resonance in Medicine ISMRM}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Robust Estimation of Coil Sensitivities for RF Subencoding Acquisition Techniques}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:JMRMa:2001, ADDRESS = {Tsukuba, Japan}, AUTHOR = {González Ballester, M. A. and Y. Machida and S. Nozaki and S. Uchizono and H. Sugimoto}, BOOKTITLE = {29th Meeting of the Japanese Journal of Magnetic Resonance in Medicine JMRM}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {3D Thin-Plate Splines for Prescan-Based Sensitivity Assessment in Parallel Imaging}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Granger:MICCAI:01, ADDRESS = {Utrecht, The Netherlands}, AUTHOR = {Sébastien Granger and Xavier Pennec and Alexis Roche}, BOOKTITLE = {4th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01)}, EDITOR = {W.J. Niessen and M.A. Viergever}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {752--761}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Rigid Point-Surface Registration Using an EM variant of ICP for Computer Guided Oral Implantology}, VOLUME = {2208}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, surface, odontology, validation, uncertainty}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Granger.Pennec.MICCAI01.pdf}, URL-PUBLISHER = {http://link.springer.de/link/service/series/0558/bibs/2208/22080752.htm}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Hellier:MICCAI:01, ADDRESS = {Utrecht, The Netherlands}, AUTHOR = {P. Hellier and C. Barillot and I. Corouge and B. Giraud and Le Goualher, G. and L. Collins and A. Evans and G. Malandain and N. Ayache}, BOOKTITLE = {4th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01)}, EDITOR = {W.J. Niessen and M.A. Viergever}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {258--265}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Retrospective Evaluation of Inter-subject Brain registration}, VOLUME = {2208}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching}, URL = {https://www-sop.inria.fr/asclepios/Publications/Hellier/22080258.pdf}, URL-PUBLISHER = {http://link.springer.de/link/service/series/0558/bibs/2208/22080258.htm}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:ISMRMd:2001, ADDRESS = {Glasgow, UK}, AUTHOR = {Y. Kobayashi and T. Osamu and N. Imai and T. Yokomizo and Y. Machida and González Ballester, M. A. and K. Yodo}, BOOKTITLE = {9th Scientific Meeting of the International Society of Magnetic Resonance in Medicine ISMRM}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Improvement of Image Quality in 2D/3D Half-Fourier FSE with RF Subencoding Acquisition - Clinical Applications in Thoracic Imaging}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:JMRMe:2001, ADDRESS = {Tsukuba, Japan}, AUTHOR = {Y. Kobayashi and O. Tanaka and K. Matsuura and K. Hamada and Y. Machida and González Ballester, M. A. and T. Miyata and K. Yodo}, BOOKTITLE = {29th Meeting of the Japanese Journal of Magnetic Resonance in Medicine JMRM}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Evaluation of Black Blood Imaging Using Multicoil High Speed Imaging (SPEEDER) (in Japanese)}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:JRS:2001, OPTADDRESS = {}, AUTHOR = {Y. Kobayashi and O. Tanaka and K. Matsuura and K. Hamada and Y. Machida and González Ballester, M. A. and T. Miyata and K. Yodo}, BOOKTITLE = {Japanese Radiological Society JRS}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Improvement of Image Quality in 2D/3D Phase Non-Contrast MRA with Multiple RF Coil High Speed Imaging (in Japanese)}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:JMRMd:2001, ADDRESS = {Tsukuba, Japan}, AUTHOR = {S. Kuhara and Y. Kassai and M. Yui and Y. Machida and González Ballester, M. A.}, BOOKTITLE = {29th Meeting of the Japanese Journal of Magnetic Resonance in Medicine JMRM}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {3D Interactive Locator Technique Using SPEEDER Fast Imaging (in Japanese)}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Linguraru:Medinfo:01, OPTADDRESS = {}, AUTHOR = {M.G. Linguraru and J.M. Brady and T. Kadir and M. Yam}, BOOKTITLE = {Proc. of Tenth World Congress on Health and Medical Informatics Medinfo'01}, EDITOR = {V.L. Patel and R. Rogers and R. Haux}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {946}, PUBLISHER = {IOS Press}, OPTSERIES = {}, TITLE = {A Novel Method to Detect Microcalcifications for Early Signs of Breast Cancer}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Linguraru:MICCAI:01, OPTADDRESS = {}, AUTHOR = {M.G. Linguraru and J.M. Brady and M. Yam}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention MICCAI'01}, EDITOR = {W. Niessen and M. Viergever}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {629--636}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Filtering hint Images for the Detection of Microcalcification}, VOLUME = {2208}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Linguraru/Linguraru_MICCAI_2001.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:JMRA:2001, ADDRESS = {Tokyo, Japan}, AUTHOR = {Y. Machida and González Ballester, M. A. and H. Takai and Y. Hamamura}, BOOKTITLE = {9th Japanese Conference on Magnetic Resonance Angiography}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Application of Multiple RF Coil High Speed Imaging (SPEEDER) to Flow-Compensated Fresh Blood Imaging (in Japanese)}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:ISMRMc:2001, ADDRESS = {Glasgow, UK}, AUTHOR = {Y. Machida and González Ballester, M. A. and H. Takai and Y. Kassai and Y. Hamamura}, BOOKTITLE = {9th Scientific Meeting of the International Society of Magnetic Resonance in Medicine ISMRM}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Application of RF Subencoding Acquisition to Flow Compensated 3D Half-Fourier FSE MRA}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:JMRMb:2001, ADDRESS = {Tsukuba, Japan}, AUTHOR = {Y. Machida and S. Kuhara and González Ballester, M. A. and S. Nozaki and H. Takai and Y. Kassai and Y. Hamamura}, BOOKTITLE = {29th Meeting of the Japanese Journal of Magnetic Resonance in Medicine JMRM}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Application of SPEEDER to FBI - Artifact Reduction in ESSR (in Japanese)}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:ISMRMb:2001, ADDRESS = {Glasgow, UK}, AUTHOR = {Y. Machida and S. Kuhara and González Ballester, M. A. and H. Takai and Y. Kassai and Y. Hamamura}, BOOKTITLE = {9th Scientific Meeting of the International Society of Magnetic Resonance in Medicine ISMRM}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A Novel Subencoding Reconstruction Technique in 3D Half-Fourier FSE for Non-Contrast MRA without Flow-Related N/2 Artifacts}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{MIGNECO:EANM:01, ADDRESS = {Napoli, Italy}, AUTHOR = {O. Migneco and G. Malandain and P.M. Koulibaly and Ph. Robert and N. Ayache and J. Darcourt}, BOOKTITLE = {European Association of Nuclear Medicine Meeting}, OPTEDITOR = {}, OPTMONTH = {}, NOTE = {European Journal of Nuclear Medecine 28(8):1056}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Evaluation of an automatic classifier for SPECT Alzheimer's disease diagnosis}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://141.39.169.3/eanm2001/abstracts/979.htm}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:JSMRMb:2001, ADDRESS = {Tokyo, Japan}, AUTHOR = {M. Miyazaki and H. Takai and H. Kanazawa and González Ballester, M. A. and Y. Machida}, BOOKTITLE = {3rd International Symposium of the Japanese Society of Magnetic Resonance in Medicine JSMRM}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Progress in Non-Enhanced MRA: Dual-Phase Scan, Functional MRA, and RF Sub-Encoding Acquisition}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Mourgues:MICCAI:01, ADDRESS = {Utrecht, The Netherlands}, AUTHOR = {F. Mourgues and F. Devernay and G. Malandain and E. Coste-Manière}, BOOKTITLE = {4th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01)}, EDITOR = {W.J. Niessen and M.A. Viergever}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1320--1322}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {3D+t Modeling of Coronary Artery Tree from Standard Non Simultaneous Angiograms}, VOLUME = {2208}, YEAR = {2001}, OPTABSTRACT = {}, DOI = {10.1007/3-540-45468-3_213}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Mourgues/22081320.pdf}, URL-PUBLISHER = {http://link.springer.de/link/service/series/0558/bibs/2208/22081320.htm}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00267253/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:JMRMc:2001, ADDRESS = {Tsukuba, Japan}, AUTHOR = {S. Nozaki and T. Kimura and H. Takai and González Ballester, M. A. and Y. Hamamura and Y. Machida}, BOOKTITLE = {29th Meeting of the Japanese Journal of Magnetic Resonance in Medicine JMRM}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Application of SPEEDER to Diffusion Imaging (in Japanese)}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Subsol:ICPPS:01.2, ADDRESS = {Liège (Belgium)}, AUTHOR = {G. Odin and G. Quatrehomme and G. Subsol and H. Delingette and B. Mafart and de Lumley, M.A.}, BOOKTITLE = {XIV International Congress of Prehistoric and Protohistoric Science (Pre-prints)}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {23}, PUBLISHER = {Université de Liège}, OPTSERIES = {}, TITLE = {Comparison of a Three-Dimensional and a Computerized Assisted Method for Cranio-Facial Reconstruction: Application to Tautavel Man}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Ourselin:MICCAI:01, ADDRESS = {Utrecht, The Netherlands}, AUTHOR = {S. Ourselin and E. Bardinet and D. Dormont and G. Malandain and A. Roche and N. Ayache and D. Tandé and K. Parain and J. Yelnik}, BOOKTITLE = {4th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01)}, EDITOR = {W.J. Niessen and M.A. Viergever}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {743--751}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Fusion of histological sections and MR images: towards the construction of an atlas of the human basal ganglia}, VOLUME = {2208}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, human brain atlas, histology, MRI}, URL = {https://www-sop.inria.fr/asclepios/Publications/Ourselin/22080743.pdf}, URL-PUBLISHER = {http://link.springer.de/link/service/series/0558/bibs/2208/22080743.htm}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pennec:Dagsthul:01, ADDRESS = {Dagsthul}, AUTHOR = {Xavier Pennec}, BOOKTITLE = {Methodology of Evaluation in Computational Medical Imaging}, EDITOR = {K.W. Bowyer and M.H. Loew and H. S. Stiehl and M. Viergever}, MONTH = {March}, NOTE = {Dagstuhl Seminar 01111}, OPTNUMBER = {}, ORGANIZATION = {Schloss Dagsthul, Int. Conf. and Research Center for Computer Science}, PAGES = {15--16}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Evaluation of the Uncertainty in Various Registration problems}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, validation, uncertainty}, URL = {ftp://ftp.dagstuhl.de/pub/Reports/01/01111.pdf.gz}, URL-PUBLISHER = {http://www.dagstuhl.de/DATA/Reports/01111/}, OPTPMID = {}, POSTSCRIPT = {ftp://ftp.dagstuhl.de/pub/Reports/01/01111.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pennec:MIAR:01, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Nicholas Ayache and Alexis Roche and Pascal Cachier}, BOOKTITLE = {Proc of Int. Workshop on Medical Imaging and Augmented Reality (MIAR 2001), 10-12 June 2001, Shatin, Hong Kong}, EDITOR = {IEEE Computer Society Press}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {79--86}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Non-rigid MR/US registration for tracking brain deformations}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, DOI = {10.1109/MIAR.2001.930268}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, motion tracking, multimodal, ultrasound, magnetic resonance, deformations}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.MIAR01.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.MIAR01.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pennec:IPMI:01, ADDRESS = {Davis, CA, USA}, AUTHOR = {Xavier Pennec and Pascal Cachier and Nicholas Ayache}, BOOKTITLE = {Proc. of IPMI'01}, EDITOR = {M.I. Insana and R.M. Leahy}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {169--175}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Tracking brain deformations in time sequences of 3D US images}, VOLUME = {2082}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, motion tracking, ultrasound, deformations}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec_IPMI01.pdf}, URL-PUBLISHER = {http://www.springerlink.com/openurl.asp?genre=article&issn=0302-9743&volume=2082&spage=169}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Picinbono:ICRA:01, ADDRESS = {Seoul Korea}, AUTHOR = {G. Picinbono and H. Delingette and N. Ayache}, BOOKTITLE = {ICRA2001: IEEE International Conference Robotics and Automation}, OPTEDITOR = {}, MONTH = {May}, NOTE = {Best conference paper award}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Non-linear and anisotropic elastic soft tissue models for medical simulation}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {simulation, Deformations}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://www-sop.inria.fr/asclepios/Publications/Picinbono/icra2001.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Prima:Ayache:MICCAI:01, ADDRESS = {Utrecht, The Netherlands}, AUTHOR = {S. Prima and N. Ayache and Tom Barrick and Neil Roberts}, BOOKTITLE = {4th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01)}, EDITOR = {W.J. Niessen and M.A. Viergever}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {811--819}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Maximum Likelihood Estimation of the Bias Field in MR Brain Images: Investigating Different Modelings of the Imaging Process}, VOLUME = {2208}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Prima/22080811.pdf}, URL-PUBLISHER = {http://link.springer.de/link/service/series/0558/bibs/2208/22080811.htm}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Rey:MMBIA:01, ADDRESS = {Kauia, Hawai, USA}, AUTHOR = {David Rey and Jonathan Stoeckel and Grégoire Malandain and Nicholas Ayache}, BOOKTITLE = {IEEE Workshop on Mathematical Methods in Biomedical Image Analysis, MMBIA'01}, OPTEDITOR = {}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A Spatio-temporal Model-based Statistical Approach to Detect Evolving Multiple Sclerosis Lesions}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis}, URL = {https://www-sop.inria.fr/asclepios/Publications/Stoeckel/art1MMBIA.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Rey:MICCAI:01, ADDRESS = {Utrecht, The Netherlands}, AUTHOR = {D. Rey and J. Stoeckel and G. Malandain and N. Ayache}, BOOKTITLE = {4th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01)}, EDITOR = {W.J. Niessen and M.A. Viergever}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1232--1234}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Using SPM to Detect Evolving MS Lesions}, VOLUME = {2208}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis}, URL = {https://www-sop.inria.fr/asclepios/Publications/Rey/22081232.pdf}, URL-PUBLISHER = {http://link.springer.de/link/service/series/0558/bibs/2208/22081232.htm}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Sermesant:MICCAI:01, ADDRESS = {Utrecht, The Netherlands}, AUTHOR = {M. Sermesant and Y. Coudière and H. Delingette and N. Ayache and J.A. Désidéri}, BOOKTITLE = {4th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01)}, EDITOR = {W.J. Niessen and M.A. Viergever}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {224--231}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {An Electro-Mechanical Model of the Heart for Cardiac Image Analysis}, VOLUME = {2208}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {4D, Heart, segmentation, medical images, motion tracking, electromechanical model}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/MICCAI2001Sermesant.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Stoeckel:MICCAI:01, ADDRESS = {Utrecht, The Netherlands}, AUTHOR = {J. Stoeckel and G. Malandain and O. Migneco and P.M. Koulibaly and P. Robert and N. Ayache and J. Darcourt}, BOOKTITLE = {4th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01)}, EDITOR = {W.J. Niessen and M.A. Viergever}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {666--674}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Classification of SPECT Images of Normal Subjects versus Images of Alzheimer's Disease Patients}, VOLUME = {2208}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Stoeckel/22080666.pdf}, URL-PUBLISHER = {http://link.springer.de/link/service/series/0558/bibs/2208/22080666.htm}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{STOECKEL:HBM:01, ADDRESS = {Brighton, UK}, AUTHOR = {J. Stoeckel and J.-B. Poline and G. Malandain and N. Ayache and J. Darcourt}, BOOKTITLE = {Human Brain Mapping HBM'01}, OPTEDITOR = {}, MONTH = {June}, NOTE = {In NeuroImage 13(6 supplement 1):259}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Smoothness and degrees of freedom restrictions when using SPM 99}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Subsol:ICPPS:01.1, ADDRESS = {Liège (Belgium)}, AUTHOR = {G. Subsol and B. Mafart and A. Silvestre and de Lumley, M.A.}, BOOKTITLE = {XIV International Congress of Prehistoric and Protohistoric Science (Pre-prints)}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {22}, PUBLISHER = {Université de Liège}, OPTSERIES = {}, TITLE = {CT-Scan Image Processing for the Study of the Evolution of the Shape of the Human Skull: Presentation of the Tools and Preliminary Results}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Thorpe:IEEERobotics:01, ADDRESS = {Seoul, Korea}, AUTHOR = {Charles Thorpe and Olivier Clatz and David Duggins and Jay Gowdy and Robert MacLachlan and James Miller and Christoph Mertz and Mel Siegel and Chieh-Chih Wangand and Teruko Yata}, BOOKTITLE = {International Advanced Robotics Programme IEEE, Robotics and Automation Society}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Dependable Perception for Robots}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Clatz/thorpe_clatz_et_al_2001.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pitiot:Neuroscience:01, OPTADDRESS = {}, AUTHOR = {S. Ying and J. Alger and A. Pitiot and D.E. Rex and J. Jen and R.W. Baloh and M. Jacoboni and J.C. Mazziotta and A.W. Toga}, BOOKTITLE = {Society of NeuroImage}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Stochastic tomography, regional volumetric comparisons, and genotype-anatomical correlation in patients with spinocerebella ataxia type 6 and episodic ataxia type 2}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:JSRT:2001, ADDRESS = {Kobe, Japan}, AUTHOR = {T. Yokomizo and Y. Koyama and M. Sagehashi and N. Imai and Y. Chiba and Y. Machida and González Ballester, M. A. and T. Miyata and K. Yodo}, BOOKTITLE = {Japanese Society of Radiological Technicians JSRT}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Evaluation of Basic Characteristics of Multiple RF Coil High Speed Imaging (in Japanese)}, OPTVOLUME = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Bardinet-al2000, ADDRESS = {Baden-Baden, Allemagne}, AUTHOR = {E. Bardinet and S. Fernández-Vidal and S. Damas and G. Malandain and de la Blanca Capilla, N. Perez}, BOOKTITLE = {Advanced Concepts for Intelligent Vision Systems (ACIVS 2000)}, OPTEDITOR = {}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Structural Object Matching}, OPTVOLUME = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Cachier:MMBIA:00, ADDRESS = {Hilton Head Island, South Carolina, USA}, AUTHOR = {Pascal Cachier and Xavier Pennec}, BOOKTITLE = {Proc. of IEEE Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA'00)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {182--189}, PUBLISHER = {IEEE Computer society}, OPTSERIES = {}, TITLE = {3D Non-Rigid Registration by Gradient Descent on a Gaussian-Windowed Similarity Measure using Convolutions}, OPTVOLUME = {}, YEAR = {2000}, OPTABSTRACT = {}, DOI = {10.1109/MMBIA.2000.852376}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, multimodal, magnetic resonance, deformations}, URL = {https://www-sop.inria.fr/asclepios/Publications/Cachier/Cachier-MMBIA00.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Cachier/Cachier-MMBIA00.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Cachier00b, ADDRESS = {Pittsburgh, Pennsylvanie USA}, AUTHOR = {P. Cachier and D. Rey}, BOOKTITLE = {Third International Conference on Medical Robotics, Imaging And Computer Assisted Surgery (MICCAI 2000)}, EDITOR = {A.M. DiGioia and S. Delp}, MONTH = {octobre 11-14}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {Lectures Notes in Computer Science}, TITLE = {Symmetrization of the Non-Rigid Registration Probem using Inversion-Invariant Energies: Application to Multiple Sclerosis}, VOLUME = {1935}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, magnetic resonance, deformations}, URL = {https://www-sop.inria.fr/asclepios/Publications/Cachier/Cachier-MICCAI00.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Cachier/Cachier-MICCAI00.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{colchester-ourselin:miccai:00, ADDRESS = {Pittsburgh, Pennsylvanie USA}, AUTHOR = {A. C. F. Colchester and S. Ourselin and Y. Zhu and E. Bardinet and Y. He and A. Roche and S. Al-Sarraj and B. Nailon and J. Ironside and N. Ayache}, BOOKTITLE = {Third International Conference on Medical Robotics, Imaging And Computer Assisted Surgery (MICCAI 2000)}, EDITOR = {A.M. DiGioia and S. Delp}, MONTH = {octobre 11-14}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {Lectures Notes in Computer Science}, TITLE = {3-D Reconstruction of Macroscopic Optical Brain Slice Images}, VOLUME = {1935}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, histology, MRI}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette-Berder00, ADDRESS = {Berder, France}, AUTHOR = {H. Delingette}, BOOKTITLE = {Fourth IEEE EMBS International Summer School on Biomedical Imaging}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IEEE EMBS}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Surgery Simulation}, OPTVOLUME = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette_eccv2000, ADDRESS = {Dublin, Ireland}, AUTHOR = {H. Delingette and J. Montagnat}, BOOKTITLE = {European Conference on Computer Vision (ECCV'2000)}, EDITOR = {D. Vernon}, MONTH = {June}, OPTNOTE = {}, NUMBER = {1843}, OPTORGANIZATION = {}, PAGES = {381-395}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {New Algorithms for Controlling Active Contours Shape and Topology}, OPTVOLUME = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, regularization}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/eccv.2000.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Dygai00, ADDRESS = {Paris, France}, AUTHOR = {I. Dygai and J. Stoeckel and O. Migneco and Ph. Desvignes and G. Malandain and N. Ayache and M. Chatel and F. Fauchon and M. Frenay and J. Darcourt and F. Bussière}, BOOKTITLE = {European Association of Nuclear Medicine Meeting}, OPTEDITOR = {}, MONTH = {August}, NOTE = {European Journal of Nuclear Medecine 27(8):1144}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {SPM Analysis Applied to MIBI-SPECT for the Diagnosis of Recurrent Oligodendrogliomas}, OPTVOLUME = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Etienne:CARS:00, OPTADDRESS = {}, AUTHOR = {D. Etienne and A. Stankoff and X. Pennec and S. Granger and A. Lacan and R. Derycke}, BOOKTITLE = {Proc. of CARS'2000}, EDITOR = {H.U. Lemke and M.W. Vannier and K. Inamura and A.G. Farman and K. Doi}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {927--931}, PUBLISHER = {Elsevier}, OPTSERIES = {}, TITLE = {A new approach for dental implant aided surgery. A pilot evaluation}, OPTVOLUME = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {validation, odontology}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{vidal:icpr:2000, ADDRESS = {Barcelone, Espagne}, AUTHOR = {S. Fernández-Vidal and E. Bardinet and G. Malandain and S. Damas and de la Blanca Capilla, N.P.}, BOOKTITLE = {International Conference on Pattern Recognition (ICPR 2000)}, OPTEDITOR = {}, MONTH = {septembre}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1712--1715}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Object Representation and Comparison Inferred from Its Medial Axis}, VOLUME = {1}, YEAR = {2000}, ABSTRACT = {The skeleton and its associated medial axis give a very compact representation of objects, even in the case of complex shapes and topologies. They are powerful shape descriptors, bridging the gap between low-level and highlevel object representations. Surprisingly, skeletons have been used in a relatively small number of applications. This work deals with the question of using the potential strength of the skeleton and the medial axis. From the medial axis, we build adequate attributed relational graphs to organize in a structured way informations about object shape and topology contained in the medial axis. This representation then permits to compare in a meaningful way various objects using a graph matching algorithm. Synthetic results are presented.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {euclidean skeleton, medial axis transform, topological characterisation, shape analysis, object representation, object comparison, ARG, graph matching}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/fernandez-icpr-2000.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Linguraru:Tabemed:00, ADDRESS = {Cluj Napoca}, AUTHOR = {M.G. Linguraru and I. Moisil}, BOOKTITLE = {Proceedings of International Conference on Technological Advancements in Biomedical Engineering and Medical Physics}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {CT Image Segmentation Graphic Tool}, OPTVOLUME = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:JMRM:2000, ADDRESS = {Kyoto, Japan}, AUTHOR = {Y. Machida and Y. Kassai and Y. Hamamura and González Ballester, M. A. and S. Kuhara and M. Miyazaki}, BOOKTITLE = {28th Meeting of the Japanese Journal of Magnetic Resonance in Medicine JMRM}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {High Speed Imaging Using Multiple RF Coils for FASE Non-Contrast-Enhanced Blood Flow Imaging (in Japanese)}, OPTVOLUME = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Migneco00, ADDRESS = {Paris, France}, AUTHOR = {O. Migneco and G. Malandain and A. Roche and I. Dygai and F. Bussière and N. Ayache and J. Darcourt}, BOOKTITLE = {European Association of Nuclear Medicine Meeting}, OPTEDITOR = {}, MONTH = {August}, NOTE = {European Journal of Nuclear Medecine 27(8):967}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Absolute calibration of HMPAO SPECT using Xenon-133}, OPTVOLUME = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:MRA:2000, ADDRESS = {Lyon, France}, AUTHOR = {M. Miyazaki and H. Takai and H. Kanazawa and González Ballester, M. A. and Y. Machida and S. Sugiura}, BOOKTITLE = {12th International Workshop on Magnetic Resonance Angiography}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Applications of Non-Enhanced MRA: a Dual-Phase Acquisition, Functional MRA, and an RF Subencoding Acquisition}, OPTVOLUME = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Montagnat-MICCAI2000, ADDRESS = {Pittsburgh, USA}, AUTHOR = {J. Montagnat and H. Delingette}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'2000)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {196--205}, PUBLISHER = {Springer}, SERIES = {Lectures Notes in Computer Science}, TITLE = {Space and Time Shape Constrained Deformable Surfaces for 4D Medical Image Segmentation}, VOLUME = {1935}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/miccai2000.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Ourselin:MICCAI:00, ADDRESS = {Pittsburgh, Penn, USA}, AUTHOR = {S. Ourselin and A. Roche and S. Prima and N. Ayache}, BOOKTITLE = {Third International Conference on Medical Robotics, Imaging And Computer Assisted Surgery (MICCAI 2000)}, EDITOR = {A.M. DiGioia and S. Delp}, MONTH = {octobre 11-14}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {557--566}, PUBLISHER = {Springer}, SERIES = {Lectures Notes in Computer Science}, TITLE = {Block Matching: A General Framework to Improve Robustness of Rigid Registration of Medical Images}, VOLUME = {1935}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, histology, MRI}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/ourselin-miccai-2000.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Picinbono00b, OPTADDRESS = {}, AUTHOR = {G. Picinbono and H. Delingette and N. Ayache}, BOOKTITLE = {Third International Conference on Medical Robotics, Imaging And Computer Assisted Surgery: MICCAI 2000}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {643--652}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Real-Time Large Displacement Elasticity for Surgery Simulation: Non-Linear Tensor-Mass Model}, OPTVOLUME = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, simulation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://www-sop.inria.fr/asclepios/Publications/Picinbono/miccai2000.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Picinbono00, ADDRESS = {San Francisco USA}, AUTHOR = {G. Picinbono and J.-C. Lombardo and H. Delingette and N. Ayache}, BOOKTITLE = {ICRA2000: IEEE International Conference Robotics and Automation}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {596--602}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Anisotropic Elasticity and Forces Extrapolation to Improve Realism of Surgery Simulation}, OPTVOLUME = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, simulation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://www-sop.inria.fr/asclepios/Publications/Picinbono/icra2000.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Prima:eccv:00, ADDRESS = {Dublin, Irlande}, AUTHOR = {S. Prima and S. Ourselin and N. Ayache}, BOOKTITLE = {Sixth European Conference on Computer Vision, ECCV'2000}, EDITOR = {D. Vernon}, MONTH = {June/July}, NOTE = {http://www.inria.fr/rrrt/RR-3841.html}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {685--701}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Computation of the Mid-Sagittal Plane in 3D Images of the Brain}, VOLUME = {1842-3}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Prima/tmi.final.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Prima/tmi.final.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Roche:ECCV:00, ADDRESS = {Dublin, Irlande}, AUTHOR = {A. Roche and A. Guimond and N. Ayache and J. Meunier}, BOOKTITLE = {Computer Vision - ECCV 2000}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {511-527}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Multimodal Elastic Matching of Brain Images}, VOLUME = {1843}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Roche/eccv00.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Roche:MICCAI:00, ADDRESS = {Pittsburgh, Pennsylvanie, USA}, AUTHOR = {A. Roche and X. Pennec and M. Rudolph and D. P. Auer and G. Malandain and S. Ourselin and L. M. Auer and N. Ayache}, BOOKTITLE = {Proc. of the 3rd Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'00)}, EDITOR = {A.M. DiGioia and S. Delp}, MONTH = {October 11-14}, NOTE = {Published in IEEE TMI 20(10), oct. 2001, p. 25-31}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {567--577}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Generalized Correlation Ratio for Rigid Registration of 3D Ultrasound with MR Images}, VOLUME = {1935}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, multimodal, magnetic resonance, ultrasound, correlation ratio}, URL = {https://www-sop.inria.fr/asclepios/Publications/Roche/miccai00.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Roche.Pennec.MICCAI00.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{soler-mmvr2000, ADDRESS = {Los Angeles}, AUTHOR = {L. Soler and J.-M. Clément and C. Koehl and H. Delingette and G. Malandain and N. Ayache and O. Dourthe and J. Marescaux}, BOOKTITLE = {Medicine Meets Virtual Reality (MMVR'2000)}, OPTEDITOR = {}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {IOS press}, SERIES = {Studies in Health Technology and Informatic}, TITLE = {An Automatic Virtual Patient Reconstruction from CT-Scans for Hepatic Surgical Planning}, OPTVOLUME = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, reconstruction}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{soler-mi2000, ADDRESS = {San Diego}, AUTHOR = {L. Soler and H. Delingette and G. Malandain and J. Montagnat and N. Ayache and J.-M. Clément and C. Koehl and O. Dourthe and D. Mutter and J. Marescaux}, BOOKTITLE = {Medical Imaging 2000}, OPTEDITOR = {}, MONTH = {February}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {SPIE}, PAGES = {246--255}, OPTPUBLISHER = {}, SERIES = {SPIE proceedings}, TITLE = {A Fully Automatic Anatomical, Pathological and Fonctionnal Segmentation from CT-scans for Hepatic Surgery}, OPTVOLUME = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, reconstruction}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{soler-al2000b, ADDRESS = {Vienne (Autriche)}, AUTHOR = {L. Soler and O. Dourthe and G. Malandain and J. Montagnat and H. Delingette and N. Ayache}, BOOKTITLE = {European Congress of Radiology}, OPTEDITOR = {}, MONTH = {mars}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A new 3D segmentation of liver neoplasm, portal venous system and parenchymal contours}, OPTVOLUME = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{soler-al2000a, ADDRESS = {Paris (France)}, AUTHOR = {L. Soler and C. Koehl and H. Delingette and G. Malandain and N. Ayache and D. Mutter and J. Leroy and B. Malassagne and J. Marescaux}, BOOKTITLE = {11ème Journées de printemps de l'ACHBT}, OPTEDITOR = {}, MONTH = {Juin}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Planification Chirurgicale Hépatique Assistée par Ordinateur}, OPTVOLUME = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Subsol00.1, OPTADDRESS = {}, AUTHOR = {G. Subsol and B. Mafart and D. Méline and A. Silvestre and de Lumley, M.A.}, BOOKTITLE = {L'identité humaine en question}, EDITOR = {P. Andrieux and D. Hadjouis and A. Dambricourt-Malassé}, OPTMONTH = {}, NOTE = {Extended proceedings of the workshop organized in May 1999.}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {92-101}, PUBLISHER = {Artcom}, SERIES = {Collection paléoanthropologie et paléopathologie osseuse}, TITLE = {Traitement d'images scanographiques appliqué à l'étude tridimensionnelle de l'évolution de la forme du crâne humain}, OPTVOLUME = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{betal99.1, ADDRESS = {Düsseldorf, Allemagne}, AUTHOR = {D. Betal and A. Guimond and N. Roberts}, BOOKTITLE = {NeuroImage (HBM'99)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Lateral cerebral ventricle volume variability and symmetry in healthy young males and females}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Bondiau:ForumCancero:99, ADDRESS = {Paris}, AUTHOR = {P.Y. Bondiau and G. Malandain and K. Benezery and A. Roche and R. Ferrand and D. Pontvert and J.L. Habrand and J.N. Bruneton}, BOOKTITLE = {Proc. du XIX Forum de Cancérologie}, OPTEDITOR = {}, MONTH = {31 mai- 2 juin}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Fusion Scanner / IRM entièrement automatique : perspective d'utilisation pour la radiothérapie}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:Schizo:1999, ADDRESS = {Santa Fe, New Mexico}, AUTHOR = {S. Chance and R. Craven and González Ballester, M. A. and T. Crow}, BOOKTITLE = {8th International Congress on Schizophrenia Research}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A New Method for MRI Assessment of Torque in Schizophrenic Brains}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Declerck-99.2, ADDRESS = {San Diego, CA, USA}, AUTHOR = {J. Declerck and N. Ayache and E.R. McVeigh}, BOOKTITLE = {SPIE Medical Imaging, vol. 3660}, OPTEDITOR = {}, MONTH = {February}, NOTE = {also research report INRIA RR 3535, Oct. 1998, http://www.inria.fr/rapports/sophia/RR-3535.html}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Use of a 4D planispheric transformation for the tracking and the analysis of LV motion with tagged MR images}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Tagged MRI, Heart, 4D, Deformations, Splines}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Declerck-99.5, ADDRESS = {Philadelphia, PA, USA}, AUTHOR = {J. Declerck and T. Denney and C. Öztürk and W. O'Dell and E.R. McVeigh}, BOOKTITLE = {International Society of Magnetic Resonance in Medicine}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1283}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {LV motion reconstruction from tagged MRI: a comparison}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette-sfgbm99, ADDRESS = {Paris}, AUTHOR = {H. Delingette}, BOOKTITLE = {Colloque Technologies pour la santé : Refléxions pour l'avenir}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {SFGBM}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {La Simulation Médicale}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, simulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/SFGBM99.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette_jnrr99, ADDRESS = {Montpellier}, AUTHOR = {H. Delingette}, BOOKTITLE = {Deuxièmes Journées de la Recherche en Robotique (JNRR'99)}, EDITOR = {E. Dombre and W. Khalil}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {109--118}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Simulation d'Interventions Chirurgicales}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, simulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/JNRR.