The Virtual Plants is an INRIA project-team, joint with CIRAD and INRA. It is located at UMR AGAP, Montpellier, France. The long-term focus of the project is to study plant development and its control by genetic processes.

Motivation: Plants are branching living organisms that develop throughout their lifetimes. Organs are created by small embryogenetic regions at the tip of each axis, called apical meristems . In the project Virtual Plants, we are interested in studying plant apical meristem functioning and development. We believe that a detailed analysis of apical meristem processes, based on advanced mathematical and computational methods and tools, will lead us to get a deeper and better understanding of plant development.

Biological keywords: Plant development, branching systems, plant architecture analysis, plant geometry and topology, branching patterns, meristems, growth, vegetal tissues, hormones, auxine fluxes, meristem physiological states, shoots, roots.

Mathematical keywords: Developmental processes, dynamic systems with dynamic structures (DS)2, stochastic processes, Markov processes, transport processes, partial differential equations, mechanical models, L-systems, MGS, plant and fractals, tree-graph comparison, self-similarity in trees, tree compression, multiscale structures and analysis, 3D imaging.

News

  • 15/11/11 : Defense of Yassin Refahi's PhD thesis , at 2pm, IRD Montpellier.
  • 14-15/06/11 : First OpenAlea Days in Agropolis, Montpellier.
  • 30/04/11 : E. Moscardi finished his contract with us on Mars-Alt.
  • 12/04/11 : F. Boudon is visiting P. Prusinkiewicz's lab in Calgary, Canada for 3 weeks.
  • 12/04/11 : D. Fumey successfully defended his PhD thesis on “Modelling pruning effect on apple tree”.
  • 17-18/03/11 : Agropolis seminar on plant modelling.

Previous News

Recent publications

Publications in 2012
C. La Rota, J. Chopard, P. Das, S. Paindavoine, F. Rozier, E. Farcot, C. Godin, J. Traas, F. Monéger
The Plant Cell - 2012
 
Publications in 2011
Y. Refahi, E. Farcot, Y. Guédon, F. Besnard, T. Vernoux, C. Godin
22nd Annual Symposium on Combinatorial Pattern Matching, Palermo, Italy, Volume 6661, page 323--335 - 2011

O. Taugourdeau, F. Chaubert - Pereira, S. Sabatier, Y. Guédon
Journal of Experimental Botany, Volume 62, Number 15, page 5283-5296 - 2011




J. Guenard, G. Morin, F. Boudon, P. Gurdjos, V. Charvillat
Orasis - Congrès des jeunes chercheurs en vision par ordinateur - 2011

International Congress on Modelling and Simulation - 2011

L. Han, J.-C. Soulié, F. Boudon, D. Da Silva, T. Cokelaer, C. Pradal, L. Rouan, E. Costes
9th International Symposium on Modelling in Fruit Research and Orchard Management - 2011

T. Vernoux, G. Brunoud, E. Farcot, V. Morin, H. Van den Daele, J. Legrand, M. Oliva, P. Das, A. Larrieu, D. Wells, Y. Guédon, L. Armitage, F. Picard, S. Guyomarch, C. Cellier, G. Parry, R. Koumproglou, J. Doonan, M. Estelle, C. Godin, S. Kepinski, M. Bennett, L. de Veylder, J. Traas
Molecular Systems Biology, Volume 7, Number 508 - 2011


 
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