We have also a PET image of 7 slices of 256x256 pixels of the same patient (the voxel size is 1x1x9 mm) with an inter-slice distance of 3 mm. These data are obviously anisotropic. The brain is segmented by a single threshold of this image.
After registration, we resampled the MR data to present the MR slices corresponding to the PET ones.
We extracted the edges of two of these resampled MR slices and superimposed them on the PET slices:
Images are courtesy of Dr. Jael Travere of Cyceron center (CEA, Caen, France).
See the related publications for details.