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette-afig99, ADDRESS = {Reims}, AUTHOR = {H. Delingette}, BOOKTITLE = {12ème journées de l'association Française d'Infographie Graphique (AFIG'99)}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {37--48}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Simulation d'interventions chirurgicales}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, simulation}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette_ca99, OPTADDRESS = {}, AUTHOR = {H. Delingette and S. Cotin and N. Ayache}, BOOKTITLE = {Computer Animation (Computer Animation'99)}, EDITOR = {N. Thalmann and D. Thalmann}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {70--81}, PUBLISHER = {IEEE Computer Society}, OPTSERIES = {}, TITLE = {A Hybrid Elastic Model Allowing Real-Time Cutting Deformations and Force Feedback for Surgery Training and Simulation}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, simulation}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette_mmvr99, OPTADDRESS = {}, AUTHOR = {H. Delingette and S. Cotin and N. Ayache}, BOOKTITLE = {Medecine Meets Virtual Reality VII}, OPTEDITOR = {}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {139--151}, PUBLISHER = {IOS Press}, SERIES = {Interactive Technology and the New Paradigm for He althcare}, TITLE = {Efficient Linear Elastic Models of Soft Tissues for real time surgery simulation}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, simulation, Virtual Reality, Simulation, Surgery}, URL = {http://www.inria.fr/epidaure/personnel/cotin/MMVR4/MMVR4.html}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Giurgiu-Linguraru:Medinf:99, ADDRESS = {Sibiu}, AUTHOR = {P. Giurgiu and M.G. Linguraru}, BOOKTITLE = {Proceedings of 22nd Romanian Conference on Medical Informatics with International Participation}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Applying Computer Telephony in Healthcare: Medical Call Centre}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:Corsendonck:1999, ADDRESS = {Corsendonck, Belgium}, AUTHOR = {González Ballester, M. A. and M. Brady and A. Zisserman}, BOOKTITLE = {2nd International Workshop on Recent Advances in Brain Morphometry}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Narrowing Confidence Bounds Using Estimates of Partial Volume Effects}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Linguraru:Beyond:99, ADDRESS = {Sibiu}, AUTHOR = {M.G. Linguraru and I. Moisil}, BOOKTITLE = {Proceedings of International Conference on Engineering Research Strategies}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {65--72}, OPTPUBLISHER = {}, SERIES = {Acta Universitatis Cibiniensis}, TITLE = {Graphic Tools under XWindow for Image Segmentation}, VOLUME = {XXXVIII}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Linguraru:Medinf:99:1, ADDRESS = {Sibiu}, AUTHOR = {M.G. Linguraru and C.B. Zamfirescu}, BOOKTITLE = {Proceedings of 22nd Romanian Conference on Medical Informatics with International Participation}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Medical Decision Systems: A Human-Centred Approach}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Linguraru:Lesna:99, ADDRESS = {Stará Lesná}, AUTHOR = {M.G. Linguraru and C.B. Zamfirescu}, BOOKTITLE = {Proceedings of IEEE International Conference on Intelligent Engineering System}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {472--477}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {The Cultural Impact of Anthropocentric Systems in Medical Decision Making}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Lombardo99, ADDRESS = {Geneva Switzerland}, AUTHOR = {J.-C. Lombardo and M.-P. Cani and F. Neyret}, BOOKTITLE = {Computer Animation}, OPTEDITOR = {}, MONTH = {May 26-28}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Real-time collision detection for virtual surgery}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://www-sop.inria.fr/asclepios/Publications/Picinbono/lombardo.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00537512/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Montagnat-MICCAI99, ADDRESS = {Cambridge, UK}, AUTHOR = {J. Montagnat and H. Delingette and G. Malandain}, BOOKTITLE = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'99)}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {168--175}, PUBLISHER = {Springer}, SERIES = {Lectures Notes in Computer Science}, TITLE = {Cylindrical Echocardiographic Images Segmentation based on 3D Deformable Models}, VOLUME = {1679}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/miccai99.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Ourselin:WBIR:99, ADDRESS = {Bled (Slovénie)}, AUTHOR = {Sébastien Ourselin and Alexis Roche and Gérard Subsol and Xavier Pennec}, BOOKTITLE = {International Workshop on Biomedical Image Registration, WBIR'99}, EDITOR = {F. Pernus and S. Kovacic and H.S. Stiehl and M.A. Viergever}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1--13}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Automatic Alignment of Histological Sections}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, histology}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pennec:NSIP:99, ADDRESS = {June 20-23, Antalya, Turkey}, AUTHOR = {Xavier Pennec}, BOOKTITLE = {Proc. of Nonlinear Signal and Image Processing (NSIP'99)}, EDITOR = {A.E. Cetin and L. Akarun and A. Ertuzun and M.N. Gurcan and Y. Yardimci}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IEEE-EURASIP}, PAGES = {194--198}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Probabilities and Statistics on Riemannian Manifolds: Basic Tools for Geometric Measurements}, VOLUME = {1}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {statistics, geometry, Riemannian geometry}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.NSIP99.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.NSIP99.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pennec:MICCAI:99, ADDRESS = {Cambridge, UK}, AUTHOR = {Xavier Pennec and Pascal Cachier and Nicholas Ayache}, BOOKTITLE = {Proc. of 2nd Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'99)}, EDITOR = {C. Taylor and A. Colchester}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {597--605}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Understanding the ``Demon's Algorithm'': 3D Non-Rigid registration by Gradient Descent}, VOLUME = {1679}, YEAR = {1999}, OPTABSTRACT = {}, DOI = {10.1007/10704282_64}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, ultrasound, deformations}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.Cachier.MICCAI99.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.MICCAI99.a4.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Picinbono99, ADDRESS = {Laval France}, AUTHOR = {G. Picinbono and J.-C. Lombardo}, BOOKTITLE = {International Scientific Workshop on Virtual Reality and Prototyping}, OPTEDITOR = {}, MONTH = {June 3-4}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {117-125}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Extrapolation: a Solution for Force Feedback?}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Picinbono/gtrv99.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{ReyEUROMECH99, ADDRESS = {Visegrád, Hungary}, AUTHOR = {D. Rey and G. Subsol and H. Delingette and N. Ayache}, BOOKTITLE = {Information Processing in Medical Imaging, IPMI'99}, EDITOR = {A. Kuba and M. SM-amal and A. Todd-Pokropek}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {154-167}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Automatic Detection and Segmentation of Evolving Processes in 3D Medical Images: Application to Multiple Sclerosis}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, reconstruction, multiple sclerosis}, OPTURL = {}, URL-PUBLISHER = {http://link.springer.de/link/service/series/0558/bibs/1613/16130 154.htm}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{ReyIPMI99, ADDRESS = {Warsaw, Poland}, AUTHOR = {D. Rey and G. Subsol and H. Delingette and N. Ayache}, BOOKTITLE = {EUROMECH'99}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {185-188}, PUBLISHER = {IPPT PAN}, OPTSERIES = {}, TITLE = {Using Continuum Mechanics Operators for detection and Quantification of Evolving Processes in 3D Medical Images}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, reconstruction, multiple sclerosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Roche:MICCAI:99, ADDRESS = {Cambridge, UK}, AUTHOR = {A. Roche and G. Malandain and N. Ayache and S. Prima}, BOOKTITLE = {Proc. of 2nd Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'99)}, EDITOR = {C. Taylor and A. Colchester}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {555-566}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Towards a Better Comprehension of Similarity Measures used in Medical Image Registration}, VOLUME = {1679}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Roche/miccai99.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Samoila-Linguraru:Medinf:99, ADDRESS = {Sibiu}, AUTHOR = {A. Samoila and I. Moisil and M.G. Linguraru}, BOOKTITLE = {Proceedings of 22nd Romanian Conference on Medical Informatics with International Participation}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {An Educational Web Site for Medicine}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{soler-sfcd99, ADDRESS = {Paris}, AUTHOR = {L. Soler and J.-M. Clément and C. Koehl and H. Delingette and G. Malandain and N. Ayache and O. Dourthe and D. Mutter and J. Marescaux}, BOOKTITLE = {Journées de la société française de Chirurgie Digestive}, OPTEDITOR = {}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Planification Chirurgicale Hépatique Assistée par Ordinateur}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Subsol99.4, ADDRESS = {Maastricht (Pays-Bas)}, AUTHOR = {G. Subsol}, BOOKTITLE = {First Medtronic European Neuroscience Fair}, OPTEDITOR = {}, MONTH = {February}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Three-dimensional image processing for assistance in localizing the deep cerebral structures}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Subsol99.2, ADDRESS = {Créteil (France)}, AUTHOR = {G. Subsol and B. Mafart and D. Méline and de Lumley, M.A.}, BOOKTITLE = {L'identité humaine en question, nouvelles problématiques et nouvelles technologies en paléontologie humaine et en paléoanthropologie biologique}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {21-22}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Traitement d'images scanographiques appliqué à l'étude tridimensionnelle de l'évolution de la forme du crâne humain}, OPTVOLUME = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{ayache-icpr98, ADDRESS = {Brisbane, Australie}, AUTHOR = {Nicholas Ayache}, BOOKTITLE = {Int. Conf. on Pattern Recognition, ICPR'98}, OPTEDITOR = {}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1255--1256}, PUBLISHER = {IEEE}, OPTSERIES = {}, TITLE = {Medical Image Analysis: a challenge for computer vision research}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Calmon:MICCAI:98, ADDRESS = {Cambridge, USA}, AUTHOR = {G. Calmon and N. Roberts and P.R. Eldridge and J.-P. Thirion}, BOOKTITLE = {Proc. of First Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'98)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, NUMBER = {1496}, OPTORGANIZATION = {}, PAGES = {769--769}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Automatic quantification of changes in the volume of brain structures}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Calmon:MIUA:98, ADDRESS = {Leeds, UK}, AUTHOR = {G. Calmon and N. Roberts and Q. Gong and P.R. Eldridge and A.R. Brodbelt and B. Jones and J.-P. Thirion}, BOOKTITLE = {Proc. of Medical Image Understanding and Analysis (MIUA'98)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Automatic quantification of changes in tumor volume and mass effect following radiotherapy}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette-iccv98, ADDRESS = {Bombay, India}, AUTHOR = {H. Delingette}, BOOKTITLE = {Proceedings of the Sixth Int. Conf. on Computer Vision (ICCV'98)}, OPTEDITOR = {}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {311-316}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Initialization of Deformable Models from 3D Data}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/iccv98.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{fintzel98, ADDRESS = {Issy-les-Moulineaux, France}, AUTHOR = {K. Fintzel and J.-L. Dugelay and S. Valente and P. Dubois and H. Delingette}, BOOKTITLE = {Actes des 6èmes Journées de Travail du GT-RV}, OPTEDITOR = {}, MONTH = {12-13 mars}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {21--29}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Vers la Téléconférence Virtuelle}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, reconstruction}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:WBIA:1998, ADDRESS = {Santa Barbara}, AUTHOR = {González Ballester, M. A. and A. Zisserman and M. Brady}, BOOKTITLE = {Proc. of Workshop on Biomedical Image Analysis WBIA'98}, EDITOR = {B. Vemuri}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IEEE}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Combined Statistical and Geometrical 3D Segmentation and Measurement of Brain Structures}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:MICCAI:98, ADDRESS = {Cambridge, USA}, AUTHOR = {González Ballester, M. A. and A. Zisserman and M. Brady}, BOOKTITLE = {Proc. of First Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'98)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {499--508}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Measurement of Brain Structures based on Statistical and Geometrical 3D Segmentation}, VOLUME = {1496}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gonzalez/Gonzalez_MICCAI_1998.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gonzalez:Leeds:1998, ADDRESS = {Kent, UK}, AUTHOR = {González Ballester, M. A. and A. Zisserman and M. Brady}, BOOKTITLE = {First International Workshop on Recent Advances in Brain Morphometry}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Segmentation and Measurement of Brain Structures from MRI}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{guimond98.2, ADDRESS = {Cambridge, USA}, AUTHOR = {A. Guimond and J. Meunier and J.-P. Thirion}, BOOKTITLE = {Proc. of First Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'98)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {631--640}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Automatic Computation of Average Brain Models}, VOLUME = {1496}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, atlas}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{guimond98.1, ADDRESS = {Montréal, Canada}, AUTHOR = {A. Guimond and J. Webb and C. Mackay and N. Roberts and P. Eldridge and J. Meunier and J.-P. Thirion}, BOOKTITLE = {Human Brain Mapping Conference Proceedings}, EDITOR = {A. W. Toga and R. S. J. Frackowiak and J. C. Mazziotta}, MONTH = {May}, NOTE = {in NeuroImage 7(4)}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {704}, PUBLISHER = {Academic Press}, OPTSERIES = {}, TITLE = {Automatic Detection of Hippocampal Atrophy}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Karl-CVPR98, ADDRESS = {Santa Barbara}, AUTHOR = {K. Krissian and G. Malandain and N. Ayache and R. Vaillant and Y. Trousset}, BOOKTITLE = {Proc. of the IEEE Conf. on Computer Vision and Pattern Recognition, CVPR'98}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {722-727}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Model-Based Multiscale Detection of 3D Vessels}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Karl-WBIA98, ADDRESS = {Santa Barbara}, AUTHOR = {K. Krissian and G. Malandain and N. Ayache and R. Vaillant and Y. Trousset}, BOOKTITLE = {Proc. of Worshop on Biomedical Image Analysis WBIA'98}, EDITOR = {B. Vemuri}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {202-208}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Model-Based Multiscale Detection of 3D Vessels}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pennec:MICCAI:98, ADDRESS = {Cambridge, USA}, AUTHOR = {Xavier Pennec and Charles R.G. Guttmann and Jean-Philippe Thirion}, BOOKTITLE = {Proc. of First Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'98)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1107--1114}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Feature-based Registration of Medical Images: Estimation and Validation of the Pose Accuracy}, VOLUME = {1496}, YEAR = {1998}, OPTABSTRACT = {}, DOI = {10.1007/BFb0056300}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, magnetic resonance, validation, uncertainty}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.MICCAI98.pdf}, URL-PUBLISHER = {http://www.springerlink.com/openurl.asp?genre=article&issn=0302-9743&volume=1496&spage=1107}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.MICCAI98.letter.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Prima98a, ADDRESS = {Clermont-Ferrand, France}, AUTHOR = {S. Prima and J.-P. Thirion and G. Subsol}, BOOKTITLE = {Reconnaissance des Formes et Intelligence Artificielle, RFIA'98}, OPTEDITOR = {}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {175-184}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Analyse statistique de la dissymétrie dans les images médicales volumiques}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Prima:miccai:98, ADDRESS = {Cambridge, USA}, AUTHOR = {S. Prima and J.-P. Thirion and G. Subsol and N. Roberts}, BOOKTITLE = {Proc. of First Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'98)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {770--779}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Automatic Analysis of Normal Brain Dissymmetry of Males and Females in MR Images}, VOLUME = {1496}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://link.springer.de/link/service/series/0558/papers/1496/14960770.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Roche:MICCAI:98, ADDRESS = {Cambridge, USA}, AUTHOR = {Alexis Roche and Grégoire Malandain and Xavier Pennec and Nicholas Ayache}, BOOKTITLE = {Proc. of First Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'98)}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1115--1124}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {The Correlation Ratio as a New Similarity Measure for Multimodal Image Registration}, VOLUME = {1496}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, multimodal, correlation ratio}, URL = {https://www-sop.inria.fr/asclepios/Publications/Roche/miccai98.pdf}, URL-PUBLISHER = {http://www.springerlink.com/openurl.asp?genre=article&issn=0302-9743&volume=1496&spage=1115}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Roche/miccai98.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/cea-00333675/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{thiriet-al98b, ADDRESS = {Lyon, France}, AUTHOR = {M. Thiriet and G. Malandain}, BOOKTITLE = {XXIIIème congrès de la société de Biomécanique}, OPTEDITOR = {}, MONTH = {17-18 septembre}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Modélisation numérique de l'écoulement dans les anévrismes cérébraux}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{thiriet-al98, ADDRESS = {Toulouse, France}, AUTHOR = {M. Thiriet and S. Piperno and G. Malandain and P. Frey and J. Bittoun and A. Gaston}, BOOKTITLE = {$11^{\rm th}$ Conference of the European Society of Biomechanics}, OPTEDITOR = {}, MONTH = {8-11 juillet}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {20}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Computational models of flow in cerebral aneurisms}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Thirion98a, ADDRESS = {Santa Barbara, USA}, AUTHOR = {J.-P. Thirion and S. Prima and G. Subsol and N. Roberts}, BOOKTITLE = {IEEE Workshop on Biomedical Image Analysis, WBIA'98}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {74-83}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Statistical Analysis of Normal and Abnormal Dissymmetry in Volumetric Medical Images}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {statistics}, URL = {https://www-sop.inria.fr/asclepios/Publications/Thirion/Thirion98a.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{valente-eccv98, ADDRESS = {Freiburg, Germany}, AUTHOR = {S. Valente and J.-L. Dugelay and H. Delingette}, BOOKTITLE = {Workshop on Perception of Human Action, ECCV Conference}, OPTEDITOR = {}, MONTH = {6 juin}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {An Analysis/Synthesis Cooperation for Head Tracking and Video Face Cloning}, OPTVOLUME = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, reconstruction}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{ayache-brain, ADDRESS = {Karolinska institute, Suede}, AUTHOR = {N. Ayache}, BOOKTITLE = {International Workshop on Neuro-informatics}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Analysis of 3D Brain Images}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{ayache-asian, ADDRESS = {Katmandou, Népal}, AUTHOR = {N. Ayache}, BOOKTITLE = {Proceedings of ASIAN'97}, OPTEDITOR = {}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Medical Image Analysis and Simulation}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Ayache97, ADDRESS = {Hayama, Japan}, AUTHOR = {N. Ayache and S. Cotin and H. Delingette}, BOOKTITLE = {Proceedings of the Eighth International Symposium of Robotics Research}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Surgery simulation with visual and haptic feedback}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, simulation}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{bondiau-al97c, ADDRESS = {Grenoble, France}, AUTHOR = {P.-Y. Bondiau and G. Malandain}, BOOKTITLE = {CVRMed-MRCAS'97}, OPTEDITOR = {}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {705--714}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Eye Reconstruction and CT-Retinography Fusion for Proton Treatment Planning of Ocular Diseases}, VOLUME = {1205}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{bondiau-al97, ADDRESS = {Paris, France}, AUTHOR = {P.-Y. Bondiau and G. Malandain and N. Ayache and C. Zur and P. Chauvel and P. Gastaud}, BOOKTITLE = {103ème Congrès de la société française d'ophtalmologie}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {L'oeil virtuel}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{bondiau-al97b, ADDRESS = {Berlin, Germany}, AUTHOR = {P.-Y. Bondiau and G. Malandain and P. Chauvel and F. Peyrade and J.N. Bruneton}, BOOKTITLE = {1st Joint Annual Conference of the International Society for Computer Aided Surgery}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Automatic eye reconstruction for radiotherapy}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{CT97, ADDRESS = {Grenoble}, AUTHOR = {Guillaume Calmon and Jean-Philippe Thirion}, BOOKTITLE = {Traitement du Signal et des Images (GRETSI'97)}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Calcul de variation de volume de lésions dans des images médicales tridimensionnelles}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Colchester97, ADDRESS = {Grenoble (France)}, AUTHOR = {A. C. F. Colchester and J. Zhao and N. Dorward and G. Subsol and D. G. T. Thomas}, BOOKTITLE = {CVRMed/MRCAS}, EDITOR = {J. Troccaz and E. Grimson and R. Mösges}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {501-510}, OPTPUBLISHER = {}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Comparison of Phantom Target Localisation by Frame-Based Stereotaxy and by the VISLAN System}, VOLUME = {1205}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Declerck-97.3, OPTADDRESS = {}, AUTHOR = {J. Declerck and J. Feldmar and N. Ayache}, BOOKTITLE = {Computer Vision, Virtual Reality and Robotics in Medicine II - Medical Robotics and Computer Assisted Surgery III}, OPTEDITOR = {}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {33-42}, OPTPUBLISHER = {}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Definition of a 4D continuous polar transformation for the tracking and the analysis of LV motion}, VOLUME = {1205}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Matching, Heart, SPECT, Splines, Atlas}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Declerck-97.9, OPTADDRESS = {}, AUTHOR = {J. Declerck and J. Feldmar and N. Ayache}, BOOKTITLE = {Medical and Biological Engineering and Computing}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {685}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Tracking and analysis of left ventricular motion with 4D planispheric transformations}, VOLUME = {35}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Motion tracking, Heart, 4D}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Delingette-CVRMED97, OPTADDRESS = {}, AUTHOR = {H. Delingette}, BOOKTITLE = {Computer Vision, Virtual Reality and Robotics in Medicine}, OPTEDITOR = {}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {83--92}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Decimation of isosurfaces with Deformable Models}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/CVRMED.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{qcav97, ADDRESS = {Le Creusot, France}, AUTHOR = {H. Delingette and O. Seguin and R. Perrocheau and P. Ménégazzi}, BOOKTITLE = {Proceedings on the Conference on Quality Control with Artificial Vision (QCAV'97)}, EDITOR = {CEPADUES Ed.}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Accuracy evaluation of 3D reconstruction from CT-scan images for inspection of industrial parts}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/qcav.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{feldmar-al97b, ADDRESS = {Grenoble, France}, AUTHOR = {J. Feldmar and G. Malandain and N. Ayache and S. Fernández-Vidal and E. Maurincomme and Y. Trousset}, BOOKTITLE = {CVRMed-MRCAS'97}, OPTEDITOR = {}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {129--138}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Matching 3D MR Angiography Data and 2D X-ray Angiograms}, VOLUME = {1205}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Fidrich97, ADDRESS = {Utrecht}, AUTHOR = {Márta Fidrich}, BOOKTITLE = {Scale-Space Theory in Computer Vision}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {140-151}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Following feature lines across scale}, VOLUME = {1252}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{guimond97.1, ADDRESS = {Newport Beach, United-States}, AUTHOR = {Alexandre Guimond and Gérard Subsol and Jean Meunier and Jean-Philippe Thirion}, BOOKTITLE = {Medical Imaging}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {659--670}, OPTPUBLISHER = {}, SERIES = {SPIE Proceedings}, TITLE = {Automatic Exploration and Morphometry/Morphology Assessment of Medical Image Databases}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{guimond97.2, ADDRESS = {Nice, France}, AUTHOR = {Alexandre Guimond and Gérard Subsol and Jean Meunier and Jean-Philippe Thirion}, BOOKTITLE = {World Congress on Medical Physics and Biomedical Engineering}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Extraction of 3D Structures and Ranking According to Morphology}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{kkrissia-al97, ADDRESS = {Utrecht, The Netherlands}, AUTHOR = {K. Krissian and G. Malandain and N. Ayache}, BOOKTITLE = {Scale-Space Theory in Computer Vision (Scale-Space'97)}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {345--348}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Directional Anisotropic Diffusion Applied to Segmentation of Vessels in 3D Images}, VOLUME = {1252}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{migneco-al97c, ADDRESS = {Glasgow, Scotland}, AUTHOR = {O. Migneco and M. Benoit and G. Malandain and J.-P. Thirion and Ph. Robert and N. Ayache and F. Bussière and J. Darcourt}, BOOKTITLE = {European Association of Nuclear Medecine Meeting}, OPTEDITOR = {}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {SPECT memory activation thanks to non-rigid coregistration}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{migneco-al97b, ADDRESS = {Rennes, France}, AUTHOR = {O. Migneco and J. Darcourt and M. Benoit and G. Malandain and J.-P. Thirion and Ph. Robert and R. Vidal and Ph. Desvignes and J. Benoliel and N. Ayache and F. Bussière}, BOOKTITLE = {36eme Colloque de médecine nucléaire 1997}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Activation mnésique en TEMP}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{migneco-al97, ADDRESS = {Grenoble, France}, AUTHOR = {O. Migneco and J.-P. Thirion and M. Benoit and G. Malandain and P. Robert and N. Ayache and J. Darcourt}, BOOKTITLE = {CVRMed-MRCAS'97}, OPTEDITOR = {}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {487--490}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {SPECT memory activation studies thanks to non-rigid automated 3D image registration}, VOLUME = {1205}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Montagnat-CVPR97, ADDRESS = {San Juan, Puerto Rico}, AUTHOR = {J. Montagnat and H. Delingette}, BOOKTITLE = {Computer Vision and Pattern Recognition, CVPR'97}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {1041--1046}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A Hybrid Framework for Surface Registration and Deformable Models}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, reconstruction}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{montagnat-orasis97, ADDRESS = {La Colle-sur-Loup, France}, AUTHOR = {J. Montagnat and H. Delingette}, BOOKTITLE = {Proceedings of Sixth Orasis conference (ORASIS'97)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Reconstruction surfacique et segmentation robuste à base de maillages déformables}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, reconstruction}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://www-sop.inria.fr/asclepios/Publications/Montagnat/ORASIS97.pdf}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Montagnat-CVRMED97, OPTADDRESS = {}, AUTHOR = {J. Montagnat and H. Delingette}, BOOKTITLE = {Proceedings of the First Joint Conference CVRMed-MRCAS'97}, OPTEDITOR = {}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {13--22}, OPTPUBLISHER = {}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Volumetric Medical Images Segmentation using Shape Constrained Deformable Models}, VOLUME = {1205}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, reconstruction}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{montagnat-nice97, ADDRESS = {Nice, France}, AUTHOR = {J. Montagnat and H. Delingette and N. Ayache and J.M. Clément and C. Roy and Y. Russier and V. Tassetti and J. Marescaux}, BOOKTITLE = {Proceedings of World Congress on Medical Physics and Biomedical Engineering}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Liver Segmentation in Contrast Enhanced Helical CT-Scans}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/nice97.montagnat.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pennec:IRW:97, OPTADDRESS = {}, AUTHOR = {Xavier Pennec}, BOOKTITLE = {Proc of the First Image Registration Workshop, November 20-21 1997, Greenbelt, Maryland, USA}, EDITOR = {J. Le Moigne}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {CESDIS}, PAGES = {263--272}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Registration of Uncertain Geometric Features: Estimating the Pose and its Accuracy}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, uncertainty, validation, geometry}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.IRW97.a4.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{robert-al97, ADDRESS = {Puerto Rico}, AUTHOR = {L. Robert and G. Malandain}, BOOKTITLE = {Computer Vision and Pattern Recognition}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IEEE}, PAGES = {97--102}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Fast Binary Image Processing Using Binary Decision Diagrams}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{soler-orasis97, ADDRESS = {La Colle-sur-Loup, France}, AUTHOR = {L. Soler and G. Malandain and H. Delingette}, BOOKTITLE = {Proceedings of Sixth Orasis conference (ORASIS'97)}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Segmentation automatique : application aux angioscanners 3D du foie}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/orasis97.soler.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{soler-nice97, ADDRESS = {Nice, France}, AUTHOR = {L. Soler and G. Malandain and J. Montagnat and H. Delingette and N. Ayache and J.M. Clément and C. Roy and Y. Russier and V. Tassetti and J. Marescaux}, BOOKTITLE = {Proceedings of World Congress on Medical Physics and Biomedical Engineering}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {2}, OPTORGANIZATION = {}, PAGES = {788}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Automatic Segmentation of Portal Vein in CT-Scans of the Liver}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/nice97.soler.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{TC97b, OPTADDRESS = {}, AUTHOR = {Jean-Philippe Thirion and Guillaume Calmon}, BOOKTITLE = {Non Rigid and Articulated Motion Workshop (NAM '97) in conjunction with CVPR '97}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Measuring Lesion Growth from 3D Medical Images}, OPTVOLUME = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{BCA96a, ADDRESS = {Cambridge}, AUTHOR = {E. Bardinet and L.D. Cohen and N. Ayache}, BOOKTITLE = {4th European Conference on Computer Vision (ECCV'96)}, EDITOR = {Robert Cipolla}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Tracking medical 3D data with a deformable parametric model}, VOLUME = {vol 1}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{bondiau-al96, ADDRESS = {Toulouse, France}, AUTHOR = {P.-Y. Bondiau and G. Malandain and P. Chauvel}, BOOKTITLE = {35eme Congrès de la société française des physiciens d'hôpital}, OPTEDITOR = {}, MONTH = {6-8 juin}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Projet de reconstruction tridimensionnelle de l'oeil à partir des images scanneurs, IRM et de fundographie. Utilisation pour la protonthérapie des tumeurs oculaires}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{chauvel-al96, ADDRESS = {Berlin (Germany)}, AUTHOR = {P. Chauvel and W. Sauerwein and N. Bornfeld and W. Friedrichs and N. Brassart and A. Courdi and J. Hérault and J.-P. Pignol and P.-Y. Bondiau and G. Malandain}, BOOKTITLE = {First International Symposium on Special Aspects of Radiotherapy}, OPTEDITOR = {}, MONTH = {May 3--6}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Clinical and Technical Requirements for Proton Treatment Planning of Ocular Diseases}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Cotin96a, OPTADDRESS = {}, AUTHOR = {S. Cotin and H. Delingette and N. Ayache}, BOOKTITLE = {Visualization in Biomedical Computing, Proceedings}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Real Time Volumetric Deformable Models for Surgery Simulation}, VOLUME = {1131}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, simulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/vbc96.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Cotin96b, OPTADDRESS = {}, AUTHOR = {S. Cotin and H. Delingette and J.-M. Clement and V. Tassetti and J. Marescaux and N. Ayache}, BOOKTITLE = {Proceedings of the International Symposium on Computer and Communication Systems for Image Guided Diagnosis and Therapy, Computer Assisted Radiology (CAR'96)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Elsevier}, SERIES = {International Congress Series}, TITLE = {Volumetric Deformable Models for Simulation of Laparoscopic Surgery}, VOLUME = {1124}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, simulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/cas96.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Cotin96d, ADDRESS = {San Diego, USA}, AUTHOR = {S. Cotin and H. Delingette and J-M. Clément and V. Tassetti and J. Marescaux and N. Ayache}, BOOKTITLE = {Medecine Meets Virtual Reality IV}, OPTEDITOR = {}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {139-151}, PUBLISHER = {IOS Press}, SERIES = {Studies in Health Technology and Informatics}, TITLE = {Geometric and Physical Representations for a Simulator of Hepatic Surgery}, VOLUME = {29}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, simulation, Virtual Reality, Simulation, Surgery}, URL = {http://www.inria.fr/epidaure/personnel/cotin/MMVR4/MMVR4.html}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Cotin96c, OPTADDRESS = {}, AUTHOR = {S. Cotin and H. Delingette and J-M. Clément and V. Tassetti and J. Marescaux and N. Ayache}, BOOKTITLE = {Interface to Real and Virtual Worlds}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {139-148}, PUBLISHER = {AJIIMD}, OPTSERIES = {}, TITLE = {Simulation de chirurgie hépatique avec système de retour de forces}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, simulation, Virtual Reality, Simulation, Surgery}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/imrv96.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Declerck-96.6, OPTADDRESS = {}, AUTHOR = {J. Declerck and J. Feldmar and M.L. Goris and F. Betting}, BOOKTITLE = {Mathematical Methods in Biomedical Image Analysis}, OPTEDITOR = {}, MONTH = {June}, NOTE = {(Aussi Rapport de Recherche INRIA numéro 2770)}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Automatic Registration and Alignment on a Template of Cardiac Stress & Rest SPECT Images}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Matching, Heart, SPECT, Splines, Atlas}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{feldmar-al96, ADDRESS = {San Francisco, California, USA}, AUTHOR = {J. Feldmar and G. Malandain and J. Declerck and N. Ayache}, BOOKTITLE = {Mathematical Methods in Biomedical Image Analysis}, OPTEDITOR = {}, MONTH = {June 21-22}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Extension of the ICP Algorithm to Non-Rigid Intensity-Based Registration of 3D Volumes}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, deformations}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{vidal-al96, ADDRESS = {Rennes, France}, AUTHOR = {S. Fernández-Vidal and G. Malandain}, BOOKTITLE = {10ème Congrès Reconnaissance des Formes et Intelligence Artificielle (RFIA'96)}, OPTEDITOR = {}, MONTH = {16-18 janvier}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {AFCET - AFIA}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Squelettes euclidiens d'objets $n$-dimensionnels}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{mfidrich, ADDRESS = {Lyon}, AUTHOR = {Márta Fidrich}, BOOKTITLE = {Discrete Geometry for Computer Imagery}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Iso-surface Extraction in 4D with Applications related to Scale Space}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {iso-surface, scale space}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gilles96a, ADDRESS = {Hamburg (D)}, AUTHOR = {S. Gilles and M. Brady and J.-P. Thirion and N. Ayache}, BOOKTITLE = {Visualization in Biomedical Computing, VBC'96}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Bias Field Correction and Segmentation of MR Images}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Goris-96.7, OPTADDRESS = {}, AUTHOR = {M.L. Goris and J. Declerck and J. Feldmar and N. Ayache and W. Pace}, BOOKTITLE = {Western Regional Meeting, Society of Nuclear Medicine}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Quantification of myocardial pefusion studies after a morphological match to a template}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Matching, Heart, SPECT, Atlas}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{migneco, ADDRESS = {Lyon, France}, AUTHOR = {O. Migneco and J.-P. Thirion and M. Benoit and G. Malandain and P. Robert and N. Ayache and J. Darcourt}, BOOKTITLE = {Actes du congrès sur la Méthodologie en imagerie fonctionnelle cérébrale}, OPTEDITOR = {}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Une étude TEMP d'activation mnésique réalisée grâce à des recalages d'images 3D}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pennec:Leeds:96, OPTADDRESS = {}, AUTHOR = {Xavier Pennec}, BOOKTITLE = {Image Fusion and Shape Variability Techniques (16th Leeds Annual Statistical Workshop)}, EDITOR = {K.V. Mardia and C.A. Gill and Dryden I.L.}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {University of Leeds, UK}, PAGES = {178-185}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Multiple Registration and Mean Rigid Shape - Application to the 3D case}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, multiple registration, shape, statistics}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.Leeds96.a4.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pennec:ORASIS:96, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Nicholas Ayache}, BOOKTITLE = {Journées ORASIS}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {111-116}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Quelques problèmes posés par la gestion des primitives géométriques en vision par ordinateur}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {geometry, statistics, uncertainty, Riemannian geometry}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.Orasis96.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pennec:CVPR:96, ADDRESS = {San Francisco, Cal, USA}, AUTHOR = {Xavier Pennec and Nicholas Ayache}, BOOKTITLE = {IEEE Conf. on Computer Vision and Pattern Recognition (CVPR'96)}, OPTEDITOR = {}, MONTH = {June}, NOTE = {Published in J. of Math. Imag. and Vision 9(1), July 1998, p. 49-67}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {484--491}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Randomness and Geometric Features in Computer Vision}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, DOI = {10.1109/CVPR.1996.517116}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {geometry, statistics, registration, uncertainty, Riemannian geometry}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.CVPR96.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Ronngren-PADS96, OPTADDRESS = {}, AUTHOR = {R. Rönngren and M. Liljenstam and J. Montagnat and R. Ayani}, BOOKTITLE = {10th Workshop on Parallel And Distributed Simulation}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Transparent Incremental State Saving in Time Warp Parallel Discrete Event Simulation}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Subsol96.3, ADDRESS = {Leeds (UK)}, AUTHOR = {G. Subsol and J.-Ph. Thirion and N. Ayache}, BOOKTITLE = {16th L.A.S.R. Workshop Image Fusion And Shape Variability Techniques}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {115-122}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A General Scheme for Automatically Building 3D Morphometric Anatomical Atlases: application to a Skull and a Brain Atlas}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, atlas}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Subsol96.4, ADDRESS = {Hamburg (D)}, AUTHOR = {G. Subsol and J.-Ph. Thirion and N. Ayache}, BOOKTITLE = {VBC'96}, EDITOR = {K. H. Höhne}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Application of an Automatically Built 3D Morphometric Brain Atlas: Study of Cerebral Ventricle Shape}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, atlas}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Subsol96.2, ADDRESS = {Paris (France)}, AUTHOR = {G. Subsol and J.-Ph. Thirion and N. Ayache}, BOOKTITLE = {Computer Assisted Radiology}, EDITOR = {H. Lemke and K. Inamura and A. Farman and F. Vannier}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {339-344}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Some applications of an automatically built 3D morphometric skull atlas}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {atlas}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Subsol96.1, ADDRESS = {Rennes}, AUTHOR = {G. Subsol and J.-Ph. Thirion and N. Ayache}, BOOKTITLE = {Reconnaissance des Formes et Intelligence Artificielle}, OPTEDITOR = {}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {AFCET/AFIA}, PAGES = {159-168}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Une méthode générale pour construire automatiquement des atlas anatomiques morphométriques : application à un atlas du crâne}, VOLUME = {1}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {skull, atlas}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Subsol95.3, ADDRESS = {Rennes (France)}, AUTHOR = {G. Subsol and J.-P. Thirion and N. Ayache}, BOOKTITLE = {Actes du 10eme congrès en Reconnaissance des formes et Intelligence Artificielle (RFIA'96)}, OPTEDITOR = {}, MONTH = {January}, NOTE = {Accepté pour publication.}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Une méthode générale pour construire automatiquement des atlas anatomiques morphométriques : application à un atlas du crâne}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Thirion96a, ADDRESS = {San Francisco, California, USA}, AUTHOR = {J.-P. Thirion}, BOOKTITLE = {Computer Vision and Pattern Recognition, CVPR'96}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Non-Rigid Matching using Demons}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, deformations}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Thirion96c, ADDRESS = {Hamburg (D)}, AUTHOR = {J.-P. Thirion and G. Subsol and D. Dean}, BOOKTITLE = {Visualization in Biomedical Computing, VBC'96}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Cross Validation of Three Inter-Patients Matching Methods}, OPTVOLUME = {}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, validation}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{West.etal:MedIm:96, ADDRESS = {Newport Beach, California, USA}, AUTHOR = {J. West and J.M. Fitzpatrick and M.Y. Wang and B.M. Dawant and Maurer, Jr., C.R. and R.M. Kessler and R.J. Maciunas and C. Barillot and D. Lemoine and A. Collignon and F. Maes and P. Suetens and D. Vandermeulen and van den Elsen, P.A. and P.F. Hemler and S. Napel and T.S. Sumanaweera and B. Harkness and D.L.G. Hill and C. Studholme and G. Malandain and X. Pennec and M.E. Noz and Maguire, Jr., G.Q. and M. Pollack and C.A. Pelizzari and R.A. Robb and D. Hanson and R.P. Woods}, BOOKTITLE = {Medical Imaging 1996: Image Processing}, OPTEDITOR = {}, MONTH = {February 10-15}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, SERIES = {SPIE proceedings series}, TITLE = {Comparison and evaluation of retrospective intermodality image registration techniques}, VOLUME = {2710}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, multimodal, validation}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{ayache-bmvc, ADDRESS = {Birmingham}, AUTHOR = {N. Ayache}, BOOKTITLE = {Proceedings of the British Machine Vision Conference}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Medical Computer Vision, Virtual Reality and Robotics}, OPTVOLUME = {}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Feldmar_inserm, ADDRESS = {Paris}, AUTHOR = {N. Ayache and J. Feldmar and G. Malandain and E. Maurincomme and C. Picard and Y. Trousset}, BOOKTITLE = {Mini colloque INSERM de radiologie interventionnelle}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Recalage sans cadre stéréotaxique d'images volumiques et projectives en radiologie interventionnelle}, OPTVOLUME = {}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{BCA95a, ADDRESS = {Nice, France}, AUTHOR = {E. Bardinet and L.D. Cohen and N. Ayache}, BOOKTITLE = {Proceedings of the Conference on Computer Vision, Virtual Reality and Robotics in Medecine (CVRMed'95)}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Superquadrics and free-form deformations: a global model to fit and track 3D medical data}, VOLUME = {905}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {FFD, Superquadrique, Deformations, motion tracking}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{BCA95e, ADDRESS = {Coral Gables, Florida}, AUTHOR = {E. Bardinet and L.D. Cohen and N. Ayache}, BOOKTITLE = {IEEE Symposium on Computer Vision}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Tracking medical 3D data with a parametric deformable model}, OPTVOLUME = {}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Feldmar2, ADDRESS = {Brest}, AUTHOR = {F. Betting and J. Feldmar}, BOOKTITLE = {XIVth International Conference on Information Processing in Medical Imaging (IPMI'95)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {275--286}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {3D-2D projective registration of anatomical surfaces with their projections}, OPTVOLUME = {}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Feldmar3, ADDRESS = {Nice}, AUTHOR = {F. Betting and J. Feldmar and N. Ayache and F. Devernay}, BOOKTITLE = {Proceedings of the Conference on Computer Vision, Virtual Reality and Robotics in Medecine (CVRMed'95)}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {30--39}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {A new framework for fusing stereo images with volumetric medical images}, VOLUME = {905}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette_iti95, ADDRESS = {Cannes, France}, AUTHOR = {J.N. Bruneton and F. Schikli and B. Padovani and H. Delingette and Catherine Maestro}, BOOKTITLE = {Actes du 1er Colloque sur l'Imagerie et Traitement d'Images}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Volumétrie tumorale obtenue à partir d'images scannographiques}, OPTVOLUME = {}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, medical}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Cotin95_toulouse, ADDRESS = {Toulouse, France}, AUTHOR = {S. Cotin and H. Delingette and N. Ayache}, BOOKTITLE = {Actes du Congrès Mondial de Télémedecine}, OPTEDITOR = {}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {New Perspectives for Realistic Simulations of Hepatic Surgery}, OPTVOLUME = {}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, simulation}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Declerck95.1, ADDRESS = {Nice (France)}, AUTHOR = {J. Declerck and G. Subsol and J.-P. Thirion and N. Ayache}, BOOKTITLE = {Proceedings of the Conference on Computer Vision, Virtual Reality and Robotics in Medecine (CVRMed'95)}, EDITOR = {N. Ayache}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {153-162}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Automatic retrieval of anatomical structures in 3D medical images}, VOLUME = {905}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Feldmar1, ADDRESS = {Cambridge, Ma}, AUTHOR = {J. Feldmar and N. Ayache and F. Betting}, BOOKTITLE = {IEEE Proceedings of the Fifth International Conference on Computer Vision (ICCV'95)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {549--556}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {3D-2D projective registration of free-form curves and surfaces}, OPTVOLUME = {}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{vidal-al95, ADDRESS = {Uppsala, Sweden}, AUTHOR = {S. Fernández-Vidal and G. Malandain}, BOOKTITLE = {9th Scandinavian Conference on Image Analysis (SCIA'95)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IAPR}, PAGES = {517--524}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Digital Euclidean skeleton in n-D}, OPTVOLUME = {}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Fidrich95c, ADDRESS = {Nordfjordeid, Norway}, AUTHOR = {Márta Fidrich and Jacques Feldmar and J.-P. Thirion}, BOOKTITLE = {Computer Vision and Applied Geometry}, EDITOR = {Theo Moons}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Topological Changes in Scale Space as a Function of Image Transformations}, OPTVOLUME = {}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Fidrich95b, ADDRESS = {Prague}, AUTHOR = {Márta Fidrich and J.-P. Thirion}, BOOKTITLE = {International Conference on Computer Analysis of Images and Patterns}, EDITOR = {V. Hlavác and R. Sára}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {637-642}, OPTPUBLISHER = {}, SERIES = {LNCS}, TITLE = {Multiscale Extraction of Features from Medical Images}, VOLUME = {970}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {scale space}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Fidrich95a, ADDRESS = {Nice}, AUTHOR = {Márta Fidrich and J.-P. Thirion}, BOOKTITLE = {Proceedings of the Conference on Computer Vision, Virtual Reality and Robotics in Medecine (CVRMed'95)}, EDITOR = {N. Ayache}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {358-364}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Multiscale Representation and Analysis of Features from Medical Images}, VOLUME = {905}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {scale space}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{goris-al95, ADDRESS = {Cannes France}, AUTHOR = {M.L. Goris and G. Malandain and I. Marque}, BOOKTITLE = {2nd International Conference of Nuclear Cardiology}, OPTEDITOR = {}, MONTH = {April}, NOTE = {also in Journal of Nuclear Cardiology 1995; 2: S82}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Automatic registration of Myocardial Perfusion study using a Potential Based Rigid Transformation}, OPTVOLUME = {}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{malandain-al95d, ADDRESS = {Clermont-Ferrand, France}, AUTHOR = {G. Malandain and S. Fernández-Vidal}, BOOKTITLE = {5th Discrete Geometry for Computer Imagery (DGCI'95)}, OPTEDITOR = {}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {199--208}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Topologically correct skeleton in $n-D$}, OPTVOLUME = {}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pennec:ICCV:95, ADDRESS = {Cambridge, Ma}, AUTHOR = {Xavier Pennec and Jean-Philippe Thirion}, BOOKTITLE = {Proc. of the 5th Int. Conf on Comp. Vision (ICCV'95)}, OPTEDITOR = {}, MONTH = {June}, NOTE = {Published in Int. J. of Comp. Vision 25(3), 1997, p. 203-229}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {557--562}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Validation of 3D Registration Methods based on Points and Frames}, OPTVOLUME = {}, YEAR = {1995}, OPTABSTRACT = {}, DOI = {10.1109/ICCV.1995.466890}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, uncertainty, validation}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.ICCV95.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Cotin95, OPTADDRESS = {}, AUTHOR = {G. Quatrehomme and H. Delingette and S. Cotin and G. Subsol and M. Fidrich and P. Bailet and G. Grevin and A. Ollier}, BOOKTITLE = {International Association for Craniofacial Identification}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A Fully Tridimensional Method for Facial Reconstruction based on Deformable Models}, OPTVOLUME = {}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, medical}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Subsol95.2, ADDRESS = {Baltimore}, AUTHOR = {G. Subsol and J.-P. Thirion and N. Ayache}, BOOKTITLE = {Proceedings of the Conference on Medical Robotics and Computer Assisted Surgery (MRCAS'95)}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A General Scheme for Automatically Building 3D Morphometric Anatomical Atlases: application to a Skull Atlas}, OPTVOLUME = {}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, atlas}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Thirion95d, ADDRESS = {Baltimore}, AUTHOR = {J.-P. Thirion}, BOOKTITLE = {Proceedings of the Conference on Medical Robotics and Computer Assisted Surgery (MRCAS'95)}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Fast Non-Rigid Matching of 3D Medical Images}, OPTVOLUME = {}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, deformations}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Thirion95e, ADDRESS = {Boston}, AUTHOR = {J.-P. Thirion}, BOOKTITLE = {IBC's 3rd Annual Multiple Sclerosis Conference}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Software to Assist in Monitoring Treatment}, OPTVOLUME = {}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{bac94, ADDRESS = {Paris}, AUTHOR = {S. Benayoun and N. Ayache and I. Cohen}, BOOKTITLE = {AFCET'94, 9ème Congrès Reconnaissance des Formes et Intelligence Artificielle}, OPTEDITOR = {}, MONTH = {Janvier}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Mouvement de structures 2D déformables : Utilisation de caractéristiques géométriques différentielles}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00532674/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette_mnao94, ADDRESS = {Austin, Texas}, AUTHOR = {H. Delingette}, BOOKTITLE = {IEEE Workshop of Non-Rigid and Articulated Objects}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Adaptive and Deformable models based on Simplex Meshes}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/mnao.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette_eccv94, ADDRESS = {Stockholm, Sweden}, AUTHOR = {H. Delingette}, BOOKTITLE = {3rd European Conference on Computer Vision (ECCV'94)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Intrinsic Stabilizers of planar curves}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, regularization}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/eccv94.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette_cvpr94, ADDRESS = {Seattle, USA}, AUTHOR = {H. Delingette}, BOOKTITLE = {Proc. of Int. Conf. on Computer Vision and Pattern Recognition (CVPR'94)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {856-857}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Simplex Meshes: a General Representation for 3D Shape Reconstruction}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/cvpr94.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{DSCP94.3, OPTADDRESS = {}, AUTHOR = {Hervé Delingette and Gérard Subsol and Stéphane Cotin and Jérôme Pignon}, BOOKTITLE = {Visualization in Biomedical Computing (VBC'94)}, OPTEDITOR = {}, INSTITUTION = {INRIA}, MONTH = {octobre}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {607--618}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A Craniofacial Surgery Simulation Testbed}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, simulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/vbc.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette_imrv_94, ADDRESS = {Montpellier}, AUTHOR = {H. Delingette and G. Subsol and S. Cotin and J. Pignon}, BOOKTITLE = {Interface des Mondes Reels et Virtuels (IMRV'94)}, OPTEDITOR = {}, INSTITUTION = {I.N.R.I.A.}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {399--408}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Simulation de chirurgie craniofaciale et realite virtuelle}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, simulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/imrv94.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{feldmar-ayache-cvpr94, ADDRESS = {Seattle, USA}, AUTHOR = {J. Feldmar and N. Ayache}, BOOKTITLE = {Computer Vision and Pattern Recognition (CVPR'94)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {496--501}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Locally Affine Registration of Free-Form Surfaces}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{afcet94_alexis, ADDRESS = {Paris}, AUTHOR = {Alexis Gourdon and Nicholas Ayache}, BOOKTITLE = {AFCET'94, 9ème Congrès Reconnaissance des Formes et Intelligence Artificielle}, OPTEDITOR = {}, MONTH = {Janvier}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Recalage d'une courbe sur une surface en utilisant des propriétés différentielles}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{herlin-eccv94, OPTADDRESS = {}, AUTHOR = {I. L. Herlin and D. Béréziat and G. Giraudon and C. Nguyen and C. Graffigne}, BOOKTITLE = {Third European Conference on Computer Vision}, OPTEDITOR = {}, MONTH = {May 2-6}, NOTE = {Stockholm, Sweden}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Segmentation of echocardiographic images with Markov random fields}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00532677/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette_cad94, ADDRESS = {Pittsburgh, PA}, AUTHOR = {K. Higuchi and H. Delingette and M. Hébert and K. Ikeuchi}, BOOKTITLE = {Proceedings of 2nd IEEE Workshop on CAD-based Vision}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Merging multiple views using a spherical representation}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, reconstruction}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{malandain-al94a, ADDRESS = {Stockholm, Sweden}, AUTHOR = {G. Malandain and S. Fernández-Vidal and J.-M. Rocchisani}, BOOKTITLE = {3rd European Conference on Computer Vision (ECCV'94)}, OPTEDITOR = {}, MONTH = {May 2--6}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {131--136}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Improving Registration of 3-D Medical Images Using a Mechanical Based Method}, VOLUME = {801}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{malandain-al94c, ADDRESS = {Jérusalem, Israël}, AUTHOR = {G. Malandain and S. Fernández-Vidal and J.-M. Rocchisani}, BOOKTITLE = {12th International Conference on Pattern Recognition (ICPR'94)}, OPTEDITOR = {}, MONTH = {October 9--13}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IAPR}, PAGES = {579--581}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Rigid Registration of 3-D Objects by Motion Analysis}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{nastar-wbia, ADDRESS = {Seattle}, AUTHOR = {Chahab Nastar and Nicholas Ayache}, BOOKTITLE = {Proceedings of the IEEE Workshop on Biomedical Image Analysis}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Classification of Non-rigid Motion in 3D Images using Physics-Based Vibration Analysis}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Pennec:SPMCB:94, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Nicholas Ayache}, BOOKTITLE = {Shape and Pattern Matching in Computational Biology -- Proc. First Int. Workshop, Seattle, Wash, June 20, 1994}, EDITOR = {A. Califano and I. Rigoutsos and H.J. Wolson}, OPTMONTH = {}, NOTE = {Published in Bioinformatics 14(6), 1998, p. 516-522}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {25--40}, PUBLISHER = {Plenum Publishing}, OPTSERIES = {}, TITLE = {An ${{\cal O}}(n^2)$ Algorithm for 3D Substructure Matching of Proteins}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, protein structure}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.WSPMCB94.ps.gz}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Subsol94.2, ADDRESS = {Jerusalem (Israel)}, AUTHOR = {Gérard Subsol and Jean-Philippe Thirion and Nicholas Ayache}, BOOKTITLE = {The 12th International Conference on Pattern Recognition}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IAPR}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Non-Rigid Registration for Building 3D Anatomical Atlases}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, atlas, deformations}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Subsol94.3, OPTADDRESS = {}, AUTHOR = {Gérard Subsol and Jean-Philippe Thirion and Nicholas Ayache}, BOOKTITLE = {Visualization in Biomedical Computing '94}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Steps Towards Automatic Building of Anatomical Atlases}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {atlas}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Thirion94b, ADDRESS = {Seattle}, AUTHOR = {J.-P. Thirion}, BOOKTITLE = {IEEE conf. on Computer Vision and Pattern Recognition}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Extremal Points : definition and application to 3D image registration}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Thirion94e, ADDRESS = {Herzliya, Israel}, AUTHOR = {J.-P. Thirion}, BOOKTITLE = {France-Israel computer graphics and geometric modeling workshop}, OPTEDITOR = {}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Geometric Modeling and 3D Medical Images}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Thirion94a, ADDRESS = {Stanford}, AUTHOR = {J.-P. Thirion}, BOOKTITLE = {AAAI symposium: Application of Computer Vision in Medical Image Processing}, OPTEDITOR = {}, MONTH = {March}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {18--21}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Steps toward the automatic labeling of 3D medical images}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Thirion94c, ADDRESS = {Seattle}, AUTHOR = {J.-P. Thirion}, BOOKTITLE = {IEEE Workshop on Biomedical Image Analysis}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {The Extremal Mesh and the Understanding of 3D Surfaces}, OPTVOLUME = {}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{ayache93b, OPTADDRESS = {}, AUTHOR = {N. Ayache and A. Guéziec and J.-P. Thirion}, BOOKTITLE = {1st Asian Conference on Computer Vision, ACCV'93}, OPTEDITOR = {}, MONTH = {November}, NOTE = {Osaka, Japon}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Accurate and Robust Registration of 3D medical images using crest lines}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Ayache-Gueziec-Thirion-Gourdon:SPIE93, ADDRESS = {San Diego, California, USA}, AUTHOR = {N. Ayache and A. Guéziec and J.-P. Thirion and A. Gourdon}, BOOKTITLE = {Proceedings of SPIE'93, Mathematical Methods in Medical Imaging II}, OPTEDITOR = {}, MONTH = {July 14-15}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {60--71}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Evaluating 3D Registration of CT-Scan Images Using Crest Lines}, VOLUME = {2035-06}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{isaacSCIA93, ADDRESS = {Tromso, Norway}, AUTHOR = {Isaac Cohen}, BOOKTITLE = {Proceedings of the 8th Scandinavian Conference on Image Analysis}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IAPR}, PAGES = {523--530}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Nonlinear Variational Method for Optical Flow Computation}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Cohen_Bardinet_Ayache:spie93, ADDRESS = {San Diego, California, USA}, AUTHOR = {Laurent D. Cohen and Eric Bardinet and Nicholas Ayache}, BOOKTITLE = {Proceedings of SPIE'93, Geometric Methods in Computer Vision}, OPTEDITOR = {}, MONTH = {July}, NOTE = {Available as INRIA Research Report 1824, December 1992}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Reconstruction of Digital Terrain Model with a Lake}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{iccv_delingette, ADDRESS = {Berlin}, AUTHOR = {H. Delingette and M. Hebert and K. Ikeuchi}, BOOKTITLE = {Proceedings of the Fourth International Conference on Computer Vision (ICCV'93)}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IEEE}, PAGES = {103--112}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A Spherical Representation for the Recognition of Curved Objects}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, recognition}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette_iuw, OPTADDRESS = {}, AUTHOR = {H. Delingette and M. Hébert and K. Ikeuchi}, BOOKTITLE = {Image Understanding Workshop}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {547--838}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A Spherical Representation for the recognition of curved objects}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, recognition}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette_ca93, OPTADDRESS = {}, AUTHOR = {H. Delingette and Y. Watanabe and Y. Suenaga}, BOOKTITLE = {Models and Techniques in Computer Animation (Computer Animation'93)}, EDITOR = {N. Thalmann and D. Thalmann}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {13--28}, PUBLISHER = {Springer}, OPTSERIES = {}, TITLE = {Simplex based animation}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/ca_paper.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{GueziecAndre:ICCV93, ADDRESS = {Berlin}, AUTHOR = {André Guéziec}, BOOKTITLE = {Proceedings of the Fourth International Conference on Computer Vision (ICCV'93)}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IEEE}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Large Deformable Splines, Crest Lines and Matching}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gueziec&Ayache:SPIE93, ADDRESS = {San Diego, California, USA}, AUTHOR = {A. Guéziec and N. Ayache}, BOOKTITLE = {Proceedings of SPIE'93, Geometric Methods in Computer Vision II}, OPTEDITOR = {}, MONTH = {July 12-13}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {316--327}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Large Deformable Splines, Crest Lines and Matching}, VOLUME = {2031-28}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gueziec&Ayache:CVPR93, ADDRESS = {New York, USA}, AUTHOR = {A. Guéziec and N. Ayache}, BOOKTITLE = {Proceedings of the conference on Computer Vision and Pattern Recognition}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IEEE}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {New Developments On Geometric Hashing for Matching Curves}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{herlin93, ADDRESS = {Dijon}, AUTHOR = {I. L. Herlin}, BOOKTITLE = {Symposium échocardiographie et analyse d'images ventriculaires}, OPTEDITOR = {}, MONTH = {25--26 Mars}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Localiser et suivre les contours d'une cavité cardiaque dans une séquence d'images}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{ih-ic-av-hy93, ADDRESS = {Mulhouse, France}, AUTHOR = {I. L. Herlin and I. Cohen and A. Verroust and H. Yahia}, BOOKTITLE = {Quatrièmes Journées ORASIS}, OPTEDITOR = {}, MONTH = {11--14 Octobre}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {GDR-PRC Communication Homme--Machine, Pôle Vision}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Détection, localisation et modélisation de vortex dans les images satellites NOAA}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00437407/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{HG93, ADDRESS = {New York, USA}, AUTHOR = {I. L. Herlin and G. Giraudon}, BOOKTITLE = {Proceedings of the conference on Computer Vision and Pattern Recognition}, OPTEDITOR = {}, MONTH = {June 15-17}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IEEE}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Use of temporal information in a segmentation algorithm of ultrasound images}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {ultrasound}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{mongaCVPR93, ADDRESS = {New York, USA}, AUTHOR = {O. Monga and S. Benayoun}, BOOKTITLE = {Proceedings of the conference on Computer Vision and Pattern Recognition}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IEEE}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Using differential geometry in $R ^4$ to extract typical surface features}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{NastarSPIE, ADDRESS = {San Diego, California, USA}, AUTHOR = {Chahab Nastar and Nicholas Ayache}, BOOKTITLE = {Proceedings of SPIE'93, Geometric Methods in Computer Vision II}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A Physically Based Analysis of Deformations in 3D Images}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{NastarDIJON, ADDRESS = {Dijon}, AUTHOR = {Chahab Nastar and Nicholas Ayache}, BOOKTITLE = {soumis au Symposium Echocardiographie et Analyse d'Images Ventriculaires}, OPTEDITOR = {}, MONTH = {Mars}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Applications de modèles déformables physiques a l'analyse des images échocardiographiques}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Nastar, ADDRESS = {Berlin}, AUTHOR = {Chahab Nastar and Nicholas Ayache}, BOOKTITLE = {Proceedings of the Fourth International Conference on Computer Vision (ICCV'93)}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IEEE}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Fast Segmentation, Tracking, and Analysis of Deformable Objects}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{NastarIPMI, ADDRESS = {Flagstaff, Arizona, USA}, AUTHOR = {Chahab Nastar and Nicholas Ayache}, BOOKTITLE = {Proceedings of the 13th International Conference on Information Processing in Medical Imaging (IPMI'93)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Non-Rigid Motion Analysis in Medical Images: a Physically Based Approach}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, deformations, motion tracking}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Subsol93, ADDRESS = {Mulhouse, France}, AUTHOR = {Gérard Subsol and Jean-Philippe Thirion and Nicholas Ayache}, BOOKTITLE = {Quatrièmes Journées ORASIS}, OPTEDITOR = {}, MONTH = {11--14 Octobre}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {GDR-PRC Communication Homme-Machine, Pôle Vision}, PAGES = {174-177}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Reconnaissance de modèles génériques à l'aide d'un réseau spatial de lignes actives. Application au traitement d'images médicales}, OPTVOLUME = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Benayoun&Monga&Gueziec&Ayache:SCAR92, ADDRESS = {Baltimore, Maryland U.S.A.}, AUTHOR = {S. Benayoun and O. Monga and A. Guéziec and N. Ayache}, BOOKTITLE = {Proceedings of the Eleventh Conference on Computer Applications in Radiology (S'CAR92)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Using Surface Curvatures for 3-D Image Registration}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{bertrand92, OPTADDRESS = {}, AUTHOR = {G. Bertrand and G. Malandain}, BOOKTITLE = {2nd European Conference on Computer Vision (ECCV 92)}, OPTEDITOR = {}, MONTH = {May 18--23}, NOTE = {Santa Margherita, Ligure, Italy}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {710--71}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A new topological segmentation of discrete surfaces}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{isaac-na-ps, ADDRESS = {Santa Margherita Ligure, Italy}, AUTHOR = {I. Cohen and N. Ayache and P. Sulger}, BOOKTITLE = {2nd European Conference on Computer Vision (ECCV'92)}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {458--466}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Tracking Points on Deformable Objects Using Curvature Information}, VOLUME = {588}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Cohen_CohenCVPR92, ADDRESS = {Urbana Champaign, Illinois}, AUTHOR = {L.D. Cohen and I. Cohen}, BOOKTITLE = {Proceedings of the conference on Computer Vision and Pattern Recognition}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {592--598}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Finite Element Methods for active contour models and balloons from 2-D to 3-D}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Cohen_Cohen_Ayache:eccv92, ADDRESS = {Santa Margherita Ligure, Italy}, AUTHOR = {I. Cohen and L.D. Cohen and N. Ayache}, BOOKTITLE = {2nd European Conference on Computer Vision (ECCV'92)}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {648--652}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Using Deformable Surface to Segment 3-D images and Infer Differential Structures}, VOLUME = {588}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Gueziec&Ayache:ECCV92, ADDRESS = {Santa Margherita Ligure, Italy}, AUTHOR = {A. Guéziec and N. Ayache}, BOOKTITLE = {Proceedings of the Second European Conference on Computer Vision 1992}, OPTEDITOR = {}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Smoothing and Matching of 3-D Space Curves}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{herlin92, ADDRESS = {Santa Margherita Ligure, Italy}, AUTHOR = {I.L. Herlin and N. Ayache}, BOOKTITLE = {2nd European Conference on Computer Vision (ECCV'92)}, OPTEDITOR = {}, MONTH = {Mai}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Features Extraction and Analysis Methods for Sequences of Ultrasound Images}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{cvpr-herlin-92, ADDRESS = {Champaign, Illinois, U.S.A.}, AUTHOR = {I.L. Herlin and C. Nguyen and Ch. Graffigne}, BOOKTITLE = {Proceedings of the conference on Computer Vision and Pattern Recognition}, OPTEDITOR = {}, MONTH = {15-18 Juin}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A Deformable Region Model using Stochastic Processes applied to Echocardiographic Images}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{icpr-herlin-92, ADDRESS = {The Hague, Holland}, AUTHOR = {I.L. Herlin and C. Nguyen and Ch. Graffigne}, BOOKTITLE = {Proceedings of the International Conference on Pattern Recognition}, OPTEDITOR = {}, MONTH = {August 30--September 3}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Stochastic Segmentation of Ultrasound Images}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{levy92a, ADDRESS = {Urbana Champaign}, AUTHOR = {Lévy Véhel, J. and P. Mignot and J.-P. Berroir}, BOOKTITLE = {IEEE Conference on Vision and Pattern Recognition (CVPR)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Multifractals, Textures, and Image Analysis}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{malandain92, ADDRESS = {The Hague, The Netherlands}, AUTHOR = {G. Malandain and G. Bertrand}, BOOKTITLE = {IAPR 11th International Conference on Pattern Recognition}, OPTEDITOR = {}, MONTH = {August 30 -- September 3}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Fast characterization of 3D simple points}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{malandain-al92c, ADDRESS = {Lisbon, Portugal}, AUTHOR = {G. Malandain and J.-M. Rocchisani}, BOOKTITLE = {European Association of Nuclear Medicine Congress}, OPTEDITOR = {}, MONTH = {August}, NOTE = {Also in European Journal of Nuclear Medicine 19(8):624}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {3D superimposition of CT and SPECT images of the brain by a mechanical based method}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{malandain-al92b, ADDRESS = {Rennes, France}, AUTHOR = {G. Malandain and J.-M. Rocchisani}, BOOKTITLE = {IEEE EMBS satellite symposium on 3D advanced image processing in medicine}, OPTEDITOR = {}, MONTH = {November 2--4}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Registration of 3D medical images using a mechanical based method}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{monga92b, OPTADDRESS = {}, AUTHOR = {O. Monga and S. Benayoun}, BOOKTITLE = {International Conference on Pattern Recognition (ICPR)}, OPTEDITOR = {}, MONTH = {August}, NOTE = {The Hague, Netherland}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Using partial derivatives of 3D image to extract typical surface features}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{monga-benayounVBC, ADDRESS = {Chapel Hill, North Carolina}, AUTHOR = {O. Monga and S. Benayoun}, BOOKTITLE = {VBC'92 Conference}, OPTEDITOR = {}, MONTH = {Juin}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Using partial derivatives of 3D images to extract typical surface features}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{monga-benayoun:CVPR, ADDRESS = {Urbana Champaign}, AUTHOR = {O. Monga and S. Benayoun and O. Faugeras}, BOOKTITLE = {IEEE Conference on Vision and Pattern Recognition (CVPR)}, OPTEDITOR = {}, MONTH = {Juin}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {From partial derivatives of 3D volumic images to ridge lines}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Rocchi_Aissani_Isaac, OPTADDRESS = {}, AUTHOR = {J.-M. Rocchisani and F. Aissani and I. Cohen and J. Bittoun and N. Ayache and Y. Pouliquen}, BOOKTITLE = {Vème Congrés du Groupe de Recherche sur les Applications du Magnétisme en Médecine}, OPTEDITOR = {}, MONTH = {Mai}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Visualisation 3-D de la Géométrie du segment Antérieur de l'oeil in vitro à partir d'images RMN haute résolution}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Rocchi_Isaac_Aissani, ADDRESS = {Paris}, AUTHOR = {J.-M. Rocchisani and I. Cohen and F. Aissani and J. Bittoun and N. Ayache and Y. Pouliquen}, BOOKTITLE = {Conference of the IEEE Engineering in Medicine and Biology Society}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {3D Analysis of the Anterior Segment of Human eye in vitro from High Resolution Magnetic Resonance Imaging}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Thirion92f, ADDRESS = {Paris}, AUTHOR = {J.-Ph. Thirion and A. Gourdon and O. Monga and A. Guéziec and N. Ayache}, BOOKTITLE = {14th Ann. Int. Conf. of the IEEE Engineering in Medecine and Biology Society}, OPTEDITOR = {}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Automatic Registration of 3D Images Using Surface Curvature}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Thirion92g, ADDRESS = {Rennes}, AUTHOR = {J.-Ph. Thirion and A. Gourdon and O. Monga and A. Guéziec and N. Ayache}, BOOKTITLE = {IEEE EMBS satellite symposium on 3D Advanced Image Processing in Medecine}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Fully Automatic Registration of 3D cat-scan images using surface curvature}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{Thirion92e, ADDRESS = {San-Diego}, AUTHOR = {J.-Ph. Thirion and O. Monga and S. Benayoun and A. Guéziec and N. Ayache}, BOOKTITLE = {IEEE Int. Symp. on Optical Applied Science and Engineering}, OPTEDITOR = {}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Automatic Registration of 3D Images Using Surface Curvature}, OPTVOLUME = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette_spie, OPTADDRESS = {}, AUTHOR = {H. Delingette and M. Hébert and K. Ikeuchi}, BOOKTITLE = {Geometric Methods in Computer Vision, SPIE Vol. 1570}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {SPIE}, PAGES = {104--115}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Energy functions for regularization algorithm}, OPTVOLUME = {}, YEAR = {1991}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, regularization}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/spie91.energy.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette_spie_91, ADDRESS = {San Diego}, AUTHOR = {H. Delingette and M. Hébert and K. Ikeuchi}, BOOKTITLE = {Geometric Methods in Computer Vision, SPIE, Vol. 1570}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {467-472}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Shape Representation and Image Segmentation Using Deformable Surfaces}, OPTVOLUME = {}, YEAR = {1991}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/spie91.deformable.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette_cvpr91, ADDRESS = {Maui, Hawai}, AUTHOR = {H. Delingette and M. Hébert and K. Ikeuchi}, BOOKTITLE = {IEEE Computer Vision and Pattern Recognition (CVPR'91)}, OPTEDITOR = {}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {467-472}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Shape Representation and Image Segmentation Using Deformable Surfaces}, OPTVOLUME = {}, YEAR = {1991}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/cvpr91.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette_iros, ADDRESS = {Osaka}, AUTHOR = {H. Delingette and M. Hébert and K. Ikeuchi}, BOOKTITLE = {Int. Robotics Systems (IROS`91)}, OPTEDITOR = {}, MONTH = {November}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Trajectory Generation with Curvature Constraint based on Energy Minimization}, OPTVOLUME = {}, YEAR = {1991}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {conference, robotics}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/iros91.pdf}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{malandain-al91b, ADDRESS = {Wye, Kent, England}, AUTHOR = {G. Malandain and G. Bertrand and N. Ayache}, BOOKTITLE = {XIIth international conference on Information Processing in Medical Imaging (IPMI)}, EDITOR = {A.C.F. Colchester and D.J. Hawkes}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, PAGES = {300--313}, PUBLISHER = {Springer}, SERIES = {LNCS}, TITLE = {Topological classification in digital space}, VOLUME = {511}, YEAR = {1991}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{malandain-al91, ADDRESS = {Lahaina, Maui, Hawaii}, AUTHOR = {G. Malandain and G. Bertrand and N. Ayache}, BOOKTITLE = {Proceedings of the conference on Computer Vision and Pattern Recognition}, OPTEDITOR = {}, MONTH = {June 3--6}, OPTNOTE = {}, OPTNUMBER = {}, ORGANIZATION = {IEEE}, PAGES = {444--449}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {Topological segmentation of discrete surfaces}, OPTVOLUME = {}, YEAR = {1991}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{delingette_soar, OPTADDRESS = {}, AUTHOR = {T. Choi and H. Delingette and M. Hébert and K. Ikeuchi}, BOOKTITLE = {SOAR}, OPTEDITOR = {}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {A perception and Manipulation System for collecting rock samples}, OPTVOLUME = {}, YEAR = {1990}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, recognition}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{monga-al90b, ADDRESS = {Atlantic City, USA}, AUTHOR = {O. Monga and R. Deriche and G. Malandain and J.P. Cocquerez}, BOOKTITLE = {10th International Conference on Pattern Recognition}, OPTEDITOR = {}, MONTH = {June 17--21}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, OPTPUBLISHER = {}, OPTSERIES = {}, TITLE = {3-D edge detection by recursive filtering and edge tracking}, OPTVOLUME = {}, YEAR = {1990}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @INPROCEEDINGS{monga-al90, ADDRESS = {Nice, France}, AUTHOR = {O. Monga and R. Deriche and G. Malandain and J.P. Cocquerez}, BOOKTITLE = {1st European Conference on Computer Vision (ECCV'90)}, OPTEDITOR = {}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, OPTORGANIZATION = {}, OPTPAGES = {}, PUBLISHER = {Springer}, SERIES = {Lecture Notes in Computer Science}, TITLE = {Recursive filtering and edge closing: two primary tools for 3-D edge detection}, VOLUME = {427}, YEAR = {1990}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, OPTPMID = {}, X-INTERNATIONAL-AUDIENCE = {}, OPTX-INVITED-CONFERENCE = {}, X-PAYS = {}, X-PROCEEDINGS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{blanqui:hal-04201298, OPTADDRESS = {}, AUTHOR = {Frédéric Blanqui and Anne Canteaut and Hidde De Jong and Sébastien Imperiale and Nathalie Mitton and Guillaume Pallez and Xavier Pennec and Xavier Rival and Bertrand Thirion}, INSTITUTION = {Inria}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {1-3}, TITLE = {Recommendations on ''Grey-Zone Publishers''}, OPTTYPE = {}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-04201298/file/CE_note-editeurs-douteux-EN.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04201298}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{blanqui:hal-04001505, OPTADDRESS = {}, AUTHOR = {Frédéric Blanqui and Anne Canteaut and de Jong, Hidde and Sébastien Imperiale and Nathalie Mitton and Guillaume Pallez and Xavier Pennec and Xavier Rival and Bertrand Thirion}, INSTITUTION = {Inria}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {1-3}, TITLE = {Recommandations sur les `` éditeurs de la zone grise ''}, OPTTYPE = {}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-04001505/file/CE_note-editeurs-douteux.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04001505}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{silva:hal-01895800, OPTADDRESS = {}, AUTHOR = {Santiago Silva and Boris Gutman and Eduardo Romero and Paul M. Thompson and Andre Altmann and Marco Lorenzi}, INSTITUTION = {Inria & Université Cote d'Azur, CNRS, I3S, Sophia Antipolis, France}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Federated learning in Distributed Medical Databases: Meta-Analysis of Large-Scale Subcortical Brain Data (Supplementary Material)}, TYPE = {Research Report}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01895800v2/file/Paper_ISBI_2019___Santiago__Acknowledgements_.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01895800}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{breuilly:hal-01186222, OPTADDRESS = {}, AUTHOR = {Marine Breuilly and Kaouthar Chatti and Jacques Darcourt and Philippe Franken and Julien Guglielmi and Grégoire Malandain and Thierry Pourcher}, INSTITUTION = {Inria Sophia Antipolis}, MONTH = {August}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {From extraction of physiological features with dynamic $\mu$-SPECT imaging to modelling of iodide biodistribution in stomach}, TYPE = {Research Report}, YEAR = {2015}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01186222v2/file/BREUILLY_RR_201508.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01186222}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{bauer:hal-01076953, OPTADDRESS = {}, AUTHOR = {Martin Bauer and Martins Bruveris and Philipp Harms and Boris Khesin and Stephen Marsland and Peter Michor and Klas Modin and Olaf Müller and Xavier Pennec and Stefan Sommer and François-Xavier Vialard}, INSTITUTION = {Brunel University London ; University of Vienna}, MONTH = {July}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Math in the Cabin - Shape Analysis Workshop in Bad Gastein}, TYPE = {Research Report}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01076953/file/report.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01076953}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{talbot:hal-00918211, OPTADDRESS = {}, AUTHOR = {Hugo Talbot and Federico Spadoni and Maxime Sermesant and Nicholas Ayache and Hervé Delingette}, INSTITUTION = {}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, PAGES = {22}, TITLE = {Deliverable D10.4.2}, TYPE = {Research Report}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00918211/file/euHeart_Deliverable_10-4-2.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00918211}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{euHeart:WP06:2012, OPTADDRESS = {}, AUTHOR = {Martin W. Krueger and Jatin Relan and Zhong Chen and Maxime Sermesant and Nicholas Ayache and Gunnar Seemann and Olaf Dössel and Nick Linton and C. Aldo Rinaldi and Reza Razavi and Kawal Rhode and Hervé Delingette}, INSTITUTION = {European project euHeart}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Evaluation of RFA planning based on biophysical models}, TYPE = {Deliverables D6.3.3}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813830}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{andre:inria-00618057, OPTADDRESS = {}, AUTHOR = {Barbara André and Tom Vercauteren and Buchner, Anna, M. and Wallace, Michael, B. and Nicholas Ayache}, INSTITUTION = {INRIA}, MONTH = {August}, OPTNOTE = {}, NUMBER = {RR-7722}, TITLE = {Learning Semantic and Visual Similarity for Endomicroscopy Video Retrieval}, TYPE = {Rapport de recherche}, YEAR = {2011}, ABSTRACT = {Traditional Content-Based Image Retrieval (CBIR) systems only deliver visual outputs that are not directly interpretable by the physicians. Our objective is to provide a system for endomicroscopy video retrieval which delivers both visual and semantic outputs that are consistent with each other. In a previous study, we developed an adapted bag-of-visual-words method for endomicroscopy retrieval that computes a visual signature for each video. In this study, we first leverage semantic ground-truth data to transform these visual signatures into semantic signatures that reflect how much the presence of each semantic concept is expressed by the visual words describing the videos. Using cross-validation, we demonstrate that our visual-word-based semantic signatures enable a recall performance which is significantly higher than those of several state-of-the-art methods in CBIR. In a second step, we propose to improve retrieval relevance by learning, from a perceived similarity ground truth, an adjusted similarity distance. Our distance learning method allows to improve, with statistical significance, the correlation with the perceived similarity. Our resulting retrieval system is efficient in providing both visual and semantic information that are correlated with each other and clinically interpretable by the endoscopists.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {probe-based Confocal Laser Endomicroscopy (pCLE), Content- Based Image Retrieval (CBIR), Bag-of-Visual-Words (BoW) method, semantic learning, similarity distance learning}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {http://hal.inria.fr/inria-00618057/PDF/RR-7722.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00618057}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{euHeart:WP06:11, OPTADDRESS = {}, AUTHOR = {M. W. Krueger and J. Relan and H. Delingette and W. Schulze and G. Seemann and O. Dössel}, INSTITUTION = {European project euHeart}, MONTH = {January}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Model Personalization for AF and VT simulations}, TYPE = {Deliverables D6.2.2}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813797}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{euHeart:WP06:2011_AF, OPTADDRESS = {}, AUTHOR = {M. W. Krueger and W. Schulze and G. Seemann and O. Dössel and J. Relan and H. Delingette and M. Sermesant and N. Ayache}, INSTITUTION = {European project euHeart}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Planning of Radiofrequency Ablation for patients with Atrial Fibrillation}, TYPE = {Deliverables D6.3.1}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813798}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{euHeart:WP06:2011_Part2, OPTADDRESS = {}, AUTHOR = {J. Relan and H. Delingette and M. Sermesant and N. Ayache and M. W. Krueger and W. Schulze and G. Seemann and O. Dössel}, INSTITUTION = {European project euHeart}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Planning of RadioFrequency Ablation for patients with Ventricular Tachycardia}, TYPE = {Deliverables D6.3.2}, YEAR = {2011}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813803}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{euHeart:WP06:10, OPTADDRESS = {}, AUTHOR = {M. W. Krueger and J. Relan and H. Delingette and M. Sermesant and N. Ayache and G. Seemann and O. Dössel}, INSTITUTION = {European project euHeart}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Computational Models for AF and VT simulation}, TYPE = {Deliverables D6.2.1}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813771}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Health-e-Child:WP11:10, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Curzio Basso and Younes Boudjemline and Stanley Durrleman and Ender Konukoglu and Tommaso Mansi and Kristin McLeod and Giacomo Pongiglione and Matteo Santoro and Maxime Sermesant and Bertrand Stos and Nicolas Toussaint and Gianluca Trocchio}, INSTITUTION = {European project Health-e-Child (IST-2004-027749)}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Third generation disease models: Image analysis tools, pediatric heart diseases, inflammatory diseases and brain tumors}, TYPE = {Deliverables D11.4}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/projects/Health-e-Child/DiseaseModels/}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {IT}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813777}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{DURRLEMAN:RR:09:, OPTADDRESS = {}, AUTHOR = {Stanley Durrleman and Xavier Pennec and Guido Gerig and Alain Trouvé and Nicholas Ayache}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-6952}, PAGES = {17 pages}, TITLE = {Spatiotemporal Atlas Estimation for Developmental Delay Detection in Longitudinal Datasets}, TYPE = {Research report}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {US}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00408293}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Durrleman:ResearchReport:08, OPTADDRESS = {}, AUTHOR = {Stanley Durrleman and Xavier Pennec and Alain Trouvé and Nicholas Ayache}, INSTITUTION = {INRIA}, MONTH = {June}, OPTNOTE = {}, NUMBER = {RR-6571}, TITLE = {Sparse Approximation of Currents for Statistics on Curves and Surfaces}, TYPE = {Research report}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00286014}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Fillard:RR:2007, OPTADDRESS = {}, AUTHOR = {Pierre Fillard and Xavier Pennec and M. Thompson, Paul and Nicholas Ayache}, INSTITUTION = {INRIA}, MONTH = {07}, OPTNOTE = {}, NUMBER = {RR-6241}, TITLE = {Evaluating Brain Anatomical Correlations via Canonical Correlation Analysis of Sulcal Lines}, TYPE = {Research report}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616033}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{gallier:rr:2007, OPTADDRESS = {}, AUTHOR = {Jean Gallier}, INSTITUTION = {INRIA Sophia-Antipolis}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-6379}, TITLE = {Notes on Convex Sets, Polytopes, Polyhedra Combinatorial Topology, Voronoi Diagrams and Delaunay Triangulations}, TYPE = {Research report}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://hal.inria.fr/inria-00193831/en/}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00193831}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Health-e-Child:WP11:07, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Curzio Basso and Younes Boudjemline and Stanley Durrleman and Ender Konukoglu and Tommaso Mansi and Giacomo Pongiglione and Matteo Santoro and Maxime Sermesant and Bertrand Stos and Nicolas Toussaint and Gianluca Trocchio}, INSTITUTION = {European project Health-e-Child (IST-2004-027749)}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {First generation disease models: Image analysis tools, pediatric heart diseases, inflammatory diseases and brain tumors}, TYPE = {Deliverables D11.2}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/projects/hec/}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Arsigny:RRPolyaffine:06, OPTADDRESS = {}, AUTHOR = {Vincent Arsigny and Olivier Commowick and Xavier Pennec and Nicholas Ayache}, INSTITUTION = {INRIA Sophia-Antipolis}, MONTH = {March}, OPTNOTE = {}, NUMBER = {RR-5865}, TITLE = {A Fast and Log-Euclidean Polyaffine Framework for Locally Affine Registration}, TYPE = {Research report}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Polyaffine transformations, Diffeomorphisms, Non-rigid registration, Multi-affine registration, Lie groups, Log-Euclidean metrics, Magnetic Resonance Imaging}, URL = {https://www-sop.inria.fr/asclepios/Publications/Arsigny/arsigny_rr_polyaffine.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-5865.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00070161}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Arsigny:RRBiinvariantMean:06, OPTADDRESS = {}, AUTHOR = {Vincent Arsigny and Xavier Pennec and Nicholas Ayache}, INSTITUTION = {INRIA Sophia-Antipolis}, MONTH = {April}, OPTNOTE = {}, NUMBER = {RR-5885}, TITLE = {Bi-invariant Means in Lie Groups. Application to Left-invariant Polyaffine Transformations}, TYPE = {Research report}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Bi-invariant means, Fréchet means, Statistics, Lie groups, Riemannian geometry, Polyaffine transformations, Diffeomorphisms}, URL = {https://www-sop.inria.fr/asclepios/Publications/Arsigny/arsigny_rr_biinvariant_mean.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00071383/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Fillard:RR:06, OPTADDRESS = {}, AUTHOR = {Pierre Fillard and Vincent Arsigny and Xavier Pennec and Kiralee M. Hayashi and Paul M. Thompson and Nicholas Ayache}, INSTITUTION = {INRIA}, MONTH = {April}, OPTNOTE = {}, NUMBER = {RR-5887}, TITLE = {Measuring Brain Variability by Extrapolating Sparse Tensor Fields Measured on Sulcal Lines}, TYPE = {Research report}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Fillard/Fillard.RR.06.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-5887.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00071381}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Glatard:RRTimeout:06, OPTADDRESS = {}, AUTHOR = {Tristan Glatard and Johan Montagnat and Xavier Pennec}, INSTITUTION = {I3S}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {I3S/RR-2006-35-FR}, TITLE = {Optimizing jobs timeouts on clusters and production grids}, OPTTYPE = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.i3s.unice.fr/~mh/RR/2006/RR-06.35-T.GLATARD.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.archives-ouvertes.fr/hal-00683172}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Glatard:RRMoteur:06, OPTADDRESS = {}, AUTHOR = {Tristan Glatard and Johan Montagnat and Xavier Pennec and David Emsellem and Diane Lingrand}, INSTITUTION = {I3S RAINBOW team, Univ. Nice-Sophia-Antipolis}, MONTH = {March}, OPTNOTE = {}, NUMBER = {I3S/RR-2006-07-FR}, TITLE = {MOTEUR: a data-intensive service-based workflow manager}, OPTTYPE = {}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.i3s.unice.fr/~mh/RR/2006/RR-06.07-T.GLATARMoteurD.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Health-e-Child:A6:06, OPTADDRESS = {}, AUTHOR = {Martin Huber and Xavier Pennec and Alessandro Verri and Harry Dimitropoulos and Maxime Sermesant and Cristian Mircean and Sonja Zilner and Homer Metaxas and Michael Lynch and Ender Konukoglu and Maria-Luisa Garre and Anna Charisi and Curzio Basso and Elise Arnaud}, INSTITUTION = {European project Health-e-Child (IST-2004-027749)}, MONTH = {June}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {State of the art report on disease models, decision support systems and knwoledge discovery for pediatric oncology, cardiology and rheumatology}, TYPE = {Deliverables 11.1, 12.1, 13.1}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Peyrat:RR:06, OPTADDRESS = {}, AUTHOR = {Jean-Marc Peyrat and Maxime Sermesant and Hervé Delingette and Xavier Pennec and Chenyang Xu and Elliot McVeigh and Nicholas Ayache}, INSTITUTION = {INRIA}, MONTH = {May}, OPTNOTE = {}, NUMBER = {RR-5906}, TITLE = {Towards a Statistical Atlas of Cardiac Fiber Architecture}, TYPE = {Research report}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {DT-MRI, DTI, Diffusion Tensor, Log-Euclidean, Cardiac Fiber, Heart, Myocardium, Atlas}, URL = {ftp://ftp.inria.fr/INRIA/publication/publi-pdf/RR/RR-5906.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-5906.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00071359}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Arsigny:RRTensors:05, ADDRESS = {Sophia-Antipolis, France}, AUTHOR = {Vincent Arsigny and Pierre Fillard and Xavier Pennec and Nicholas Ayache}, INSTITUTION = {INRIA}, MONTH = {May}, OPTNOTE = {}, NUMBER = {RR-5584}, TITLE = {Fast and Simple Computations on Tensors with Log-Euclidean Metrics}, TYPE = {Research report}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {DT-MRI, Magnetic Resonance Imaging, Tensors, brain, Riemannian geometry, Lie group, regularization, extrapolation, interpolation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Arsigny/arsigny_rr_tensors.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-5584.html}, POSTSCRIPT = {ftp://ftp.inria.fr/INRIA/publication/publi-ps-gz/RR/RR-5584.ps.gz}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00070423/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{boisvert:navsystem, OPTADDRESS = {}, AUTHOR = {Jonathan Boisvert}, INSTITUTION = {École Polytechnique de Montréal}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Système de navigation 3D pour les chirurgies minimalement invasives du rachis}, TYPE = {Research Report (Candidacy Examination Report)}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Fillard:RREstimation:05, ADDRESS = {Sophia-Antipolis, France}, AUTHOR = {Pierre Fillard and Vincent Arsigny and Xavier Pennec and Nicholas Ayache}, INSTITUTION = {INRIA}, MONTH = {June}, OPTNOTE = {}, NUMBER = {RR-5607}, TITLE = {Joint Estimation and Smoothing of Clinical DT-MRI with a Log-Euclidean Metric}, TYPE = {Research report}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tensors, DT-MRI, DTI, estimation, regularization, fiber tracking, Log-Euclidean, Riemannian geometry}, URL = {http://hal.inria.fr/inria-00070400/document}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-5607.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00070400/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{fouard:RR:2005, OPTADDRESS = {}, AUTHOR = {Céline Fouard and Grégoire Malandain and Steffen Prohaska and Malte Westerhoff}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-5581}, TITLE = {Blockwise processing applied to brain micro-vascular network study}, TYPE = {Research report}, YEAR = {2005}, ABSTRACT = {The study of cerebral micro-vascular network requires high resolution images. However, to obtain statistically relevant results, a large area of the brain (about few square millimeters) has to be investigated. This leads us to consider huge images, too large to be loaded and processed at once in the memory of a standard computer. To consider a large area, a compact representation of the vessels is required. The medial axis seems to be the tools of choice for the aimed application. To extract it, a dedicated skeletonization algorithm is proposed. Indeed, a skeleton must be homotopic, thin and medial with respect to the object it represents. Numerous approaches already exist which focus on computational efficiency. However, they all implicitly assume that the image can be completely processed in the computer memory, which is not realistic with the size of the data considered here. We present in this paper a skeletonization algorithm that processes data locally (in sub-images) while preserving global properties (i.e. homotopy). We then show some results obtained on a mosaic of 3-D images acquired by confocal microscopy.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {image mosaic, digital topology, chamfer map, medial axis, skeleton, topological thinning}, URL = {ftp://ftp.inria.fr/INRIA/publication/publi-pdf/RR/RR-5581.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-5581.html}, POSTSCRIPT = {ftp://ftp.inria.fr/INRIA/publication/publi-ps-gz/RR/RR-5581.ps.gz}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.archives-ouvertes.fr/hal-00308887}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Glatard:RR:2005, OPTADDRESS = {}, AUTHOR = {Tristan Glatard and Johan Montagnat and Xavier Pennec}, INSTITUTION = {Nice-Sophia-Antipolis University, I3S Lab, RAINBOW project}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {I3S/RR-2005-32}, TITLE = {An optimized workflow enactor for data-intensive grid applications}, OPTTYPE = {}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.i3s.unice.fr/~mh/RR/2005/RR-05.32-T.GLATARD.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.archives-ouvertes.fr/hal-00691833}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{malandain:RR:2005, OPTADDRESS = {}, AUTHOR = {Grégoire Malandain and Céline Fouard}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-5566}, TITLE = {On optimal chamfer masks and coefficients}, TYPE = {Research report}, YEAR = {2005}, ABSTRACT = { This report describes the calculation of local errors in Chamfer masks both in two- and in three-dimensional anisotropic spaces. For these errors, closed forms are given that can be related to the Chamfer mask geometry. Thanks to these calculation, it can be obsrved that the usual Chamfer masks ({\em i.e.} 3x3x3 or 5x5x5) have an inhomogeneously distributed error. Moreover, it allows us to design dedicated Chamfer masks by controlling either the complexity of the computation of the distance map (or equivalently the number of vectors in the mask), or the error of the mask in $\mathbb{Z}^2$ or in $\mathbb{Z}^3$. Last, since Chamfer distances are usually computed with integer weights (and approximate the Euclidean distance up to a multiplicative factor), we demonstrate that the knowledge of the local errors allows a very efficient computation of these weights.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Chamfer distance, anisotropic lattice, Farey triangulation}, URL = {ftp://ftp.inria.fr/INRIA/publication/publi-pdf/RR/RR-5566.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-5566.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00070440/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{blondel:rr:2004, OPTADDRESS = {}, AUTHOR = {Christophe Blondel and Grégoire Malandain and Régis Vaillant and Nicholas Ayache}, INSTITUTION = {INRIA}, MONTH = {May}, OPTNOTE = {}, NUMBER = {RR-5214}, TITLE = {Reconstruction of Coronary Arteries from One Rotational X-Ray Projection Sequence}, TYPE = {Research report}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Coronary angiography, Stereovision, Motion Analysis, Tomography}, URL = {ftp://ftp.inria.fr/INRIA/publication/publi-pdf/RR/RR-5214.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-5214.html}, POSTSCRIPT = {ftp://ftp.inria.fr/INRIA/publication/publi-ps-gz/RR/RR-5214.ps.gz}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00077050/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Clatz:RR:2004, OPTADDRESS = {}, AUTHOR = {Olivier Clatz and Pierre-Yves Bondiau and Hervé Delingette and Maxime Sermesant and Simon Warfield and Grégoire Malandain and Nicholas Ayache}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-5187}, TITLE = {Brain Tumor Growth Simulation}, TYPE = {Research report}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tumor, model, glioblastoma, brain, Magnetic Resonance Imaging, growth, model, simulation, finite element, biomechanics, diffusion, infiltration, mass effect, Clinical Target Volume, Gross Tumor Volume}, URL = {ftp://ftp-sop.inria.fr/pub/rapports/RR-5187.pdf}, URL-PUBLISHER = {https://www-sop.inria.fr/rapports/sophia/RR-5187.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00071401/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Linguraru:TR:04, OPTADDRESS = {}, AUTHOR = {M.G. Linguraru and González Ballester, M. A. and E. Bardinet and D. Galanaud and D. Dormont and J.-P. Brandel and N. Ayache}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-5276}, TITLE = {Automated Analysis of Basal Ganglia Intensity Distribution in Multisequence MRI of the Brain - Application to Creutzfeldt-Jakob Disease}, TYPE = {Research Report}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Linguraru/Linguraru_TR_2004.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-5273.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00070723/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Moreau:RR:04, OPTADDRESS = {}, AUTHOR = {V. Moreau-Villéger and H. Delingette and M. Sermesant and O. Faris and E. McVeigh and N. Ayache}, INSTITUTION = {INRIA}, MONTH = {July}, OPTNOTE = {}, NUMBER = {RR-5269}, TITLE = {Global and Local Parameter Estimation of a Model of the Electrical Activity of the Heart}, TYPE = {Research Report}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {heart modeling, electrophysiology, inverse problem, data assimilation, parameter estimation, FitzHugh-Nagumo}, URL = {https://www-sop.inria.fr/asclepios/Publications/Moreau/moreau_RR_2004.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-5269.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00070729/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Pennec:RRStat:04, OPTADDRESS = {}, AUTHOR = {Xavier Pennec}, INSTITUTION = {INRIA}, MONTH = {January}, NOTE = {An extended version will appear in the International Journal of Mathematical Imaging and Vision}, NUMBER = {RR-5093}, TITLE = {Probabilities and Statistics on Riemannian Manifolds: A Geometric approach}, TYPE = {Research report}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {statistics, geometry, Riemannian geometry}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-5093.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00071490/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Pennec:RRTensors:04, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Pierre Fillard and Nicholas Ayache}, INSTITUTION = {INRIA}, MONTH = {July}, NOTE = {Published in International Journal of Computer Vision 65(1), October 2005.}, NUMBER = {RR-5255}, TITLE = {A Riemannian Framework for Tensor Computing}, TYPE = {Research report}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Tensors, regularization, PDE, geometry, Riemannian geometry}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec_RR_Tensors.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-5255.html}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec_RR_Tensors.ps}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00614990}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{reyes:rr:2004, OPTADDRESS = {}, AUTHOR = {Reyes Aguirre, Mauricio and Grégoire Malandain and Jacques Darcourt}, INSTITUTION = {INRIA}, MONTH = {July}, OPTNOTE = {}, NUMBER = {RR-5279}, TITLE = {Respiratory Movement Correction in Emission Tomography}, TYPE = {Research report}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {image reconstruction, respiratory movement, MLEM, nuclear medicine, emission tomography}, URL = {ftp://ftp.inria.fr/INRIA/publication/publi-pdf/RR/RR-5279.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-5279.html}, POSTSCRIPT = {ftp://ftp.inria.fr/INRIA/publication/publi-ps-gz/RR/RR-5279.ps.gz}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00070721/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Sermesant:RRModelisation:04, OPTADDRESS = {}, AUTHOR = {M. Sermesant and H. Delingette and N. Ayache}, INSTITUTION = {INRIA}, MONTH = {November}, NOTE = {Submitted to the IEEE Trans. in Medical Imaging}, NUMBER = {RR-5395}, TITLE = {An Electromechanical Model of the Myocardium for Cardiac Image Analysis and Medical Simulation}, TYPE = {Research Report}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Heart, simulation, physiology, biomechanics}, URL = {ftp://ftp.inria.fr/INRIA/publication/publi-pdf/RR/RR-5395.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-5395.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00070608/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Arsigny:RR:2003, OPTADDRESS = {}, AUTHOR = {Vincent Arsigny and Xavier Pennec and Nicholas Ayache}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-4837}, TITLE = {A novel family of geometrical transformations: Polyrigid transformations. Application to the registration of histological slices}, TYPE = {Research report}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, histology}, URL = {ftp://ftp.inria.fr/INRIA/publication/publi-pdf/RR/RR-4837.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-4837.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00071748/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{bardinet-malandain:rr:2003, OPTADDRESS = {}, AUTHOR = {E. Bardinet and G. Malandain}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-4791}, TITLE = {Fusion of autoradiographies with an MR volume using 2-D and 3-D linear transformations}, TYPE = {Research report}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {autoradiography, histology, MRI, matching, fusion}, URL = {http://www.inria.fr/rrrt/rr-4791.html}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00071795/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{fouard:RR:2003, OPTADDRESS = {}, AUTHOR = {Céline Fouard and Grégoire Malandain}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-4792}, TITLE = {Automatic calculation of chamfer mask coefficients for large masks and anisotropic images}, TYPE = {Research report}, YEAR = {2003}, ABSTRACT = {Chamfer distances are widely used in image analysis, and many ways have been investigated to compute optimal chamfer mask coefficients. Unfortunately, these methods are not systematized: they have to be conducted manually for every mask size or image anisotropy. Since image acquisistion (e.g. medical imaging) can lead to anisotropic discrete grids with unpredictable anisotropy value, automated calculation of chamfer mask coefficients becomes mandatory for efficient distance map computation. This report presentes a systematized calculation of these coefficients based on the automatic construction of chamfer masks of any size associated with a triangulation that allows to derive analytically the relative error with respect to the Euclidean distance, in any 3-D anisotropic lattice and that also allows to compute norm constraints.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {image analysis, chamfer distance, norm constraint, anisotropic lattice, Farey triangulation}, URL = {https://hal.inria.fr/inria-00071794/document}, OPTURL-PUBLISHER = {}, POSTSCRIPT = {ftp://ftp.inria.fr/INRIA/publication/publi-ps-gz/RR/RR-4792.ps.gz}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00071794/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Nicolau:RR:2003, OPTADDRESS = {}, AUTHOR = {Stéphane Nicolau and Xavier Pennec and Luc Soler and Nicholas Ayache}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-4993}, TITLE = {Validation of a New 3D/2D Registration Criterion including Error Prediction. Application to Image Guided Radio-Frequency Ablation of the Liver Tumors}, TYPE = {Research report}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Augmented Reality, 3D/2D Registration, Uncertainty Prediction, Tumors Liver Radio-frequencies Ablation}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-4993.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00071585/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{pitiot:rr:2003, OPTADDRESS = {}, AUTHOR = {Alain Pitiot and Eric Bardinet and P. M. Thompson and G. Malandain}, INSTITUTION = {INRIA}, MONTH = {July}, OPTNOTE = {}, NUMBER = {RR-4866}, TITLE = {Automated Piecewise Affine Registration of Biological Images}, TYPE = {Research report}, YEAR = {2003}, ABSTRACT = {This report tackles the registration of 2D biological images (histological sections or autoradiographs) to 2D images from the same or different modalities (e.g., histology or MRI). The process of acquiring these images typically induces composite transformations that we model as a number of rigid or affine local transformations embedded in an elastic one. We propose a registration approach closely derived from this model. Given a pair of input images, we first compute a dense similarity field between them with a block matching algorithm. A hierarchical clustering algorithm then automatically partitions this field into a number of classes from which we extract independent pairs of sub-images. Our clustering algorithm relies on the Earth mover's distribution metric and is additionally guided by robust least-square estimation of the transformations associated with each cluster. Finally, the pairs of sub-images are, independently, affinely registered and a hybrid affine/non-linear interpolation scheme is used to compose the output registered image. We investigate the behavior of our approach under a variety of conditions, and discuss examples using simulated and real medical images, including MRI, autoradiography, histology and cryosection data. We also detail the reconstruction of a 3-D volume from a series of 2-D histological sections and compare it against a reconstruction obtained with a global rigid approach.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, clustering, histology, MRI}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-4866.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00071717/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Granger:RR:02, OPTADDRESS = {}, AUTHOR = {Sébastien Granger and Xavier Pennec}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-4533}, TITLE = {Statistiques exactes et approchées sur les normales aléatoires}, TYPE = {Research report}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {reconstruction, uncertainty, surface, random normals}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-4533.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072055/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Kornprobst-Peeters:RR:02, OPTADDRESS = {}, AUTHOR = {P. Kornprobst and R. Peeters and T. Vieville and G. Malandain and S. Mierisova and S. Sunaert and O. Faugeras and Van Hecke, P.}, INSTITUTION = {INRIA}, MONTH = {July}, OPTNOTE = {}, NUMBER = {RR-4513}, TITLE = {Superresolution in MRI and its influence in statistical analysis}, TYPE = {Research report}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Superresolution, MRI, anisotropic diffusion, half-quadratic minimization}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-4513.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072075/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Pennec:CNES:02, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Radu Stefanescu and Eric Bardinet}, INSTITUTION = {INRIA}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Rapport d'étude de l'action CNES ``R&T Mise en correspondance''}, OPTTYPE = {}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Cachier:RRI:01, OPTADDRESS = {}, AUTHOR = {P. Cachier and N. Ayache}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-4188}, TITLE = {Regularization in Image Non-Rigid Registration: I. Trade-Off between Smoothness and Similarity}, TYPE = {Research report}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Deformations, registration, matching}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-4188.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072434/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Cachier:RRII:01, OPTADDRESS = {}, AUTHOR = {P. Cachier and N. Ayache}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-4243}, TITLE = {Regularization in Image Non-Rigid Registration: II. Isotropic Energies, Filters, and Splines}, TYPE = {Research report}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Deformations, registration, matching}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-4243.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072344/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Granger:RR:01, OPTADDRESS = {}, AUTHOR = {Sébastien Granger and Xavier Pennec and Alexis Roche}, INSTITUTION = {INRIA}, OPTMONTH = {}, NOTE = {Published in MICCAI'01, Utrecht, Netherlands, LNCS 2208, p.752-761}, NUMBER = {RR-4169}, TITLE = {Rigid Point-Surface Registration using Oriented Points and an EM variant of ICP for Computer Guided Oral Implantology}, TYPE = {Research report}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, odontology, validation, uncertainty, surface}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-4169.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072453/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Malandain:Boissonnat:RR:2001, ADDRESS = {Sophia-Antipolis}, AUTHOR = {Grégoire Malandain and Jean-Daniel Boissonnat}, INSTITUTION = {INRIA}, MONTH = {July}, OPTNOTE = {}, NUMBER = {RR-4233}, TITLE = {Computing the Diameter of a Point Set}, TYPE = {Research report}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {computational geometry}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-4233.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Ourselin:RR:01, OPTADDRESS = {}, AUTHOR = {Sébastien Ourselin and Xavier Pennec and Radu Stefanescu and Grégoire Malandain and Nicholas Ayache}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-4333}, TITLE = {Robust Registration of Multi-Modal Medical Images: Towards Real-Time Clinical Applications}, TYPE = {Research report}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, real time, parallelism, magnetic resonance}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-4333.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Delingette_RR1_2000, OPTADDRESS = {}, AUTHOR = {H. Delingette and J. Montagnat}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-3880}, TITLE = {Topology and Shape Constraints on Parametric Active Contours}, TYPE = {Research report}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tech-report, reconstruction}, URL = {http://hal.inria.fr/inria-00072773/document}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-3880.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072773/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Montagnat_RR2_2000, OPTADDRESS = {}, AUTHOR = {J. Montagnat and H. Delingette}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-4078}, TITLE = {Spatial and Temporal Shape Constrained Deformable Surfaces for 3D and 4D Medical Image Segmentation}, TYPE = {Research report}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tech-report, reconstruction}, URL = {http://hal.inria.fr/inria-00072555/document}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072555/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Montagnat_RR1_2000, OPTADDRESS = {}, AUTHOR = {J. Montagnat and H. Delingette and N. Scapel and N. Ayache}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-3954}, TITLE = {Representation, Shape, Topology and Evolution of Deformable Surfaces. Application to 3D Medical Image Segmentation}, TYPE = {Research report}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tech-report, reconstruction}, URL = {http://hal.inria.fr/inria-00072695/document}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072695/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Pennec.Cachier:Roboscope:NT2:00, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Pascal Cachier}, INSTITUTION = {European project Roboscope}, MONTH = {May}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {NT2: Non-Rigid tracking US/US, second generation (Roboscope MMIT deliverable 26)}, OPTTYPE = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, motion tracking, ultrasound, deformations}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Pennec:Cachier:RR:00, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Pascal Cachier and Nicholas Ayache}, INSTITUTION = {INRIA}, MONTH = {December}, OPTNOTE = {}, NUMBER = {RR-4091}, TITLE = {Tracking Brain Deformations in Time-Sequences of 3D US Images}, TYPE = {Research report}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, motion tracking, ultrasound, deformations}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-4091.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072541/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Pennec.Roche:Roboscope:NM2:00, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Alexis Roche}, INSTITUTION = {European project Roboscope}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {NM2: Non-Rigid matching MR/US second generation (Roboscope MMIT deliverable 25)}, OPTTYPE = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, multimodal, magnetic resonance, ultrasound}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Picinbono2-RR, OPTADDRESS = {}, AUTHOR = {G. Picinbono and H. Delingette and N. Ayache}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-4018}, TITLE = {Improving Realism of a Surgery Simulator : Linear Anisotropic Elasticity, Complex Interactions and Force Extrapolation}, TYPE = {Research report}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tech-report, simulation}, URL = {http://hal.inria.fr/inria-00072623/document}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-4018.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072623/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Picinbono1-RR, OPTADDRESS = {}, AUTHOR = {G. Picinbono and H. Delingette and N. Ayache}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-4028}, TITLE = {Non-Linear Anisotropic Elasticity for Real-Time Surgery Simulation Real-time elastic deformations of soft tissues for surgery simulation}, TYPE = {Research report}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tech-report, simulation}, URL = {http://hal.inria.fr/inria-00072611/document}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-4028.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072611/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Prima00b, OPTADDRESS = {}, AUTHOR = {S. Prima and N. Ayache}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Investigating Different Modelings of the Imaging Process for Maximum Likelihood Estimation of the Bias Field in MR Images}, OPTTYPE = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Roche:RR:00, OPTADDRESS = {}, AUTHOR = {Alexis Roche and Xavier Pennec and Grégoire Malandain and Nicholas Ayache and Sébastien Ourselin}, INSTITUTION = {INRIA}, MONTH = {July}, NOTE = {Published in IEEE TMI 20(10), oct. 2001, p. 25-31}, NUMBER = {RR-3980}, TITLE = {Generalized Correlation Ratio for Rigid Registration of 3D Ultrasound with MR Images}, TYPE = {Research report}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, multimodal, magnetic resonance, ultrasound, correlation ratio}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-3980.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072667/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Cachier:RR:99, OPTADDRESS = {}, AUTHOR = {Pascal Cachier and Xavier Pennec and Nicholas Ayache}, INSTITUTION = {INRIA}, MONTH = {June}, OPTNOTE = {}, NUMBER = {RR-3706}, TITLE = {Fast Non-Rigid Matching by Gradient Descent: Study and Improvements of the Demons Algorithm}, TYPE = {Research report}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, deformations}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-3706.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072962/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{guimond99.2, ADDRESS = {Sophia-Antipolis, France}, AUTHOR = {A. Guimond and J. Meunier and J.-P. Thirion}, INSTITUTION = {INRIA}, MONTH = {July}, OPTNOTE = {}, NUMBER = {RR-3731}, TITLE = {Average Brain Models: A Convergence Study}, TYPE = {Research report}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/RR-3731.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072934/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{guimond-roche-rr-1999, OPTADDRESS = {}, AUTHOR = {Alexandre Guimond and Alexis Roche and Nicholas Ayache and Jean Meunier}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-3796}, TITLE = {Multimodal Brain Warping Using the Demons Algorithm and Adaptative Intensity Corrections}, TYPE = {Research report}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, deformations, multimodal}, URL = {https://www-sop.inria.fr/asclepios/Publications/Roche/tmi01.pdf}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-3796.html}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Roche/tmi01.ps.gz}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072863/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{RR-krissian99, OPTADDRESS = {}, AUTHOR = {K. Krissian and G. Malandain and N. Ayache and R. Vaillant and Y. Trousset}, INSTITUTION = {INRIA}, MONTH = {July}, OPTNOTE = {}, NUMBER = {RR-3736}, TITLE = {Model Based Detection of Tubular Structures in 3D Images}, TYPE = {Research report}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {vessels, multiscale analysis, centerline detection}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rapports/sophia/RR-3736.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072929/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Pennec:Roboscope:AdV:99, OPTADDRESS = {}, AUTHOR = {Xavier Pennec}, INSTITUTION = {European project Roboscope}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {AdV: Adapted viewing tools for the user interface (Roboscope MMIT deliverable 13)}, OPTTYPE = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Pennec:Roboscope:CoR1:99, OPTADDRESS = {}, AUTHOR = {Xavier Pennec}, INSTITUTION = {European project Roboscope}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {CoR1: Co-registration tools for MR/Robot (Roboscope MMIT deliverable 12)}, OPTTYPE = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Pennec:Roboscope:RM1:99, OPTADDRESS = {}, AUTHOR = {Xavier Pennec}, INSTITUTION = {European project Roboscope}, MONTH = {April}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {RM1: Rigid matching tools for MR images (Roboscope MMIT deliverable 11)}, OPTTYPE = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Pennec.Cachier:Roboscope:NT1:99, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Pascal Cachier}, INSTITUTION = {European project Roboscope}, MONTH = {December}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {NT1: Non-Rigid tracking US/US, first generation (Roboscope MMIT deliverable 19)}, OPTTYPE = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Prima99a, OPTADDRESS = {}, AUTHOR = {S. Prima and S. Ourselin and N. Ayache}, INSTITUTION = {INRIA}, MONTH = {December}, OPTNOTE = {}, NUMBER = {RR-3841}, TITLE = {Computation of symmetry planes in 3D medical images}, TYPE = {Research report}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-3841.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Roche-99b, OPTADDRESS = {}, AUTHOR = {A. Roche and G. Malandain and N. Ayache}, INSTITUTION = {INRIA}, MONTH = {July}, OPTNOTE = {}, NUMBER = {RR-3741}, TITLE = {Unifying Maximum Likelihood Approaches in Medical Image Registration}, TYPE = {Research report}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-3741.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072923/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Roche.Pennec:Roboscope:NM1:99, OPTADDRESS = {}, AUTHOR = {Alexis Roche and Xavier Pennec}, INSTITUTION = {European project Roboscope}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {NM1: Non-Rigid matching MR/US first generation (Roboscope MMIT deliverable 18)}, OPTTYPE = {}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{RR-Tabary99, OPTADDRESS = {}, AUTHOR = {Marie-Laure Tabary and Nicholas Ayache and Jacques Darcourt and Grégoire Malandain}, INSTITUTION = {INRIA}, MONTH = {November}, OPTNOTE = {}, NUMBER = {RR-3802}, TITLE = {Analyse statistique d'images médicales : étude et utilisation du logiciel SPM}, TYPE = {Research report}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rapports/sophia/RR-3802.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00072857/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Cotin2-RR, OPTADDRESS = {}, AUTHOR = {S. Cotin and H. Delingette and N. Ayache}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-3510}, TITLE = {Efficient Linear Elastic Models of Soft Tissues for real-time surgery simulation}, TYPE = {Research report}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tech-report, reconstruction}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/RR-3510.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073174/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Cotin1-RR, OPTADDRESS = {}, AUTHOR = {S. Cotin and H. Delingette and N. Ayache}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-3511}, TITLE = {Real-time elastic deformations of soft tissues for surgery simulation}, TYPE = {Research report}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tech-report, simulation}, URL = {http://hal.inria.fr/inria-00073173/document}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073173/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Declerck-98, OPTADDRESS = {}, AUTHOR = {J. Declerck and N. Ayache and E.R. McVeigh}, INSTITUTION = {INRIA}, MONTH = {October}, OPTNOTE = {}, NUMBER = {RR-3535}, TITLE = {Use of a 4D planispheric transformation for the tracking and the analysis of LV motion with tagged MR images}, TYPE = {Research report}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/RR-3535.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073150/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Delingette-RR98, OPTADDRESS = {}, AUTHOR = {H. Delingette}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-3506}, TITLE = {Towards Realistic Soft Tissue Modeling in Medical Simulation}, TYPE = {Research report}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tech-report, reconstruction}, URL = {http://hal.inria.fr/inria-00073178/document}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073178/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{seg:RR-karl, OPTADDRESS = {}, AUTHOR = {K. Krissian and G. Malandain and N. Ayache}, INSTITUTION = {INRIA}, MONTH = {March}, OPTNOTE = {}, NUMBER = {RR-3442}, TITLE = {Model Based Multiscale Detection and Reconstruction of 3D Vessels}, TYPE = {Research report}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/RR-3442.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073248/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Ourselin:RR:98, OPTADDRESS = {}, AUTHOR = {Sébastien Ourselin and Alexis Roche and Gérard Subsol and Xavier Pennec and Christophe Sattonnet}, INSTITUTION = {INRIA}, MONTH = {December}, OPTNOTE = {}, NUMBER = {RR-3595}, TITLE = {Automatic Alignment of Histological Sections for 3D Reconstruction and Analysis}, TYPE = {Research report}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, histology}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-3595.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073084/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Pennec:RR:98, OPTADDRESS = {}, AUTHOR = {Xavier Pennec}, INSTITUTION = {INRIA}, MONTH = {March}, OPTNOTE = {}, NUMBER = {RR-3371}, TITLE = {Computing the mean of geometric features - Application to the mean rotation}, TYPE = {Research report}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {statistics, geometry, uncertainty}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-3371.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073318/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Pennec:AIM-2:98, OPTADDRESS = {}, AUTHOR = {Xavier Pennec}, INSTITUTION = {MIT Artificial Intelligence Lab}, MONTH = {January}, OPTNOTE = {}, NUMBER = {AIM-1623}, TITLE = {Registration of Uncertain Geometric Features: Estimating the Pose and its Accuracy}, OPTTYPE = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, uncertainty, geometry, validation, statistics}, OPTURL = {}, OPTURL-PUBLISHER = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.AIM-1623.ps.gz}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Pennec:AIM-1:98, OPTADDRESS = {}, AUTHOR = {Xavier Pennec}, INSTITUTION = {MIT Artificial Intelligence Lab}, MONTH = {January}, NOTE = {Published in Videre 1(2), 1998, p.58-87}, NUMBER = {AIM-1622}, TITLE = {Toward a generic framework for recognition based on uncertain geometric features}, TYPE = {Memo}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, uncertainty}, OPTURL = {}, OPTURL-PUBLISHER = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec.AIM-1622.ps.gz}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Rey:RR:98, OPTADDRESS = {}, AUTHOR = {D. Rey and G. Subsol and H. Delingette and N. Ayache}, INSTITUTION = {INRIA}, MONTH = {November}, OPTNOTE = {}, NUMBER = {RR-3559}, TITLE = {Automatic detection and segmentation of evolving processes in 3D medical images: application to multiple sclerosis}, TYPE = {Research report}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tech-report, reconstruction, segmentation, automatic detection, evolving processes, vector field analysis, multiple sclerosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073125/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Roche:RR:98, OPTADDRESS = {}, AUTHOR = {Alexis Roche and Grégoire Malandain and Xavier Pennec and Nicholas Ayache}, INSTITUTION = {INRIA}, MONTH = {August}, NOTE = {Published in MICCAI'98, Cambridge, USA, LNCS 1496, p. 1115-1124}, NUMBER = {RR-3378}, TITLE = {Multimodal Image Registration by Maximization of the Correlation Ratio}, TYPE = {Research report}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, multimodal, correlation ratio}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-3378.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073311/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{luc-art:98:2, OPTADDRESS = {}, AUTHOR = {Luc Soler and G. Malandain and H. Delingette}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-3496}, TITLE = {Segmentation automatique des réseaux vasculaires dans les images d'angiographie 3D}, TYPE = {Research report}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tech-report, reconstruction}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rapports/sophia/RR-3496.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073190/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{valente_RR98, OPTADDRESS = {}, AUTHOR = {S. Valente and J.-L. Dugelay and H. Delingette}, INSTITUTION = {Institut Eurecom}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-98-041}, TITLE = {Geometric and Photometric Head Modeling for Facial Analysis Technologies}, OPTTYPE = {}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tech-report, reconstruction}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{delingette_RR1_97, OPTADDRESS = {}, AUTHOR = {H. Delingette}, INSTITUTION = {Inria}, MONTH = {February}, OPTNOTE = {}, NUMBER = {RR-3111}, TITLE = {General Object Reconstruction based on Simplex Meshes}, TYPE = {Research report}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tech-report, reconstruction}, URL = {http://hal.inria.fr/inria-00073579/document}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073579/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{TC97a, OPTADDRESS = {}, AUTHOR = {Jean-Philippe Thirion and G. Calmon}, INSTITUTION = {Inria}, MONTH = {February}, OPTNOTE = {}, NUMBER = {RR-3101}, TITLE = {Deformation Analysis to Detect and Quantify Active Lesions in 3D Medical Images Sequences}, TYPE = {Research report}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/RR-3101.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073590/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Thirion97e, OPTADDRESS = {}, AUTHOR = {J.-P. Thirion and S. Prima and G. Subsol}, INSTITUTION = {Inria}, MONTH = {June}, OPTNOTE = {}, NUMBER = {RR-3178}, TITLE = {Statistical Analysis of Dissymmetry in Volumetric Medical Images}, TYPE = {Research report}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/RR-3178.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{BCA96f, ADDRESS = {Sophia-Antipolis}, AUTHOR = {E. Bardinet and L.D. Cohen and N. Ayache}, INSTITUTION = {INRIA}, MONTH = {February}, OPTNOTE = {}, NUMBER = {RR-2797}, TITLE = {Analyzing the deformation of the left ventricle of the heart with a parametric deformable model}, TYPE = {Research report}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-2797.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073893/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Declerck-96.11, OPTADDRESS = {}, AUTHOR = {J. Declerck and J. Feldmar and N. Ayache}, INSTITUTION = {Inria}, MONTH = {November}, OPTNOTE = {}, NUMBER = {RR-3039}, TITLE = {Definition of a 4D continuous polar transformation for the tracking and the analysis of LV motion}, TYPE = {Research report}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Matching, Heart, SPECT, Splines, Atlas}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/RR-3039.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073654/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Declerck-96.2, OPTADDRESS = {}, AUTHOR = {J. Declerck and J. Feldmar and M.L. Goris and F. Betting}, INSTITUTION = {INRIA}, MONTH = {February}, OPTNOTE = {}, NUMBER = {RR-2770}, TITLE = {Automatic Registration and Alignment on a Template of Cardiac Stress & Rest SPECT Images}, TYPE = {Research report}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073922/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{vidal-al96b, ADDRESS = {2004 route des Lucioles BP 93, 06902 Sophia Antipolis Cedex, France}, AUTHOR = {S. Fernández-Vidal and G. Malandain}, INSTITUTION = {INRIA}, MONTH = {janvier}, NOTE = {published in Image and Vision Computing}, NUMBER = {RR-2771}, TITLE = {Squelettes euclidiens d'objets discrets n-dimensionnels}, TYPE = {Research report}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rapports/sophia/RR-2771.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073922/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{diff-RR-karl, ADDRESS = {2004 route des Lucioles BP 93 06902 Sophia Antipolis Cedex (France)}, AUTHOR = {K. Krissian and G. Malandain and N. Ayache}, INSTITUTION = {Inria Sophia Antipolis}, MONTH = {December}, OPTNOTE = {}, NUMBER = {RR-3064}, TITLE = {Directional Anisotropic Diffusion applied to segmentation of vessels in 3D images}, TYPE = {Research report}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rapports/sophia/RR-3064.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073628/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Pennec:RR:96, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Nicholas Ayache}, INSTITUTION = {INRIA}, MONTH = {March}, NOTE = {Published in J. of Math. Imag. and Vision 9(1), July 1998, p. 49-67}, NUMBER = {RR-2820}, TITLE = {Randomness and Geometric Features in Computer Vision}, TYPE = {Research report}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {geometry, statistics, uncertainty, Riemannian geometry}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-2820.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{bdds, ADDRESS = {2004 route des Lucioles BP 93, 06902 Sophia Antipolis Cedex, France}, AUTHOR = {L. Robert and G. Malandain}, INSTITUTION = {INRIA}, MONTH = {octobre}, OPTNOTE = {}, NUMBER = {RR-3001}, TITLE = {Fast Binary Image Processing Using Binary Decision Diagrams}, TYPE = {Research report}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rapports/sophia/RR-3001.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00073695/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{BCA95b, OPTADDRESS = {}, AUTHOR = {E. Bardinet and L.D. Cohen and N. Ayache}, INSTITUTION = {INRIA}, MONTH = {July}, OPTNOTE = {}, NUMBER = {RR-2617}, TITLE = {A parametric deformable model to fit unstructured 3D data}, TYPE = {Research report}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-2617.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074068/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Declerck-95.1, OPTADDRESS = {}, AUTHOR = {J. Declerck and G. Subsol and J.-P. Thirion and N. Ayache}, INSTITUTION = {INRIA}, MONTH = {February}, OPTNOTE = {}, NUMBER = {RR-2485}, PAGES = {153-162}, TITLE = {Automatic Retrieval of Anatomical Structures in 3D Medical Images}, TYPE = {Research report}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074190/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{malandain-al95a, OPTADDRESS = {}, AUTHOR = {G. Malandain and S. Fernández-Vidal and J.-M. Rocchisani}, INSTITUTION = {INRIA}, MONTH = {January}, OPTNOTE = {}, NUMBER = {RR-2453}, TITLE = {Physically Based Rigid Registration of 3-D Free-Form Objects: Application to Medical Imaging}, TYPE = {Research report}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rapports/sophia/RR-2453.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074222/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Pennec:RR:95, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Jean-Philippe Thirion}, INSTITUTION = {INRIA}, MONTH = {January}, NOTE = {Published in Int. J. of Comp. Vision 25(3), 1997, p. 203-229}, NUMBER = {RR-2470}, TITLE = {Validation of 3D Registration Methods based on Points and Frames}, TYPE = {Research report}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, uncertainty, validation}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-2470.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074205/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Subsol95.1, OPTADDRESS = {}, AUTHOR = {G. Subsol and J.-P. Thirion and N. Ayache}, INSTITUTION = {INRIA}, MONTH = {March}, OPTNOTE = {}, NUMBER = {RR-2586}, TITLE = {A General Scheme for Automatically Building 3D Morphometric Anatomical Atlases: application to a Skull Atlas}, TYPE = {Research report}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, atlas}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074098/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Thirion95a, OPTADDRESS = {}, AUTHOR = {J.-P. Thirion}, INSTITUTION = {INRIA}, MONTH = {May}, OPTNOTE = {}, NUMBER = {RR-2547}, TITLE = {Fast Non-Rigid Matching of 3D Medical Images}, TYPE = {Research report}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, deformations}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00077268/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{delingette_RR1_94, OPTADDRESS = {}, AUTHOR = {H. Delingette}, INSTITUTION = {INRIA}, MONTH = {March}, OPTNOTE = {}, NUMBER = {RR-2214}, TITLE = {Simplex Meshes: a General Representation for 3D Shape Reconstruction}, TYPE = {Research report}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tech-report, reconstruction}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074456/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{delingette_cfs, ADDRESS = {Sophia-Antipolis, France}, AUTHOR = {H. Delingette and G. Subsol and S. Cotin and J. Pignon}, INSTITUTION = {I.N.R.I.A.}, MONTH = {February}, OPTNOTE = {}, NUMBER = {RR-2199}, TITLE = {A Craniofacial Surgery Testbed}, TYPE = {Research report}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tech-report, simulation}, URL = {http://hal.inria.fr/inria-00074472/document}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074472/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Feldmar4-tech, OPTADDRESS = {}, AUTHOR = {J. Feldmar and N. Ayache and F. Betting}, INSTITUTION = {INRIA}, MONTH = {December}, OPTNOTE = {}, NUMBER = {RR-2434}, TITLE = {3D-2D projective registration of free-form curves and surfaces}, TYPE = {Research report}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074241/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{herlin-rr94, OPTADDRESS = {}, AUTHOR = {I. L. Herlin and D. Béréziat and G. Giraudon and C. Nguyen and C. Graffigne}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Comparison of different Markov random fields model for segmenting echocardiographic images}, TYPE = {Research report}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{mongaCVPR94, OPTADDRESS = {}, AUTHOR = {O. Monga and R. Lengagne and R. Deriche}, INSTITUTION = {INRIA}, MONTH = {Juin}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Extraction of the zero-crossing of the curvature derivative in volumic 3D medical images : a multi-scale approach}, TYPE = {Research report}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Pennec:RR:94, OPTADDRESS = {}, AUTHOR = {Xavier Pennec and Nicholas Ayache}, INSTITUTION = {INRIA}, MONTH = {May}, NOTE = {Published in Bioinformatics 14(6), 1998, p. 516-522}, NUMBER = {RR-2274}, TITLE = {An ${{\cal O}}(n^2)$ Algorithm for 3D Substructure Matching of Proteins}, TYPE = {Research report}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, protein structure}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-2274.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074397/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Cohen_Bardinet_Ayache:TR93, OPTADDRESS = {}, AUTHOR = {Laurent D. Cohen and Eric Bardinet and Nicholas Ayache}, INSTITUTION = {INRIA}, MONTH = {February}, OPTNOTE = {}, NUMBER = {RR-1824}, TITLE = {Surface Reconstruction using Active Contour Models}, TYPE = {Research report}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-1824.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/hal-00166971/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{gourdon-al93, OPTADDRESS = {}, AUTHOR = {Alexis Gourdon and Nicholas Ayache}, INSTITUTION = {INRIA}, MONTH = {December}, OPTNOTE = {}, NUMBER = {RR-2145}, TITLE = {Registration of a curve on a surface using differential properties}, TYPE = {Research report}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-2145.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074527/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{malandain93, ADDRESS = {2004 route des Lucioles BP 93, 06902 Sophia Antipolis Cedex, France}, AUTHOR = {Grégoire Malandain}, INSTITUTION = {INRIA}, MONTH = {November}, OPTNOTE = {}, NUMBER = {RR-2098}, TITLE = {On topology in multidimensional discrete spaces}, TYPE = {Research report}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-2098.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074574/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{malandain-al93a, OPTADDRESS = {}, AUTHOR = {G. Malandain and J.-M. Rocchisani}, INSTITUTION = {INRIA}, MONTH = {March}, OPTNOTE = {}, NUMBER = {RR-1890}, TITLE = {Matching of 3-D medical images with a potential based method}, TYPE = {Research report}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rapports/sophia/RR-1890.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074781/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{nastar-tech2, OPTADDRESS = {}, AUTHOR = {Chahab Nastar}, INSTITUTION = {INRIA}, MONTH = {June}, OPTNOTE = {}, NUMBER = {RR-1935}, TITLE = {Analytical Computation of the Free Vibration Modes: Application to Non Rigid Motion Analysis and Animation in 3-D Images}, TYPE = {Research report}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074739/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Pennec:RR:93, OPTADDRESS = {}, AUTHOR = {Xavier Pennec}, INSTITUTION = {INRIA}, MONTH = {November}, OPTNOTE = {}, NUMBER = {RR-2111}, TITLE = {Correctness and Robustness of 3D Rigid Matching with Bounded Sensor Error}, TYPE = {Research report}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, uncertainty}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-2111.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074561/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Thirion93b, OPTADDRESS = {}, AUTHOR = {J.-P. Thirion}, INSTITUTION = {INRIA}, MONTH = {April}, OPTNOTE = {}, NUMBER = {RR-1901}, TITLE = {New Feature Points based on Geometric Invariants for 3D Image Registration}, TYPE = {Research report}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00077266/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Thirion93c, OPTADDRESS = {}, AUTHOR = {J.-P. Thirion and S. Benayoun}, INSTITUTION = {INRIA}, MONTH = {July}, NOTE = {(submitted to IEEE TMI)}, NUMBER = {RR-2003}, TITLE = {Image Surface Extremal Points, new feature points for Image Registration}, TYPE = {Research report}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074669/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Thirion93aa, OPTADDRESS = {}, AUTHOR = {J.-P. Thirion and A. Gourdon}, INSTITUTION = {INRIA}, MONTH = {April}, OPTNOTE = {}, NUMBER = {RR-1881-1}, TITLE = {The 3D Marching Lines Algorithm : new results and proofs : part 1}, TYPE = {Research report}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {https://www-sop.inria.fr/rapports/sophia/RR-1881-1.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074792/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Thirion93ab, OPTADDRESS = {}, AUTHOR = {J.-P. Thirion and A. Gourdon}, INSTITUTION = {INRIA}, MONTH = {April}, OPTNOTE = {}, NUMBER = {RR-1881-2}, TITLE = {The 3D Marching Lines Algorithm : new results and proofs : part 2}, TYPE = {Research report}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {https://www-sop.inria.fr/rapports/sophia/RR-1881-2.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074792/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{bertrand92a, OPTADDRESS = {}, AUTHOR = {G. Bertrand and G. Malandain}, INSTITUTION = {ESIEE}, OPTMONTH = {}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {A New Characterization of three-dimensional Simple Points}, TYPE = {Internal report}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Clergue:RR92, OPTADDRESS = {}, AUTHOR = {E. Clergue}, INSTITUTION = {INRIA}, MONTH = {October}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Modèles Déformables à Partir du Produit Tensoriel de Fonctions Splines}, TYPE = {Rapport de stage}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{inp_rr, OPTADDRESS = {}, AUTHOR = {I. Cohen and N. Ayache and P. Sulger}, INSTITUTION = {INRIA}, MONTH = {February}, OPTNOTE = {}, NUMBER = {RR-1595}, TITLE = {Tracking points on deformables objects}, TYPE = {Research report}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{isaac:laurentHQH, OPTADDRESS = {}, AUTHOR = {Isaac Cohen and Laurent D. Cohen}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-2188}, TITLE = {A Hybrid Hyperquadric Model for 2-D and 3-D Data Fitting}, TYPE = {Research report}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074483/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{simplex_recognition, ADDRESS = {Pittsburgh, PA}, AUTHOR = {Herve Delingette and Martial Hébert and Katsuchi Ikeuchi}, INSTITUTION = {Carnegie-Mellon Univertsity}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {CMU-CS-92-214}, TITLE = {Representation and Recognition of Free-Form Surfaces}, OPTTYPE = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {tech-report, recognition}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Gastambide92, OPTADDRESS = {}, AUTHOR = {I. Gastambide}, INSTITUTION = {INRIA-Université Joseph Fourier de Grenoble}, MONTH = {Septembre}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Calibrage d'images IRM,}, TYPE = {Rapport de stage de DEA de Génie Biologique et Médical}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{AGorre:rap, OPTADDRESS = {}, AUTHOR = {A. Gorre}, INSTITUTION = {INRIA}, MONTH = {Septembre}, NOTE = {Rapport de DEA}, OPTNUMBER = {}, TITLE = {Etude de quelques problèmes liés aux Modèles de Contours Actifs}, OPTTYPE = {}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Gueziec:RR92, OPTADDRESS = {}, AUTHOR = {A. Guéziec}, INSTITUTION = {INRIA}, MONTH = {October}, OPTNOTE = {}, NUMBER = {RR-1782}, TITLE = {Large Deformable Splines, Crest Lines and Matching}, TYPE = {Research report}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00077022/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{levy92c, OPTADDRESS = {}, AUTHOR = {Lévy Véhel, J.}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-1707}, TITLE = {Fractals and Integral Geometry Tools for Textures Deformation Measurement}, TYPE = {Research report}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{levy92b, OPTADDRESS = {}, AUTHOR = {Lévy Véhel, J.}, INSTITUTION = {INRIA}, OPTMONTH = {}, OPTNOTE = {}, NUMBER = {RR-1706}, TITLE = {Textures Analysis using Fractal Probability Functions}, TYPE = {Research report}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{NastarRR92, OPTADDRESS = {}, AUTHOR = {C. Nastar and N. Ayache}, INSTITUTION = {INRIA}, MONTH = {October}, OPTNOTE = {}, NUMBER = {RR-1783}, TITLE = {Fast Segmentation, Tracking, and Analysis of Deformable Objects}, TYPE = {Research report}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00077023/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{PelouState92, OPTADDRESS = {}, AUTHOR = {C. Pelou and A. State}, INSTITUTION = {INRIA-Ecole Centrale de Paris}, MONTH = {Mars}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Calibration en reconstruction tri-dimensionelle}, TYPE = {Rapport de stage}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Pennec:StageX:92, OPTADDRESS = {}, AUTHOR = {Xavier Pennec}, INSTITUTION = {ONERA - DMI/GIA}, OPTMONTH = {}, NOTE = {Also in Rapport de stage d'option, Ecole Polytechnique}, OPTNUMBER = {}, TITLE = {Etude d'améliorations possibles de techniques neuro-mimétiques appliquées à la reconnaissance de caractères manuscrits}, TYPE = {Rapport interne}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Saucliere92, OPTADDRESS = {}, AUTHOR = {V. Sauclières}, INSTITUTION = {INRIA-ESIGELEC}, MONTH = {Juin}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Architecture d'une chaîne de traitement d'images médicales}, TYPE = {Rapport de stage}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Thirion92h, OPTADDRESS = {}, AUTHOR = {J.-Ph. Thirion}, INSTITUTION = {INRIA}, MONTH = {October}, NOTE = {(submitted to IEEE TMI)}, NUMBER = {RR-1787}, TITLE = {The Gradient and Laplacien Filtered Back Projection Operators}, TYPE = {Research report}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00077027/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Thirion92b, OPTADDRESS = {}, AUTHOR = {J.-Ph. Thirion and A. Gourdon}, INSTITUTION = {INRIA}, MONTH = {May}, OPTNOTE = {}, NUMBER = {RR-1672}, TITLE = {The 3D Marching Lines Algorithm and Its Application to Crest Lines Extraction}, TYPE = {Research report}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-1672.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00074885/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{cueto91, OPTADDRESS = {}, AUTHOR = {O. Cueto}, INSTITUTION = {INRIA}, MONTH = {Juin}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Reconstruction d'objets 3D à partir de coupes planes en imagerie médicale}, TYPE = {Rapport de stage}, YEAR = {1991}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Magaud91, OPTADDRESS = {}, AUTHOR = {H. Magaud}, INSTITUTION = {INRIA}, MONTH = {September}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Obtenir des images pour faire de la reconstruction tri-dimensionnelle en Tomographie Géométrique}, TYPE = {Rapport de stage}, YEAR = {1991}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{nastar91, OPTADDRESS = {}, AUTHOR = {C. Nastar}, INSTITUTION = {INRIA}, MONTH = {Juin}, OPTNOTE = {}, OPTNUMBER = {}, TITLE = {Suivi de contours en imagerie médicale}, TYPE = {Rapport de stage de DEA}, YEAR = {1991}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{Thirion91d, OPTADDRESS = {}, AUTHOR = {J.-Ph. Thirion}, INSTITUTION = {INRIA}, MONTH = {June}, OPTNOTE = {}, NUMBER = {RR-1463}, TITLE = {A Geometric Alternative to Computed Tomography}, TYPE = {Research Report}, YEAR = {1991}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00075098/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{malandain-bertrand-ayache-rr-1990, OPTADDRESS = {}, AUTHOR = {Grégoire Malandain and G. Bertrand and Nicholas Ayache}, INSTITUTION = {INRIA}, MONTH = {décembre}, OPTNOTE = {}, NUMBER = {RR-1357}, TITLE = {Segmentation topologique des surfaces discretes}, TYPE = {Research report}, YEAR = {1990}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-1357.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00075202/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @TECHREPORT{monga-deriche-malandain-al-rr-1103, OPTADDRESS = {}, AUTHOR = {Olivier Monga and Rachid Deriche and G. Malandain and J.P. Cocquerez}, INSTITUTION = {INRIA}, MONTH = {October}, OPTNOTE = {}, NUMBER = {RR-1103}, TITLE = {Recursive filtering and edge closing : two primary tools for 3d edge detection}, TYPE = {Research report}, YEAR = {1989}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/rrrt/rr-1103.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/inria-00075456/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{krebs:hal-03198828, ADDRESS = {United States}, AUTHOR = {Julian Krebs and Hiroshi Ashikaga and Tommaso Mansi and Bin Lou and Chih-Ching Wu, Katherine and Henry Halperin}, MONTH = {March}, NOTE = {}, NUMBER = {US20210059612A1}, TITLE = {Risk prediction for sudden cardiac death from image derived cardiac motion and structure features}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03198828}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{krebs:hal-03198820, ADDRESS = {United States}, AUTHOR = {Julian Krebs and Tommaso Mansi and Bin Lou}, MONTH = {February}, NOTE = {}, NUMBER = {US20210057104A1}, TITLE = {Patient specific risk prediction of cardiac events from image-derived cardiac function features}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03198820}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{krebs:hal-02536459, ADDRESS = {United States}, AUTHOR = {Julian Krebs and Tommaso Mansi}, MONTH = {March}, NOTE = {}, NUMBER = {US20200090345A1}, TITLE = {Method and System for Deep Motion Model Learning in Medical Images}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02536459}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{krebs:hal-02977569, ADDRESS = {United States}, AUTHOR = {Julian Krebs and Tommaso Mansi and Hervé Delingette and Nicholas Ayache}, MONTH = {October}, NOTE = {}, NUMBER = {US16834269}, TITLE = {Probabilist Motion Model for Generating Medical Images or Medical Image Sequences}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02977569}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{krebs:hal-02185900, ADDRESS = {United States}, AUTHOR = {Julian Krebs and Hervé Delingette and Nicholas Ayache and Tommaso Mansi and Shun Miao}, MONTH = {July}, NOTE = {}, NUMBER = {US 2019/0205766 A1}, TITLE = {Medical Imaging Diffeomorphic Registration based on Machine Learning}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02185900}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{cochet:hal-01576064, ADDRESS = {France}, AUTHOR = {Hubert Cochet and Pierre Jaïs and Maxime Sermesant}, MONTH = {May}, NOTE = {}, NUMBER = {FR1754107}, TITLE = {Méthode de segmentation d'une image tridimensionnelle pour la génération d'un modèle de paroi du myocarde pour la détection d'au moins une zone de circulation électrique singulière}, YEAR = {2017}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01576064}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{nicolau:hal-01308627, ADDRESS = {United States}, AUTHOR = {Stephane Nicolau and Anant S. 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Machida}, NOTE = {}, NUMBER = {U.S. Patent Application, number 98G33339}, TITLE = {Parallel MR Imaging Using High-Precision Coil Sensitivity Map}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{Roche:Patent:US:03, ADDRESS = {}, AUTHOR = {Alexis Roche and Grégoire Malandain and Nicholas Ayache and Xavier Pennec}, MONTH = {March}, NOTE = {}, NUMBER = {US patent No US 6,539,127 B1, Mars 25, 2003}, TITLE = {Electronic device for automatic registration of images}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{Gonzalez:patent:2002, ADDRESS = {}, AUTHOR = {González Ballester, M. A. and Y. Machida}, MONTH = {January}, NOTE = {}, NUMBER = {International Patent Application, number PCT/JP02/00343}, TITLE = {Parallel MR Imaging Using High-Precision Coil Sensitivity Map}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{Linguraru:Patent:02, ADDRESS = {}, AUTHOR = {M.G. Linguraru and J.M. Brady}, NOTE = {}, NUMBER = {patent filing number GB 0222066.3, EP03760809, WO2004001670}, TITLE = {Improvements in or Related to Image Processing}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{Gonzalez:patent:2001, ADDRESS = {}, AUTHOR = {González Ballester, M. A. and Y. Machida}, MONTH = {January}, NOTE = {}, NUMBER = {Japanese Patent Application, number 2001-12478}, TITLE = {Apparatus, Method and MRI System for Evaluating Coil Sensitivity Distribution (in Japanese)}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{rey:patent:2001, ADDRESS = {}, AUTHOR = {David Rey and Grégoire Malandain and Nicholas Ayache and Jonathan Stoeckel}, NOTE = {}, NUMBER = {FR0113192,FR0115780}, TITLE = {Dispositif de méthode de traitement d'image pour détection de lèsions évolutives}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{Roche:Patent:FR:00, ADDRESS = {}, AUTHOR = {Alexis Roche and Grégoire Malandain and Nicholas Ayache and Xavier Pennec}, MONTH = {September}, NOTE = {}, NUMBER = {French patent No FR 98 09649, Bulletin officiel de la propriété intellectuelle no 00/39 du Sept. 09 2000. European extension No 99401881}, TITLE = {Dispositif électronique de recalage automatique d'images}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{malandain:patent:1998, ADDRESS = {}, AUTHOR = {Grégoire Malandain and Luc Robert}, NOTE = {}, NUMBER = {FR9808087}, TITLE = {Dispositif de traitement de données d'acquisition, notamment de données d'image}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{brevet-cotin, ADDRESS = {}, AUTHOR = {S. Cotin and H. Delingette and N. Ayache}, MONTH = {November}, NOTE = {}, NUMBER = {Brevet français}, TITLE = {Dispositif électronique de traitement de données-image, pour la simulation du comportement dynamique d'un objet}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{brevet-decler, ADDRESS = {}, AUTHOR = {J. Declerck and J. Feldmar and N. Ayache}, MONTH = {December}, NOTE = {}, NUMBER = {Brevet français}, TITLE = {Dispositif électronique de traitement d'images pour la détection de mouvements}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{TC97c, ADDRESS = {}, AUTHOR = {Jean-Philippe Thirion and Guillaume Calmon}, MONTH = {May}, NOTE = {}, NUMBER = {Brevet français, numéro 97 06190}, TITLE = {Dispositif électronique de traitement d'images pour la détection de variations dimensionnelles}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{Thirion96b, ADDRESS = {}, AUTHOR = {J.-P. Thirion and N. Ayache and O. Monga and A. Gourdon}, MONTH = {March}, NOTE = {}, NUMBER = {US Patent, number 5499322}, TITLE = {Device for processing Three-Dimensional Image Information with Extraction of Significant Lines}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{Thirion95b, ADDRESS = {}, AUTHOR = {J.-P. Thirion and N. Ayache}, MONTH = {March}, NOTE = {delivery date: June 6, 1995}, NUMBER = {U.S. patent number 5 421 330}, TITLE = {Method and device for examining a body, particularly for tomography}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{Thirion92d, ADDRESS = {}, AUTHOR = {J.-Ph. Thirion and N. Ayache}, MONTH = {Mars}, NOTE = {}, NUMBER = {Brevet, demande d'extension internationale, numero 92 00252}, TITLE = {Procédé et dispositif d'aide à l'inspection d'un corps, notamment pour la tomographie}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{Thirion92c, ADDRESS = {}, AUTHOR = {J.-Ph. Thirion and N. Ayache and O. Monga and A. Gourdon}, MONTH = {Mars}, NOTE = {En cours d'examen}, NUMBER = {Brevet français, numéro 92 03900}, TITLE = {Dispositif de traitement d'informations d'images tri-dimensionnelles avec extraction de lignes remarquables}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @PATENT{Thirion91e, ADDRESS = {}, AUTHOR = {J.-Ph. Thirion and N. Ayache}, MONTH = {Avril}, NOTE = {}, NUMBER = {Brevet français, numéro 91 05138}, TITLE = {Procédé et dispositif d'aide à l'inspection d'un corps, notamment pour la tomographie}, YEAR = {1991}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @BOOKLET{Pennec:MICCAIWorkshopsProgram:2012, ADDRESS = {Nice}, AUTHOR = {Xavier Pennec}, HOWPUBLISHED = {Printed booklet distributed to 967 participants}, MONTH = {October}, NOTE = {90 pages}, TITLE = {Program of the MICCAI 2012 Workshops, Challenges and Tutorials}, YEAR = {2012}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.miccai2012.org/medias/File/miccai_workshop_BD.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @BOOKLET{Magnenat:2009:3AM, ADDRESS = {Eurographics 2009, Munich}, AUTHOR = {Nadia Magnenat-Thalmann and Jérôme Schmid and Hervé Delingette and Marco Agus and José Antonio Iglesias Guitián}, HOWPUBLISHED = {Eurographics 2009 Course Notes}, MONTH = {August}, OPTNOTE = {}, TITLE = {3D Anatomical Modelling and Simulation Concepts}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/members/Herve.Delingette/Publications/eurographics-Tutorial-2009.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{aeschlimann:hal-04387986, AUTHOR = {Yanis Aeschlimann and Anna Calissano and Abildtrup Hansen, Andreas and Théodore Papadopoulo and Samuel Deslauriers-Gauthier}, MONTH = {January}, NOTE = {working paper or preprint}, TITLE = {Graph matching of structural and functional brain networks}, YEAR = {2024}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Brain connectivity, Structure-Function, Graph matching, Brain Network}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-04387986/file/ISBI_submission_1.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-04387986}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{abildtruphansen:hal-04390750, AUTHOR = {Abildtrup Hansen, Andreas and Yanis Aeschlimann and Samuel Deslauriers-Gauthier and Anna Calissano}, HOWPUBLISHED = {2023 Annual Meeting of the Organization for Human Brain Mapping}, MONTH = {July}, NOTE = {Poster}, TITLE = {Permutation equivariant structure-function mapping}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-04390750/file/OHBM2023_poster.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-04390750}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{aeschlimann:hal-04165209, AUTHOR = {Yanis Aeschlimann and Anna Calissano and Samuel Deslauriers-Gauthier and Théodore Papadopoulo and Andreas Hansen}, HOWPUBLISHED = {Neuromod Yearly Meeting 2023}, MONTH = {June}, NOTE = {Poster}, TITLE = {Preliminary results on the graph matching of structural and functional brain networks}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {brain networks, structural connectivity, functional connectivity, brain atlas, network alignment}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-04165209/file/Neuromod_2023_poster_Yanis_AESCHLIMANN.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04165209}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{calissano:hal-04390489, AUTHOR = {Anna Calissano and Théodore Papadopoulo and Xavier Pennec and Samuel Deslauriers-Gauthier}, HOWPUBLISHED = {OHBM 2023 - Organization for Human Brain Mapping}, MONTH = {July}, NOTE = {Poster}, TITLE = {Graph Matching improves the Similarity of Structural Brain Networks}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Brain network, Network alignment, diffusion MRI}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-04390489/file/BrainMatching.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-04390489}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{akhoj:hal-04156036, AUTHOR = {Morten Akhoj and James Benn and Erlend Grong and Stefan Sommer and Xavier Pennec}, MONTH = {July}, NOTE = {working paper or preprint}, TITLE = {Principal subbundles for dimension reduction}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04156036}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{alali:hal-04308478, AUTHOR = {Safaa Al-Ali and John Chaussard and Sébastien Li-Thiao-Té and Éric Ogier-Denis and Alice Percy-Du-Sert and Xavier Treton and Hatem Zaag}, MONTH = {November}, NOTE = {working paper or preprint}, TITLE = {Detection of ulcerative colitis lesions from weakly annotated colonoscopy videos using bounding boxes}, YEAR = {2023}, OPTABSTRACT = {}, DOI = {10.36227/techrxiv.24566263}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-04308478}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{balelli:hal-04069795, AUTHOR = {Irene Balelli and Aude Sportisse and Francesco Cremonesi and Pierre-Alexandre Mattei and Marco Lorenzi}, OPTMONTH = {}, NOTE = {working paper or preprint}, TITLE = {Fed-MIWAE: Federated Imputation of Incomplete Data via Deep Generative Models}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Missing data, Federated learning, Federated pre-processing, Variational autoencoders, Deep Learning}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-04069795/file/main_MICCAI.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-04069795}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{benn:hal-04360903, AUTHOR = {James Benn and Stephen Marsland}, MONTH = {December}, NOTE = {working paper or preprint}, TITLE = {Towards a BCH Formula on the Diffeomorphism Group with a Right-Invariant Metric}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-04360903/file/Right_Invariance-19.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-04360903}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{buet:hal-04112465, AUTHOR = {Blanche Buet and Xavier Pennec}, OPTMONTH = {}, NOTE = {working paper or preprint}, TITLE = {Flagfolds}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04112465}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{cremonesi:hal-04081557, AUTHOR = {Francesco Cremonesi and Marc Vesin and Sergen Cansiz and Yannick Bouillard and Irene Balelli and Lucia Innocenti and Santiago Silva and Samy-Safwan Ayed and Riccardo Taiello and Laetita Kameni and Richard Vidal and Fanny Orlhac and Christophe Nioche and Nathan Lapel and Bastien Houis and Romain Modzelewski and Olivier Humbert and Melek Önen and Marco Lorenzi}, MONTH = {April}, NOTE = {working paper or preprint}, TITLE = {Fed-BioMed: Open, Transparent and Trusted Federated Learning for Real-world Healthcare Applications}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Machine learning, Biomedical Application, Healthcare, Federated Learning Framework}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-04081557/file/fedbiomed_paper-5.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04081557}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{fraboni:hal-03910848, AUTHOR = {Yann Fraboni and Richard Vidal and Laetitia Kameni and Marco Lorenzi}, MONTH = {January}, NOTE = {working paper or preprint}, TITLE = {Sequential Informed Federated Unlearning: Efficient and Provable Client Unlearning in Federated Optimization}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03910848/file/Sequential_Informed_Federated_Unlearning.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03910848}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{rabenoro:hal-04232479, AUTHOR = {Dimbihery Rabenoro and Xavier Pennec}, MONTH = {October}, NOTE = {working paper or preprint}, TITLE = {The geometry of Riemannian submersions from compact Lie groups. Application to flag manifolds}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-04232479/file/2302.14810-1.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04232479}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{szwagier:hal-04171853, AUTHOR = {Tom Szwagier and Xavier Pennec}, MONTH = {November}, NOTE = {working paper or preprint}, TITLE = {Stratified principal component analysis}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Covariance model, Eigenvalue multiplicity, Flag manifold, Parsimony, Probabilistic principal component analysis, Stratification}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-04171853v2/file/Stratified-PCA.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-04171853}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{thanwerdas:hal-03878729, AUTHOR = {Yann Thanwerdas}, MONTH = {November}, NOTE = {working paper or preprint}, TITLE = {Permutation-invariant log-Euclidean geometries on full-rank correlation matrices}, YEAR = {2023}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {SPD matrices, elliptope, correlation matrices, log-Euclidean metric, permutationinvariant, cor-inversion, off-log metric, log-scaled metric, quotient-affine metric AMS subject classifications.}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03878729v2/file/SIMAX_YT_Log_Euclidean_correlation_v3.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03878729}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{burgosfernandez:hal-03695867, AUTHOR = {Francisco J Burgos-Fernandez and Buntheng Ly and Fernando Dìaz-Doutón and Meritxell Vilaseca and Jaume Pujol and Maxime Sermesant}, HOWPUBLISHED = {ARVO 2022 - Annual meeting of the Association for Research in Vision and Ophthalmology}, MONTH = {May}, NOTE = {Poster}, NUMBER = {7}, PAGES = {1}, TITLE = {Deep learning for eye fundus diagnosis based on multispectral imaging}, VOLUME = {63}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03695867/file/ARVO2022_Abstract_FranciscoJBurgos.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03695867}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{maignant:hal-03909427, AUTHOR = {Elodie Maignant and Xavier Pennec and Alain Trouvé}, HOWPUBLISHED = {Curves and Surfaces 2022}, MONTH = {June}, NOTE = {Poster}, ORGANIZATION = {SMAI-SIGMA}, TITLE = {Looking for invariance in Locally Linear Embedding}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Locally linear embedding}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-03909427/file/Maignant_CS2022.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-03909427}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{benn:hal-03910825, AUTHOR = {James Benn and Anna Calissano and Stephen Marsland and Xavier Pennec}, MONTH = {December}, NOTE = {working paper or preprint}, TITLE = {The Currents Space of Graphs}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03910825/file/Benn_HALTemplate-1.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03910825}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{rabenoro:hal-03842125, AUTHOR = {Dimbihery Rabenoro and Xavier Pennec}, MONTH = {November}, NOTE = {working paper or preprint}, TITLE = {A geometric framework for asymptotic inference of principal subspaces in PCA}, YEAR = {2022}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03842125/file/Geometric_Asymptotic_Inference_Subspace_PCA.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03842125}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{calissano:hal-03518747, AUTHOR = {Anna Calissano and Aasa Feragen and Simone Vantini}, HOWPUBLISHED = {JSM 2021 - Joint Statistical Meeting}, MONTH = {August}, OPTNOTE = {}, TITLE = {Graph-Valued Models for Dimensionality Reduction and Regression}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03518747/file/JSM_Calissano.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03518747}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{antelmi:hal-03114888, AUTHOR = {Luigi Antelmi and Nicholas Ayache and Philippe Robert and Federica Ribaldi and Valentina Garibotto and Giovanni B Frisoni and Marco Lorenzi}, MONTH = {May}, NOTE = {working paper or preprint}, TITLE = {Combining Multi-Task Learning and Multi-Channel Variational Auto-Encoders to Exploit Datasets with Missing Observations -Application to Multi-Modal Neuroimaging Studies in Dementia}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Multi Task Learning, Missing Data, Variational Autoencoders, Multimodal Data Analysis, OPAL-Meso}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03114888v2/file/elsarticle-template-harv.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03114888}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{miolane:hal-03505132, AUTHOR = {Nina Miolane and Matteo Caorsi and Umberto Lupo and Marius Guerard and Nicolas Guigui and Johan Mathe and Yann Cabanes and Wojciech Reise and Thomas Davies and António Leitão and Somesh Mohapatra and Saiteja Utpala and Shailja Shailja and Gabriele Corso and Guoxi Liu and Federico Iuricich and Andrei Manolache and Mihaela Nistor and Matei Bejan and Armand Mihai Nicolicioiu and Bogdan-Alexandru Luchian and Mihai-Sorin Stupariu and Florent Michel and Khanh Dao Duc and Bilal Abdulrahman and Maxim Beketov and Elodie Maignant and Zhiyuan Liu and Marek Cerny and Martin Bauw and Santiago Velasco-Forero and Jesus Angulo and Yanan Long}, MONTH = {December}, NOTE = {working paper or preprint}, TITLE = {ICLR 2021 Challenge for Computational Geometry & Topology: Design and Results}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03505132}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{nir:hal-03063822, AUTHOR = {Talia Nir and Jean-Paul Fouche and Jintanat Ananworanich and Beau Ances and Jasmina Boban and Bruce Brew and Linda Chang and Joga Chaganti and Christopher R.K. Ching and Lucette Cysique and Thomas Ernst and Joshua Faskowitz and Vikash Gupta and Jaroslaw Harezlak and Jodi Heaps-Woodruff and Charles Hinkin and Jacqueline Hoare and John Joska and Kalpana Kallianpur and Taylor Kuhn and Hei Lam and Meng Law and Christine Lebrun-Frenay and Andrew Levine and Lydiane Mondot and Beau Nakamoto and Bradford Navia and Xavier Pennec and Eric Porges and Cecilia Shikuma and April Thames and Victor Valcour and Matteo Vassallo and Adam Woods and Paul Thompson and Ronald Cohen and Robert Paul and Dan Stein and Neda Jahanshad}, MONTH = {January}, NOTE = {working paper or preprint}, TITLE = {Smaller limbic structures are associated with greater immunosuppression in over 1000 HIV-infected adults across five continents: Findings from the ENIGMA-HIV Working Group}, YEAR = {2021}, OPTABSTRACT = {}, DOI = {10.1101/724583}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03063822/file/724583v1.full.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03063822}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{wang:hal-03202230, AUTHOR = {Zihao Wang and Hervé Delingette}, MONTH = {May}, NOTE = {working paper or preprint}, TITLE = {Attention for Image Registration (AiR): an unsupervised Transformer approach}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Transformer, Images Registration, Deep Learning}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03202230v3/file/DRAFT__Attention_for_Image_Registration__A_Transformer%20%283%29.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03202230}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{wang:hal-03024748, AUTHOR = {Zihao Wang and Hervé Delingette}, MONTH = {June}, NOTE = {working paper or preprint}, TITLE = {Quasi-Symplectic Langevin Variational Autoencoder}, YEAR = {2021}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03024748v4/file/V2_Langevin_VAE_Revision__Copy_.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03024748}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{wang:hal-03022865, AUTHOR = {Zihao Wang and Zhifei Xu and Jiayi He and Hervé Delingette and Jun Fan}, MONTH = {November}, NOTE = {working paper or preprint}, TITLE = {Long Short-Term Memory Neural Equalizer}, YEAR = {2020}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {decision feedback equalizer, neuromorphic computing, deep learning, LSTM}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-03022865/file/Neuron_Equalizer__Copy_%20%282%29.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-03022865}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{manera:hal-02174565, AUTHOR = {Valeria Manera and Luigi Antelmi and Radia Zeghari and Nicholas Ayache and Marco Lorenzi and Philippe Robert}, HOWPUBLISHED = {AAIC 2019 - Alzheimer's Association International Conference}, MONTH = {July}, NOTE = {Poster}, TITLE = {Prevalence of lack of interest and anhedonia in the general population of the UK Biobank}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02174565/file/UKB-V2.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02174565}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{zeghari:hal-02339152, AUTHOR = {Radia Zeghari and Philippe Robert and Valeria Manera and Marco Lorenzi and Alexandra König}, HOWPUBLISHED = {AAIC 2019 - Alzheimer's Association International Conference}, MONTH = {July}, NOTE = {Poster}, NUMBER = {7}, PAGES = {569}, TITLE = {Towards a Multidimensional Assessment of Apathy in Neurocognitive Disorders}, VOLUME = {15}, YEAR = {2019}, OPTABSTRACT = {}, DOI = {10.1016/j.jalz.2019.06.4514}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02339152}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{miolane:hal-01974572, AUTHOR = {Nina Miolane and Johan Mathe and Claire Donnat and Mikael Jorda and Xavier Pennec}, MONTH = {January}, NOTE = {Preprint NIPS2018}, TITLE = {geomstats: a Python Package for Riemannian Geometry in Machine Learning}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01974572}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{pennec:hal-02157952, AUTHOR = {Xavier Pennec}, MONTH = {June}, NOTE = {working paper or preprint}, TITLE = {Curvature effects on the empirical mean in Riemannian and affine Manifolds: a non-asymptotic high concentration expansion in the small-sample regime}, YEAR = {2019}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {empirical mean, affine connection manifold, Fréchet means, Riemannian manifold, curvature, non-asymptotic estimation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-02157952/file/CurvatureAndEmpiricalFrechetMean.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-02157952}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{abinader:hal-01826517, AUTHOR = {Abi Nader, Clement and Nicholas Ayache and Valeria Manera and Philippe Robert and Marco Lorenzi}, HOWPUBLISHED = {12ème Conférence Francophone d'Epidémiologie Clinique (EPICLIN) et 25èmes Journées des statisticiens des Centre de Lutte Contre le Cancer (CLCC)}, MONTH = {May}, NOTE = {Poster}, NUMBER = {66}, PAGES = {S159}, TITLE = {Disentangling spatio-temporal patterns of brain changes in large-scale brain imaging databases through Independent Gaussian Process Analysis}, VOLUME = {Revue d'Épidémiologie et de Santé Publique}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1016/j.respe.2018.03.108}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Gaussian Process, Statistical Learning}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01826517/file/Epiclin_2018.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01826517}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{antelmi:hal-01844733, AUTHOR = {Luigi Antelmi and Nicholas Ayache and Philippe Robert and Marco Lorenzi}, OPTHOWPUBLISHED = {}, MONTH = {July}, NOTE = {Supplementary Material of the paper: ''Multi-Channel Stochastic Variational Inference for the Joint Analysis of Heterogeneous Biomedical Data in Alzheimer's Disease''. Paper accepted at the 1st International Workshop on Machine Learning in Clinical Neuroimaging, in conjunction with MICCAI 2018, September 20, Granada (Spain)}, TITLE = {Supplementary Material of the paper: ''Multi-Channel Stochastic Variational Inference for the Joint Analysis of Heterogeneous Biomedical Data in Alzheimer's Disease''}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01844733}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{antelmi:hal-01827389, AUTHOR = {Luigi Antelmi and Marco Lorenzi and Valeria Manera and Philippe Robert and Nicholas Ayache}, HOWPUBLISHED = {EPICLIN 2018 - 12ème Conférence Francophone d'Epidémiologie Clinique / CLCC 2018 - 25èmes Journées des statisticiens des Centre de Lutte Contre le Cancer}, MONTH = {May}, NOTE = {Poster}, NUMBER = {3}, PAGES = {S180}, PUBLISHER = {Elsevier}, SERIES = {12e Conférence francophone d'Épidémiologie clinique 25e Journée des statisticiens des Centres de lutte contre le cancer}, TITLE = {A method for statistical learning in large databases of heterogeneous imaging, cognitive and behavioral data.}, VOLUME = {66}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1016/j.respe.2018.03.306}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {CCA, Statistical learning}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01827389/file/epiclin_2018_abstract_antelmi%20%281%29.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01827389}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{lorenzi:hal-02568454, AUTHOR = {Marco Lorenzi and Hélène Barelli}, HOWPUBLISHED = {Alzheimer's Association International Conference (AAIC)}, OPTMONTH = {}, NOTE = {Poster}, TITLE = {Blood Levels of Omega 3 and 6 across the Progression of Alzheimer's Disease}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-02568454/file/AAIC2018-abstract.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-02568454}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{nader:hal-01849180, AUTHOR = {Clement Abi Nader and Nicholas Ayache and Philippe Robert and Marco Lorenzi}, OPTHOWPUBLISHED = {}, MONTH = {July}, NOTE = {Appendix}, TITLE = {Appendix Alzheimer's Disease Modelling and Staging through Independent Gaussian Process Analysis of Spatio-Temporal Brain Changes}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01849180/file/appendix.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01849180}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{cury:hal-01856906, AUTHOR = {Claire Cury and Stanley Durrleman and David M. Cash and Marco Lorenzi and Jennifer M Nicholas and Martina Bocchetta and van Swieten, John Cornelis and Barbara Borroni and Daniela Galimberti and Mario Masellis and Maria Carmela Tartaglia and James Rowe and Caroline Graff and Fabrizio Tagliavini and Giovanni B. Frisoni and Robert Laforce and Elizabeth Finger and de Mendonça, Alexandre and Sandro Sorbi and Sébastien Ourselin and Jonathan D Rohrer and Marc M Modat}, MONTH = {August}, NOTE = {working paper or preprint}, TITLE = {Spatiotemporal analysis for detection of pre-symptomatic shape changes in neurodegenerative diseases: applied to GENFI study}, YEAR = {2018}, OPTABSTRACT = {}, DOI = {10.1101/385427}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {LDDMM, Frontotemporal Dementia, Shape Analysis, Genfi, Thalamus, Spatio temporal analysis, Morphometry}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01856906}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{pennec:hal-01799888, AUTHOR = {Xavier Pennec}, MONTH = {May}, NOTE = {working paper or preprint}, TITLE = {Parallel Transport with Pole Ladder: a Third Order Scheme in Affine Connection Spaces which is Exact in Affine Symmetric Spaces}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {parallel transport, pole ladder, symmetric space, numerical approximation, affine connection space}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01799888/file/PoleLadderInSymmetricSpaces.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01799888}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{zheng:hal-01755317, AUTHOR = {Qiao Zheng and Hervé Delingette and Nicolas Duchateau and Nicholas Ayache}, MONTH = {March}, NOTE = {working paper or preprint}, TITLE = {3D Consistent Biventricular Myocardial Segmentation Using Deep Learning for Mesh Generation}, YEAR = {2018}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {spatial consistency, convolutional neu- ral network, deep learning, myocardial segmentation, propagation}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01755317/file/miccai2017paper1_version2.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01755317}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{guignard:hal-01919187, AUTHOR = {Léo Guignard and Ulla-Maj Fiuza and Bruno Leggio and Emmanuel Faure and Julien Laussu and Lars Hufnagel and Grégoire Malandain and Christophe Godin and Patrick Lemaire}, OPTHOWPUBLISHED = {}, MONTH = {December}, NOTE = {bioRxiv preprint first posted online Dec. 24, 2017; doi: http://dx.doi.org/10.1101/238741. The copyright holder for this preprint (which was not peer-reviewed) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.}, TITLE = {Contact-dependent cell communications drive morphological invariance during ascidian embryogenesis}, YEAR = {2017}, OPTABSTRACT = {}, DOI = {10.1101/238741}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://hal.archives-ouvertes.fr/hal-01919187}, OPTURL-PUBLISHER = {}, PDF = {https://hal.archives-ouvertes.fr/hal-01919187/file/238741.full-3.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{ayache:hal-01325407, AUTHOR = {Nicholas Ayache}, OPTHOWPUBLISHED = {}, MONTH = {April}, NOTE = {Article publié par l'Académie des Sciences dans l'Humanité}, TITLE = {Le patient numérique personnalisé : une révolution}, YEAR = {2016}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01325407/file/LHUMANITE_avril2016%281%29.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01325407}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{miolane:hal-01396716, AUTHOR = {Nina Miolane and Xavier Pennec and Susan Holmes}, HOWPUBLISHED = {International Society of Bayesian Analysis: World Meeting}, MONTH = {June}, NOTE = {Poster}, TITLE = {Towards a unified bayesian geometric framework for template estimation in Computational Anatomy}, YEAR = {2016}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {template, shape, manifold, estimation, medical imaging}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://hal.science/hal-01396716/file/MiolanePosterISBAv2.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.science/hal-01396716}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{bruse:hal-01205176, AUTHOR = {Jan L. Bruse and Kristin Mcleod and Giovanni Biglino and Tain-Yen Hsia and Xavier Pennec and Maxime Sermesant and M. Taylor, Andrew and Silvia Schievano}, HOWPUBLISHED = {7th World Congress of Biomechanics, Boston 2014}, MONTH = {July}, NOTE = {Poster}, TITLE = {A Statistical Shape Atlas of the Surgically Reconstructed Aortic Arch in Patients With Hypoplastic Left Heart Syndrome}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01205176}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{lefolgoc:hal-01002861, AUTHOR = {Le Folgoc, Loic and Hervé Delingette and Antonio Criminisi and Nicholas Ayache}, HOWPUBLISHED = {MICCAI - 17th International Conference on Medical Image Computing and Computer Assisted Intervention}, MONTH = {September}, NOTE = {Technical appendix to a MICCAI 2014 conference paper. Loïc Le Folgoc, Hervé Delingette, Antonio Criminisi, and Nicholas Ayache: Sparse Bayesian Registration}, TITLE = {Technical Appendix on Sparse Bayesian Regression}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Sparse, Bayesian, Regression, RVM}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01002861/file/appendix.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01002861}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{sportes:hal-01310072, AUTHOR = {Adrien Sportes and Anant Vemuri and Stéphane Nicolau and Jerome Huppertz and Luc Soler and Michel Delvaux}, HOWPUBLISHED = {United European Gastroenterology (UEG) Week}, OPTMONTH = {}, NOTE = {Poster}, TITLE = {Development Of A Prototype Of Video Synchronisation For Relocalization Of Biopsy Sites During Endoscopic Evaluation Of Barrett's Oesophagus: Preliminary Experimental And Clinical Study}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Barrett Oesophagus, Gastroscopy, Relocalization}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01310072/file/UEGWeek%202014%20E-posterM2.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01310072}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{sportes:hal-01308609, AUTHOR = {A Sportes and Anant S. Vemuri and Stéphane Nicolau and J Huppertz and L Soler and M Delvaux}, HOWPUBLISHED = {Société Nationale Française de Gastro-Entérologie}, OPTMONTH = {}, NOTE = {Poster}, TITLE = {Développement d'un système de relocalisation endoscopique de sites de biopsie dans le suivi de l'endobrachyoesophage : Résultats préliminaires d'un prototype de synchronisation video}, YEAR = {2014}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Electromagnetic tracking, Surgical navigation, Gastrointestinal endoscopy}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01308609/file/POSTER-Snfge2014.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01308609}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{vandersteen:hal-01108877, AUTHOR = {Clair Vandersteen and Thomas Demarcy and Hervé Delingette and Charles Raffaelli and Jonathan Laudanski and Thierry Pourcher and Jacques Darcourt and Philippe Franken and Dan Gnansia and Nicholas Ayache and Nicolas Guevara}, HOWPUBLISHED = {8th International Symposium on Objective Measures in Auditory Implants}, MONTH = {October}, NOTE = {Poster}, TITLE = {Teaching tool for advanced visualization of temporal bone structures by fusion of $\mu$CT and CT scan images}, YEAR = {2014}, OPTABSTRACT = {}, DOI = {10.13140/2.1.1517.6007}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-01108877/file/OMAI2014_Demarcy.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-01108877}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{miolane:hal-00938320, OPTADDRESS = {}, AUTHOR = {Nina Miolane}, MONTH = {September}, OPTNOTE = {}, SCHOOL = {Imperial College London}, TITLE = {Defining a mean on Lie group}, OPTTYPE = {}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Lie group}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00938320/file/MiolaneMasterThesis.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00938320}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{delingette:hal-00848523, AUTHOR = {Hervé Delingette and Polina Golland and Kensaku Mori}, OPTHOWPUBLISHED = {}, OPTMONTH = {}, NOTE = {Editorial of the Medical Image Analysis journal 17 (2013) 711}, PAGES = {711}, PUBLISHER = {Elsevier}, TITLE = {Editorial for the MEDIA special issue on MICCAI 2012}, VOLUME = {17}, YEAR = {2013}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, PDF = {https://inria.hal.science/hal-00848523/file/Editorial_for_the_MEDIA_Special_Issue_on_MICCAI_2012-final.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://inria.hal.science/hal-00848523}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Andre:DDW:2012:1, AUTHOR = {Barbara André and Tom Vercauteren and Anna M. 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L. Dryden and Xavier Pennec and Jean-Marc Peyrat}, HOWPUBLISHED = {ArXiv e-prints}, MONTH = {September}, OPTNOTE = {}, TITLE = {Power Euclidean metrics for covariance matrices with application to diffusion tensor imaging}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://arxiv.org/abs/1009.3045}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {US}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813769}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Lorenzi:CTAD:10, AUTHOR = {Marco Lorenzi and Michael Donohue and Donata Paternico and Cristina Scarpazza and Susanne Ostrowitzki and Olivier Blin and Elaine Irving and G. Frisoni}, HOWPUBLISHED = {Clinical Trials on Alzheimer's Disease International Conference}, MONTH = {November}, OPTNOTE = {}, TITLE = {Enrichment through biomarkers in clinical trials of Alzheimer's drugs in patients with mild cognitive impairment}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813773}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Lorenzi:VPH:2010, AUTHOR = {Marco Lorenzi and G. Frisoni and Nicholas Ayache and Xavier Pennec}, HOWPUBLISHED = {First VPH Conference (VPH2010), Brussels)}, MONTH = {September}, OPTNOTE = {}, TITLE = {Mapping longitudinal changes in the brain affected by Alzheimer's disease}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Marco.Lorenzi/Lorenzi_VPH10_Poster.pdf}, OPTURL-PUBLISHER = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813774}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{McLeod:VPH:2010, AUTHOR = {Kristin McLeod and Tommaso Mansi and Stanley Durrleman and Maxime Sermesant and Xavier Pennec}, HOWPUBLISHED = {First VPH Conference (VPH2010), Brussels)}, MONTH = {September}, NOTE = {Abstract}, TITLE = {Statistical Analysis of the Anatomy: From Digital Patient to Digital Population}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Kristin.McLeod/McLeod_VPH10_Poster.pdf}, OPTURL-PUBLISHER = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813775}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Ramus:estro:2010, AUTHOR = {Liliane Ramus and Souha Aouadi and Yoann Pointreau and Guillaume Bera and Yungan Tao and Anne Beaudré and Vincent Grégoire and Grégoire Malandain}, HOWPUBLISHED = {Acts of the 29th European Society for Therapeutic Radiology and Oncology (ESTRO)}, OPTMONTH = {}, OPTNOTE = {}, PAGES = {S-513}, TITLE = {Design and use of patient-specific atlases for radiotherapy planning of the head and neck region}, VOLUME = {96}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Liliane.Ramus/estro10_lramus.pdf}, OPTURL-PUBLISHER = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {BE}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813778}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Relan:VPH:2010, AUTHOR = {Jatin Relan and Maxime Sermesant and Phani Chinchapatnam and Hervé Delingette and Kawal Rhode and Reza Razavi and Nicholas Ayache}, HOWPUBLISHED = {First VPH Conference (VPH2010), Brussels)}, MONTH = {September}, OPTNOTE = {}, TITLE = {Personalisation of a 3D Macroscopic Cardiac Electrophysiology Model for Simulation of Induced Ischemic Ventricular Tachycardia}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jatin.Relan/relan_VPH_abstract_2010.pdf}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {GB}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813779}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Seiler:TERMIS:2010, AUTHOR = {Christof Seiler and A. Gazdhar and T. Geiser and Mauricio Reyes and B. Gantenbein-Ritter}, HOWPUBLISHED = {TERMIS, Galway, Ireland}, MONTH = {June}, NOTE = {Abstract}, TITLE = {Mesenchymal Stem Cell Classification During Differentiation Based on Shape Information}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Thariat:sfro:2010, AUTHOR = {Juliette Thariat and Liliane Ramus and Philippe Maingon and Vincent Grégoire and Vincent Darcourt and Serge Marcie and Grégoire Malandain}, HOWPUBLISHED = {21e Congrès de la Société Française de Radiothérapie Oncologique (SFRO)}, OPTMONTH = {}, OPTNOTE = {}, TITLE = {Atlas de contourage automatique des dents pour l'optimisation des soins dentaires}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Liliane.Ramus/sfro10_jthariat.pdf}, OPTURL-PUBLISHER = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {no}, X-PAYS = {BE}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813781}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Thariat:astro:2010, AUTHOR = {Juliette Thariat and Liliane Ramus and Philippe Maingon and Vincent Grégoire and Serge Marcie and Grégoire Malandain}, HOWPUBLISHED = {52nd Annual Meeting of the American Society for Therapeutic Radiology and Oncology (ASTRO)}, OPTMONTH = {}, OPTNOTE = {}, TITLE = {Construction of a dental atlas for automatic teeth segmentation to improve post-irradiation dental care management}, YEAR = {2010}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Liliane.Ramus/astro10_jthariat.pdf}, OPTURL-PUBLISHER = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {BE}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813782}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Andre:icvss:09, AUTHOR = {Barbara André and Tom Vercauteren and Aymeric Perchant and Michael B. Wallace and Anna M. Buchner and Nicholas Ayache}, HOWPUBLISHED = {Pesented as a poster at the third edition of the International Computer Vision Summer School 2009 (ICVSS'09)}, MONTH = {July}, OPTNOTE = {}, TITLE = {Endomicroscopic image retrieval and classification using invariant visual features}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Barbara.Andre/Andre_ICVSS09_Poster.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {US}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00616140}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Dru:IJ:09, AUTHOR = {Florence Dru and Tom Vercauteren}, HOWPUBLISHED = {Insight Journal -- 2009 January - June}, MONTH = {May}, OPTNOTE = {}, TITLE = {An ITK Implementation of the Symmetric Log-Domain Diffeomorphic Demons Algorithm}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://hdl.handle.net/10380/3060}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813744}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Mansi:SFP:09, AUTHOR = {Tommaso Mansi and Barbara André and Maxime Sermesant and Hervé Delingette and Nicholas Ayache and Younes Boudjemline}, HOWPUBLISHED = {Archives de Pédiatrie - Congrès des Sociétés Françaises Médico-chirurgicales Pédiatriques}, MONTH = {June}, OPTNOTE = {}, TITLE = {Simulation personnalisée de replacements valvulaires pulmonaires grâce à l'utilisation d'un modèle mathématique du coeur}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {no}, X-INVITED-CONFERENCE = {no}, X-PAYS = {}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Relan:CP:2009, AUTHOR = {J. Relan and M. Sermesant and and H. Delingette and M. Pop and M. Sorine and G.A. Wright and N. Ayache}, HOWPUBLISHED = {The Cardiac Physiome: Multi-scale and Multi-physics Mathematical Modelling Applied to the Heart, Cambridge, UK}, MONTH = {July}, OPTNOTE = {}, TITLE = {Personalisation of 3D Cardiac Electrophysiology Models for valid Predictions: A Step Towards Patient-Specific Ventricular Tachycardia Modelling}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {GB}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813745}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Seiler:CAOS:2010, AUTHOR = {Christof Seiler and S. Weber and W. Schmidt and F. Fischer and N. Reimers and Mauricio Reyes}, HOWPUBLISHED = {CAOS, Boston, USA}, MONTH = {June}, NOTE = {Abstract}, TITLE = {Automatic Landmark Propagation for Left and Right Symmetry Assessment of Tibia and Femur: A Computational Anatomy Based Approach}, YEAR = {2009}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {yes}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00813747}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{hebert:master:2008, OPTADDRESS = {}, AUTHOR = {François Hebert}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {Master IGMMV, Université de Nice Sophia-Antipolis}, TITLE = {Segmentation de l'intestin grêle dans le cadre de la maladie de Crohn}, TYPE = {Master's Thesis}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{pernod:stage:2008, OPTADDRESS = {}, AUTHOR = {Erik Pernod}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {Institut des Sciences de l'Ingénieur de Toulon et du Var}, TITLE = {Interface Development for Medical Imaging Applications in the framework of the Multiple Sclerosis Disease}, TYPE = {Rapport de fin d'études}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Brun:OHBM:08, ADDRESS = {Melbourne, Australia}, AUTHOR = {C Brun and N Leporé and X Pennec and YY Chou and AD Lee and M Barysheva and K McMahon and de Zubicaray, GI and M Wright and AW Toga and PM Thompson}, HOWPUBLISHED = {13th Annual Meeting of the Organization for Human Brain Mapping (OHBM), June 15-19}, OPTMONTH = {}, OPTNOTE = {}, TITLE = {Volumetric Differences in Brain Structure in Identical and Fraternal Twins Computed using Riemannian Tensor-Based Morphometry}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-EDITORIAL-BOARD = {yes}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {US,AU}, X-PROCEEDINGS = {no}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/hal-00875380}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{isambert:sfro:2008, AUTHOR = {A. Isambert and V. Grégoire and F. Bidault and M. Benkebil and L. Ramus and J. Bourhis and D. Lefkopoulos}, HOWPUBLISHED = {19e Congrès de la Société Française de Radiothérapie Oncologique (SFRO)}, OPTMONTH = {}, NOTE = {Cancer radiothérapie 12(6-7):743, 2008}, TITLE = {Evaluation d'un algorithme de segmentation automatique des structures d'intérêt dans la sphère ORL}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/isambert-sfro-2008.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Mansi:SFP:08, AUTHOR = {Tommaso Mansi and Maxime Sermesant and Martin Huber and Andrew Taylor and Giacomo Pongiglione and Xavier Pennec and Younes Boudjemline}, HOWPUBLISHED = {Archives de Pédiatrie - Congrès des Sociétés Françaises Médico-chirurgicales Pédiatriques}, MONTH = {February}, NOTE = {Archives de Pédiatrie 15(5):1032 -- Special award for best presentation}, TITLE = {Modélisation électromécanique du coeur et analyse d'images}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {no}, X-INVITED-CONFERENCE = {no}, X-PAYS = {DE,UK,IT}, X-PROCEEDINGS = {no}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Novellas_JFR_08, AUTHOR = {Sébastien Novellas and Grégoire Malandain and Jimena Costa and Jean-Christophe Souplet and Nicholas Ayache and P Chevallier}, HOWPUBLISHED = {Journées Françaises de Radiologie}, MONTH = {October}, OPTNOTE = {}, TITLE = {Apport d'un algorithme de segmentation semi-automatique pour analyse des adénopathies médiastinales}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {no}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Pernod_WCTRMS_08, AUTHOR = {Erik Pernod and Jean-Christophe Souplet and Mikael Cohen and Nicolas Toussaint and Christine Lebrun and Grégoire Malandain}, HOWPUBLISHED = {World Congress for Treatment and Research in Multiple Sclerosis (WCTRIMS)}, MONTH = {September}, OPTNOTE = {}, TITLE = {SepINRIA v1.7.2: Multiple Sclerosis Brain MRI visualisation, comparison and analysis Software}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis, SepINRIA}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{BALDERRAMA_EGEE_08, ADDRESS = {Istanbul, Turkey}, AUTHOR = {Rojas Balderrama, Javier and Diane Lingrand and Erik Pernod and Jean-Christophe Souplet and Xavier Pennec and Johan Montagnat}, HOWPUBLISHED = {Enabling Grid for E-sciencE (EGEE) conference}, MONTH = {September}, NOTE = {EGEE'08 best paper award}, TITLE = {NeuroLOG: neuroscience application workflows execution on the EGEE grid}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-INVITED-CONFERENCE = {no}, X-PAYS = {}, X-PROCEEDINGS = {no}, X-SCIENTIFIC-POPULARIZATION = {no}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {http://hal.inria.fr/hal-00461625/en/}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Souplet:AANa:08, AUTHOR = {Jean-Christophe Souplet and Pierre Fillard and Nicolas Toussaint and Christine Lebrun and Grégoire Malandain}, HOWPUBLISHED = {60th American Academy of Neurology Annual Meeting}, MONTH = {April}, OPTNOTE = {}, TITLE = {SepINRIA: A software to analyse Multiple Sclerosis Brain MRI}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis, SepINRIA}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Souplet:ARSEP:08, ADDRESS = {Paris, France}, AUTHOR = {Jean-Christophe Souplet and Christine Lebrun and Pierre Clavelou and William Camu and Stéphane Chanalet and Nicholas Ayache and Grégoire Malandain}, HOWPUBLISHED = {17th Franco-UK scientific meeting of ARSEP (François Lhermitte Conferences)}, MONTH = {March}, OPTNOTE = {}, TITLE = {A Comparative Study of Atrophy Measurements in Multiple Sclerosis}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Souplet:AANb:08, ADDRESS = {Chicago, USA}, AUTHOR = {Jean-Christophe Souplet and Christine Lebrun and Pierre Clavelou and William Camu and Stéphane Chanalet and Nicholas Ayache and Grégoire Malandain}, HOWPUBLISHED = {60th American Academy of Neurology Annual Meeting}, MONTH = {April}, OPTNOTE = {}, TITLE = {A New Atrophy Measurement Method dedicated to Multiple Sclerosis}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Souplet_ENS_08, ADDRESS = {Nice, France}, AUTHOR = {Jean-Christophe Souplet and Christine Lebrun and Grégoire Malandain}, HOWPUBLISHED = {Journal of Neurology - 18th European Neurological Society Meeting}, MONTH = {June}, OPTNOTE = {}, PAGES = {208}, PUBLISHER = {Springer}, TITLE = {SepINRIA v1.7.1: A Free Software for Lesion Segmentation and Atrophy Evaluation dedicated to Multiple Sclerosis Brain MRI}, VOLUME = {255}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis, SepINRIA}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {yes}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Souplet_JNLF_08, ADDRESS = {Nice, France}, AUTHOR = {Jean-Christophe Souplet and Christine Lebrun and Grégoire Malandain}, HOWPUBLISHED = {Journées de Neurologie de Langue Française}, MONTH = {April}, OPTNOTE = {}, TITLE = {SepINRIA: Un logiciel gratuit dédié à l'analyse d'Images de Résonance Magnétique cérébrales de patients atteints de sclérose en Plaques}, YEAR = {2008}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis, SepINRIA}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-INTERNATIONAL-AUDIENCE = {no}, X-PAYS = {}, X-PROCEEDINGS = {no}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Becker:GermanConf:07, ADDRESS = {Bochum, Germany}, AUTHOR = {Valentin Becker and Tom Vercauteren and von Weyern, Claus Hann and Christian Prinz and Roland M. Schmid and Alexander Meining}, HOWPUBLISHED = {62. Jahrestagung der Deutschen Gesellschaft für Verdauungs- und Stoffwechselkrankheiten}, MONTH = {August}, NOTE = {Zeitschrift für Gastroenterologie 45(8) - Abstract only}, TITLE = {Ultra-hochauflösende, Sondenbasierte, Konfokale Lasermikroskopie in Kombination mit Videomosaicing}, YEAR = {2007}, OPTABSTRACT = {}, DOI = {10.1055/s-2007-988304}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.thieme-connect.com/ejournals/abstract/zfg/doi/10.1055/s-2007-988304}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{bondiau:sfro:2007, AUTHOR = {P.-Y. Bondiau and J. Thariat and K. Bénézery and J. Hérault and C. Dalmasso and S. Marcié and G. Malandain}, HOWPUBLISHED = {18e Congrès de la Société Française de Radiothérapie Oncologique (SFRO)}, OPTMONTH = {}, NOTE = {Cancer radiothérapie 11(6-7):399, 2007}, TITLE = {Doses aux organes à risque cérébraux : optimisation par radiothérapie stéréotaxique robotisée et atlas de segmentation automatique versus radiothérapie conformationnelle tridimensionnelle}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/bondiau-sfro-2007.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{isambert:estro:2007, AUTHOR = {A. Isambert and V. Gregoire and F. Bidault and G. Calais and O. Commowick and G. Malandain and J.B. Ruaud and M. Tomsej and C. Bramoulle and J. Bourhis and D. Lefkopoulos}, HOWPUBLISHED = {Acts of the 26th European Society for Therapeutic Radiology and Oncology (ESTRO)}, OPTMONTH = {}, OPTNOTE = {}, TITLE = {Atlas-based automatic segmentation (ABAS) of head and neck (H&N) structures in conformal radiotherapy (CRT)}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Lebrun:sfn:2007, AUTHOR = {Christine Lebrun and Stéphane Chanalet and Jean-Christophe Souplet and Nicholas Ayache and Grégoire Malandain}, HOWPUBLISHED = {Journées Internationales de la Société Française de Neurologie}, MONTH = {June}, OPTNOTE = {}, TITLE = {Imaging pre-treatment tools and automatic segmentation of lesion burden}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Pennec:ERCIM69:07, AUTHOR = {Xavier Pennec}, HOWPUBLISHED = {ERCIM News No.69, p.15-16}, MONTH = {January}, NOTE = {Special issue on the Digital Patient}, PAGES = {15--16}, TITLE = {From Riemannian Geometry to Computational Anatomy of the Brain}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://ercim-news.ercim.org/images/stories/EN69/EN69.pdf}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{PennecFillard:VoirInvisibleCompAnat:07, AUTHOR = {Xavier Pennec and Pierre Fillard}, HOWPUBLISHED = {In Voir l'invisible, p.112-113, Omniscience}, MONTH = {December}, OPTNOTE = {}, PAGES = {112-113}, TITLE = {Avons-nous tous le même cerveau?}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, ISBN = {978-2-916097-13-8}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{PennecFillard:VoirInvisibleTenseur:07, AUTHOR = {Xavier Pennec and Pierre Fillard}, HOWPUBLISHED = {In Voir l'invisible, p.116-117, Omniscience}, MONTH = {December}, OPTNOTE = {}, PAGES = {116-117}, TITLE = {Les autoroutes de l'information neuronale}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, ISBN = {978-2-916097-13-8}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Souplet:ectrims:2007, AUTHOR = {Jean-Christophe Souplet and Christine Lebrun and Pierre Clavelou and William Camu and Stéphane Chanalet and Nicholas Ayache and Grégoire Malandain}, HOWPUBLISHED = {Congress of the European Committee for Treatment and Research in Multiple Sclerosis (ECTRIMS)}, MONTH = {October}, OPTNOTE = {}, TITLE = {A comparative study of skull stripping methods in relapsing-remitting multiple sclerosis: Emergence of a new automatic segmentation algorithm}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis, skull-stripping}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jean-Christophe.Souplet/Souplet_2007_ECTRIMS_Skullstripping.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Souplet:sfn:2007, AUTHOR = {Jean-Christophe Souplet and Christine Lebrun and Pierre Fillard and Nicholas Ayache and Pierre Clavelou and Grégoire Malandain}, HOWPUBLISHED = {Journées Internationales de la SFN : Sclérose en Plaques (Multiple Sclerosis)}, MONTH = {June}, NOTE = {Abstract in Revue Neurologique (Paris) 2007; 163: 6-7, 725}, TITLE = {SepINRIA : un outil d'évaluation de la charge lésionnelle chez des patients atteints de sclérose en plaques}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis, SepINRIA, MedINRIA}, URL = {https://www-sop.inria.fr/asclepios/Publications/Jean-Christophe.Souplet/Souplet_2007_SFN_SepINRIA.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Vercauteren:DDW:07, AUTHOR = {Tom Vercauteren and Anne Osdoit and Aymeric Perchant and Sacha Loiseau}, HOWPUBLISHED = {Proc. Digestive Disease Week (DDW'07)}, MONTH = {April}, NOTE = {Abstract in Gastrointestinal Endoscopy 65(5):AB352}, TITLE = {Mosaicing of Confocal Microscopic Video Sequences: Larger Field of View and still Higher Resolution!}, YEAR = {2007}, OPTABSTRACT = {}, DOI = {10.1016/j.gie.2007.03.900}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tom.Vercauteren/MosaicingPoster-DDW07-Vercauteren.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Vercauteren:ERCIMNews:07, AUTHOR = {Tom Vercauteren and Aymeric Perchant and Nicholas Ayache}, HOWPUBLISHED = {ERCIM News No.69}, MONTH = {April}, OPTNOTE = {}, PAGES = {34--35}, TITLE = {In Vivo Microscopy for Real-Time Structural and Functional Cellular Imaging}, YEAR = {2007}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tom.Vercauteren/InVivoMicroscopy-ERCIMNews07-Vercauteren.pdf}, URL-PUBLISHER = {http://ercim-news.ercim.org/content/view/153/301/}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{vauchelles:master:2006, OPTADDRESS = {}, AUTHOR = {Romain Vauchelles}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {Master Imagerie pour la Biologie, Université de Rouen}, TITLE = {Mise en place d'un programme d'analyse d'images en wound healing et mise en évidence du rôle de l'activation de Arf 1 par le GEF ARNO dans la migration cellulaire}, TYPE = {Master's thesis}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{VPH:2006, AUTHOR = {Nicholas Ayache and Jean-Pierre Boissel and Soren Brunak and Gordon Clapworthy and Guy Lonsdale and Jochen Fingberg and Alejandro Frangi and Gustavo Deco and Peter Hunter and Poul Nielsen and Matt Halstead and Rod Hose and Isabelle Magnin and Fernando Martin-Sanchez and Peter Sloot and Jaap Kaandorp and Alfons Hoekstra and Van Sint Jan, Serge and Marco Viceconti}, HOWPUBLISHED = {Virtual Physiological Human: White paper, EC - DG INFSO and DG JRC}, OPTMONTH = {}, OPTNOTE = {}, TITLE = {Towards Virtual Physiological Human: Multilevel Modelling and Simulation of the Human Anatomy and Physiology}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://europa.eu.int/information_society/activities/health/docs/events/barcelona2005/ec-vph-white-paper2005nov.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{bernasconi06:AES, AUTHOR = {N. Bernasconi and P. Besson and T. Mansi and A. Bernasconi}, HOWPUBLISHED = {Annual Meeting of the American Epilepsy Society AES 2006 (abstracts)}, OPTMONTH = {}, OPTNOTE = {}, TITLE = {MRI Texture Analysis Enhances the Visibility of Cortical Tubers in Tuberous Sclerosis}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tommaso.Mansi/bernasconi06AES.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Fillard:TensorWorkshop:06, AUTHOR = {Pierre Fillard and Nicolas Toussaint and Xavier Pennec}, OPTHOWPUBLISHED = {}, MONTH = {November}, NOTE = {Guest paper at the Similar Tensor Workshop, Las Palmas, Spain.}, TITLE = {MedINRIA: DT-MRI Processing and Visualization Software}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Pierre.Fillard/Fillard.TensorWorkshop.06.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{isambert:sfro:2006, AUTHOR = {Aurélie Isambert and Guillaume Bonniaud and R. Lery and R. Comtat and Jean-Christophe Diaz and Grégoire Malandain and Dimitri Lefkopoulos}, HOWPUBLISHED = {17e Congrès de la Société Française de Radiothérapie Oncologique (SFRO)}, MONTH = {November}, NOTE = {Cancer radiothérapie 10(6-7):507, 2006}, TITLE = {Evaluation sur fantôme d'un logiciel de recalage d'images multimodales automatique pour la radiothérapie}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{isambert:astro:2006, ADDRESS = {Philadelphia, Pennsylvania}, AUTHOR = {Aurélie Isambert and Frédéric Dhermain and F. Bidault and Guillaume Bonniaud and R. Lery and Grégoire Malandain and Olivier Commowick and Jean-Christophe Diaz and Jean Bourhis and Dimitri Lefkopoulos}, HOWPUBLISHED = {48th Annual Meeting of the American Society for Therapeutic Radiology and Oncology (ASTRO)}, MONTH = {November}, OPTNOTE = {}, TITLE = {Evaluation of Multimodality Image Registration Software and Atlas-based Automatic Segmentation for Delineation of Organs at Risk (OAR) in the Brain in Conformal Radiotherapy (CRT)}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {Multimodality image registration, atlas-based automatic segmentation, radiation therapy}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{isambert:sfpm:2006, AUTHOR = {Aurélie Isambert and Frédéric Dhermain and Guillaume Bonniaud and F. Bidault and A. Beaudre and Grégoire Malandain and Olivier Commowick and Jean-Christophe Diaz and M. Ricard and Jean Bourhis and Dimitri Lefkopoulos}, HOWPUBLISHED = {Congrès annuel de la Société Française des Physiciens Médicaux (SFPM)}, MONTH = {June}, OPTNOTE = {}, TITLE = {Evaluation d'un logiciel de recalage d'images multimodal et d'un outil de segmentation automatique des organes à risque (OAR) intra-crâniens en situation clinique d'une radiothérapie conformationnelle 3D (RTC3D)}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Konukoglu:DIMACS:2006, AUTHOR = {Ender Konukoglu and Olivier Clatz and Pierre-Yves Bondiau and Hervé Delingette and Nicholas Ayache}, HOWPUBLISHED = {Presented in DIMACS Workshop: Computational Tumor Modeling}, OPTMONTH = {}, OPTNOTE = {}, TITLE = {Extrapolating tumor invasion margins for physiologically determined radiotherapy regions}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Pennec:Inedit:06, AUTHOR = {Xavier Pennec}, HOWPUBLISHED = {INédit 56, p.4}, MONTH = {November}, OPTNOTE = {}, TITLE = {A European paediatric platform}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/actualites/inedit/inedit56_indusa.en.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Vercauteren:RSNA:06, ADDRESS = {Chicago, Illinois}, AUTHOR = {Aymeric Perchant and Tom Vercauteren and Charlotte Cavé and Sacha Loiseau}, HOWPUBLISHED = {Proc. Radiological Society of North America (RSNA'06)}, MONTH = {December}, NOTE = {Abstract only}, TITLE = {Mosaicing of Confocal Microscopic In Vivo Soft Tissue Video Sequences Improves Multimodality Approach}, YEAR = {2006}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Azar:MEng:2005, OPTADDRESS = {}, AUTHOR = {Antoine Azar}, OPTMONTH = {}, NOTE = {In collaboration with Siemens Corporate Research, NJ, USA}, SCHOOL = {Master IGMMV, Université de Nice Sophia-Antipolis}, TITLE = {An Interactive Intensity- and Feature-Based Non-Rigid Registration Framework for 3D Medical Images}, TYPE = {Master's Thesis}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615601}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{duhamel:master:2005, OPTADDRESS = {}, AUTHOR = {Olivier Duhamel}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {Université Paul Sabatier, Toulouse}, TITLE = {Validation de modèles mathématiques en biologie à l'aide du traitement d'image}, TYPE = {Master's Thesis}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{mansi05:mscthesis, OPTADDRESS = {}, AUTHOR = {T. Mansi}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {Politecnico di Torino (Italy) / ENST Paris (France)}, TITLE = {Automatic Segmentation of Focal Cortical Dysplasia Lesions on MRI Images using Geometric Deformable Models}, OPTTYPE = {}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{bernasconi05:AES, AUTHOR = {O. Colliot and T. Mansi and N. Bernasconi and V. Naessens and D. Klironomos and A. Bernasconi}, HOWPUBLISHED = {Annual Meeting of the American Epilepsy Society AES 2005 (abstracts)}, OPTMONTH = {}, OPTNOTE = {}, TITLE = {Automatic delineation of focal cortical dysplasia lesion on MRI}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Tommaso.Mansi/colliot05AES.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Costa:SFPM:05, ADDRESS = {Avignon, France}, AUTHOR = {Jimena Costa and Hervé Delingette and Jean-Christophe Diaz and William Wibault and Ann Egelmeers}, HOWPUBLISHED = {Proceedings of the 44èmes Journées Scientifiques de la Société Française de Physique Médicale (SFPM)}, MONTH = {June}, OPTNOTE = {}, TITLE = {Towards an automatic delineation of lower abdomen structures for conformational radiotherapy based on CT images}, YEAR = {2005}, ABSTRACT = {The delineation of anatomical structures based on images of the lower abdomen in the frame of dose calculation for conformational radiotherapy is very complex to automatize. We present here the first results of a semi-automatic delineation of the bladder in tomodensitometric (CT) images. The method we have used is based on deformable templates whose deformation is guided by the image and by the user as well, in case the latter desires to correct the automatic delineation. In order to validate our approach, we use a set of CT images that have been segmented by medical experts. These hand-made contours act in fact as "ground truth", allowing for an objective evaluation of the performance of our algorithm. }, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Costa/Costa_Avignon_2005.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{dugas:ectrims:2005, AUTHOR = {G. Dugas-Phocion and C. Lebrun and S. Chanalet and M. Chatel and N. Ayache and G. Malandain}, HOWPUBLISHED = {21th Congress of the European Committee for Treatment and Research in Multiple Sclerosis (ECTRIMS)}, MONTH = {September}, OPTNOTE = {}, TITLE = {Automatic segmentation of white matter lesions in multi-sequence MRI of relapsing-remitting multiple sclerosis patients}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Linguraru:JN:05, AUTHOR = {D. Galanaud and D. Dormont and J.P. Brandel and M.G. Linguraru and E. Bardinet and J. Chiras}, HOWPUBLISHED = {Journées de Neuroradiologie de Langue Française}, OPTMONTH = {}, NOTE = {Journal of Neuroradiology 32(2):79}, PUBLISHER = {Masson}, TITLE = {Exploration des Maladies a Prions par IRM Multimodalitaire}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{isambert:estro:2005, AUTHOR = {A. Isambert and F. Dhermain and A. Beaudre and G. Malandain and O. Commowick and J.C. Diaz and F. Bidault and P.Y. Bondiau and J. Bourhis and M. Ricard and D. Lefkopoulos}, HOWPUBLISHED = {Acts of the 24th European Society for Therapeutic Radiology and Oncology (ESTRO 2005)}, OPTMONTH = {}, OPTNOTE = {}, TITLE = {Requirements for the use of an atlas-based automatic segmentation for delineation of Organs at risk (OAR) in conformal radiotherapy (CRT): quality assurance (QA) and preliminary results for 22 adult patients with primary brain tumors}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Gregoire.Malandain/isambert-estro-2005.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Linguraru:ERCIM:2005, AUTHOR = {M.G. Linguraru and N. Ayache}, HOWPUBLISHED = {ERCIM News,No.60, Special Issue on Biomedical Informatics}, OPTMONTH = {}, OPTNOTE = {}, PAGES = {52--53}, TITLE = {Definition and Evaluation of MRI-Based Measures for the Neuroradiological Investigation of Creutzfeldt-Jakob Diseases}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Linguraru/Linguraru_ERCIM_2005.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{reyes:snm:2005, ADDRESS = {Toronto, Canada}, AUTHOR = {Mauricio A. Reyes and Gregoire Malandain and Nicholas Ayache and Jacques Darcourt and Pierre M. Koulibaly}, HOWPUBLISHED = {52nd Annual Meeting of the Society of Nuclear Medicine}, MONTH = {June}, OPTNOTE = {}, TITLE = {Respiratory Motion Compensation within Emission Tomographic Reconstruction}, YEAR = {2005}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Fillard:Master:04, OPTADDRESS = {}, AUTHOR = {Pierre Fillard}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {Master Optique-Image-Vision spécialité recherche, Université Jean-Monnet Saint Etienne}, TITLE = {Un cadre riemannien pour l'imagerie du tenseur}, TYPE = {rapport de Master}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Fillard/rapportDEA.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{hufnagel:diplomarbeit:2004, ADDRESS = {Lübeck, Germany}, AUTHOR = {Heike Hufnagel}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {University of Luebeck}, TITLE = {Non-linear 2D and 3D Registration Using Block-Matching and B-Splines}, TYPE = {Diplomarbeit}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {https://www-sop.inria.fr/asclepios/Publications/Heike.Hufnagel/huf_diplomarbeit2004.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, URL-HAL = {https://hal.inria.fr/inria-00615991}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{bensa:aan:2004, AUTHOR = {Caroline Bensa and Grégoire Malandain and Stéphane Chanalet and Christelle Bertogliati and Octave Migneco and Marcel Chatel and Christine Lebrun}, HOWPUBLISHED = {American Academy of Neurology, 56th Annual Meeting}, MONTH = {April-May}, OPTNOTE = {}, TITLE = {Multiple Sclerosis and Mild Cognitive Impairment}, YEAR = {2004}, ABSTRACT = {OBJECTIVE: Detection and follow-up of cognitive disorders in relapsing-remitting multiple sclerosis (RRMS) patients with spontaneous memory complain. BACKGROUND: Sixty per cent of patients with RRMS present cognitive deficiency. Evaluation and characterization of these troubles are difficult even if different standardized batteries exist, which tend to harmonization.Early diagnosis of cognitive impairment in the first years of the disease could allow early taking care and follow-up. Clinical correlations with lesion load on brain MRI could be useful to distinguish specific patients profiles. DESIGN/METHODS: Prospective study with baseline and 2 annual follow-up, of thirty patients, combining clinical examination, neuropsychological tests, brain MRI and Tc99m-HMPAO-SPECT. Neuropsychological tests used were: Mnesic capacities: Mini mental status, Brief Repeatable Battery: Selective Reminding Test with delayed recall and 10/36 Spatial recall test with delayed recall, Grober&Buschke test. Attentional capacities: Paced Auditory Serial Addition Test (PASAT) and verbal fluency, Stroop test A, B, C, Trailmaking test, Mattis Scale. Linguistic capacities: Boston naming test. Visuo-spatial capacities: WAIS-R (cubes). Visuo-constructive praxis: BEC. MRI protocol : T2 SE 2 echos (2mm 256*256) + T1 3D acquisition GRE (1mm 256*256) + FLAIR (4mm, 256*256) + T1gado SE (2mm 256*256). SPECT acquisition was performed one hour after injection of 925 MBq of 99mTc-HMPAO,using a triple head camera equipped with UHR fan-beam collimators. RESULTS: 8 men and 22 women were recruited, mean age: 39.97 years (+/- 8.4); mean EDSS: 2.2 (+/- 1, 49). Mean evolution duration: 120.4 months (+/- 96, 71). We found 8 established mnesic deficiency (27%), 20 established attentional deficiency (66%), 9 executive dysfunctions (30%), 6 language disability (20%), 18 visuospatial perception alteration (60%) and 6 (20%) visuoconstructive praxis alteration. Five patients (17%) had no objective troubles revealed by serial tests. On 27 analyzed MRI, 22 patients were Barkhof + ; Executive functions alteration was positievly correlated to gadolinium enhancement and negatively to infratentorial structures (IS) lesion load (LL). T1 and IS LL also correlated to mnesic deficiency. Simultaneously, SPECT data were visually analyzed after registration with MRI in FSE-T2 and FLAIR-T2 modalities. Local hypoperfusions were related to T2 hypersignals and T1 hyposignal in the same area. No significant difference in cognitive function was found between patient groups with normal or abnormal SPECT. CONCLUSIONS: Our results indicate that most of patient had cognitive disorders at early stage of their RR disease. On the baseline analysis, patients without objective cognitive impairment had T2 lesions in CC and IS. T2 lesion load was correlated with EDSS and time from diagnosis. Annual follow-up will allow us to develop comments.}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{WhitePaper:HealthGrid:04, ANNOTE = {Contribution to chap. 3 (Medical Imaging and Image Processing) and chap. 4 (Modelling the Human Body for Therapy Planning and Computer Assisted Interventions)}, AUTHOR = {Ignacio Blanquer and Vincent Hernandez and Guy Lonsdale and Kevin Dean and Sharon Lloyd and Richard McClatchey and Johan Montagnat and Mike Brady and Xavier Pennec and Howard Bolofsky and Chris Jones and Martin Hofmann and Tony Solmonides and Ilidio C. Oliveira and Juan Pedro Sanchez and Victoria Lopez and George De Moor and Brecht Claerhout and Jean A.M. Harveg}, HOWPUBLISHED = {Edited by Cisco System. Also in Studies in Health Technolgy and Informatics volume 112, 2005, p.249-321 (PMID: 15923733)}, MONTH = {September}, OPTNOTE = {}, TITLE = {HealthGrid White Paper: http://whitepaper.healthgrid.org/}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {HealthGrid}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Boisvert:navigation:2004, AUTHOR = {Jonathan Boisvert}, OPTHOWPUBLISHED = {}, INSTITUTION = {École Polytechnique de Montréal}, MONTH = {November}, OPTNOTE = {}, TITLE = {Système de navigation pour les chirurgies minimalement invasives du rachis}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{bondiau:rsna:2004, ADDRESS = {Chicago}, AUTHOR = {PY Bondiau and G Malandain and O Commowick and PY Marcy and S Chanalet and N Ayache}, HOWPUBLISHED = {90th Scientific Assembly and Annual Meeting of the Radiological Society of North America (RSNA)}, OPTMONTH = {}, OPTNOTE = {}, TITLE = {Atlas-based Automatic Segmentation of MR Images: Validation Study on the Brainstem in Radiotherapy Context}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Commowick:SFPM:2004, ADDRESS = {Montpellier, France}, AUTHOR = {Olivier Commowick and Pierre-Yves Bondiau and Grégoire Malandain}, HOWPUBLISHED = {Proceedings of the 43th Journées Scientifiques de la Société Française de Physique Médicale (SFPM)}, MONTH = {June}, OPTNOTE = {}, TITLE = {Segmentation automatique des tissus cérébraux en présence de structures pathologiques}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{dugas:ectrims:2004, AUTHOR = {Guillaume Dugas-Phocion and Miguel Ángel González Ballester and Christine Lebrun and Stéphane Chanalet and Caroline Bensa and Marcel Chatel and Nicholas Ayache and Grégoire Malandain}, HOWPUBLISHED = {20th Congress of the European Committee for Treatment and Research in Multiple Sclerosis (ECTRIMS)}, MONTH = {October}, OPTNOTE = {}, TITLE = {Automatic segmentation of white matter lesions in T2 FLAIR MRI of relapsing-remitting multiple sclerosis patients}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{dugas:jnlf:2004, AUTHOR = {Guillaume Dugas-Phocion and González Ballester, Miguel Ángel and Christine Lebrun and Stéphane Chanalet and Caroline Bensa and Grégoire Malandain}, HOWPUBLISHED = {Journées de Neurologie de Langue Française}, MONTH = {April}, OPTNOTE = {}, TITLE = {Segmentation automatique des hypersignaux de la substance blanche (HSB) sur des IRM T2 FLAIR de patients atteints de forme rémittente de sclérose en plaques}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{lebrun:jnlf:2004, AUTHOR = {Christine Lebrun and Caroline Bensa and Grégoire Malandain and Christelle Bertogliati and Octave Migneco and M.-N. Magnie}, HOWPUBLISHED = {Journées de Neurologie de Langue Française}, MONTH = {April}, OPTNOTE = {}, TITLE = {Sclérose en plaque et troubles cognitifs mineurs}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Linguraru:JFR:04, AUTHOR = {M.G. Linguraru and D. Galanaud and D. Dormont and B. Faucheaux and S. Haïk and J.J. Hauw and J. Chiras and E. Bardinet and González Ballester, M.A. and P. Cozzone and N. Ayache and J.P. Brandel}, HOWPUBLISHED = {Journées Françaises de Radiologie}, OPTMONTH = {}, NOTE = {Journal de Radiologie 85(6):1394}, TITLE = {Détection et Quantification Automatique des Hypersignaux en IRM dans la Maladie de Creutzfeldt-Jakob}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Pennec:Inedit:04, AUTHOR = {Xavier Pennec}, HOWPUBLISHED = {INédit 43, p.6}, MONTH = {March}, OPTNOTE = {}, TITLE = {Geodesics for statistics}, YEAR = {2004}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.inria.fr/actualites/inedit/inedit43_partb3.en.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Bardyn:DEA:03, OPTADDRESS = {}, AUTHOR = {Thibaut Bardyn}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {DEA Mathématiques, Vision, Apprentissage, École Normale Supérieure Cachan}, TITLE = {Modèles biomécaniques déformables : introduction de méthodes algébriques pour le calcul de la déformation}, TYPE = {rapport de DEA}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{commowick:DEA:03, OPTADDRESS = {}, AUTHOR = {Olivier Commowick}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {DEA Mathématiques, Vision, Apprentissage, École Normale Supérieure Cachan}, TITLE = {Utilisation d'atlas anatomiques numériques pour la cancérologie}, TYPE = {rapport de DEA}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{bensa:jnlf:2003, AUTHOR = {C. Bensa and S. Chanalet and G. Malandain and C. Bertogliati and P. Bedoucha and M.N. Mauro and M. Chatel and C. Lebrun}, HOWPUBLISHED = {Journées de Neurologie de Langue Française}, MONTH = {April}, NOTE = {Revue Neurologique, tome 159, page 2S63}, TITLE = {Sclérose en plaques et troubles cognitifs mineurs}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{bensa:ectrims:2003, AUTHOR = {C. Bensa and S. Chanalet and G. Malandain and C. Bertogliatti and P. Bedoucha and M.N. Magnié and M. Chatel and C. Lebrun}, HOWPUBLISHED = {19th Congress of the European Committee for Treatment and Research in Multiple Sclerosis (ECTRIMS)}, MONTH = {September}, NOTE = {Multiple Sclerosis, P545, pp S136}, TITLE = {Multiple sclerosis and mild cognitive impairment}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{lebrun:ectrims:2003, AUTHOR = {C. Lebrun and D. Rey and S. Chanalet and N. Ayache and M. Chatel and G. Malandain}, HOWPUBLISHED = {19th Congress of the European Committee for Treatment and Research in Multiple Sclerosis (ECTRIMS)}, MONTH = {September}, NOTE = {Multiple Sclerosis, P455, pp S112}, TITLE = {First validation experiments of a 3-D automatic algorithm based on a vector field analysis to detect and quantify volume variation of multiple sclerosis lesions}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{lebrun-rey:sfn:2003, AUTHOR = {C. Lebrun and D. Rey and S. Chanalet and V. Bourg and M. Chatel and N. Ayache and G. Malandain}, HOWPUBLISHED = {10èmes Journées Jean-Denis-Degos Thérapeutique et Neurologie}, MONTH = {December}, OPTNOTE = {}, ORGANIZATION = {Société Française de Neurologie}, TITLE = {Intérêt du recalage automatique des IRM cérébrales dans le suivi et la décision thérapeutique : application à la sclérose en plaques}, YEAR = {2003}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Checoury:DEA:02, OPTADDRESS = {}, AUTHOR = {Cédric Checoury}, MONTH = {Septembre}, OPTNOTE = {}, SCHOOL = {Université de Nice Sophia-Antipolis}, TITLE = {Optimisation de modèles physiques de tissus mous pour la simulation chirurgicale}, TYPE = {Rapport de DEA}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {simulation}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/Checoury-stage-2002.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Clatz:DEA:02, OPTADDRESS = {}, AUTHOR = {Olivier Clatz}, MONTH = {Septembre}, OPTNOTE = {}, SCHOOL = {ENS Cachan}, TITLE = {Analysis and prediction of the brain deformation during a neurosurgical procedure}, TYPE = {Rapport de DEA}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Bondiau:SFRO:02, ADDRESS = {Bordeaux}, AUTHOR = {P.-Y. Bondiau and G. Malandain and P.-Y. Marcy and F. Peyrade and M. Frenay and J.-P. Gérard}, HOWPUBLISHED = {13ème Congrès National de la Société Française de Radiothérapie Oncologique (SFRO)}, MONTH = {November}, OPTNOTE = {}, TITLE = {Contourage automatique de l'encépahle utilisant la fusion d'image avec atlas : résultats sur 3 patients}, YEAR = {2002}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Benezery:01, OPTADDRESS = {}, AUTHOR = {Karen Bénézery}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {DEA Rayonnements et Imagerie en Médecine, Université Toulouse III}, TITLE = {Recalage et fusion d'images scanner et IRM du pelvis : utilisation dans le traitement des tumeurs prostatique}, OPTTYPE = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Perret:01, OPTADDRESS = {}, AUTHOR = {Florence Perret}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {École Centrale de Paris}, TITLE = {Correction et segmentation d'images appliquées à la radiothérapie}, OPTTYPE = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Stefanescu:DEA:01, OPTADDRESS = {}, AUTHOR = {Radu-Constantin Stefanescu}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {DEA Algorithmique, Filière géométrie algorithmique, Formes et Images -- Ecole Polytechnique}, TITLE = {Parallélisation de l'algorithme des démons}, OPTTYPE = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Unia:01, OPTADDRESS = {}, AUTHOR = {J. Unia}, MONTH = {June}, NOTE = {DEA Images et Systèmes}, SCHOOL = {Université de Lyon}, TITLE = {Suivi Temporel de structures cérébrales dans des IRM à l'aide de modèles biomécaniques}, OPTTYPE = {}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Bondiau:SFRO:01, ADDRESS = {Nice}, AUTHOR = {P.Y. Bondiau and O. Ostapiak and G. Malandain and T. Toubiana and K. Benezery and J.M. Hannoun-Levi and R.J. Bensadoun and A. Courdi and D. Leschi and P. Chauvel and J.P. Gerard}, HOWPUBLISHED = {Proc. du premier atelier de radiothérapie assistée par l'image}, MONTH = {4 et 5 mai}, OPTNOTE = {}, ORGANIZATION = {SFRO}, TITLE = {Fusion de la tomographie par émission de positons (TEP) fonctionnelle et du Scanner dosimétrique : Etude de faisabilité pour le traitement des tumeurs cérébrales}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{benezery-al:SFRO:2001, ADDRESS = {Paris}, AUTHOR = {K. Bénézery and F. Perret and P.-Y. Bondiau and G. Malandain and N. Ayache}, HOWPUBLISHED = {12ème Congrès de la Société Française de Radiothérapie Oncologique (SFRO)}, MONTH = {22-23 Novembre}, OPTNOTE = {}, TITLE = {Recalage et Fusion d'images Scanner et IRM du pelvis : utilisation dans le traitement du cancer de la prostate}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Chau:JFR:01, ADDRESS = {Paris, FRANCE}, AUTHOR = {Y. Chau and D. Rey and G. Malandain and C. Raffaelli and B. Padovani}, HOWPUBLISHED = {Journées Françaises de Radiologie, JFR'2001}, MONTH = {October}, OPTNOTE = {}, TITLE = {Extraction automatique des structures arborescentes pulmonaires, semi-automatique des segments pulmonaires à partir de TDM thoraciques normales}, YEAR = {2001}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{bensassi2000, OPTADDRESS = {}, AUTHOR = {W. Bensassi}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {Ecole Polytechnique}, TITLE = {Segmentation d'images cérébrales en utilisant les modèles déformables}, TYPE = {Rapport de D.E.A.}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{bianchi2000, OPTADDRESS = {}, AUTHOR = {Gérald Bianchi}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {DEA Informatique, Productique, Imagerie médicale -- université Blaise Pascal Clermont-Ferrand II}, TITLE = {Réalité Augmentée en chirurgie hépatique}, TYPE = {Rapport de D.E.A.}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{chau2000, OPTADDRESS = {}, AUTHOR = {Yves Chau}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {DEA Algorithmique, Robotique, Automatique, Vision, Image et Signal -- université de Nice-Sophia Antipolis}, TITLE = {Extraction automatique des structures arborescentes pulmonaires -- Création semi-automatique des segments pulmonaires sur des images tomodensitométriques normales}, TYPE = {Rapport de D.E.A.}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{flandin2000, OPTADDRESS = {}, AUTHOR = {Guillaume Flandin}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {DEA Signal, Image, Acoustique - ENSEEIHT, Toulouse}, TITLE = {Filtrage adaptatif par Analyse Tensorielle}, TYPE = {Rapport de D.E.A.}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Granger-RAP00, OPTADDRESS = {}, AUTHOR = {Sébastien Granger}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {École des Mines de Paris - Centre de Mathematiques Appliques}, TITLE = {Évaluation de la précision du recalage 3D de surfaces-Application à l'implantologie dentaire assistée par ordinateur-Rapport de fin de première année}, OPTTYPE = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Guilhaurre2000, OPTADDRESS = {}, AUTHOR = {E. Guilhaurre}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {Ecole ESSI}, TITLE = {Reconstruction et déformation contrainte de surfaces}, OPTTYPE = {}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Linguraru:PRS:00, OPTADDRESS = {}, AUTHOR = {M.G. Linguraru}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {University of Oxford}, TITLE = {Filtering hint Images for Microcalcification Detection: An Anisotropic Diffusion Approach}, TYPE = {PhD Transfer Thesis}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{myx2000, OPTADDRESS = {}, AUTHOR = {Aline Myx}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {DEA Signaux et Images en Biologie et Médecine - université d'Angers}, TITLE = {Visualisation du déplacement des viscères pelviens par analyse d'images dans la chirurgie du prolapsus rectal}, TYPE = {Rapport de D.E.A.}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{raynaud2000, OPTADDRESS = {}, AUTHOR = {Niels Raynaud}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {DEA Mathématiques, Vision, Apprentissage -- ENS Cachan}, TITLE = {Segmentation d'images hépatique par analyse statistique}, TYPE = {Rapport de D.E.A.}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Etienne:CPP:00, AUTHOR = {D. Etienne and A. Stankoff and X. Pennec and S. Granger and A. Lacan and R. Derycke}, HOWPUBLISHED = {4th Congresso Panamericano de Periodontologia, 17-19 august 2000, Santiago, Chili}, OPTMONTH = {}, OPTNOTE = {}, TITLE = {A new approach for dental Implant aided surgery}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, odontology}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{lebrun-al2000, AUTHOR = {C. Lebrun-Frenay and D. Rey and G. Malandain and S. Chanalet and N. Ayache and M. Chatel}, HOWPUBLISHED = {16th Congress of the European Committee for Treatment and Research in Multiple Sclerosis}, MONTH = {septembre 6-9}, NOTE = {Revue Neurologique (Supplement), 156(3S104)}, TITLE = {Detection and quantification of MS lesions MRI variations by mathematical differential operators}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Rey00, AUTHOR = {D. Rey and C. Lebrun-Frenay and G. Malandain and S. Chanalet and N. Ayache and M. Chatel}, HOWPUBLISHED = {American Academy of Neurology, 52nd Annual Meeting}, MONTH = {May}, NOTE = {Neurology (Supplement 3) 54(7):123}, TITLE = {A New Method to Detect and Quantify Evolving MS Lesions by Mathematical Operators}, YEAR = {2000}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Buisson99, OPTADDRESS = {}, AUTHOR = {F. Buisson}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {DESS Génie Biomédical pour l'Ingénieur - Université de Nice}, TITLE = {Segmentation et quantification du cartilage de l'articulation fémoro-tibiale de rat à partir d'images micro-IRM}, TYPE = {Rapport de DESS}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{scapel99, OPTADDRESS = {}, AUTHOR = {N. Scapel}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {Ecole Centrale de Paris}, TITLE = {Optimisation topologique et géométrique d'un maillage surfacique dynamique : application à la segmentation des images médicales volumiques}, TYPE = {Stage de 3ème année}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Sermesant99, OPTADDRESS = {}, AUTHOR = {Maxime Sermesant}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {Ecole Centrale Paris}, TITLE = {Diffusion anisotrope et segmentation par modèles déformables sur des images échographiques 4-D du coeur}, TYPE = {Stage de 3ème année}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {anisotropic diffusion, 4D, Heart, segmentation, ultrasound, medical images, motion tracking}, URL = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/diffanisoSermesant.pdf}, OPTURL-PUBLISHER = {}, POSTSCRIPT = {https://www-sop.inria.fr/asclepios/Publications/Maxime.Sermesant/diffanisoSermesant.ps.gz}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Bondiau:RSNA:99, ADDRESS = {Chicago}, AUTHOR = {P.Y. Bondiau and G. Malandain and K. Benezery and A. Roche and R. Ferrand and D. Pontvert and J. L. Habrand and J. N. Bruneton}, HOWPUBLISHED = {Proc of RSNA'99}, MONTH = {27 nov au 3 déc}, NOTE = {Supplement to Radiology 1999; 213, 236}, TITLE = {Full Automatic CT Scan and MRI Matching : Use for Brain Tumor Radiotherapy}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Gonzalez:MICCAI:1999, AUTHOR = {González Ballester, M. A.}, HOWPUBLISHED = {Tutorial on Recent Advances in Image Segmentation at MICCAI}, MONTH = {September}, OPTNOTE = {}, TITLE = {Accurate Shape Modelling and Measurement Using Estimates of Partial Volume Effects}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{film-paleontologie-1999, AUTHOR = {Bertrand Mafart and Denis Méline and Alain Silvestre and Gérard Subsol}, HOWPUBLISHED = {Audiovisual material produced by INRIA audiovisuel}, OPTMONTH = {}, OPTNOTE = {}, TITLE = {Imagerie 3D et Paléontologie : les différences de forme entre le crâne de l'Homme Moderne et de l'Homme de Tautavel}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {video}, URL = {http://www.inria.fr/multimedia/Videotheque/0-Fiches-Videos/451-fra.html}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Mafart99, AUTHOR = {B. Mafart and D. Méline and A. Silvestre and G. Subsol}, HOWPUBLISHED = {vidéo INRIA}, MONTH = {September}, OPTNOTE = {}, TITLE = {Imagerie 3D et paléontologie : les différences de forme entre le crâne de l'Homme Moderne et de l'Homme de Tautavel}, YEAR = {1999}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Ourselin98, OPTADDRESS = {}, AUTHOR = {S. Ourselin}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {université de Nice / Sophia Antipolis}, TITLE = {Alignement automatique de coupes histologiques pour la reconstruction et l'analyse tridimensionnelles}, TYPE = {Rapport de D.E.A.}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Rey98, OPTADDRESS = {}, AUTHOR = {D. Rey}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {université de Clermont-Ferrand / ISIMA}, TITLE = {Détection et quantification automatiques de processus évolutifs dans des images tridimensionnelles}, TYPE = {Rapport de D.E.A.}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {multiple sclerosis}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Cachier:DEA:98, AUTHOR = {P. Cachier}, HOWPUBLISHED = {Rapport de stage de DEA}, MONTH = {July}, OPTNOTE = {}, TITLE = {Recalage d'images ultrasonores tridimensionelles}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Frison, AUTHOR = {Béatrice Frison}, HOWPUBLISHED = {Rapport de stage de $2^{\rm e}$ année de l'ESSI}, MONTH = {September}, OPTNOTE = {}, TITLE = {Segmentation des réseaux vasculaires à l'aide d'outils de topologie discrète}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Guirardel:Stage:98, AUTHOR = {Florence Guirardel}, HOWPUBLISHED = {Rapport de stage de 2eme année de l'ENSIMAG}, MONTH = {septembre}, OPTNOTE = {}, TITLE = {Segmentation d'images à l'aide des Level Sets}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Roux:Stage:98, AUTHOR = {Jérémie Roux}, HOWPUBLISHED = {Rapport de stage de fin d'études de l'École Centrale de Paris}, MONTH = {juin}, OPTNOTE = {}, TITLE = {Extraction de mouvement à partir de séquences temporelles d'images ultrasonores 3D-cardiaques}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Subsol98.4, AUTHOR = {G. Subsol}, HOWPUBLISHED = {DIKU International Summer School'98 - Shape Variation - University of Copenhagen - Danemark}, OPTMONTH = {}, OPTNOTE = {}, TITLE = {A scheme for automatically building 3D morphometric anatomical atlases based on feature lines: a list of references}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.inria.fr/epidaure/personnel/subsol/REFERENCES/references.html}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Subsol98.3, AUTHOR = {G. Subsol and J. Montagnat and S. Ourselin and L. Soler}, OPTHOWPUBLISHED = {}, INSTITUTION = {INRIA / Sanofi-Recherche}, OPTMONTH = {}, NOTE = {Étude de faisabilité}, TITLE = {Algorithmes de traitement d'images tridimensionnelles pour des applications pharmaceutiques}, YEAR = {1998}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Cal97, OPTADDRESS = {}, AUTHOR = {Guillaume Calmon}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {École des Mines de Paris}, TITLE = {Mesure des variations de volume dans des images médicales tridimensionnelles}, OPTTYPE = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Gonzalez:Transfer:1997, OPTADDRESS = {}, AUTHOR = {González Ballester, M. A.}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {University of Oxford}, TITLE = {Computer-Aided MRI-Based Analysis of Brain Morphology}, TYPE = {DPhil Transfer Thesis}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{jourdan97, OPTADDRESS = {}, AUTHOR = {S. Jourdan}, MONTH = {June}, OPTNOTE = {}, SCHOOL = {université de Nice-Sophia Antipolis}, TITLE = {Étude statistique d'images SPECT fonctionnelles à l'aide du logiciel SPM}, TYPE = {Rapport de D.E.A.}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Linguraru:MsC:97, OPTADDRESS = {}, AUTHOR = {M.G. Linguraru}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {Universitatea Lucian Blaga Sibiu}, TITLE = {Aplicatii ale Calculatoarelor si Segmenatarilor de Imagini in Medicina}, TYPE = {MSc Thesis}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{rappdea-picinbonno, OPTADDRESS = {}, AUTHOR = {Guillaume Picinbono}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {université de Nice-Sophia Antipolis}, TITLE = {Modèle géométrique de contour déformable implicite pour la segmentation et la simulation}, OPTTYPE = {}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {thesis, reconstruction}, URL = {https://www-sop.inria.fr/asclepios/Publications/Herve.Delingette/rapport.picinbono.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Prima97a, OPTADDRESS = {}, AUTHOR = {Sylvain Prima}, MONTH = {September}, OPTNOTE = {}, SCHOOL = {université Paris-Dauphine}, TITLE = {Étude de la dissymétrie dans des images volumiques cérébrales}, TYPE = {Rapport de D.E.A.}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{film-sclerose-1997, AUTHOR = {Guillaume Calmon and Jean-Philippe Thirion}, HOWPUBLISHED = {Audiovisual material produced by INRIA audiovisuel}, OPTMONTH = {}, OPTNOTE = {}, TITLE = {Analyse d'images tridimensionnelles - Application à la sclérose en plaques}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {video}, URL = {http://www.inria.fr/multimedia/Videotheque/0-Fiches-Videos/382-fra.html}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{Declerck:Ercim:97, AUTHOR = {J. Declerck and J. Feldmar and N. Ayache}, HOWPUBLISHED = {ERCIM News No.31}, MONTH = {October}, OPTNOTE = {}, TITLE = {Studying the Heart Left Ventricular Motion with 4D Transformations}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{luc-art:98:1, AUTHOR = {L. Soler and G. Malandain and H. Delingette and J. Montagnat}, HOWPUBLISHED = {ERCIM News No.31}, MONTH = {October}, OPTNOTE = {}, TITLE = {Computerized anatomical segmentation of the liver from helical CT-Scanners}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, URL-PUBLISHER = {http://www.ercim.org/publication/Ercim_News/enw31/}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @UNPUBLISHED{guimond97.4, AUTHOR = {Alexandre Guimond}, MONTH = {May}, NOTE = {Proposition de thèse, université de Montréal, 67 pages}, TITLE = {Classification d'images anatomiques tridimensionnelles}, YEAR = {1997}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{bondiau96, OPTADDRESS = {}, AUTHOR = {P.-Y. Bondiau}, MONTH = {septembre}, OPTNOTE = {}, SCHOOL = {DEA de l'université de Toulouse III Paul Sabatier}, TITLE = {Reconstruction informatique du globe oculaire à partir des images scanner, IRM et du FO : utilisation pour le traitement des tumeurs oculaires}, TYPE = {Rapport de D.E.A.}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{gcalmon-stage-ing, OPTADDRESS = {}, AUTHOR = {G. Calmon}, MONTH = {September}, OPTNOTE = {}, SCHOOL = {École des Mines de Paris}, TITLE = {Détection et mesure de variation de volume de lésions cérébrales dans des images médicales 3D}, TYPE = {stage ingénieur de l'École des Mines de Paris}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Gonzalez:UJI:1996, OPTADDRESS = {}, AUTHOR = {González Ballester, M. A.}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {Universitat Jaume I}, TITLE = {Visualizador de Superficies Paramétricas con Texturas, Iluminación y Sombreado}, TYPE = {Degree Thesis}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{aguimond-stage-dea, OPTADDRESS = {}, AUTHOR = {A. Guimond}, MONTH = {June}, OPTNOTE = {}, SCHOOL = {université de Nice Sophia Antipolis}, TITLE = {Constitution et exploration automatique de bases de données d'images médicales tridimentionnelles}, TYPE = {rapport de DEA}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{krissian96, OPTADDRESS = {}, AUTHOR = {K. Krissian}, MONTH = {septembre}, OPTNOTE = {}, SCHOOL = {université de Paris IX}, TITLE = {Diffusion anisotrope d'images cérébrales 3D et segmentation matière blanche / matière grise}, TYPE = {Rapport de DEA}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Linguraru:BsC:96, OPTADDRESS = {}, AUTHOR = {M.G. Linguraru}, OPTMONTH = {}, OPTNOTE = {}, SCHOOL = {University of Coventry}, TITLE = {Graphic Tools under XWindow for Image Segmentation}, TYPE = {BSc Thesis}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Montagnat-DEA, OPTADDRESS = {}, AUTHOR = {J. Montagnat}, MONTH = {September}, OPTNOTE = {}, SCHOOL = {DEA de l'université d'Orsay et Ecole Normale Supérieure de Cachan}, TITLE = {Segmentation d'images médicales volumiques à l'aide de maillages déformables contraints}, TYPE = {Rapport de D.E.A.}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{epi-film2, AUTHOR = {N. Ayache and E. Bardinet and S. Benayoun and H. Delingette and G. Malandain and S. Fernández-Vidal and L. Soler and J. Montagnat and S. Cotin and G. Subsol and J.-P. Thirion}, HOWPUBLISHED = {Audiovisual material produced by INRIA audiovisuel}, OPTMONTH = {}, OPTNOTE = {}, TITLE = {Analysis of medical images : Registration, Atlas, Motion}, YEAR = {1996}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {video, simulation}, URL = {http://www.inria.fr/multimedia/Videotheque/0-Fiches-Videos/397-fra.html}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{delingette_jfr95, AUTHOR = {F. Schikli and H. Delingette and B. Padovani and C. Maestro and N. Ayache and J.N. Bruneton}, HOWPUBLISHED = {Actes des Journées Française de la radiologie (JFR'95)}, MONTH = {October}, OPTNOTE = {}, TITLE = {Tomodensimétrie et volumétrie tumorale}, YEAR = {1995}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {workshop, medical}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{epi-film, AUTHOR = {N. Ayache and E. Bardinet and S. Benayoun and I. Cohen and L.D. Cohen and H. Delingette and J. Feldmar and C. Nastar and G. Subsol and J.-P. Thirion}, HOWPUBLISHED = {Audiovisual material produced by INRIA audiovisuel}, OPTMONTH = {}, OPTNOTE = {}, TITLE = {Non Rigid Motion (Tracking, Analysis and Simulation)}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {video, reconstruction}, URL = {http://www.inria.fr/multimedia/Videotheque/0-Fiches-Videos/252-fra.html}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{film-sclerose-1994, AUTHOR = {Jean-Philippe Thirion}, HOWPUBLISHED = {Audiovisual material produced by INRIA audiovisuel}, OPTMONTH = {}, OPTNOTE = {}, TITLE = {Fully automatic registration multiple sclerosis study}, YEAR = {1994}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {video}, URL = {http://www.inria.fr/multimedia/Videotheque/0-Fiches-Videos/260-fra.html}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Cotin93, OPTADDRESS = {}, AUTHOR = {Stéphane Cotin}, OPTMONTH = {}, NOTE = {D.E.A. Théorie et Applications de la Vision Artificielle}, SCHOOL = {Université de Nice, Sophia-Antipolis}, TITLE = {Découpe de Surfaces à l'aide d'un Système de Réalité Virtuelle}, OPTTYPE = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Declerck93, OPTADDRESS = {}, AUTHOR = {Jérôme Declerck}, MONTH = {juin}, OPTNOTE = {}, SCHOOL = {École Centrale de Paris}, TITLE = {Approximation de déformations géométriques par des B-Splines}, TYPE = {rapport de stage de fin d'études}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{vidal93, OPTADDRESS = {}, AUTHOR = {S. Fernàndez-Vidal}, MONTH = {september}, NOTE = {(in french)}, SCHOOL = {Université de Nice-Sophia Antipolis}, TITLE = {Mise en correspondance d'images médicales 3D}, TYPE = {Rapport de DEA}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{fernandez93, OPTADDRESS = {}, AUTHOR = {Sara Fernàndez-Vidal}, OPTMONTH = {}, NOTE = {D.E.A. Théorie et Applications de la Vision Artificielle}, SCHOOL = {Université de Nice Sophia-Antipolis}, TITLE = {Recalage d'images médicales multidimensionnelles : une approche mécanique}, TYPE = {Rapport de D.E.A.}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Fidrich93, OPTADDRESS = {}, AUTHOR = {Marta Fidrich}, MONTH = {août}, OPTNOTE = {}, SCHOOL = {Univ. Paris XI}, TITLE = {Analyse Multi-échelle de Points Extrémaux}, TYPE = {rapport de stage de DEA}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Kvedarauskas93, OPTADDRESS = {}, AUTHOR = {Donatas Kvedarauskas}, MONTH = {août}, OPTNOTE = {}, SCHOOL = {Université Paris XI}, TITLE = {Recalage rigide d'images 3D basé sur l'utilisation des conditions de compatibilité. Recalage de surfaces en utilisant des points de la surface et des points extrémaux}, TYPE = {rapport de stage de D.E.A.}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Pennec:DEA:93, OPTADDRESS = {}, AUTHOR = {Xavier Pennec}, MONTH = {July}, OPTNOTE = {}, SCHOOL = {DEA Informatique, Mathématique et Applications, École Polytechnique, ENS Ulm}, TITLE = {Traitement de l'erreur dans les méthodes de Hachage géométrique et d'Alignement, une étude théorique}, TYPE = {Rapport de DEA}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {registration, matching, uncertainty}, URL = {https://www-sop.inria.fr/asclepios/Publications/Xavier.Pennec/Pennec-DEA-report.pdf}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{Pignon93, OPTADDRESS = {}, AUTHOR = {Jérôme Pignon}, OPTMONTH = {}, NOTE = {D.E.A. Théorie et Applications de la Vision Artificielle}, SCHOOL = {Université de Nice, Sophia-Antipolis}, TITLE = {Maillages Simplexes Volumiques. Application à la simulation de Muscles}, OPTTYPE = {}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{delingette-film, AUTHOR = {Hervé Delingette and Jérôme Pignon and Stéphane Cotin and Gérard Subsol}, HOWPUBLISHED = {Audiovisual material produced by INRIA audiovisuel}, MONTH = {October}, OPTNOTE = {}, TITLE = {Cranio-facial Surgery Modeling}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{slides-hohiji, AUTHOR = {H. Delingette and H. Watanabe}, OPTHOWPUBLISHED = {}, INSTITUTION = {ACM SIGGRAPH 93 Slides}, OPTMONTH = {}, NOTE = {Slides 11-13 selected at the ACM SIGGRAPH 93 Slides}, TITLE = {Simplex Mesh Modeling}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, KEYWORDS = {video, reconstruction}, OPTURL = {}, URL-PUBLISHER = {http://siggraph.org/publications/slide-set/siggraph93/technical/Slides.01-78.html}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{nastar-film, AUTHOR = {Chahab Nastar}, HOWPUBLISHED = {Audiovisual material produced by INRIA audiovisuel}, MONTH = {June}, OPTNOTE = {}, TITLE = {Non-rigid motion analysis in medical images}, YEAR = {1993}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MASTERSTHESIS{bardinet:dea:1992, OPTADDRESS = {}, AUTHOR = {E. Bardinet}, MONTH = {Septembre}, OPTNOTE = {}, SCHOOL = {Université de Paris Dauphine}, TITLE = {Contour actifs et approximation de surface. Contraintes différentielles dans les modèles numériques de terrain}, TYPE = {Rapport de DEA}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, OPTURL = {}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} } @MISC{FilmEpi92, AUTHOR = {S. Dewez and B. Hidoine}, HOWPUBLISHED = {Audiovisual material produced by INRIA audiovisuel}, OPTMONTH = {}, OPTNOTE = {}, TITLE = {A l'image de l'homme}, YEAR = {1992}, OPTABSTRACT = {}, OPTDOI = {}, OPTISBN = {}, OPTISSN = {}, OPTKEYWORDS = {}, URL = {http://www.inria.fr/multimedia/Videotheque/0-Fiches-Videos/205-fra.html}, OPTURL-PUBLISHER = {}, X-PAYS = {}, OPTX-SCIENTIFIC-POPULARIZATION = {}, OPTHAL-DATE-DEPOT = {}, OPTURL-HAL = {}, OPTX-ID-HAL = {}, OPTHAL-VERSION = {}, X-LANGUAGE = {} }